mRNA_H-elongata_contig75308.15213.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: D8LIW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIW5_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.340e-65 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 1 RDRFDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKVFFDAKVVLERQE-LSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSSRQAKRKGGS 417
R RF+K+FHVSPFMSMKHTYDW+FT P GSGL AQTTLLE+ SGKVFFDAK+VL RQ SAA LCW + YP+YTVWVQ+ IH++AFRLWWK+VP+FPHPEG ET +SRLV +MTPLFNAQEAW R+ +R+ GS
Sbjct: 280 RYRFEKDFHVSPFMSMKHTYDWKFTAPDASPGSGLMAQTTLLESGSGKVFFDAKLVLRRQPCFSAAALCWHMTAYPLYTVWVQVLIHYQAFRLWWKQVPFFPHPEGAETAASRLVAVVMTPLFNAQEAWDRRKRRRQSGS 419
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S1YUS7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YUS7_TRICV) HSP 1 Score: 121 bits (304), Expect = 1.030e-31 Identity = 65/139 (46.76%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 10 FDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKVFFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSSRQAKRKGGSHNK 426
FDK FHVSPFM M H YDW F P+ S L TT+++ G+ FF+A + RQ + RLCW L P Y +QI+IH EAFR++ K V + PHPEGTET +S+++G MM P F A + W +R+GG NK
Sbjct: 90 FDKTFHVSPFMEMDHVYDWTFWHPR---RSRLVVSTTMIQR--GEKFFNAYFDVRRQPFTPLRLCWQLIRLPAYCAVIQIWIHIEAFRVFMKGVEFVPHPEGTETGASQIIGRMMVPFF-AVKGWVD---ERRGGKGNK 219
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S3UM40_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM40_HETAK) HSP 1 Score: 111 bits (278), Expect = 3.360e-28 Identity = 57/126 (45.24%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 7 RFDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKV---FFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQ 375
RF K FHVSPFM M H Y WRF PP G+ L +++ + G V +FDA +V R L+A +L +L YP Y VQ IH +AF+LW+K V ++PHPEG ET +S+ + +M PLF Q
Sbjct: 58 RFPKRFHVSPFMDMGHDYYWRFGPP----GAALRVLNRMIKQQEGGVDETWFDATLVARRAPLTALQLARYLLLYPAYCWTVQWQIHVQAFKLWYKGVTFYPHPEGAETTASKAIAFLMAPLFKLQ 179
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S2UX44_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX44_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.620e-27 Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 7 RFDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLE---AESGKVFFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSS 390
RF K+FHVSPFM M H Y WRF+ P+ L +T +++ AE GK++FDA + LE+ L+A L + L P + +QI IH EA +L++K VP+ PHP+G+ET +SR +G MM P+F + W S
Sbjct: 78 RFSKDFHVSPFMDMSHLYHWRFSLPE----KKLWVKTAMIKQGGAEDGKLYFDALLTLEKVPLTAWGLLYQLIRLPCQCMLIQILIHIEALQLFFK-VPFVPHPQGSETATSRAIGLMMAPVFWVVQLWPS 203
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A6T6SSD9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6SSD9_9EUKA) HSP 1 Score: 108 bits (271), Expect = 3.690e-27 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 10 FDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKVFFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLF 366
F K+FHVSPFM M H+YD+ F P G+ L T++ + + K +F A + L R+E + L +P T+++Q+ IH+EA R+W K VP+ PHPEGT+T++S ++GAMMTPLF
Sbjct: 38 FKKDFHVSPFMDMHHSYDFSFHSP----GNTLQVNTSMFKED--KRWFSATLKLRRREWRWWNMLMLLVYFPWMTIYIQVLIHWEAVRIWRKGVPFHPHPEGTQTWASVIIGAMMTPLF 150
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S0AVW3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AVW3_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.070e-26 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 10 FDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKV-FFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSSRQAKRK 408
F+K FHVSPFM+M H YDW F P+ D + T++++ G+V +F+A + RQ + RLC+ L P+Y +QI+IH EAF L++K V + PHPEG+ET +S+++ +MTP F A++ W SR+ K
Sbjct: 146 FNKAFHVSPFMTMDHMYDWTFWAPRHD---RIAVSTSMIKG--GRVPYFNAYFDIRRQPFTPFRLCFQLVRMPVYCAIIQIWIHIEAFWLFFKGVEFIPHPEGSETAASQIIAKLMTPFFIAKD-WLSREMSTK 273
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A836CG36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG36_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.060e-25 Identity = 60/134 (44.78%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 1 RDRFDKEFHVSPFMSMKHTYDWRFTPPKV--------DIGSGLTAQTTLLEAESGKVFFDAKVVLERQE-LSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQ 375
R RF K FHVSPFM M+HTYDW FT P+ L + +L+ G ++F A++ L R+ L+AA L LA YP YT VQ IH++A RLW K+VP+F HP+ ET +SR + A M PL+ Q
Sbjct: 186 RYRFAKAFHVSPFMDMEHTYDWSFTAPRAAXXXXXXXXXXXXLRVRNAMLKG--GVLWFSARLALPRRRALTAAALLAHLAAYPAYTAAVQARIHWQALRLWRKRVPFFAHPDARETRASRAIAAAMAPLWALQ 317
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S0AWL6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWL6_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.250e-25 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 10 FDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKV-FFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSSRQAKRK 408
F+K FHVSPFM+M H YDW F P+ D + T++++ G+V +F+A + RQ + RLC+ L P+Y +QI+IH EAF L++K V + PHPEG+ET +S+++ +MTP F A++ W SR+ K
Sbjct: 308 FNKAFHVSPFMTMDHMYDWTFWAPRHD---RIAVSTSMIKG--GRVPYFNAYFDIRRQPFTPFRLCFQLVRMPVYCAIIQIWIHIEAFWLFFKGVEFIPHPEGSETAASQIIAKLMTPFFIAKD-WLSREMSTK 435
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A1Z5K044_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K044_FISSO) HSP 1 Score: 107 bits (267), Expect = 3.040e-25 Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 10 FDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAES----GKVFFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLFNAQEAWSSRQAKRK 408
F K+FHVSPFM M + YDW F K+D T T + E S ++ F AK+ +ER+ L +L ++ T+P+Y + +Q++IH+EAFRL+ K V + PHP+GTET++SR +G M PLF QE + + K K
Sbjct: 198 FPKQFHVSPFMEMSYKYDWTFAE-KLD-----TTVTIINEMRSLTDHNQLCFRAKMQVERKSLHPLQLALYVTTFPIYCLIIQLWIHYEAFRLFLKGVTFQPHPDGTETWASRAIGNAMRPLFALQEYYDAFSKKPK 328
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Match: A0A7S4DGV5_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DGV5_9EUKA) HSP 1 Score: 105 bits (263), Expect = 1.460e-24 Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 1 RDRFDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKVFFDAKVVLERQELSAARLCWFLATYPMYTVWVQIFIHFEAFRLWWKKVPYFPHPEGTETFSSRLVGAMMTPLF 366
R F+K FHVSPFM M+HTY++ F PK L T++ + E + +F A + + EL+ L + L YP TV++Q+ IH+EA +LW KKVP+ PHPEGT++ +S ++G +MTP F
Sbjct: 202 RYAFEKTFHVSPFMDMEHTYEFSFHSPK----ETLQINTSMFKDE--QKWFSATLRMNAMELTWLNLAYLLLYYPFLTVYIQMIIHWEALKLWRKKVPFHPHPEGTKSSASVIIGWIMTPFF 317 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75308.15213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75308.15213.1 >prot_H-elongata_contig75308.15213.1 ID=prot_H-elongata_contig75308.15213.1|Name=mRNA_H-elongata_contig75308.15213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp RDRFDKEFHVSPFMSMKHTYDWRFTPPKVDIGSGLTAQTTLLEAESGKVFback to top mRNA from alignment at H-elongata_contig75308:435..1893+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75308.15213.1 ID=mRNA_H-elongata_contig75308.15213.1|Name=mRNA_H-elongata_contig75308.15213.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1459bp|location=Sequence derived from alignment at H-elongata_contig75308:435..1893+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75308:435..1893+ >mRNA_H-elongata_contig75308.15213.1 ID=mRNA_H-elongata_contig75308.15213.1|Name=mRNA_H-elongata_contig75308.15213.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig75308:435..1893+ (Himanthalia elongata Himel1 dioecious)back to top |