mRNA_H-elongata_contig74971.15174.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: D8LJX2_ECTSI (Farnesyltransferase, CAAX box, alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX2_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.970e-46 Identity = 105/168 (62.50%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 112 QWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLW--TVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKTARSLQMTDLGAKSPHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETRLRSVTRR 609
QWLL+EF +LDT+EGR EXXXXXXXXXXXXXXXXXXXXX F++H++LG L V+SEL YALG+A+ APSNESPWN++R FFR R+Y +FPEV+ A +LQ T+ GAKSPHV SLL E+YE+EGTE++L +AI Q LR+ LD VR +YWE+RLR+ R
Sbjct: 148 QWLLQEFRMLDTQEGRNLEXXXXXXXXXXXXXXXXXXXXXWFVMHSALGTKGSLSDEAVKSELAYALGYAKTAPSNESPWNYLRAFFRTGGRAYKDFPEVKGAALALQKTEAGAKSPHVFSLLAEVYEKEGTEDSLKKAIAAFQHLRDTLDEVRARYWESRLRAAATR 315
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A835YWW6_9STRA (Farnesyltransferase, CAAX box, alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWW6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.680e-20 Identity = 89/230 (38.70%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 1 YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEF----------------------------CLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKTARSLQMTDLGAKS-PHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETRLRSVT 603
Y RR L + +EL YV V +PKNY W HR ++++ XXXXXXXXXXXXXXXXXXXXX F++H + G V +E +AL RA NES WN++RG+ V S+ P+V+ + L GA H+H+LL E +EQEGTEE+LN AI +LQ+LRN++D VR KYW+ R+ T
Sbjct: 77 YRRRCLFALNKDLAEELSYVRDVALSNPKNYQIWYHRXAVVEQLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWFVIH-NAGVAVTAEAVAAEAEFALRHIERAVHNESAWNYLRGYL-VDGASFDKHPQVKAHCQKLLAEHSGAADCAHLHNLLAEAHEQEGTEESLNTAIELLQKLRNDIDPVREKYWDRRIARAT 304
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A137QXY1_9AGAR (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137QXY1_9AGAR) HSP 1 Score: 87.4 bits (215), Expect = 6.130e-17 Identity = 63/217 (29.03%), Postives = 98/217 (45.16%), Query Frame = 1
Query: 1 YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHAS---LGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKT------ARSLQMTDL-------GAKSPHVHSL--LTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETRLRS 597
+HRR L EL +++R + DPKNYH WS+RQWLL F +D E+ + E F++ GQ + V+ EL + AP+N S WN++RG Y+ + K + DL GA+ P V+++ L +IYEQ G ++ + +A+ + + L NE D +R KYW+ R+R
Sbjct: 120 HHRRLLLTQLRTPLPELRFIERCLQVDPKNYHTWSYRQWLLSHF--VDDEDLWKGELDFIENAIGDDVRNNSAWHHRHFVVFGCGVRAGQEDRARVVKRELIFTKQNISLAPNNPSAWNYLRGILDHPKLPYSLLTQFVKPYTVPLDPNVADIVDLENPPPMKGAELPCVYAIEFLADIYEQAGDKDNILKAVELWKLLANEHDTIRRKYWDHRIRE 334
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: E4ZG15_LEPMJ (Similar to protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit n=2 Tax=Leptosphaeriaceae TaxID=34374 RepID=E4ZG15_LEPMJ) HSP 1 Score: 86.3 bits (212), Expect = 1.840e-16 Identity = 76/196 (38.78%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 1 YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKTARSLQMTDLGAKSPHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETR 588
+HR + + G+ E E++D+++ D KNYH WS+RQWL+K F L D E E XXXXXXXXXXXXXXXXXXX + +E + V+ E+ Y R+AP N+SPWN+V G R A + + +Q + S H LL +IY +E E + EA L L + D +R YW R
Sbjct: 153 HHRHTIIDALGSPEGEAEFIDKMLEQDSKNYHVWSYRQWLVKRFDLFDKPE--ELEWTHXXXXXXXXXXXXXXXXXXXVVEGRKGKPSEDI--VQREIEYTKSAIRKAPQNQSPWNYVLGIVRAAGMPKSTLKDFALEFADVQRPE-EVYSSHALDLLADIYAEE--ENSKEEARKALDLLATKYDPIRASYWNFR 341
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A7S2Y1S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.010e-16 Identity = 78/168 (46.43%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 28 RGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRS-------EXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVA-ARSYANFPEVEKTARSLQMTDLGAKSP--HVHSLLTEIYEQEGT 501
R G ELE++ V+A+D KNYHAWS+RQ++L + + + G + EXXXXXXXXXXXXXXXXXXXXXXF++H S Q ++SE+ YAL + AP+NESPW+++RG+F A A SY+ P+++ A L+ ++ G + P H H LL +I QEG+
Sbjct: 2 RDGLGAELEFIGNVLAEDAKNYHAWSYRQYVLLQHSS-EAQAGEEAVAEMWSQEXXXXXXXXXXXXXXXXXXXXXXFVVH-SRPQPVTPEVLQSEVEYALKYIAMAPNNESPWSYLRGYFHGANAFSYSECPDLK--AACLRWSE-GPEDPSVHAHCLLLDILSQEGS 164
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A7S1Y693_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y693_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.010e-16 Identity = 62/213 (29.11%), Postives = 100/213 (46.95%), Query Frame = 1
Query: 46 ELEYVDRVVAD-DPKNYHAWSHRQWLLKEFCLLDT--EEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGL--WTVRSELTYALGFARRAPSNESPWNFVRGFFRVAAR-----SYANFPEV------EKTARSLQMTDLGAKSP----HVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYW--------ETRLRSV 600
+LEYV +++ D KNYHAWSHRQWLL + T E+ R E FI H + + + L T R E+ YALG A+ P NESPW ++ G + + + ++F E+ E + Q+ + P +++S L ++ E + T ++L EA+ + Q + + D +R KYW ET+L+ +
Sbjct: 39 DLEYVSKILQQHDGKNYHAWSHRQWLLGHLMSMSTKDEDVRTKELKFLEKLLTQDVRNNSAWNQRWFITHFNHNKRQPLDSATARIEVEYALGQAKLDPYNESPWRYLIGVLKEQQKKKGDDTTSSFYELVQYAYTESITTTKQVLVSAERDPEGCANLNSALMDLLEFQQTPQSLEEALRLCQEMATKHDTIRAKYWTHVRTKELETKLKEI 251
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A7R7XM58_9EURO (CAAX geranylgeranyltransferase alpha subunit n=3 Tax=Aspergillus TaxID=5052 RepID=A0A7R7XM58_9EURO) HSP 1 Score: 83.6 bits (205), Expect = 1.560e-15 Identity = 58/208 (27.88%), Postives = 89/208 (42.79%), Query Frame = 1
Query: 43 KELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDT--EEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLW--------------TVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPE------VEKTARSLQMTDLGAKSPHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETRLRSV 600
KE++++ + A D KNYH W++R WL++ F L D+ E + G G +V EL YA RAP N SPW++ RG R A R + + + ++K Q+ D+ KS H L ++Y Q GT A +EAI +L L+++ D +R YW R+ S+
Sbjct: 131 KEMDFLMEMFAQDSKNYHVWTYRHWLVRHFGLWDSPREIADVNSLLNSDLRNNSAWNHRYMLRFGPRSEEPDAGMVHGSGPPAKKGRHDVVDEDSVDEELQYAQEQIVRAPENRSPWSYARGVIRAAGRPLSEWKDFTQKFVIDKRDGQGQLVDVEVKSSHAVEWLADVYAQGGT--APDEAIRMLNLLKDKYDPIRKNYWNYRIESI 336
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A6A5KLF9_9PLEO (Protein prenylyltransferase n=1 Tax=Decorospora gaudefroyi TaxID=184978 RepID=A0A6A5KLF9_9PLEO) HSP 1 Score: 83.6 bits (205), Expect = 1.720e-15 Identity = 69/196 (35.20%), Postives = 96/196 (48.98%), Query Frame = 1
Query: 1 YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKTARSLQMTDLGAKSPHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETR 588
+HR + + G+ E E++ +V D KNYH WS+RQWL+K F L D E E XXXXXXXXXXXXXXX+++ E+ Y R+AP N+SPWN++ G R A + + +Q D S H LL +IY +E E + +A L+ L + D +R YW R
Sbjct: 156 HHRHTMIDALGSPDGEPEFISAMVELDSKNYHVWSYRQWLVKRFDLFDKPE----ELAWTHGMXXXXXXXXXXXXXXXYLVVGGREGKPSADIANREIEYTKAAIRKAPQNQSPWNYILGILRAAELPKSTLKDFATEFADVQNPD-HVHSSHALDLLADIYAEE--ESSKEKAAKALELLATKYDPIRANYWNFR 344
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A7S4S4X0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S4X0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.650e-15 Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = 1
Query: 37 AGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQT--EGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVA----------------ARSYANF--PEVEKTARSLQMTDLGAKS-PHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETRLRSVTRR 609
A +EL Y++ V+ +D KNYHAWSHRQW+L+ C + S XXXXXXXXXXXXXXXXXXXXXX I H + L V+ E+TYA+ A P NESPW +V GF +S N E+ K +L T+ S H+ S +I E +G + +L +A N+ + L E D++R KYW+ R + + R
Sbjct: 154 AKEELNYINGVLENDGKNYHAWSHRQWVLRTICFPPSIYN--SXXXXXXXXXXXXXXXXXXXXXXXXITHKGCTRKPLSSLEDVQKEITYAMQCAEVDPFNESPWRYVIGFLEECKKYSGSEGNDVMEAADVKSLINSCEQEITKMRGNLGSTEYDVDSCVHLTSAKIDILEMKGDDISLEQAANLAKDLETEHDLIRKKYWKLREKEIRSR 363
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Match: A0A6A5QZC6_AMPQU (Farnesyltransferas-like protein n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5QZC6_AMPQU) HSP 1 Score: 81.6 bits (200), Expect = 8.140e-15 Identity = 73/196 (37.24%), Postives = 97/196 (49.49%), Query Frame = 1
Query: 1 YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEEGRRSEXXXXXXXXXXXXXXXXXXXXXXFILHASLGQTEGLWTVRSELTYALGFARRAPSNESPWNFVRGFFRVAARSYANFPEVEKTARSLQMTDLGAKSPHVHSLLTEIYEQEGTEEALNEAINVLQRLRNELDVVRVKYWETR 588
+HR + + G++ E E++ ++ D KNYH WS+RQWL+K F L + E E XXXXXXXXXXXXXXXXXX + G + E+ Y R+AP N+SPWN+V G R A + + L D S H LL +IY +E +A EA L L D +R YW R
Sbjct: 151 HHRHTIIDALGSSEGEPEFISTMLEQDSKNYHVWSYRQWLVKRFDLFEEPE----ELEWTXXXXXXXXXXXXXXXXXXXXVVGGRGGKPSEDLAKREIEYTKAAIRKAPQNQSPWNYVSGVLRAAQLPKSTIKDFALEFADLDRPD-EVYSSHALDLLADIYAEEENSKA--EAEKALNLLATRYDPIRANYWNFR 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74971.15174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74971.15174.1 >prot_H-elongata_contig74971.15174.1 ID=prot_H-elongata_contig74971.15174.1|Name=mRNA_H-elongata_contig74971.15174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp YHRRALSEYRGNAGKELEYVDRVVADDPKNYHAWSHRQWLLKEFCLLDTEback to top mRNA from alignment at H-elongata_contig74971:767..2943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74971.15174.1 ID=mRNA_H-elongata_contig74971.15174.1|Name=mRNA_H-elongata_contig74971.15174.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2177bp|location=Sequence derived from alignment at H-elongata_contig74971:767..2943- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74971:767..2943- >mRNA_H-elongata_contig74971.15174.1 ID=mRNA_H-elongata_contig74971.15174.1|Name=mRNA_H-elongata_contig74971.15174.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig74971:767..2943- (Himanthalia elongata Himel1 dioecious)back to top |