mRNA_H-elongata_contig74175.15110.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: D8LRL2_ECTSI (Pterin-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL2_ECTSI) HSP 1 Score: 204 bits (520), Expect = 2.730e-60 Identity = 104/160 (65.00%), Postives = 119/160 (74.38%), Query Frame = 1
Query: 1 RSLATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSR-------SRHRWLNVPHPVMHERPFVLLPLVDIEPDL 459
RSLATVYLGLGSNVG+R AN+L+A+KGLRE G+VDA S LYET PMYVEDQP FLNAACRLST+LGP LL+R+K LEA++GR RWGPRAVD+DILLYD LV++G D RWL +PHP MHERPFVLLPL DI+PDL
Sbjct: 58 RSLATVYLGLGSNVGDRHANLLRAFKGLREFGEVDATSLLYETPPMYVEDQPWFLNAACRLSTDLGPAVLLERLKVLEAAVGRKDTARWGPRAVDVDILLYDDLVLDGGDXXXXXXXXXXXXXXXXXXXXQSKRWLRIPHPRMHERPFVLLPLADIQPDL 217
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A6H5JPW0_9PHAE (HPPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW0_9PHAE) HSP 1 Score: 172 bits (437), Expect = 3.610e-52 Identity = 86/121 (71.07%), Postives = 98/121 (80.99%), Query Frame = 1
Query: 1 RSLATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGG 363
RSLATVYLGLGSNVG+R AN+L+AYKGLRE G+VDA S LYET PMYVE+QP FLNAACRLST+L P LL+R+K LEA++GR RWGPRAVD+DILLYD LV+ DG NG DGG
Sbjct: 59 RSLATVYLGLGSNVGDRHANLLRAYKGLREFGEVDATSLLYETPPMYVENQPWFLNAACRLSTDLAPAVLLERLKALEAAVGRKDTARWGPRAVDVDILLYDDLVL---DGGNGGDGDDGG 176
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A7C9QTC8_9PROT (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9QTC8_9PROT) HSP 1 Score: 146 bits (369), Expect = 4.040e-42 Identity = 74/150 (49.33%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDIEPD 456
+ATV+LGLG+N+G+R AN+ A L +L ++DA S +YETAP+YV DQP FLN A R++T L P DLL +K LE +GRV VR+GPR +D+DILLYDG+V++ D L +PHP +HER F L+PL DI D
Sbjct: 1 MATVFLGLGTNLGDRAANLRTALTALSDLARIDAVSAIYETAPLYVLDQPAFLNMAVRVTTPLSPRDLLIELKALENELGRVASVRYGPRLIDLDILLYDGVVMDDSD------------------LTIPHPRLHERRFALVPLADIAAD 132
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A6J4FZ64_9PROT (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=2 Tax=Magnetospirillum TaxID=13134 RepID=A0A6J4FZ64_9PROT) HSP 1 Score: 143 bits (360), Expect = 1.090e-40 Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDI 447
+A VYLGLG+N+G+RPAN+ A L LG+V+A S +YET P+YV DQP FLN A RLST L P LL +KRLEA+IGRV VR+GPR +D+DILLYD +V++ D L +PHP + ER F L+PL DI
Sbjct: 1 MAIVYLGLGTNLGDRPANLRAAIDALGALGRVEARSKVYETQPLYVTDQPAFLNMAVRLSTTLTPPALLAELKRLEAAIGRVASVRYGPRLIDLDILLYDDMVIDSPD------------------LVIPHPRLTERHFALIPLADI 129
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: UPI0019B84219 (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019B84219) HSP 1 Score: 142 bits (359), Expect = 1.330e-40 Identity = 74/147 (50.34%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDI 447
+ATV+LGLG+N+G RPAN+ A L ELG+V+A S ++ETAP+YV DQP FLN A +L T L P +LL +K LE +GRV VR+GPR +D+DILLYD +V+N QD L +PHP +HER F L+PLV++
Sbjct: 1 MATVFLGLGTNLGNRPANLTAAIAALSELGEVEACSRIFETAPLYVTDQPAFLNMAVKLRTALAPRELLAALKSLEDELGRVASVRYGPRLIDLDILLYDDVVLN----------QD--------VLTIPHPRLHERRFALVPLVEL 129
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: UPI0019CDF015 (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019CDF015) HSP 1 Score: 137 bits (345), Expect = 1.700e-38 Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDIEPDL 459
+ATV+LGLG+N+G+RP+N+ A L LG+V+A S ++ETAP+YV DQP FLN A ++ T L P DLL +K LE +GRV VR+GPR +D+DILLY +V++ H L +PHP +HER F L+PLV++ D+
Sbjct: 1 MATVFLGLGTNLGDRPSNLNAAIAALSGLGEVEACSRVFETAPLYVTDQPAFLNMAVKIRTMLAPRDLLAALKSLEDELGRVASVRYGPRLIDLDILLYGDVVLD------------------HDTLTLPHPRLHERRFALVPLVELAGDV 133
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A7C5YTZ1_9CHLR (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5YTZ1_9CHLR) HSP 1 Score: 137 bits (345), Expect = 2.490e-38 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 1
Query: 10 ATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDIEPDL 459
ATVYLGLGSN+G+R N+ +A L E+ ++A S +YETAP + +QP FLNA CR+ T L P LL+ +R+E ++GR + RWGPR VD+DIL YDGLV++ + L +PHP++HER FVL+PL +I P+L
Sbjct: 4 ATVYLGLGSNLGDRLGNLRRALAMLAEVASIEAVSSVYETAPWGMREQPFFLNAVCRVRTSLPPERLLEETQRIENALGRQRGERWGPRPVDLDILFYDGLVLDTPE------------------LALPHPLLHERAFVLVPLAEIAPEL 135
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: V6F038_MAGGM (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=3 Tax=Rhodospirillaceae TaxID=41295 RepID=V6F038_MAGGM) HSP 1 Score: 135 bits (341), Expect = 7.490e-38 Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDI 447
+A+VYLGLG+N+G+R AN+ A L LG++ S LYETAP+YV DQP FLN A L+T+L PLDLL R+K LE +GRV R+GPR +D+DILLYD +V++ H L +PHP + ER F L PL DI
Sbjct: 1 MASVYLGLGTNLGDRQANLRIAVDALARLGRIGDQSRLYETAPLYVTDQPAFLNMAVALATDLAPLDLLARLKGLEQELGRVASRRYGPRLIDLDILLYDDVVLD------------------HPDLTIPHPRLCERRFALAPLADI 129
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A1M3LW99_9PROT (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Magnetospirillum sp. 64-120 TaxID=1895778 RepID=A0A1M3LW99_9PROT) HSP 1 Score: 135 bits (339), Expect = 1.500e-37 Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDI 447
+A+V+LGLG+N+G+R N+ A K L LG V + S +YETAP+YV DQP FLN A RL T L PLDLL+ +K LE +GRV R+GPR +D+DIL+YDG+V+ E L++PHP + ER F L PL DI
Sbjct: 1 MASVFLGLGTNLGDRAGNLRMAVKALTGLGDVTSISRVYETAPLYVLDQPAFLNMAVRLETRLAPLDLLESLKDLEEELGRVASRRYGPRQIDLDILIYDGVVLETER------------------LSIPHPRLAERRFALAPLADI 129
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Match: A0A364NVX8_9PROT (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Magnetospirillum kuznetsovii TaxID=2053833 RepID=A0A364NVX8_9PROT) HSP 1 Score: 134 bits (336), Expect = 3.800e-37 Identity = 72/151 (47.68%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 7 LATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDQPRFLNAACRLSTELGPLDLLDRIKRLEASIGRVQDVRWGPRAVDIDILLYDGLVVNGEDGTNGSQAQDGGSRSRHRWLNVPHPVMHERPFVLLPLVDIEPDL 459
++ VYLGLG+N+G+R AN+ A K L L VDA S L+ETAP+YV DQP F N A T+L PLDLL +KRLE +GRV+ VR+GPR +D+DILLYDGL+++ + L +PHP + ER F L PL +I +L
Sbjct: 1 MSHVYLGLGTNLGDRAANLRAAIKALAPLMLVDAVSGLWETAPLYVTDQPAFYNMAVAGRTDLAPLDLLRGLKRLEDELGRVESVRFGPRLIDLDILLYDGLIMDEPE------------------LTIPHPRLPERRFALAPLAEIAAEL 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74175.15110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74175.15110.1 >prot_H-elongata_contig74175.15110.1 ID=prot_H-elongata_contig74175.15110.1|Name=mRNA_H-elongata_contig74175.15110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp RSLATVYLGLGSNVGERPANMLKAYKGLRELGKVDAASFLYETAPMYVEDback to top mRNA from alignment at H-elongata_contig74175:1785..3085+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74175.15110.1 ID=mRNA_H-elongata_contig74175.15110.1|Name=mRNA_H-elongata_contig74175.15110.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1301bp|location=Sequence derived from alignment at H-elongata_contig74175:1785..3085+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74175:1785..3085+ >mRNA_H-elongata_contig74175.15110.1 ID=mRNA_H-elongata_contig74175.15110.1|Name=mRNA_H-elongata_contig74175.15110.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig74175:1785..3085+ (Himanthalia elongata Himel1 dioecious)back to top |