mRNA_H-elongata_contig72940.14974.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.340e-47 Identity = 94/152 (61.84%), Postives = 100/152 (65.79%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGV-------------------IQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
QKFQYVVACQVYG+MKK QDPK DDIE+LLKRFPNLRV YIDEVR + S S K H Q+G IQEVYR+KLPGNPVVGEGKPE QNHA+IFTRGEHLQ IDMNQEGYFEEALKM
Sbjct: 1367 QKFQYVVACQVYGRMKKNQDPKADDIEILLKRFPNLRVAYIDEVRVSRDSTSSAQEYFSVLI-----------KAHDQRGQGDADGSKRGGGGAGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKM 1507
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A7S0CBG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBG7_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.920e-47 Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALK 396
+KF Y+V+CQVYG MKK QDPK DDIE L+ FP+LRV YID VR + GAS ++ + ++G IQE+YR++LPGNPV+GEGKPE QNHAIIF+RGE LQTIDMNQEGYFEEA+K
Sbjct: 39 EKFGYIVSCQVYGNMKKNQDPKADDIEQLMHHFPHLRVAYIDSVRLDRSGASVFYSVLV---------------KSDRQGSIQEIYRVRLPGNPVIGEGKPENQNHAIIFSRGEFLQTIDMNQEGYFEEAMK 155
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.550e-46 Identity = 87/132 (65.91%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 4 KFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
KFQYVVACQVYG+MKK QDPK DDI+ LLKRFPNLRV YIDEVR + G ++ K + Q I+EVYR+KLPGNPV+GEGKPE QNHAIIFTRGEH+Q IDMNQEGYFEEALKM
Sbjct: 1533 KFQYVVACQVYGRMKKIQDPKADDIDRLLKRFPNLRVAYIDEVRVTREGQCEYFSV------------LIKAKENGQS--IEEVYRVKLPGNPVIGEGKPENQNHAIIFTRGEHVQAIDMNQEGYFEEALKM 1650
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A1Z5JIZ9_FISSO (1,3-beta-glucan synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIZ9_FISSO) HSP 1 Score: 161 bits (408), Expect = 2.000e-43 Identity = 79/133 (59.40%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF YVV CQ+YGQMK+ QDPK DDI+ L+ RFP+LRV YID +R + GAS ++ + + KG IQE+YR++LPGNPV+GEGKPE QNHA+IFTRGE +QTIDMNQEGYFEEALKM
Sbjct: 1326 EKFGYVVTCQIYGQMKRNQDPKADDIDSLMHRFPHLRVAYIDSIRINRSGASVFYSVLV---------------KSNGKGKIQEIYRVRLPGNPVIGEGKPENQNHAMIFTRGEFVQTIDMNQEGYFEEALKM 1443
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A7S2JUC2_9STRA (Hypothetical protein n=3 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUC2_9STRA) HSP 1 Score: 157 bits (396), Expect = 8.190e-42 Identity = 79/133 (59.40%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF YVVACQVYG MKK QDPK DDIE L+ R+P++RV YID VR + G E+ S + + G IQEVYR++LPGNP++GEGKPE QNHAIIF+R E++QTIDMNQEGYFEEALKM
Sbjct: 725 EKFGYVVACQVYGNMKKNQDPKADDIEWLMHRYPHMRVAYIDSVRLNRAG---ESVFFSVLV------------KSNGNGEIQEVYRVRLPGNPIIGEGKPENQNHAIIFSRAEYVQTIDMNQEGYFEEALKM 842
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: D7FY26_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY26_ECTSI) HSP 1 Score: 155 bits (392), Expect = 2.820e-41 Identity = 82/135 (60.74%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGV----------IQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEG 375
QKFQYVVACQVYG+MKK QDPK DDI++LLKRFPNLRV YIDEVR + S S + ++ G IQEVYR+KLPGNPVVGEGKPE QNHA+IFTRGEHLQ IDMNQEG
Sbjct: 1258 QKFQYVVACQVYGRMKKNQDPKADDIQILLKRFPNLRVAYIDEVRVSRDSTSSAQEYFSVLIKAHDQRGQGDADGSTRGGXXXXVGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEG 1392
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A7S4EG16_9STRA (1,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG16_9STRA) HSP 1 Score: 154 bits (389), Expect = 7.280e-41 Identity = 78/133 (58.65%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF YVV+CQVYG MK+ QDPK DDI+ L+ R P+LR+ YID VR + GA+ ++ + KG I EVYR++LPGNPV+GEGKPE QNHA+IFTRGE LQTIDMNQEGYFEEALKM
Sbjct: 1326 EKFGYVVSCQVYGSMKRNQDPKADDIDALMHRHPHLRIAYIDSVRLNRDGAALYYSVLV---------------KSDGKGNILEVYRVRLPGNPVIGEGKPENQNHAMIFTRGEFLQTIDMNQEGYFEEALKM 1443
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A1E7FFZ9_9STRA (1,3-beta-glucan synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFZ9_9STRA) HSP 1 Score: 154 bits (389), Expect = 7.280e-41 Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF Y+++CQVYG MK+ QDPK DDIE L+ RFP+LRV YID +R + G TT+ + KG I EVYR++LPGNPV+GEGKPE QNHA+IFTR E LQTIDMNQEGYFEEALKM
Sbjct: 1338 EKFGYIISCQVYGNMKRNQDPKADDIEALMHRFPHLRVAYIDSIRLNRDG----TTVYYSVLV-----------KSDGKGKILEVYRVRLPGNPVIGEGKPENQNHAMIFTRSEFLQTIDMNQEGYFEEALKM 1455
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: A0A7S1FM30_9STRA (1,3-beta-glucan synthase n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FM30_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.920e-41 Identity = 80/133 (60.15%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF Y+VACQVYG MKK QD K DDIE L+ RFP++RV YID V++ + GAS T S + G IQEVYR++L GNPV+GEGKPE QNHAIIF+RGE +QTIDMNQEGYFEEALKM
Sbjct: 1299 EKFGYIVACQVYGNMKKNQDSKADDIERLMHRFPHMRVAYIDTVKHGRSGAS---TFYSVLV------------KSDGAGTIQEVYRVRLAGNPVLGEGKPENQNHAIIFSRGELVQTIDMNQEGYFEEALKM 1416
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 153 bits (387), Expect = 1.350e-40 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 1 QKFQYVVACQVYGQMKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESXXXXXXXXXXXTNPKRHSQKGVIQEVYRIKLPGNPVVGEGKPE*QNHAIIFTRGEHLQTIDMNQEGYFEEALKM 399
+KF Y+V+CQ+YG+MK+ QD K DDIE L+ RFP +RV YID +R + GAS ++ + ++G IQEVYR++LPG+PV+GEGKPE QNHA+IFTRGE++QTIDMNQEGYFEEALKM
Sbjct: 1308 EKFGYIVSCQMYGKMKRNQDSKADDIEALMHRFPLMRVAYIDNIRLNRSGASAFYSVLV---------------KSDRRGNIQEVYRVRLPGDPVLGEGKPENQNHAMIFTRGEYVQTIDMNQEGYFEEALKM 1425 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72940.14974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72940.14974.1 >prot_H-elongata_contig72940.14974.1 ID=prot_H-elongata_contig72940.14974.1|Name=mRNA_H-elongata_contig72940.14974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp MKKKQDPKVDDIEMLLKRFPNLRVDYIDEVRYIKGGASPETTMESTAEAEback to top mRNA from alignment at H-elongata_contig72940:2..1686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72940.14974.1 ID=mRNA_H-elongata_contig72940.14974.1|Name=mRNA_H-elongata_contig72940.14974.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1685bp|location=Sequence derived from alignment at H-elongata_contig72940:2..1686- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72940:2..1686- >mRNA_H-elongata_contig72940.14974.1 ID=mRNA_H-elongata_contig72940.14974.1|Name=mRNA_H-elongata_contig72940.14974.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig72940:2..1686- (Himanthalia elongata Himel1 dioecious)back to top |