mRNA_H-elongata_contig7269.14941.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7269.14941.1
Unique NamemRNA_H-elongata_contig7269.14941.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: D7G2E2_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E2_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.680e-127
Identity = 220/503 (43.74%), Postives = 310/503 (61.63%), Query Frame = 3
Query:  234 LPPKDETFSPQGALAELLAAP-VPPASCGRFDGVGKKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQ----EKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSA-DGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKE--------QPRPQPFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRLKMKANAT 1700
            LPP DET +P   + E+LAAP  P  +  RFDG+G  SGGIWRS V G +P+TV+      KWM ++EAAGN+   + ES  ++ G KA++++    + H  +   +  ALS KA+L+L P +EA++ +L +RWEE A +GQE+ M DD++ F+LE+I G   GDYAT R  +D  RLLPI + G+IS+P +   PLN LPM  F  S++AR++L  V++  + RR+ D A    +G  ++ GV+D F  ++ +Q    E A       DDDFI+DN + +LFGG DTT+  ++RI+Q LG+A DGK V+D+L  EL+    S +  L   + G  S G  ++ PL +A+ LES RL P   G+ RK  +  +YNGY IP G++I W+   G RA  LYPEPE FCPFRFLH G    D  SA           QP P  +GFG HMC GR+LAKLEM++F +  L +F+F++V+GQ F    P   PK +L++ LK K  AT
Sbjct:   54 LPPWDETSNPIATVREMLAAPDAPEDTPNRFDGIGGSSGGIWRSRVYGLLPATVIDAREGTKWMTKEEAAGNLYQDWLESTIQVVGEKAVSNLGTQHEVHTIVRRVYGEALSSKAVLRLQPLLEASLGRLVLRWEELAETGQELTMQDDLRRFSLESIAGAFFGDYATPRFIQDTGRLLPILSQGLISIPFRFPPPLNKLPMLGFGLSMDAREELKGVIRDALHRRRVDLASG--EGTSKNPGVLDSFFDLQDQQQMGAEGALDGSFSFDDDFIIDNGVVALFGGIDTTSVTLTRILQLLGTAEDGKEVMDQLIDELNNDATSGDIALEGGAAG--SVGTLESLPLFKALVLESTRLYPAIAGLSRKARKDFSYNGYLIPEGQTINWNLIHGSRAEKLYPEPEKFCPFRFLH-GDEKKDTDSAASPGTGARSPGQPIPPMWGFGKHMCPGRDLAKLEMVLFMKTFLPKFDFEVVEGQSFKSTLPTGGPKDKLRITLKAKPAAT 551          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A6H5JJ64_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ64_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 6.640e-97
Identity = 192/477 (40.25%), Postives = 283/477 (59.33%), Query Frame = 3
Query:  234 LPPKDETFSPQGALAELLAAP-VPPASCGRFDGVGKKSGGIWRSCVLGFMPSTVL-AWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQ----EKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSA-DGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNH--DAASA-----DKEQPRPQPFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQ 1622
            LPP DET +P   + E+LAAP  P  +  RFDGVG  SGGIWRS V G +P+ V+ AW    KWM ++EAAGN+   + E   ++ G KA++++    + H  +      ALS KA+L+L P +EA + +L +RWEE A +GQE+ M +D++ F+LE+I G   GDYAT R  ED  RLLPI   G++S+P +   PLN LPM  F  S++AR++L  +++  + RR+ D A     G  ++  V+D F+ ++ +Q    E A       DDDFI+DN + +LFGG DTT+  ++R++Q LG+A DGK V+D+L  EL+    S    L   + G+   G  ++  LL+A+  + +                 +YNGY IP G++  W+   G RA  LYPEP+ FCPFRFLH G      +AAS         QP P  +GFG HMC GR+LAK+E+++F +  + +F+F++V+GQ
Sbjct:   53 LPPWDETSNPIATVREMLAAPDAPEDTPNRFDGVGWSSGGIWRSRVYGLLPAMVIDAWE-GTKWMTKEEAAGNLYQDWLEGTIQVVGKKAVSNLGTQHEVHTIVRRVNGEALSPKAVLRLQPLLEAPLRRLVLRWEELAETGQELTMQNDLRRFSLESIAGAFFGDYATPRFVEDTGRLLPILRQGLVSIPFRFSPPLNRLPMLGFGLSMHAREELKGLIRDALHRRRVDLASEQ--GTNKNPCVVDSFVDLQGQQQIGAEGALDGSFSFDDDFIIDNGLVALFGGIDTTSVTLTRMLQLLGTAEDGKEVMDQLIDELNNDATSGNIALEGGAAGLA--GTLESLSLLKALAGKDF-----------------SYNGYLIPEGQTFNWNLIHGSRAEKLYPEPQKFCPFRFLHGGEKKDTDNAASPGTGARSSGQPIPPMWGFGKHMCPGRDLAKVEIVLFMKTFMPKFDFEIVEGQ 507          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A6H5KBE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBE2_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 2.310e-84
Identity = 168/433 (38.80%), Postives = 239/433 (55.20%), Query Frame = 3
Query:  486 GPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKE-QEKAQGPDPEIDDDFIVDNVIAS--------------------------------------------LFGGYDTTAAAISRIVQTLGSA-DGKGVIDELSKELSKVI-VSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASAD-------KEQPRPQPFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQ 1622
            G K+++S+    + H      F+ ALS K+I+KL P +E+A+ K+ +RWEE A +GQEV + DDI DFTLE+I  GL G+YAT    +D  RLLP    G+ S P +   PLN LP F F  S++AR++   V++ +++RR+ D A     G     G++D F  + K+ Q  A+      DDDFI+DNV A+                                            LF G DTT+A ++R++Q LG+A DGK ++D+L+ ELS+   V N +     + G+    +  +FPLL AV LE+ RL P    VFR   +  +YNGY IP GE+I W+ + G  A +LYPEP  FCPFRFLH G      ++A          QP P  +GFG HMC GRELAKLEM++F +  L +F+F++V+GQ
Sbjct:    6 GEKSISSLGTQEEAHAIGRRVFNEALSAKSIIKLQPILESALQKVVLRWEEYAKTGQEVEIQDDITDFTLESIAAGLFGEYATPNFMQDTKRLLPALLTGLFSFPYKFPPPLNKLPPFAFGSSMDARQEYKGVVRELIQRRRADVAAGM--GASNSGGILDLFFELEKQYQMDAEEGSFFFDDDFIIDNVRAATNLSITGTSSLSLRTVLSERSRALNQCFMEFSHRFHRRPRVITILFAGKDTTSATLTRMLQLLGTAEDGKEIMDQLTDELSEAATVDNGDCEEFTAAGLPGAVLITSFPLLNAVVLEANRLHPAVGSVFRTTRKDISYNGYLIPEGETISWNLTQGSLAETLYPEPRQFCPFRFLHGGEKKDTDSAASPGTGARRSGQPIPPMWGFGKHMCPGRELAKLEMILFMKTFLPKFDFEVVEGQ 436          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: D7G2E4_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E4_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.140e-78
Identity = 146/328 (44.51%), Postives = 201/328 (61.28%), Query Frame = 3
Query:  747 EDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKE-QEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSA-DGKGVIDELSKELSKVIVSNEETLRHDST--GILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRG-------SFNHDAASADKEQPRPQPFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRLKMKANA 1697
            ED  RLLP    G+ S P +   PLN LP F F  S++AR++   V++ +++RR+ D A     G     G++D F  ++K+ Q  A+      DDDFI+DNVI  LF G DTT+  ++R++Q LG+A DGK ++D+L  ELSK    ++   R D T  G+   G+F +FPLL AV LE+ RL P+   VFR   +  +YNGY IP GE+I W+ + G  A +LYPEP  FCPFRFLH G       + +  A +    QP P  +GFG HMC GRELAKLEM++F +  L +F+F++V+GQ F G  PAN PK +L+V LK KA A
Sbjct:    2 EDTKRLLPALLTGLFSFPYRFPPPLNKLPTFAFGSSMDARQEYKDVVRDLIQRRRADVAAGM--GASNSGGILDSFFELQKQYQMDAEEGSFSFDDDFIIDNVITILFAGKDTTSVTLTRMLQLLGTAEDGKEIMDQLIDELSKAATVDDGE-REDGTAAGLPGAGLFTSFPLLNAVVLEANRLHPSVGAVFRTTRKDISYNGYLIPEGETISWNLNQGSLAETLYPEPRKFCPFRFLHGGEKKDTDSAASPGAGARSTGQPIPPMWGFGKHMCPGRELAKLEMVLFMKTFLPKFDFEVVEGQSFSGSLPANGPKDKLRVILKAKAPA 326          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A199UA73_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A199UA73_MANES)

HSP 1 Score: 132 bits (331), Expect = 2.770e-29
Identity = 125/452 (27.65%), Postives = 198/452 (43.81%), Query Frame = 3
Query:  336 KKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTA-QSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQ---PFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRL 1679
            K+ G I+++ +LG  P  +LA P A ++++  +A     P+YP+S ++L GP A+       + H+ L      +LSL ++  L+  I A        W      G  +    ++K F+ E       G +     RE++ +   I   G  S P         LP   + ++L ARK+L K+L  ++  RKE    + ++ GC           ++  + +K Q     + DD I DNVI +LF   DTTA+A++ IV+ L   D   +++ +  E  ++   N E      +  LS    +  P    V LES R+       FR+ V    Y GY IP G  ++            + +P  F P RF              +  P+P    PFG GVH+C G ELAKLEMLI    L ++F +++V  Q+     P   P   L  R 
Sbjct:   64 KRYGEIFKTHILG-CPCVMLASPEASRFVLVTQAH-LFKPTYPKSKERLIGPSAI--FFHQGEYHMRLRKLVQGSLSLDSLRNLVADISAIAASTLDSWN----GGHVINTFHEMKKFSFEVGILAFFG-HLDSHYREELKKNYRIVDKGYNSFPTS-------LPGTPYKKALTARKRLSKILGDIISERKEKRLLEKDLLGC-----------LLNSKGDKGQ----VLTDDQIADNVIGALFAAQDTTASALTWIVKYLH--DNPKLLEAVKAEQKEIYKMNNE-----GSQPLSWNQTRNMPFTHKVVLESLRMASVISFTFREAVSDVEYKGYLIPKGWKVMPLFRNIHHNPEYFRDPHKFDPSRF--------------EIPPKPNTFMPFGSGVHVCPGNELAKLEMLIITHHLSTKFRWEVVGSQNEIQYGPFPVPYHGLPARF 463          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: UPI001904D5D5 (cytochrome P450 n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI001904D5D5)

HSP 1 Score: 125 bits (315), Expect = 2.490e-27
Identity = 114/455 (25.05%), Postives = 208/455 (45.71%), Query Frame = 3
Query:  336 KKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKAL---TSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQPFGF-----GVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFD-GEPPANAPKGRLQV 1673
            KK G ++++ + G  P+ ++    A++++   E   N    +PES+  L G  +L   T  I  ++R +       RAL+       +PA+    N    +W+       E+    +++ +T +  C  L+G   T         L   +  G+ +LPI+       LP  KF ++L +R++L+  ++ ++  R++  +    D          G L+  K+++   G    I++  + D ++  LF G++T  +A+S     L  A    ++    KE +++          + TG L++   +    L+ +  E  R+ P   G FR VV+   +NGYRIP G S+L+ T    +  ++Y + + F P RF           S D+ + + +PF +     G+  C G+E AKLEM IF   LL  +E++LV GQ+ D    P   P+  L+V
Sbjct:   42 KKYGNVFKTNIFG-SPTIMMIGAEANRFVFSGEHQ-NFAIKWPESVAVLLGTASLATQTGSIHQTRRKLLFQAFQPRALA-----SYVPAMVEITNSYLQQWKNQG----ELTWYPELRKYTFDVACKLLVGTDTTNDAH--FVELFEEWVGGLFTLPIR-------LPGTKFSKALKSREQLLAKIEKIILHRQQQPSDEK-DAL--------GLLLNAKDED---GNSLSIEE--LKDQILTLLFAGHETLTSALSSFCLLL--AQNPDILAAARKEQAQI----------NFTGALTSEHLQNMTYLDQILKEVLRVIPPVAGGFRSVVQTCEFNGYRIPEGWSVLYQTGKTHQDETIYKDAKIFDPERF-----------SVDRNEDKSKPFSYVTFGGGMRECIGKEFAKLEMKIFAALLLRGYEWELVPGQNLDLAMIPTPQPRDGLKV 439          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A835D6N9_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835D6N9_9MAGN)

HSP 1 Score: 125 bits (315), Expect = 3.950e-27
Identity = 124/459 (27.02%), Postives = 207/459 (45.10%), Query Frame = 3
Query:  321 FDGVGKKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSY-PESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGI-FKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQ---PFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFD-LVKGQDFDGEPPANAPKGRLQVRL 1679
            +D + K S  ++++ +LG   + V      +K++   E    +V ++ P S+ K+F     TS    SK+   L+  F +  +L+  + ++  I  A   L   W+      QEV +    K +T    C   L     E V +  A    + A+G+IS+PI        LP   F+ ++ A   + K LQ+++K+RK D A++     +    ++   L+   +  +      E+D   I D ++  L GG+DT +AAI+ +V+ L  A+   + DE+ KE  ++  S        + G L N    +       V  E  RL P   G FR+ +    + G+ IP G  + W  +   R    +PEPE F P RF   G             P P    PFG G  MC G+E A+LE+L+F   +++RF+++ L+  +    +P     KG L VRL
Sbjct:   67 YDRMAKYSSKVFKTSLLG-ESAAVFCGAAGNKFLFSNE--NKLVQAWWPSSVDKIFPSSLQTSAKEESKKMRKLLPGFMKPEALQRYIGIMDTI--AKRHLESGWDNK----QEVVVFPLAKSYTFWLACRLFLSIEDPEHVHK-FADPFNVLASGIISIPIN-------LPGTPFNRAIKASNLIRKDLQAIIKQRKLDLAENRASPTQ---DILSYMLLTPDDNGQYMN---EMD---IADKILGLLIGGHDTASAAITFVVKYL--AELPHIYDEVYKEQMEIAKSK-------AAGELLNWEDIQKMRYSWNVACEVLRLAPPLQGAFREAINEFIFAGFSIPKGWKLYWSANSTHRNPECFPEPEKFDPSRFEGNG-------------PAPYTFVPFGGGPRMCPGKEYARLEILVFMYNVVTRFKWEKLIPNEKIVVDPMPIPAKG-LPVRL 476          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A1S3Z031_TOBAC (abscisic acid 8'-hydroxylase 4-like n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z031_TOBAC)

HSP 1 Score: 123 bits (309), Expect = 2.290e-26
Identity = 119/449 (26.50%), Postives = 196/449 (43.65%), Query Frame = 3
Query:  336 KKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRP-QPFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRL 1679
            ++ G I+++ +LG  P  +L  P A ++++  +A     P+YP+S + L G  AL         H+ +      +L+ +AI   +P IE    +LAI    +   G  V    ++K ++ E     + G +    +++ + +   I   G  S P         LP   + +SL ARK+L K+L  ++  RKE              G+++ FL  + E+         +++D I DN+I  LF   DTTA+ ++ I++ L   D   ++  +  E   +  SNE+   H  T   +    +  P+   V LE+ RL       FR+ V    Y GY IP G  ++       +    +P P+ F P RF             + ++P    PFG GVH C G ELAKLEMLI    L+++F ++           P   P G L  R 
Sbjct:   71 RRYGEIFKTKILG-CPCVMLTSPEAARFVLVNQA-NLFKPTYPKSKETLIGQSAL--FFHQGNYHIHVRKLVQTSLNPEAIRNQIPHIE----ELAISALNSWAGGHVVNTYHEMKKYSFEVGILAIFG-HLDAHLKDQLKKNYIIVDKGYNSFPTN-------LPGSPYRKSLQARKRLGKILSEIINERKEKKLIEK--------GLLNCFLNAKDEKGLV------LNEDQIADNIIGVLFAAQDTTASVLTWILKYLH--DNPKLLKNVKAEQKAICQSNEQE-NHGLTWTQT----RKMPITNKVVLETLRLASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHQNPEFFPNPQNFDPSRF------------ENVQKPNTFMPFGSGVHACPGNELAKLEMLIMTHHLVTKFRWEAEGSNSGIQYGPFPVPMGGLPARF 470          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A1R3KMI1_9ROSI (Cytochrome P450 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KMI1_9ROSI)

HSP 1 Score: 122 bits (307), Expect = 4.290e-26
Identity = 126/461 (27.33%), Postives = 202/461 (43.82%), Query Frame = 3
Query:  321 FDGVGKKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSY-PESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPI--FANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNE--ETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQ---PFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRL 1679
            FD + K S  ++++ +LG  P+ V      +K++   E    +V ++ P ++ K+F     TS    SK+   L+  F +  +L+  + ++  I  A N     WE       E+      K +T    C   +   + E   E I   +P    A+G+ISLPI        LP   F+ ++ A K + K L  ++K+R+ D A+    G +    ++   L     Q    G   ++ D  I D ++  L GG+DT +AA + IV+ L  A+   + D++ KE  ++  S    E L  D          +       V  E  RL P   G FR+ +    +NG+ IP G  + W  +   R    +PEPE F P RF   G             P P    PFG G  MC G+E A+LE+L+F   L++RF+++ V  ++     P   P   L VRL
Sbjct:   66 FDRMAKFSSQVFKTNLLG-EPAAVFCGANGNKFLFSNE--NKLVQAWWPRTVDKVFPTSLQTSSKEESKKMRKLLPNFMKPEALQRYIGIMDQI--AKNHFETEWENK----DEILTFPLCKRYTFWLACRLFV---SMEDPAEIIKYEVPFAGLASGMISLPID-------LPGTPFNRAIKASKWIRKGLLKIIKQRRIDLAEGKATGTQ---DILSHML-----QTTVDGI--QMGDLDIADKILGLLIGGHDTASAACTFIVKFL--AELPHIYDQVYKEQMEIANSKPPGELLNWDD--------IQKMKYSWNVAQEVLRLAPPLQGAFREAINDFMFNGFSIPKGWKLYWSANSTHRNPECFPEPEKFDPSRFEGNG-------------PAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVTRFKWEKVLPEETIVVNPMPIPAKGLPVRL 474          
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Match: A0A835LJK1_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LJK1_9MAGN)

HSP 1 Score: 124 bits (310), Expect = 5.260e-26
Identity = 115/456 (25.22%), Postives = 201/456 (44.08%), Query Frame = 3
Query:  324 DGVGKKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIKKLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAIRWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIFANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQSNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGYDTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILSNGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILWDTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQ---PFGFGVHMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVRLK 1682
            D + K S  I+++ +LG     V   P   K++   E    +   +P S+ K+F     +S     K+   ++  F R  +L+  +  + +I  A   L   W++      EV +    K +T+   C   +      ++ +  A      A+G++S+PI         P    ++++ A   + K L  ++K+RK D  Q+     +    ++   L+   E  ++     E+D   + D ++  + GG+DT + AI+ +V+ L       + +E+ KE  ++  S  E        +L+    K       V  E  RLTP SPG FR+ +   AY G+ IP G  + W T+   + A  +P+PE F P RF   G             P P    PFG G  MC G+E A+LE+L+F   ++++F+++ V   +     P  AP   L VRL+
Sbjct:   85 DRMRKFSAKIFKTSILG-ESMAVFCGPEGLKFLFSNENK-LVTVWFPSSVNKIFPFSLQSSGNEECKKMRKMLPGFLRPEALQRYIGTMDSI--AKQHLKTHWDDK----NEVLVFPLAKSYTISLACKLFVSVEDVVQIAK-FADPFACLASGIVSIPID-------FPGTSLNKAVKAANLIRKDLHEIIKQRKVDLDQNKASPTQ---DILSHMLLTTDENGQSM---EEMD---VADKILGLIIGGHDTASTAITFVVKYLSKLPH--IYNEVLKEQMEIKTSKREG------ELLNWEDIKKMRYSWNVVCEVMRLTPPSPGAFREAITDFAYEGFSIPKGWKLFWSTNSTHKNAKYFPDPEKFDPSRFEGNG-------------PAPYTYVPFGGGPRMCPGQEYARLEILVFMHNVVTKFKWEEVLRDEKIIVDPLPAPAKGLPVRLQ 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7269.14941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2E2_ECTSI3.680e-12743.74Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JJ64_9PHAE6.640e-9740.25CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBE2_9PHAE2.310e-8438.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2E4_ECTSI1.140e-7844.51Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A199UA73_MANES2.770e-2927.65Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
UPI001904D5D52.490e-2725.05cytochrome P450 n=1 Tax=Sphaerospermopsis aphanizo... [more]
A0A835D6N9_9MAGN3.950e-2727.02Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
A0A1S3Z031_TOBAC2.290e-2626.50abscisic acid 8'-hydroxylase 4-like n=6 Tax=Nicoti... [more]
A0A1R3KMI1_9ROSI4.290e-2627.33Cytochrome P450 n=1 Tax=Corchorus olitorius TaxID=... [more]
A0A835LJK1_9MAGN5.260e-2625.22Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7269contigH-elongata_contig7269:4755..8782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.0
Seed ortholog evalue9.4e-109
Seed eggNOG ortholog2880.D7G2E2
Preferred nameCYP26A1
KEGG rclassRC00144,RC00154,RC00206,RC00257,RC00524,RC00613,RC00661,RC00723,RC00724,RC00773,RC01218,RC01453,RC01504,RC01622,RC02078,RC02079,RC02664,RC03041,RC03235
KEGG koko:K04123,ko:K07437,ko:K09587,ko:K09588,ko:K09589,ko:K09590,ko:K09843,ko:K12637,ko:K12638,ko:K12639,ko:K12640,ko:K12664,ko:K12665,ko:K17875,ko:K20667
KEGG ReactionR06294,R06295,R06296,R06297,R07202,R07430,R07431,R07444,R07445,R07448,R07449,R07450,R07451,R07452,R07453,R07454,R07455,R07457,R07458,R07471,R07786,R07787,R07791,R07792,R08390,R08392,R08840,R08841,R09815,R09816,R09817,R10067,R10669,R10682,R10683,R10684
KEGG Pathwayko00830,ko00904,ko00905,ko00906,ko01100,ko01110,map00830,map00904,map00905,map00906,map01100,map01110
KEGG ModuleM00371
GOsGO:0000003,GO:0000226,GO:0000280,GO:0000902,GO:0000904,GO:0001101,GO:0001501,GO:0001523,GO:0001568,GO:0001578,GO:0001655,GO:0001709,GO:0001756,GO:0001767,GO:0001768,GO:0001775,GO:0001822,GO:0001944,GO:0001972,GO:0002376,GO:0002682,GO:0002694,GO:0003002,GO:0003006,GO:0003007,GO:0003131,GO:0003151,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005501,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006081,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006714,GO:0006720,GO:0006721,GO:0006722,GO:0006766,GO:0006775,GO:0006805,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007140,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007276,GO:0007283,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008219,GO:0008289,GO:0008299,GO:0008300,GO:0008395,GO:0008401,GO:0008544,GO:0008610,GO:0009056,GO:0009058,GO:0009111,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009555,GO:0009605,GO:0009628,GO:0009639,GO:0009642,GO:0009646,GO:0009647,GO:0009653,GO:0009685,GO:0009686,GO:0009687,GO:0009719,GO:0009725,GO:0009741,GO:0009753,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009867,GO:0009887,GO:0009888,GO:0009893,GO:0009908,GO:0009909,GO:0009911,GO:0009913,GO:0009932,GO:0009952,GO:0009954,GO:0009965,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010012,GO:0010016,GO:0010033,GO:0010035,GO:0010114,GO:0010154,GO:0010162,GO:0010171,GO:0010208,GO:0010224,GO:0010268,GO:0010295,GO:0010358,GO:0010431,GO:0010468,GO:0010584,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010817,GO:0010830,GO:0010831,GO:0010927,GO:0012501,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0014706,GO:0016020,GO:0016042,GO:0016043,GO:0016049,GO:0016053,GO:0016054,GO:0016101,GO:0016102,GO:0016103,GO:0016107,GO:0016114,GO:0016115,GO:0016125,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016134,GO:0016135,GO:0016137,GO:0016138,GO:0016202,GO:0016491,GO:0016705,GO:0016709,GO:0019222,GO:0019752,GO:0019825,GO:0019840,GO:0019953,GO:0020037,GO:0021532,GO:0021546,GO:0021570,GO:0021593,GO:0021661,GO:0021700,GO:0021797,GO:0021871,GO:0021903,GO:0021915,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0022611,GO:0022900,GO:0023051,GO:0023052,GO:0023057,GO:0030010,GO:0030104,GO:0030154,GO:0030198,GO:0030216,GO:0030278,GO:0030326,GO:0030522,GO:0030855,GO:0030900,GO:0030902,GO:0030917,GO:0031016,GO:0031090,GO:0031406,GO:0031424,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032787,GO:0032870,GO:0032989,GO:0033189,GO:0033273,GO:0033293,GO:0033561,GO:0033993,GO:0034653,GO:0034672,GO:0034754,GO:0035051,GO:0035107,GO:0035108,GO:0035113,GO:0035282,GO:0035295,GO:0036094,GO:0039017,GO:0040007,GO:0042110,GO:0042175,GO:0042221,GO:0042363,GO:0042445,GO:0042446,GO:0042476,GO:0042573,GO:0042574,GO:0042592,GO:0042692,GO:0042814,GO:0043009,GO:0043062,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043288,GO:0043290,GO:0043436,GO:0043586,GO:0043587,GO:0043588,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045165,GO:0045229,GO:0045321,GO:0045580,GO:0045595,GO:0045597,GO:0045619,GO:0045844,GO:0046164,GO:0046345,GO:0046394,GO:0046395,GO:0046649,GO:0046906,GO:0048037,GO:0048229,GO:0048232,GO:0048284,GO:0048285,GO:0048316,GO:0048366,GO:0048367,GO:0048384,GO:0048385,GO:0048387,GO:0048437,GO:0048438,GO:0048441,GO:0048443,GO:0048444,GO:0048448,GO:0048449,GO:0048455,GO:0048465,GO:0048466,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048598,GO:0048608,GO:0048609,GO:0048634,GO:0048636,GO:0048641,GO:0048643,GO:0048646,GO:0048653,GO:0048654,GO:0048655,GO:0048656,GO:0048657,GO:0048658,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048729,GO:0048731,GO:0048736,GO:0048738,GO:0048762,GO:0048793,GO:0048827,GO:0048831,GO:0048838,GO:0048854,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050878,GO:0050891,GO:0050896,GO:0051094,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051216,GO:0051239,GO:0051240,GO:0051249,GO:0051321,GO:0051704,GO:0051716,GO:0051777,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055011,GO:0055013,GO:0055014,GO:0055088,GO:0055114,GO:0060173,GO:0060255,GO:0060322,GO:0060323,GO:0060348,GO:0060349,GO:0060363,GO:0060365,GO:0060429,GO:0060485,GO:0060536,GO:0060537,GO:0060560,GO:0061004,GO:0061053,GO:0061061,GO:0061436,GO:0061448,GO:0061458,GO:0065007,GO:0065008,GO:0070268,GO:0070887,GO:0071229,GO:0071295,GO:0071299,GO:0071300,GO:0071310,GO:0071395,GO:0071396,GO:0071466,GO:0071495,GO:0071496,GO:0071695,GO:0071704,GO:0071840,GO:0072001,GO:0072048,GO:0072098,GO:0072329,GO:0072358,GO:0072359,GO:0080132,GO:0085029,GO:0090242,GO:0090567,GO:0090596,GO:0090696,GO:0090697,GO:0090698,GO:0097094,GO:0097159,GO:0097438,GO:0098827,GO:0099402,GO:0140013,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901657,GO:1901659,GO:1901700,GO:1901701,GO:1901861,GO:1901863,GO:1902105,GO:1902644,GO:1902809,GO:1902811,GO:1903046,GO:1903706,GO:1904888,GO:1905392,GO:1905393,GO:2000026,GO:2000241,GO:2000243,GO:2001014,GO:2001016,GO:2001035,GO:2001037
EggNOG free text desc.cytochrome p450
EggNOG OGsCOG2124@1,KOG0157@2759
EC1.14.13.112,1.14.13.134,1.14.13.201,1.14.13.79,1.14.13.93
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00199,ko01000
Hectar predicted targeting categorysignal peptide
Exons9
Model size1913
Cds size1704
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931128.755979-UTR-H-elongata_contig7269:4754..47801622931128.755979-UTR-H-elongata_contig7269:4754..4780Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7269 4755..4780 +
1691679709.7465403-UTR-H-elongata_contig7269:4754..47801691679709.7465403-UTR-H-elongata_contig7269:4754..4780Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7269 4755..4780 +
1622931128.9065602-UTR-H-elongata_contig7269:8599..87821622931128.9065602-UTR-H-elongata_contig7269:8599..8782Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7269 8600..8782 +
1691679709.8742766-UTR-H-elongata_contig7269:8599..87821691679709.8742766-UTR-H-elongata_contig7269:8599..8782Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7269 8600..8782 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931128.7691104-CDS-H-elongata_contig7269:4780..51431622931128.7691104-CDS-H-elongata_contig7269:4780..5143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 4781..5143 +
1691679709.7674878-CDS-H-elongata_contig7269:4780..51431691679709.7674878-CDS-H-elongata_contig7269:4780..5143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 4781..5143 +
1622931128.78197-CDS-H-elongata_contig7269:5779..58761622931128.78197-CDS-H-elongata_contig7269:5779..5876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 5780..5876 +
1691679709.7814326-CDS-H-elongata_contig7269:5779..58761691679709.7814326-CDS-H-elongata_contig7269:5779..5876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 5780..5876 +
1622931128.8007674-CDS-H-elongata_contig7269:6109..62791622931128.8007674-CDS-H-elongata_contig7269:6109..6279Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6110..6279 +
1691679709.7928169-CDS-H-elongata_contig7269:6109..62791691679709.7928169-CDS-H-elongata_contig7269:6109..6279Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6110..6279 +
1622931128.8142993-CDS-H-elongata_contig7269:6456..68491622931128.8142993-CDS-H-elongata_contig7269:6456..6849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6457..6849 +
1691679709.802686-CDS-H-elongata_contig7269:6456..68491691679709.802686-CDS-H-elongata_contig7269:6456..6849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6457..6849 +
1622931128.8281913-CDS-H-elongata_contig7269:6992..72251622931128.8281913-CDS-H-elongata_contig7269:6992..7225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6993..7225 +
1691679709.811806-CDS-H-elongata_contig7269:6992..72251691679709.811806-CDS-H-elongata_contig7269:6992..7225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 6993..7225 +
1622931128.8430712-CDS-H-elongata_contig7269:7420..75641622931128.8430712-CDS-H-elongata_contig7269:7420..7564Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 7421..7564 +
1691679709.8218467-CDS-H-elongata_contig7269:7420..75641691679709.8218467-CDS-H-elongata_contig7269:7420..7564Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 7421..7564 +
1622931128.861468-CDS-H-elongata_contig7269:7804..79251622931128.861468-CDS-H-elongata_contig7269:7804..7925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 7805..7925 +
1691679709.831946-CDS-H-elongata_contig7269:7804..79251691679709.831946-CDS-H-elongata_contig7269:7804..7925Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 7805..7925 +
1622931128.8730953-CDS-H-elongata_contig7269:8149..82241622931128.8730953-CDS-H-elongata_contig7269:8149..8224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 8150..8224 +
1691679709.8425643-CDS-H-elongata_contig7269:8149..82241691679709.8425643-CDS-H-elongata_contig7269:8149..8224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 8150..8224 +
1622931128.887416-CDS-H-elongata_contig7269:8491..85991622931128.887416-CDS-H-elongata_contig7269:8491..8599Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 8492..8599 +
1691679709.8564587-CDS-H-elongata_contig7269:8491..85991691679709.8564587-CDS-H-elongata_contig7269:8491..8599Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7269 8492..8599 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7269.14941.1prot_H-elongata_contig7269.14941.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7269 4781..8599 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7269.14941.1

>prot_H-elongata_contig7269.14941.1 ID=prot_H-elongata_contig7269.14941.1|Name=mRNA_H-elongata_contig7269.14941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=568bp
MMLQVTEVTLTVLFALTLWVEVVSFLPPNPMEYGVRASVGGKRHAYKTVG
YAFSKALNGTSESPSSGTRLPPKDETFSPQGALAELLAAPVPPASCGRFD
GVGKKSGGIWRSCVLGFMPSTVLAWPLADKWMIQQEAAGNIVPSYPESIK
KLFGPKALTSIILPSKRHVALMGAFDRALSLKAILKLLPAIEAAMNKLAI
RWEEAATSGQEVAMLDDIKDFTLETICGGLLGDYATERVREDIARLLPIF
ANGVISLPIQVGWPLNLLPMFKFDESLNARKKLIKVLQSVVKRRKEDTAQ
SNVDGCERHAGVIDGFLIIRKEQEKAQGPDPEIDDDFIVDNVIASLFGGY
DTTAAAISRIVQTLGSADGKGVIDELSKELSKVIVSNEETLRHDSTGILS
NGIFKAFPLLEAVFLESYRLTPNSPGVFRKVVRGTAYNGYRIPSGESILW
DTSVGCRAASLYPEPETFCPFRFLHRGSFNHDAASADKEQPRPQPFGFGV
HMCRGRELAKLEMLIFFRQLLSRFEFDLVKGQDFDGEPPANAPKGRLQVR
LKMKANATREYVNNIEA*
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mRNA from alignment at H-elongata_contig7269:4755..8782+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7269.14941.1 ID=mRNA_H-elongata_contig7269.14941.1|Name=mRNA_H-elongata_contig7269.14941.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4028bp|location=Sequence derived from alignment at H-elongata_contig7269:4755..8782+ (Himanthalia elongata Himel1 dioecious)
AGGTCTTCCAGTTTGTTGCGCCGAGTATGATGCTGCAGGTGACTGAAGTC ACCTTGACGGTGCTCTTCGCACTCACTCTCTGGGTCGAAGTAGTGTCCTT CTTGCCCCCCAACCCTATGGAATACGGAGTACGAGCAAGCGTGGGTGGAA AACGTCACGCATACAAGACCGTAGGATACGCTTTCTCGAAAGCGCTTAAC GGTACATCTGAGTCACCGTCATCGGGAACCCGCCTTCCGCCGAAAGACGA AACATTCAGTCCACAAGGGGCTCTGGCTGAACTGCTCGCCGCGCCCGTGC CCCCGGCATCATGTGGGCGCTTCGACGGGGTGGGCAAGAAGAGTGGCGGA ATCTGGCGATCTTGTGTACTTGGATTCATGCCGAGCACGGTAAGATCTGG TGGTCACGTCCCATTACCTTAAATCGAATGTACGTTGCGGTCTGACTCAG TTGATGATGCTCTTCAGCTATGTCAACGCTCCTTTTATAGGATTGTATGC ACTGTATGTGTGTGTTTGTTTGCCGATGGCTCATGTGGCCCGTAGGATAA ATATTATTATTATCAGACTCTCCACTCTGATACGCTTATCACAATGTCTG ATATGCCTGTTGGGACCCTTCTTTGCTTGACTTCTATTTCCAAGGCGATA TTCATGTCATACTACACGTATTTCATTGAGAGGACGACGTCATTTGCAGT CCATGAACATCATAACGCTGTGCTGCAAATAACTATCTGCGCAGCTCCCC ACTAATTTGGAGTGCCTCTACTTAATATTACTTTTGTGGCCGTCTATTTG ATCCGTTCCGACTCCAAGAGGGTAAGTTTTAGATTTGAACGTTGTGGGTT CCGGATGGATTTACATCACATAGTGTGCTATTTGCGTGGCTCTATCCGCA GCCTATACCAACGCCCCCCCTTTTGTAGACACCCAAGGGGGAACATATAT ATTCGTGTTTAGTGGCACCATGATGCTATACGAAGTACTTTGTTCATTGG CTGTCGCTTGCCTTTTTATGTGAAGGTTCTAGCCTGGCCGTTGGCGGACA AATGGATGATTCAACAGGAGGCTGCTGGGAATATTGTTCCTTCCTATCCG GAGAGCATCAAGAAGCTATTCGGTGCGACTGACTTTCAGGATCTATACGC GCACCCCCTCAAACAATGGTTTTTAGAAAAAGGACTATATCATAGGATAG CGAGAGTTAATGTAGGGTTACACGGGATTAAACTCAGGGTGTGTAGCTTT CGTTGCTTCAAAATGCAGTAAGATGTATTGCGGTATATATGAGAGTCCCT TCATGGTAGACTTGCAGCTCGTCATTGCTTTAGCCCCGCGGCGTCCTGAT GTCAGGTCCCAAGGCGCTCACATCCATAATTCTACCATCTAAGCGCCACG TCGCGTTGATGGGGGCTTTCGATCGGGCTCTATCGCTCAAAGCTATTCTT AAGCTATTGCCAGCGATTGAGGCGGCCATGAACAAATTGGCTATTAGGTG GGAAGAGGCTGCGACATCCGGACAGGTGAAATTTGTCCCTCTATCACCTC TGTCTTTTGTTAGTAGCATTCGTTCATCACGCGCACAAAGGAGATCGTCA GGATAAGTGCAGCACGGCACAAACCCGAGTCAACGTATGAATGTACCGTT GCTAAATACTAGCAGCTCTGTTATATTTCTTGTTAACGGCATTCCTCCAC AGGAGGTCGCAATGTTGGACGATATAAAGGACTTTACCCTGGAGACGATC TGCGGAGGGTTACTCGGCGATTACGCCACCGAAAGAGTTCGTGAAGATAT TGCTCGCCTTCTTCCTATATTCGCGAACGGCGTCATCAGTCTCCCGATAC AAGTTGGCTGGCCACTGAACTTGCTCCCTATGTTTAAGTTTGATGAAAGT TTAAACGCACGGAAAAAGCTCATAAAAGTTCTCCAAAGCGTAGTGAAGCG AAGAAAGGAGGATACCGCGCAATCAAATGTGGATGGCTGTGAGCGACACG CGGGTGTTATTGACGGCTTCCTAATAATTCGTAAGGAACAAGAGAAAGCT CAGGGCCCGGACCCAGAAATCGACGACGACTTCATCGTTGACAACGTAAG CAATTCCTATGTACACACGATAAATATATCTGGGCACCACATGCCATCAG CACGCTATCAGGTGGTTGGTTTGCTCCGTGTCACATATCTGTATCAATGC TTCCTATCGCCTCTTCTCCGCATTAAACTTTGAAGCAGGTGATTGCATCT CTGTTCGGTGGGTATGACACTACAGCGGCTGCAATTTCTCGCATTGTTCA GACCCTCGGGTCGGCCGACGGTAAGGGTGTTATTGATGAACTATCAAAGG AGCTCAGCAAGGTGATTGTATCCAACGAAGAAACCCTGCGACACGATTCG ACTGGAATTCTATCGAACGGCATCTTCAAAGCGTTTCCCCTGCTCGAGGC GGTCTTCTTGGAATCATATCGGTCAGTGCCTTAGTATCAAGCATTTTCAC GCGCAACAGTGTCGCAAACATTTGATGCCTAAGCGAACGACTTGGGTCCG TACAGGCTTTGAAATCAATGGATGCTTTCATGTGATCAACATTCAAGCAC TACTGAAATTTATCAATAATGTTGTTTGAAACTGACTCTTTTGCATACAT CATCGACGAATGACAGGCTTACACCAAATAGCCCAGGCGTGTTCCGCAAG GTCGTTCGAGGAACAGCGTACAACGGGTACCGGATCCCTTCCGGGGAGAG CATTTTGTGGGACACCTCTGTAGGATGCCGTGCCGCAAGTCTCTACCCTG AACCTGAAACGTGAGTACAATGGGGCAGCAGAGGATAAAGTTAGCGATCA TCCTTCTACTTTTACGATGCAAAACGGGTCACGAGGTTGTAAATTTACAT TTGATTACTTCAACCGAGTTCGAAAACTATTGGTCATCTTAAACCGTACA AGAATGACGCGAACATAGCTAGAGTTACCTGGGTTGCCTGGAGAAGACGA TATTAATATTTCAACCCTGCGCTGCTCGATCCATCTCACCGCTTTACCAG ATTTTGTCCCTTTCGATTTCTCCATAGAGGCAGCTTCAACCATGACGCTG CATCAGCTGATAAAGAACAACCGCGCCCTCAACCTTTCGGCTTTGGAGTC CACATGTGCCGCGGTAGGGAGGTAAGCAGTTATCATGTTACCCATATGTT GTACGGGCATCATCCAAAACGACAGCGAAGACATTGCCCATTCGCTTCTC GCTTCTTCTGGTGTTATCTGGGAGAGTGTATGCCGTAGTCAGGAAGTCGG TTATATCATGAACCGTTTCATAAGGCCGGACATTTCTTAGTAAGCGAGAA AACATATGGTACCATCCTCGTGCTGCTTGCATCCATGTATACCAGCTTGC GAAGCTGGAGATGCTGATATTTTTCCGGCAGCTCTTGAGTCGGTTCGAAT TCGACCTGGTGAAAGGCCAGGTGAGTCGTTGTCCATGAAGATGACCTTCA CAGCTCACCGAATTTTACTTCGGGCCCGCGTCTGCGACTAAGCCCGTTTC CTTCTGTAGTACAATGTGTAACTTCTACTACTACTACATTTCGGTGGATT GATGTTTGCCGTTACGTGCAAATATGTTTCCGCTAATGAGCGTGTTCCGT CATGGTACATGCAAGCGCACAAACCGAAAACACGCAAAGAAACCATCTCT AACTAAACTGTCCCTCTCTAATCTTAACAACGGGCAGGATTTCGATGGGG AGCCGCCGGCGAACGCTCCAAAGGGAAGGCTCCAGGTTAGGCTCAAGATG AAGGCAAATGCAACCCGCGAATACGTCAACAACATAGAAGCGTAAACTCA GACATACAATTTAGACACAAGTATAAACCTGTCCACGGGGGATAAGGAGA GCTTTATCTTCCATTCTAAATCTCGCGGCTGCCAATCGGCATGGATATAT AATTTGGAAAGGTTGACGGTCAAAATGAATTGCAAATACCGGTACGTAAT TGGCGCCATAGCAGTTCGGGAATGGACT
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Coding sequence (CDS) from alignment at H-elongata_contig7269:4755..8782+

>mRNA_H-elongata_contig7269.14941.1 ID=mRNA_H-elongata_contig7269.14941.1|Name=mRNA_H-elongata_contig7269.14941.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3408bp|location=Sequence derived from alignment at H-elongata_contig7269:4755..8782+ (Himanthalia elongata Himel1 dioecious)
ATGATGCTGCAGGTGACTGAAGTCACCTTGACGGTGCTCTTCGCACTCAC
TCTCTGGGTCGAAGTAGTGTCCTTCTTGCCCCCCAACCCTATGGAATACG
GAGTACGAGCAAGCGTGGGTGGAAAACGTCACGCATACAAGACCGTAGGA
TACGCTTTCTCGAAAGCGCTTAACGGTACATCTGAGTCACCGTCATCGGG
AACCCGCCTTCCGCCGAAAGACGAAACATTCAGTCCACAAGGGGCTCTGG
CTGAACTGCTCGCCGCGCCCGTGCCCCCGGCATCATGTGGGCGCTTCGAC
GGGGTGGGCAAGAAGAGTGGCGGAATCTGGCGATCTTGTGTACTTGGATT
CATGCCGAGCACGATGATGCTGCAGGTGACTGAAGTCACCTTGACGGTGC
TCTTCGCACTCACTCTCTGGGTCGAAGTAGTGTCCTTCTTGCCCCCCAAC
CCTATGGAATACGGAGTACGAGCAAGCGTGGGTGGAAAACGTCACGCATA
CAAGACCGTAGGATACGCTTTCTCGAAAGCGCTTAACGGTACATCTGAGT
CACCGTCATCGGGAACCCGCCTTCCGCCGAAAGACGAAACATTCAGTCCA
CAAGGGGCTCTGGCTGAACTGCTCGCCGCGCCCGTGCCCCCGGCATCATG
TGGGCGCTTCGACGGGGTGGGCAAGAAGAGTGGCGGAATCTGGCGATCTT
GTGTACTTGGATTCATGCCGAGCACGGTTCTAGCCTGGCCGTTGGCGGAC
AAATGGATGATTCAACAGGAGGCTGCTGGGAATATTGTTCCTTCCTATCC
GGAGAGCATCAAGAAGCTATTCGGTTCTAGCCTGGCCGTTGGCGGACAAA
TGGATGATTCAACAGGAGGCTGCTGGGAATATTGTTCCTTCCTATCCGGA
GAGCATCAAGAAGCTATTCGGTCCCAAGGCGCTCACATCCATAATTCTAC
CATCTAAGCGCCACGTCGCGTTGATGGGGGCTTTCGATCGGGCTCTATCG
CTCAAAGCTATTCTTAAGCTATTGCCAGCGATTGAGGCGGCCATGAACAA
ATTGGCTATTAGGTGGGAAGAGGCTGCGACATCCGGACAGGTCCCAAGGC
GCTCACATCCATAATTCTACCATCTAAGCGCCACGTCGCGTTGATGGGGG
CTTTCGATCGGGCTCTATCGCTCAAAGCTATTCTTAAGCTATTGCCAGCG
ATTGAGGCGGCCATGAACAAATTGGCTATTAGGTGGGAAGAGGCTGCGAC
ATCCGGACAGGAGGTCGCAATGTTGGACGATATAAAGGACTTTACCCTGG
AGACGATCTGCGGAGGGTTACTCGGCGATTACGCCACCGAAAGAGTTCGT
GAAGATATTGCTCGCCTTCTTCCTATATTCGCGAACGGCGTCATCAGTCT
CCCGATACAAGTTGGCTGGCCACTGAACTTGCTCCCTATGTTTAAGTTTG
ATGAAAGTTTAAACGCACGGAAAAAGCTCATAAAAGTTCTCCAAAGCGTA
GTGAAGCGAAGAAAGGAGGATACCGCGCAATCAAATGTGGATGGCTGTGA
GCGACACGCGGGTGTTATTGACGGCTTCCTAATAATTCGTAAGGAACAAG
AGAAAGCTCAGGGCCCGGACCCAGAAATCGACGACGACTTCATCGTTGAC
AACGAGGTCGCAATGTTGGACGATATAAAGGACTTTACCCTGGAGACGAT
CTGCGGAGGGTTACTCGGCGATTACGCCACCGAAAGAGTTCGTGAAGATA
TTGCTCGCCTTCTTCCTATATTCGCGAACGGCGTCATCAGTCTCCCGATA
CAAGTTGGCTGGCCACTGAACTTGCTCCCTATGTTTAAGTTTGATGAAAG
TTTAAACGCACGGAAAAAGCTCATAAAAGTTCTCCAAAGCGTAGTGAAGC
GAAGAAAGGAGGATACCGCGCAATCAAATGTGGATGGCTGTGAGCGACAC
GCGGGTGTTATTGACGGCTTCCTAATAATTCGTAAGGAACAAGAGAAAGC
TCAGGGCCCGGACCCAGAAATCGACGACGACTTCATCGTTGACAACGTGA
TTGCATCTCTGTTCGGTGGGTATGACACTACAGCGGCTGCAATTTCTCGC
ATTGTTCAGACCCTCGGGTCGGCCGACGGTAAGGGTGTTATTGATGAACT
ATCAAAGGAGCTCAGCAAGGTGATTGTATCCAACGAAGAAACCCTGCGAC
ACGATTCGACTGGAATTCTATCGAACGGCATCTTCAAAGCGTTTCCCCTG
CTCGAGGCGGTCTTCTTGGAATCATATCGGTGATTGCATCTCTGTTCGGT
GGGTATGACACTACAGCGGCTGCAATTTCTCGCATTGTTCAGACCCTCGG
GTCGGCCGACGGTAAGGGTGTTATTGATGAACTATCAAAGGAGCTCAGCA
AGGTGATTGTATCCAACGAAGAAACCCTGCGACACGATTCGACTGGAATT
CTATCGAACGGCATCTTCAAAGCGTTTCCCCTGCTCGAGGCGGTCTTCTT
GGAATCATATCGGCTTACACCAAATAGCCCAGGCGTGTTCCGCAAGGTCG
TTCGAGGAACAGCGTACAACGGGTACCGGATCCCTTCCGGGGAGAGCATT
TTGTGGGACACCTCTGTAGGATGCCGTGCCGCAAGTCTCTACCCTGAACC
TGAAACGCTTACACCAAATAGCCCAGGCGTGTTCCGCAAGGTCGTTCGAG
GAACAGCGTACAACGGGTACCGGATCCCTTCCGGGGAGAGCATTTTGTGG
GACACCTCTGTAGGATGCCGTGCCGCAAGTCTCTACCCTGAACCTGAAAC
ATTTTGTCCCTTTCGATTTCTCCATAGAGGCAGCTTCAACCATGACGCTG
CATCAGCTGATAAAGAACAACCGCGCCCTCAACCTTTCGGCTTTGGAGTC
CACATGTGCCGCGGTAGGGAGATTTTGTCCCTTTCGATTTCTCCATAGAG
GCAGCTTCAACCATGACGCTGCATCAGCTGATAAAGAACAACCGCGCCCT
CAACCTTTCGGCTTTGGAGTCCACATGTGCCGCGGTAGGGAGCTTGCGAA
GCTGGAGATGCTGATATTTTTCCGGCAGCTCTTGAGTCGGTTCGAATTCG
ACCTGGTGAAAGGCCAGCTTGCGAAGCTGGAGATGCTGATATTTTTCCGG
CAGCTCTTGAGTCGGTTCGAATTCGACCTGGTGAAAGGCCAGGATTTCGA
TGGGGAGCCGCCGGCGAACGCTCCAAAGGGAAGGCTCCAGGTTAGGCTCA
AGATGAAGGCAAATGCAACCCGCGAATACGTCAACAACATAGAAGCGTAA
GATTTCGATGGGGAGCCGCCGGCGAACGCTCCAAAGGGAAGGCTCCAGGT
TAGGCTCAAGATGAAGGCAAATGCAACCCGCGAATACGTCAACAACATAG
AAGCGTAA
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