mRNA_H-elongata_contig7258.14927.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI) HSP 1 Score: 455 bits (1171), Expect = 4.660e-143 Identity = 243/470 (51.70%), Postives = 296/470 (62.98%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVNSTIHLTGNPTEEVKRAMSRLFSKS---------------------------RYTPAPMNTNFESALADGVFDSKHSRGLRSILKSPRESTATFESGVYFAAFEGVDPPGCHAVDLHFGKPDIPKFIAETLR--DMAAMEHG----------------------GLACPPEVARHSRVISSRLDAFQAEIKKTLTTADLSAIKNA-----DKANAMHGEGNA---------PWGVIYCGANVHVEKAIATSCSELNVPWRKEYFGAW 1215
+M+F+ RK MHMLFL++L+ LCFHS FRYV IL++WY++D YFITKQT+LV HPT+EAIGRGTMVGIDLP+GY +KAGSYIYVNCPAIDR EWHPFSLIPVPG+ SRAAFYAEAVGDWT +LFRLGL NPS PLWITAAQPS +ETTL+YDNVLLICTGAG+TPA+AVA+RF KKNIHLMWIARDHGMMALFEKQL++V ST+HLTGNP EE+K AMS+L S+S + T + ++ + +S + +HS+G + S E T E + + PP H V L+FG+PDI KFI + L A + G G R ++ LDA Q + + L A S ++N D NA +G PW VIYCGAN VE+ IA++C ELNV WRKEYFG W
Sbjct: 275 KMTFQFRKRMHMLFLVMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVTSRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNVLLICTGAGITPAVAVADRFAAKKNIHLMWIARDHGMMALFEKQLRMVTSTVHLTGNPDEEIKDAMSKLLSRSTNKFCTKKGKWVGDAEAGELLTHTSLHKLTHSSVHRHGDSLQSVFARARQHSQGT---MLSDIEDDRTREDTTGWGEHGDMPPPVAHDVTLNFGRPDIAKFILDALNATPSATLTAGIGLSGTGATTGIGAARTSPRSSGNTANAATKRMDNQVTEHLDASQKKSRTVLIRASTSTVENIKKQSRDSDNAASRKGRKAPNYKPKSFPWIVIYCGANARVEEVIASTCDELNVTWRKEYFGGW 741
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 300 bits (768), Expect = 2.730e-83 Identity = 133/229 (58.08%), Postives = 173/229 (75.55%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVNSTIHLTGNPTEEVKRAMSRLFSKSR 687
Q++FE RK +H+LF+ ++ +CFH + +G IL+ WY+LD+LYF TK T+L+ P ++ +GRGT+V +LP GY YK G+Y+ VNCPAI EWHPFSL PVPG RA F+ EAVGDWT E+FR L NP PLWITAAQPS +E T+Y++NVLL+CTGAG+TPA++VAERF KKKNIHL+W RD GM+A+FEKQL+ V ST+ LTG PT + K+ M L + SR
Sbjct: 404 QLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGPRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFENVLLVCTGAGITPAVSVAERFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVFLTGKPTNKTKKRMVDLLAPSR 632
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 273 bits (698), Expect = 5.170e-76 Identity = 141/350 (40.29%), Postives = 196/350 (56.00%), Query Frame = 1
Query: 4 MSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVNSTIHLTGNPTEEVKRAMSRLFSKSRYTPAPMNTNFESALADGVFDSKHSRGLRSILKSPRESTATFESGVYFAAFEGVDPPGCHA------------------------------------VDLHFGKPDIPKFIAETLRDMAAMEH 945
M+FE RK +HMLF+ ++ +CFH + GIL+ WY++D+ YF T+ GY +K GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT ELFRL L +P PLWITAAQPS +E ++Y++NV+++CTGAG+TPA+ +A+ KKKN+HLMW++R+ GM+A FEKQL+ VNST+HLTG PTE+ K+ ++ L + S+ P P T S+ +D L + + R F+ G Y A + D GC + + L+FG+PDI KF+ ET+R ++ +H
Sbjct: 172 MTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRI------------------------GYQFKVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFENVIMVCTGAGITPAICLADMLSKKKNVHLMWLSREAGMVATFEKQLRRVNSTVHLTGKPTEKTKQRLTDLLAHSK-APPPAETG--SSCSDPT-------DLEAGFAAARSRNDDFDDGAYGAGGDMEDLGGCSSNRXXXXXXXXXXXXXXXXXXXXXXXKRLRRTPFGKPISLNFGRPDIEKFLTETIRGSSSSQH 487
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI) HSP 1 Score: 265 bits (676), Expect = 6.750e-71 Identity = 120/229 (52.40%), Postives = 160/229 (69.87%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVNSTIHLTGNPTEEVKRAMSRLFSKSR 687
+++FE RK +H+LF+ ++ +CFH + +G IL+ WY+LD+LYF TK T+L+ P ++ +GRGT+V +LP GY YK G+Y+ VNCPAI EWHPFSL PVPG RA F+ EAVGDWT E+FR L NP PLWITAAQPS VE T+Y+DN ++ A+ + F KKKNIHL+W RD GM+A+FEKQL+ V ST++LTG PT + K+ M L + SR
Sbjct: 392 KLTFEARKYLHLLFIPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGSRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVVEKTMYFDNE------PSISEAIELEPVFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVYLTGKPTNKTKKRMVDLLAPSR 614
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE) HSP 1 Score: 189 bits (481), Expect = 1.320e-47 Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1
Query: 4 MSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDN 465
M+FE RK +HMLF+ ++ +CFH + GIL+ WY++D+ YF T+ + + F +GR T+V DLP GY + GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT ELFRL L +P PLWITAAQPS +E ++Y++N
Sbjct: 381 MTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRMHFCIERAVFRPVGRATLVRFDLPPGYQFNVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLEDPCMPLWITAAQPSVLEKSVYFEN 534
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: A0A7S2A4J8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4J8_TRICV) HSP 1 Score: 133 bits (335), Expect = 2.220e-28 Identity = 69/219 (31.51%), Postives = 108/219 (49.32%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGS--YIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVN---STIHLTGNPT 642
++ +E RKG+H LF + +C+CFH YV G I Y LD +Y T + TF+ + G ++ +++ + + + G + YV P +DR +WH FSL P S+ + GDWT + RN P+W+ SP YDN +L+ +G G+TPAL+V + +L+W RD M+ F + L L + + I TG T
Sbjct: 181 KIRYEIRKGLHYLFYVFAICMCFHGGYIGYVLGFCISLYSLDMMYITLFMTEKIETTTFQVLSSGVLMSMNVSKSFQKRGGQGGFAYVCLPWVDRNQWHAFSLFEHPSNPSKRQVFMLKTGDWTRAVHEALQRNTVRPVWVQGPFVSPYSQAEAYDNQILVASGIGITPALSVIRAHRDSRRSNLIWAVRDPSMLQFFLEHLYLDHDGWNLIFYTGKET 399
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: B8CG47_THAPS (FAD-binding FR-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG47_THAPS) HSP 1 Score: 124 bits (310), Expect = 2.180e-25 Identity = 70/215 (32.56%), Postives = 104/215 (48.37%), Query Frame = 1
Query: 4 MSFETRKGMHMLFLLLLMCLCFHSDTFRY--------VGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYN--YKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAV--GDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVN 612
MS+E RKG+H LF L + +CFH+ T + V G IV+Y LD LY + T ++ F + G + + + + Y G Y YV P + + +WH FSL P + + V GDWT + RN P+WI+ SP L +DN + + +G G+TPAL+V + + I+L+W RD M+ F L L N
Sbjct: 214 MSYEVRKGLHYLFYLFAIGMCFHNKTSAFPNGGFNQVVLGFCIVYYTLDSLYVMIFMTEMIETTVFNVLPSGVQMTMAVSDHFQKTYAQGGYGYVCLPWVSKYQWHAFSLFEHPTDPNLRQVFMMKVQGGDWTNSVHEQLQRNTVRPVWISGPFVSPYNNALDFDNTICVASGIGITPALSVIRAHRESRRINLIWTCRDVAMLEFFSDHLYLNN 428
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL) HSP 1 Score: 122 bits (306), Expect = 1.090e-24 Identity = 66/213 (30.99%), Postives = 113/213 (53.05%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHS---DTFRYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPS-HPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVNSTIHL 627
++S+E RKG+H L + + L FH+ + F + +L+V Y LD LY + + Y++ F + G + P+G+ + G Y+ + P ++R +WH FSL P +++ + VGDWT L P+ P W+ SP T L +DN++L+ +G G+TPA+ V K + ++L+W RD G++ + +QL NS +L
Sbjct: 211 RLSWEVRKGLHHLHWVFGIALAFHAPAVNIFWIMFAVLLV-YGLDALYGLLLKAYIIETAEFTCLKNGVQLRFVNPEGF--RGGGYVLLCVPWLNRHQWHAFSLFSHPTEPNQSCVHISNVGDWTDLLHGSLTERPTCRPCWVQGPFASPYHTALEFDNIILVASGIGITPAIEVINHHAKTRKVNLVWSCRDPGLVQFYLEQLAFTNSAWNL 420
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU) HSP 1 Score: 118 bits (295), Expect = 1.670e-23 Identity = 65/226 (28.76%), Postives = 114/226 (50.44%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTF--RYVGGILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKAGSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKLVN---STIHLTGNPTEEVKRAM 663
+M++E RKG+H L ++ + +CFH+ ++ G+ + Y+ D L +TY V F + G + + P G++++ Y+ V P I + +WH FSL + A AVGDWT L P WI+ SP T YDN++L+ +G G+TPAL++ + +K+ ++L+W RD ++ + + + + I+ TG E+ RA+
Sbjct: 187 RMAWEWRKGLHYLSIVWGITICFHAPLMDIAWLMGVPVGMYLADMLIGSVWRTYRVDTSIFYRLENGVELTFEHPPGFHFQGAGYVLVCLPWISQYQWHAFSLFAHSTKPNHACVCMSAVGDWTKSLHAHVQEPTRRPAWISGPFASPYSTAGEYDNLILVASGIGITPALSLITTYKEKRRVNLIWSCRDASLVEFYLDKCQFSTDGWTLIYYTGKRQLELPRAL 412
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Match: A0A7S4NI13_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI13_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.080e-23 Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 1
Query: 1 QMSFETRKGMHMLFLLLLMCLCFHSDTFRYVGG--------ILIVWYILDKLYFITKQTYLVPHPTFEAIGRGTMVGIDLPQGYNYKA--GSYIYVNCPAIDRGEWHPFSLIPVPGIGSRAAFYAEAVGDWTTELFRLGLRNPSHPLWITAAQPSPVETTLYYDNVLLICTGAGVTPALAVAERFYKKKNIHLMWIARDHGMMALFEKQLKL 606
++S+E RKG+H LF+L + LCFH G I Y D Y T + TF + G + + + + + + G + +V P +D+ +WH FSL P S+ + GDWTT + + R+ P+WI SP YDN +L+ TG G+TPAL+V + I+L+W RD M+ F + L L
Sbjct: 103 KISYEMRKGLHYLFILFAVGLCFHVPMSAIPNGGFIAPAMGFCIFLYAADASYVYLFMTEKIETTTFHVLSSGVRITMPVSETFQKSSEKGGFAFVCLPWVDKLQWHAFSLFEDPSDPSKRQMFMLKTGDWTTAVHKALQRDTVRPVWIQGPFLSPYNYAEMYDNQVLVATGIGITPALSVIRAHKSSRRINLVWAVRDPSMLEFFLEHLYL 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7258.14927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7258.14927.1 >prot_H-elongata_contig7258.14927.1 ID=prot_H-elongata_contig7258.14927.1|Name=mRNA_H-elongata_contig7258.14927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=405bp MSFETRKGMHMLFLLLLMCLCFHSDTFRYVGGILIVWYILDKLYFITKQTback to top mRNA from alignment at H-elongata_contig7258:3278..10358- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7258.14927.1 ID=mRNA_H-elongata_contig7258.14927.1|Name=mRNA_H-elongata_contig7258.14927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7081bp|location=Sequence derived from alignment at H-elongata_contig7258:3278..10358- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7258:3278..10358- >mRNA_H-elongata_contig7258.14927.1 ID=mRNA_H-elongata_contig7258.14927.1|Name=mRNA_H-elongata_contig7258.14927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2430bp|location=Sequence derived from alignment at H-elongata_contig7258:3278..10358- (Himanthalia elongata Himel1 dioecious)back to top |