mRNA_H-elongata_contig72213.14892.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.280e-48 Identity = 78/128 (60.94%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYMKNAP 384
+Y + +EAA+ADA ++ V DMHF L P++ E+D KKL++RK + + YLP WLGNLE+ L+AAGG YFA KLSIGDI VVARLNWLK G L+GIP TIVD++PLL ALV VMSE KIV Y+++ P
Sbjct: 78 LYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.700e-47 Identity = 77/129 (59.69%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYMKNAPR 387
+YPT+ ++AA+AD+ D V+D+ + + EKD KK +LRKDLVET LP WL NLEK L+ AGG YFA +KLSIGDIAVVARLNWL DGT EG+P+T++DE PL+ +LV RVM+EP+IV YM+ P+
Sbjct: 77 LYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPK 205
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 158 bits (400), Expect = 3.380e-47 Identity = 75/129 (58.14%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYMKNAPR 387
+YP + ++AA+AD+ VD V+D+H + + EKD K +LRKDLVET LP WL N EK L+ AGG YFA +KLSIGDIAVVARLNWL DGT EG+P+T+++E+PLL +LV R+M+EP+IV YM+ P+
Sbjct: 27 LYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPK 155
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 160 bits (404), Expect = 4.570e-47 Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYMKNAPRST 393
+YP + +EAA ADA VD+V D H +LAP++Q+KD +++++R++LV +LP WLGNLEK L AGG YFA KLSIGDIAVVARL WLK+G+L+GIPT+IVDEYPLL AL++RV +EP I Y + +T
Sbjct: 80 LYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQERSETT 210
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.700e-43 Identity = 75/130 (57.69%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTL-EGIPTTIVDEYPLLLALVDRVMSEPKIVVYMKNAPR 387
+YPT+ ++AA+AD+ D V DMH + EKD K +L KDLVE LP WL NLEK L+ AGG YFA +KLSIGDIAVVARLNWL DGT E +P+ I++E+PLL +LV RVM+EP+IV YM+ P+
Sbjct: 77 LYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPK 206
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.080e-30 Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 7 PTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYM 372
P++ + AA DA +D VTD+H + PS EKD KK+++R DL ++P WL N+EK L + G +F +K+++ DI + RL+ +++G L+GIPTTI D YP L A+ D V+SEPK+ ++
Sbjct: 80 PSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFL 200
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.890e-25 Identity = 46/109 (42.20%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 46 VDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYM 372
+D TD + + PS EKD KK+++R DL Y+P WL N+EK L + G +F ++++ D+ + RL+ +K+G L+GIPTTI D P L AL D V+SEPK+ ++
Sbjct: 1 MDCATDYYINIRPSFMEKDEAKKMEMRADLAANYIPKWLSNMEKQLSSTDGTFF-DGQMTVADMMIAYRLHHMKNGVLDGIPTTIADSCPSLCALYDAVVSEPKVAAFL 108
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: A0A2E1MVP6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E1MVP6_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 9.230e-19 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 1 IYPTNH-VEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFL-EAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEYPLLLALVDRVMSEPKIVVYM 372
+YP N +AA D ++ D++F + S ++KD +K RK L +LP W LE L + +YF N L+I D+A+ L WLK G L+G+PTTI+DEY L L + + PK++ +M
Sbjct: 85 LYPKNDDYKAALIDQIIEAAQDINFLVTLSGRDKDEERKKIARKILATNHLPKWFQFLENLLRQNTKSVYFVDNNLTIADLAIWRLLGWLKSGMLDGVPTTILDEYENLNKLREEIYKNPKVIKWM 210
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: A0A7Y1XUA7_9GAMM (Glutathione S-transferase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1XUA7_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 4.580e-16 Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDM-HFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEY-PLLLALVDRVMSEPKIVVYMKN 378
+YPTN ++A Y D +D + D+ H+ + + D K R+ LVE +L ++ LE L GG YFA KL+I D+ V + L+ GTL+ +PT +VD+ P L A +RV +P+++ Y ++
Sbjct: 78 LYPTNEMQALYCDEVMDALEDLGHYIVRTFGLKGDELKSA--REKLVEGWLTTYIRGLEGLLTRGGGEYFADGKLTIADLKVFTQTRSLRSGTLDHVPTDLVDKLAPGLAAHQERVQDDPRVIAYYES 203
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Match: A0A534FQ73_9GAMM (Glutathione S-transferase n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534FQ73_9GAMM) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-13 Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 1 IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLPLWLGNLEKFLEAAGGMYFASNKLSIGDIAVVARLNWLKDGTLEGIPTTIVDEY-PLLLALVDRVMSEPKIVVYMKN 378
+YP + +A D +D D+ R+A ++ + KK K R++LV + +L + L+AAGG YFA +L++ D+ + + WL+ G L+ IP +VD PLL+ +RV S P + Y +
Sbjct: 78 LYPKDDWQALLCDEVMDAAEDISTRIAHTIDLAEDAKK-KAREELVAGRITRYLEQFQARLKAAGGEYFADQRLTVADLKIFIWVRWLRAGVLDHIPKDLVDRVAPLLVKHSERVASHPGVAEYYRR 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72213.14892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72213.14892.1 >prot_H-elongata_contig72213.14892.1 ID=prot_H-elongata_contig72213.14892.1|Name=mRNA_H-elongata_contig72213.14892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp IYPTNHVEAAYADATVDTVTDMHFRLAPSLQEKDHTKKLKLRKDLVETYLback to top mRNA from alignment at H-elongata_contig72213:1478..3129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72213.14892.1 ID=mRNA_H-elongata_contig72213.14892.1|Name=mRNA_H-elongata_contig72213.14892.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1652bp|location=Sequence derived from alignment at H-elongata_contig72213:1478..3129+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72213:1478..3129+ >mRNA_H-elongata_contig72213.14892.1 ID=mRNA_H-elongata_contig72213.14892.1|Name=mRNA_H-elongata_contig72213.14892.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig72213:1478..3129+ (Himanthalia elongata Himel1 dioecious)back to top |