mRNA_H-elongata_contig72062.14883.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72062.14883.1
Unique NamemRNA_H-elongata_contig72062.14883.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: D8LEE3_ECTSI (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE3_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 4.390e-171
Identity = 250/300 (83.33%), Postives = 276/300 (92.00%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDTRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GP+VEKLSPLV S MPILIGLM+DPHVMVKDSATWTIGKICELHGPSIPAD L PLVEALL+ALKD+PRVCSKACFALHNFG+QFED+RDA++N LSPYL ALVQELL+ATQR D +DANLRSEAVEAMNVL+KNSARD  EVVRSTLQVVLS LEQSFS+ +LTAEDRD +QGLQSLLCG+LQVI +K GKEV+PY+DRIMNIL+EVFKNKQAVAQEEAFMAV ALADQME  FI YMEAF+P+L QGLSNN +YQVCIVATGVVGDLCRALEKD+LPY +HIM WLM NLEGA+INR
Sbjct:  394 EGPTVEKLSPLVQSAMPILIGLMRDPHVMVKDSATWTIGKICELHGPSIPADVLTPLVEALLLALKDTPRVCSKACFALHNFGDQFEDSRDAETNALSPYLTALVQELLLATQRDDGSDANLRSEAVEAMNVLIKNSARDMVEVVRSTLQVVLSQLEQSFSAPVLTAEDRDRLQGLQSLLCGNLQVICIKFGKEVVPYSDRIMNILVEVFKNKQAVAQEEAFMAVGALADQMEKAFINYMEAFLPILTQGLSNNAEYQVCIVATGVVGDLCRALEKDILPYCEHIMVWLMFNLEGANINR 693          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A7R9Z6T5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z6T5_9STRA)

HSP 1 Score: 276 bits (706), Expect = 5.090e-85
Identity = 143/304 (47.04%), Postives = 197/304 (64.80%), Query Frame = 1
Query:    4 GPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALL-MALKDSPRVCSKACFALHNFGEQFED---TRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGK-EVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            GPS E + P V+  +P+L+  + D H +VKD+  WTIG+ICELH   IP +    LV  L+   L + PRV ++ACFALHN    F     T +  +N LSPY+QAL+Q L+    RGDAT+ANLR  A+EAM +L++NSA D   ++   L V++  L QSFS Q+LT ED++  +GLQ LLCG +QV+ +KL K E++PYAD IM  L++V ++K A   EEAF A SA+ DQME  F KYM A  P L+ GL N E Y VC +A G+VGD+ RA+E  + PY   IM  L+ +L+  +++R
Sbjct:  167 GPSGESIGPYVNQSIPVLLAALSDQHELVKDTTAWTIGRICELHVRQIPEETFPTLVNGLMGKLLTEPPRVSNQACFALHNLAAAFAGDPATEENGTNALSPYMQALLQTLMQVCDRGDATEANLRIAAIEAMGILIQNSAADVRPLLVQLLPVIVDRLAQSFSIQVLTNEDKEMKEGLQGLLCGLIQVLCMKLEKAELLPYADDIMTNLLQVLQSKNATCHEEAFSATSAVVDQMEGDFEKYMSALQPFLMMGLRNFEAYHVCTIAVGLVGDIARAIEVKIQPYCDDIMSALLQSLQNQTLHR 470          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: F0YL50_AURAN (Importin N-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL50_AURAN)

HSP 1 Score: 275 bits (703), Expect = 3.330e-83
Identity = 137/301 (45.51%), Postives = 196/301 (65.12%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDT-RDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GP  E L+  V + MP+L+  + D HV+VKD+  WT+ +ICELH   IP   L PL+E L  AL DS RV ++ACFA+HN  + FE   +  ++N LSP+   L+ +LL AT+RGD  D NLR +A EA+N+L++N A DT  +V   LQVVL  L  +FS  I++ +D+D    LQSLLC  +QVI+  + K+++P+ D  M +L +V  N+ AVA EEAFMA+ A+A  ++  F KYM  F P+L++GL N  ++QVC  A G  GD+CRALE  +LPY   I+  L+ NL+  ++NR
Sbjct:  402 EGPKPETLAGPVQTAMPVLVHALNDEHVLVKDTTAWTLARICELHAQRIPQGYLQPLIERLSGALHDSSRVAAQACFAIHNLAQAFEHAPKHGETNALSPFFHPLLTQLLAATERGDWQDHNLRGQAYEAVNMLIQNHAPDTRPIVVQVLQVVLQRLHATFSMAIVSQDDKDERDQLQSLLCSVVQVITRGIDKDIMPFCDHTMTLLFKVLNNQNAVASEEAFMAIGAVASTIDREFEKYMVDFFPLLVKGLRNYAEWQVCSAAVGTTGDICRALEIQLLPYCDEIVRCLLENLQNPALNR 702          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A7S3ZP83_9STRA (Hypothetical protein n=7 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP83_9STRA)

HSP 1 Score: 277 bits (708), Expect = 3.870e-83
Identity = 139/300 (46.33%), Postives = 200/300 (66.67%), Query Frame = 1
Query:    4 GPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDT-RDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            GP  E L+  V + MP+L+  +KD H +VKD+A WT+G+ICELH   IP   L PLVE+L  AL+DS RV S++CFALHN  + FE   R  ++N LSP+ + L+ +LL AT+R D  D NLR +A EA+N+L++N ARD   VV   +QVVL  L  +FS+ +++ +D++    LQSLLC  +QVI+  + K++ P+ D I+ +L++V  N+ A+A EEAFMA+ A+A  +E  F KYM  F P LI+GL N  D+QVC  + G  GD+CRALE  +LPY   I+  L+ +L+  ++NR
Sbjct:  414 GPKPELLTDPVQTAMPVLVRTLKDNHTLVKDTAAWTLGRICELHAQRIPQGYLQPLVESLGGALQDSARVASQSCFALHNLAQAFERAPRSRETNALSPFFRPLLTQLLAATERRDWQDHNLRGQAYEAVNMLIQNHARDMRPVVLEVMQVVLQRLHSTFSTVVVSQDDKEERYQLQSLLCSVMQVITRAVDKDIEPFCDHIVALLLQVLNNEHAIASEEAFMALGAIASTVEQAFDKYMGDFFPFLIKGLRNYADWQVCSASVGTAGDVCRALESRILPYCDEIVRCLLEDLQNPTLNR 713          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A835YZD7_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD7_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.830e-82
Identity = 150/300 (50.00%), Postives = 198/300 (66.00%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDTRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GPS +KLSPLV   MP+L+  M+D      D       + C    P+        LVE L+ AL   P+V ++A +ALH F E  E  RDA SN +SPY   +VQ+LL    R D  D NLR    EAMN+L++NSA D   VV  TL++VL+ L  SF+  +L+ +DR+  QGLQSLLCG++QVI  K+ +EV PY D+IM +L++VF +K A+AQEEAFMA  ALADQ+E  F KYM AF P+L+QGLSN+E+YQVCIVA GVVGDLCRAL+  +L Y+  I+  L+ NL+  +INR
Sbjct:  394 EGPSPDKLSPLVRGAMPVLLTAMRDS---TSDYHVLIYRRCCLQLFPT--------LVENLVQALSLCPKVAARASYALHMFAEASEGQRDAPSNAISPYFSVVVQKLLQVIMREDWADDNLRVSGTEAMNMLIQNSADDVRPVVVETLKMVLNMLAASFNMPLLSNDDREKQQGLQSLLCGTIQVICPKIKQEVAPYGDQIMTLLLKVFGSKHAIAQEEAFMAAGALADQLERDFAKYMNAFAPILVQGLSNHEEYQVCIVAVGVVGDLCRALDTQMLQYSDEIVRCLLHNLQNPTINR 682          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: F0YNG8_AURAN (Importin N-terminal domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNG8_AURAN)

HSP 1 Score: 270 bits (689), Expect = 1.870e-80
Identity = 135/301 (44.85%), Postives = 198/301 (65.78%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDT-RDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GP  + L+  V + MP+LI  ++D H++VKD+  WT+ +ICELH   IP   L PLVE L  AL+DS RV ++ACFA+HN  + FE   R  ++N LSP+   L+ +LL AT+R D  D NLR +A EA+N+L++N A DT  VV   +QVVL  L  +FS  I++ +D++    LQSLLC  +QVI+  + +E+IP+ D I+ +L++V  N+ AVA EEAFMA+ A+A  ++ GF KY+    P L++GL N  ++QVC  A G  GD+CRALE  +LPY   I+  L+ +L+  ++NR
Sbjct:  404 EGPKPDTLAGPVQTAMPVLIRSLRDEHILVKDTTAWTLARICELHAQRIPQGYLQPLVEQLSNALQDSSRVAAQACFAVHNLAQAFEHAPRHGETNALSPFFHPLLTQLLAATERRDWQDHNLRGQAYEAVNMLIQNHALDTRPVVIQVMQVVLQRLHGTFSMPIISQDDKEERDQLQSLLCSVMQVITRGIDREIIPFCDHIVTLLLQVLNNQNAVASEEAFMAMGAVASTIDHGFEKYIGELFPFLLKGLRNYVEWQVCSAAVGTTGDICRALEIQILPYCDDIICCLLEDLQNPALNR 704          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A8J5XJG5_DIALT (Importin N-terminal domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJG5_DIALT)

HSP 1 Score: 268 bits (686), Expect = 5.250e-80
Identity = 137/310 (44.19%), Postives = 194/310 (62.58%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHG-------PSIPADALNPLVE---ALLMALKDSPRVCSKACFALHNFGEQFEDTRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GPS   L PLV   +P+++ LM+D  V V+D+A WTIG++C+LH        P +     + L++    LL AL+D PRV    C+A+HN  E  E    A S+ LSPY   +V+ L+  T+R D+ + NLRS + EA+N +L  SA DT   +R  +  +   LE++FS QI++A+DR+    LQ LLCG+LQV+  KLG EV+ +ADR+M + +EVF +K A   EEA MAV A+A+ +   F KYM  F P LI GL N+E +QVC VA GV+GDLCRALE  + PY   ++  LM NL+  ++NR
Sbjct:  394 EGPSKAVLEPLVTQAVPVIVTLMRDTSVQVRDTAAWTIGRVCDLHAGTLSTIAPGMHTTYTHELLKPGGVLLEALRDEPRVACNVCWAIHNLAESLEVAEGAQSSQLSPYFLEMVRSLIQTTERADSAENNLRSSSFEALNTVLSQSATDTMANLREIVPYLCDKLERTFSMQIVSADDREEQNELQGLLCGTLQVVVQKLGSEVVAFADRLMQLFLEVFNSKNATVHEEALMAVGAVANGVARQFEKYMPHFRPFLILGLQNHEQHQVCSVAVGVIGDLCRALEASIFPYCDELVTLLMQNLQNPNLNR 703          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A6U3SM86_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SM86_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.520e-79
Identity = 141/305 (46.23%), Postives = 198/305 (64.92%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMAL-KDSPRVCSKACFALHNFGEQF---EDTRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKE-VIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GPS+E + P V+  +P+L+  + DPHV+VKD+  W IG+ICELH  +IP +    LV  L+  L  ++PRV S+A FALHN    F   E    + +N LS Y+ AL+Q LL  T R DA ++NLR  A EA++VL++NSA D   ++   L V++  L QSFS  +LT EDR+  +GLQ LLCG +QVI+LK+ KE ++P+AD IM  L++V + K A   EEAF A SA+ADQME  F KY+ A  P L+ GL N E Y VC +A G+VGD+ R++E  + P+   IM  LM +L+  S++R
Sbjct:  404 EGPSMEIIGPYVNQSIPVLLNALSDPHVLVKDTTAWAIGRICELHVRAIPEETFPQLVNVLMSKLLSETPRVSSQASFALHNLAAAFAGDEAAAASGTNALSAYMPALLQTLLQVTDRKDADESNLRVAAFEAVSVLIQNSAPDCKPLLLQLLPVIIGRLSQSFSLPVLTNEDREQKEGLQGLLCGLIQVITLKVTKEDIMPHADSIMTNLLQVLQTKNATCHEEAFSATSAIADQMEADFEKYLLALQPFLMMGLQNFEAYHVCTIAVGLVGDIARSVEAKIQPFCDEIMSALMQSLQNQSLHR 708          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A7S2A9G2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9G2_TRICV)

HSP 1 Score: 266 bits (680), Expect = 4.110e-79
Identity = 139/305 (45.57%), Postives = 197/305 (64.59%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMAL-KDSPRVCSKACFALHNFGEQFEDTRDAD---SNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGK-EVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GPS+E + P V+  +P+L+  + DPH +VKD+  WTIG+ICELH  +IP +    LV  L+  L  + PRV +++CFALHN    F     AD   +N LSPY+  L+Q LL    R DA ++NLR  A+EA++VL++NSA D   ++   L V++  L QSF+   LT EDR+  +GLQ LLCG +QV+SLK+ + EV+P+AD IM  L++V + K A   EEAF A SA+ADQ+E  F KYM A  P L+ GL N E Y VC +A G+VGD+ RA+E  + P+   IM  L+ +L+  S++R
Sbjct:  404 EGPSLEVIGPYVNQSIPVLLAALSDPHDLVKDTTAWTIGRICELHVRAIPEETFPTLVNGLMGKLISEPPRVSNQSCFALHNLAAAFAGDTAADQSGTNALSPYMPTLLQTLLQVCDREDAAESNLRIAAMEAISVLIQNSAPDCKALLIQLLPVIVDRLAQSFNMPTLTNEDREQKEGLQGLLCGLIQVLSLKMDRSEVLPFADSIMTNLLQVLQTKNATCHEEAFSATSAVADQLESDFEKYMAALQPFLMMGLRNFEAYHVCTIAVGLVGDIARAVESKIQPHCDDIMSALLQSLQNQSLHR 708          
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Match: A0A7S1BFW6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFW6_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.000e-77
Identity = 134/301 (44.52%), Postives = 198/301 (65.78%), Query Frame = 1
Query:    1 QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPADALNPLVEALLMALK-DSPRVCSKACFALHNFGEQFEDTRDADSNHLSPYLQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQVVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYADRIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQGLSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR 900
            +GPS +K+   V+  +P+LI  +KDPH MVKD++ WT+G+IC+LH   IP +AL  LV+ L   L  +SP V SKACFALHN    F D     SN LSPY+  L++ LL  T+R D  ++NLR  A EA+N+L+KNSA+D   ++   L +++  L+ +FS  +LT E+++  +GLQ LLCG +QV +  LG +V P+A+ IM  L++VF+++ A A  EA++A++ALA+++E  F  YM      L+ GL N E YQ+C VA GVVGD+ RA+E  + P+   IM  L+ NL+  ++NR
Sbjct:  396 EGPSTDKIGQFVNQSIPVLIEALKDPHPMVKDTSAWTLGRICDLHVRCIPNEALPQLVQGLASVLMTESPSVSSKACFALHNLAAAF-DAETGSSNALSPYVGKLLETLLAVTEREDWEESNLRFSAYEAVNMLIKNSAQDCKPILIQMLPLIIERLKATFSMTVLTNEEKEAKEGLQGLLCGVIQVTTQHLGSDVGPFANSIMENLLKVFESRNATAHGEAYLAIAALANELEGHFNIYMSHLHAYLMMGLRNAEAYQICSVAVGVVGDIARAIESQIQPFCNEIMTSLLENLQNPNLNR 695          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72062.14883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE3_ECTSI4.390e-17183.33Importin N-terminal domain-containing protein n=2 ... [more]
A0A7R9Z6T5_9STRA5.090e-8547.04Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
F0YL50_AURAN3.330e-8345.51Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3ZP83_9STRA3.870e-8346.33Hypothetical protein n=7 Tax=Pelagomonas calceolat... [more]
A0A835YZD7_9STRA1.830e-8250.00Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
F0YNG8_AURAN1.870e-8044.85Importin N-terminal domain-containing protein n=1 ... [more]
A0A8J5XJG5_DIALT5.250e-8044.19Importin N-terminal domain-containing protein n=2 ... [more]
A0A6U3SM86_9STRA1.520e-7946.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2A9G2_TRICV4.110e-7945.57Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1BFW6_9STRA1.000e-7744.52Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72062contigH-elongata_contig72062:661..3149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.0
Seed ortholog evalue7.6e-142
Seed eggNOG ortholog2880.D8LEE3
Preferred nameKPNB1
KEGG koko:K14293
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
GOsGO:0000003,GO:0000060,GO:0000070,GO:0000166,GO:0000226,GO:0000278,GO:0000280,GO:0000737,GO:0000819,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005048,GO:0005085,GO:0005087,GO:0005088,GO:0005215,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005737,GO:0005783,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006605,GO:0006606,GO:0006607,GO:0006610,GO:0006612,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006913,GO:0006915,GO:0006921,GO:0006928,GO:0006955,GO:0006996,GO:0006997,GO:0006999,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007079,GO:0007080,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0008092,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008536,GO:0008565,GO:0008610,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009790,GO:0009792,GO:0009889,GO:0009987,GO:0010494,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016192,GO:0017016,GO:0017038,GO:0017076,GO:0019001,GO:0019048,GO:0019054,GO:0019058,GO:0019216,GO:0019218,GO:0019222,GO:0019439,GO:0019637,GO:0019894,GO:0019899,GO:0019904,GO:0022402,GO:0022411,GO:0022607,GO:0023052,GO:0030141,GO:0030162,GO:0030262,GO:0030953,GO:0031072,GO:0031090,GO:0031122,GO:0031224,GO:0031267,GO:0031291,GO:0031323,GO:0031399,GO:0031410,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032268,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032940,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034655,GO:0034774,GO:0035556,GO:0035580,GO:0035639,GO:0035770,GO:0035821,GO:0036094,GO:0036230,GO:0036464,GO:0040001,GO:0042119,GO:0042277,GO:0042581,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044003,GO:0044068,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044766,GO:0044877,GO:0045017,GO:0045055,GO:0045184,GO:0045321,GO:0045495,GO:0045540,GO:0046470,GO:0046474,GO:0046483,GO:0046486,GO:0046700,GO:0046794,GO:0046872,GO:0046890,GO:0046903,GO:0046907,GO:0046914,GO:0046931,GO:0048285,GO:0048856,GO:0050000,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051020,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051225,GO:0051233,GO:0051234,GO:0051246,GO:0051276,GO:0051292,GO:0051293,GO:0051303,GO:0051305,GO:0051310,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051879,GO:0060188,GO:0060205,GO:0060255,GO:0060293,GO:0061608,GO:0062012,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071782,GO:0071840,GO:0072594,GO:0072657,GO:0072686,GO:0075733,GO:0080090,GO:0090150,GO:0090181,GO:0090304,GO:0090305,GO:0090307,GO:0090407,GO:0097159,GO:0097164,GO:0097194,GO:0097367,GO:0097435,GO:0097708,GO:0098772,GO:0098813,GO:0098827,GO:0099503,GO:0101002,GO:0106118,GO:0140014,GO:0140104,GO:0140142,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902579,GO:1902850,GO:1902930,GO:1903047,GO:1903320,GO:1904813,GO:1990023,GO:1990904
EggNOG free text desc.ribosomal protein import into nucleus
EggNOG OGsCOG5215@1,KOG1241@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionImportin subunit beta
Ec32 orthologEc-00_001960.1
Exons4
Model size903
Cds size903
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72062.14883.1prot_H-elongata_contig72062.14883.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72062 661..3149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931122.1795242-CDS-H-elongata_contig72062:660..7891622931122.1795242-CDS-H-elongata_contig72062:660..789Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 661..789 -
1691679707.2264416-CDS-H-elongata_contig72062:660..7891691679707.2264416-CDS-H-elongata_contig72062:660..789Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 661..789 -
1622931122.1936479-CDS-H-elongata_contig72062:1601..18201622931122.1936479-CDS-H-elongata_contig72062:1601..1820Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 1602..1820 -
1691679707.236257-CDS-H-elongata_contig72062:1601..18201691679707.236257-CDS-H-elongata_contig72062:1601..1820Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 1602..1820 -
1622931122.2034187-CDS-H-elongata_contig72062:2178..23841622931122.2034187-CDS-H-elongata_contig72062:2178..2384Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 2179..2384 -
1691679707.2443008-CDS-H-elongata_contig72062:2178..23841691679707.2443008-CDS-H-elongata_contig72062:2178..2384Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 2179..2384 -
1622931122.254695-CDS-H-elongata_contig72062:2800..31491622931122.254695-CDS-H-elongata_contig72062:2800..3149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 2801..3149 -
1691679707.252197-CDS-H-elongata_contig72062:2800..31491691679707.252197-CDS-H-elongata_contig72062:2800..3149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72062 2801..3149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72062.14883.1

>prot_H-elongata_contig72062.14883.1 ID=prot_H-elongata_contig72062.14883.1|Name=mRNA_H-elongata_contig72062.14883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
QGPSVEKLSPLVHSGMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIP
ADALNPLVEALLMALKDSPRVCSKACFALHNFGEQFEDTRDADSNHLSPY
LQALVQELLMATQRGDATDANLRSEAVEAMNVLLKNSARDTTEVVRSTLQ
VVLSHLEQSFSSQILTAEDRDTVQGLQSLLCGSLQVISLKLGKEVIPYAD
RIMNILMEVFKNKQAVAQEEAFMAVSALADQMEMGFIKYMEAFMPVLIQG
LSNNEDYQVCIVATGVVGDLCRALEKDVLPYTQHIMGWLMVNLEGASINR
*
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mRNA from alignment at H-elongata_contig72062:661..3149-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72062.14883.1 ID=mRNA_H-elongata_contig72062.14883.1|Name=mRNA_H-elongata_contig72062.14883.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2489bp|location=Sequence derived from alignment at H-elongata_contig72062:661..3149- (Himanthalia elongata Himel1 dioecious)
CAGGGCCCGAGCGTTGAGAAGTTGTCCCCGCTGGTGCACTCGGGCATGCC AATCCTGATCGGCCTGATGAAGGACCCCCACGTGATGGTAAAGGACAGCG CTACGTGGACGATCGGCAAGATCTGCGAGCTGCACGGGCCCTCGATCCCC GCGGATGCCCTGAACCCCCTAGTGGAGGCGCTGCTAATGGCCCTCAAGGA CTCCCCCCGCGTGTGCTCTAAGGCGTGCTTCGCGCTGCACAACTTCGGGG AGCAGTTTGAGGACACTCGTGACGCGGACTCGAACCACCTGTCTCCGTAC CTCCAGGCTTTGGTGCAGGAGCTCTTGATGGCGACACAAAGGGGAGACGG TAAGAAGGGGGAAAGAGGACGGAAAAGGGCACAGTCTTATGGCTTCGTGT TCTGTCCTTGATTGCGGTGGTGTGTGTGTGCGTGTTTAGGGGGGGGGTTA AGTGTGTTTTCGCCTCGCCAGCTGAGCCGCCAATGCTGCACAGGGGTTTT CCTAGAGTGGGTTTACGAGTCTCTCATATTTGTTGCTTGTGTTAGTTTGA TTGTTTTTTTTAGAGGGTAGAGAATAGGGCGAGAGGGCGTGAGTGTTTGT ATGTGTGTATGTTTGTATGGCAACCCGGCAAGGCGCGGTTTCCGTGCGTC CCGTCCTTGCTTTTCTCCGAAGTACTTCTTCTAATCATTCAAATCCTTAT TTTCCCTTCCCCTCCCTCCCTCCCCGGGCATGAAACGCCTGCTTGTGTCC TTGGAACACTACCAGCGACCGACGCCAACTTGCGCAGCGAGGCGGTAGAA GCGATGAACGTTCTCTTGAAGAACTCCGCGAGGGACACAACGGAAGTGGT GCGCTCGACGCTGCAGGTGGTTCTGTCCCACTTGGAACAGTCGTTCTCCT CGCAAATCCTTACCGCGGAGGACAGGGATACGGTTCAGGGGCTACAGTCT CTGCTCTGCGGGAGCCTTCAGGTCGGTGATCCAACCAAAGCGGACTCTTT TTGGTTGCTTGCTTCTGATGCAGCAGTGATCGATCAATCCATCGATGCAT CCAATGTTTGTTACCCTATATTATACTATTATTAGTATACACCCACCATG GCTTTTCGGGTAAAAGTACCTTTCTGGGAGGGGGGGTGCAATCCTGTCCC GAAACAGGACTAGGGCGTTGCCCTCCCGAGCTCACGGGAGGGCGTGCTTG CATCAGCACTGTTGGCGACTTGGTTACTGCCGCGTATCTGTGTTTGTTGC GTTACGGCGTTTGGCGCTTGACGTGCCCTCGGGCCACGGATTTTGCCCCT TCTCTTTTTCCGCGTGGGGGAGGGGACAGGTGATCAGCCTTAAGCTGGGC AAGGAGGTGATACCGTATGCCGACCGCATCATGAACATCTTGATGGAAGT TTTCAAGAATAAGCAGGCGGTGGCGCAAGAAGAGGCTTTTATGGCGGTGA GCGCCCTGGCCGATCAGATGGAGATGGGCTTCATCAAGTACATGGAGGCG TTTATGCCCGTCCTTATCCAGGGGCTATCGAACAACGAAGATTACCAGGT GCGTTCAGGACAGGCTCTTTTATGTTCGATACGACGAGAGCCCCATCTGA GAAACACCTTTCGAGGGAGATGATCCCCAGACCTCGTACATCCTTCTCTA TTTGCAAAGGAGAGACTTGGGGAGGGGTAAAGATATTTTGTAAAGATATT TTGTTCCTCTGTTGCAGAGGGAGGCGTGCTTGGGAGGGGGGTGTTCTCAA GCGAGAATCTTCGTGATCTGCCCAACGTCTTGGGTCAATAATAGTGAGCA GGATTGCTGTACGTGATCTGTACAATGCAGCAGTAAAACATTTATCGTGA CGTCAGCATACGATCCATACAGGCTACGTATCTATGTGTATGTAGATGGC CGATGTTGCCGTCGTACATGGGCTTTATTAATTAGCAGTACGATAGAGAA GAAAAAAAAAAGCATCTCGCTTTCGGCAGCGTATCACGTACACACTCCCT GCAAAGAGCGCACGATGTTTTGTCTTTTTTCCTTTTTTTTATATTTTTAA GAGGAAAGGAGCGGAGCGGAACGGAGGGTGTGGCGAGTTGGTTTTGTGTG CCGGAATTTATTTGAAGCTGTTCCATAGCCTTTGTGGTGATTGTTATGTT TTTACTCAGCAAAAACCTTTGTGATGATTTCCTCGAGGAAAGGGACGGAA TGGACGGGAGAGACAAAAAGCGTACTCTTCTTTTTAATCCCCCCTTTTTT TGGTGGTTTGTCCCCTCTCTCTCTCTCTCGTTCTAATGTAATGCGATGTT GTTGTTTTTTCTGTGCCGTGTCGTGGGGTGGGGTGGCGTTTTCCCCCCGG GGGAAAAAAGGTGTGCATCGTGGCCACAGGCGTTGTCGGAGACCTCTGCC GCGCTCTGGAGAAGGATGTTCTCCCTTACACTCAGCACATCATGGGCTGG CTCATGGTCAACCTCGAGGGGGCCAGCATTAACCGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig72062:661..3149-

>mRNA_H-elongata_contig72062.14883.1 ID=mRNA_H-elongata_contig72062.14883.1|Name=mRNA_H-elongata_contig72062.14883.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig72062:661..3149- (Himanthalia elongata Himel1 dioecious)
CAGGGCCCGAGCGTTGAGAAGTTGTCCCCGCTGGTGCACTCGGGCATGCC
AATCCTGATCGGCCTGATGAAGGACCCCCACGTGATGGTAAAGGACAGCG
CTACGTGGACGATCGGCAAGATCTGCGAGCTGCACGGGCCCTCGATCCCC
GCGGATGCCCTGAACCCCCTAGTGGAGGCGCTGCTAATGGCCCTCAAGGA
CTCCCCCCGCGTGTGCTCTAAGGCGTGCTTCGCGCTGCACAACTTCGGGG
AGCAGTTTGAGGACACTCGTGACGCGGACTCGAACCACCTGTCTCCGTAC
CTCCAGGCTTTGGTGCAGGAGCTCTTGATGGCGACACAAAGGGGAGACGC
AGGGCCCGAGCGTTGAGAAGTTGTCCCCGCTGGTGCACTCGGGCATGCCA
ATCCTGATCGGCCTGATGAAGGACCCCCACGTGATGGTAAAGGACAGCGC
TACGTGGACGATCGGCAAGATCTGCGAGCTGCACGGGCCCTCGATCCCCG
CGGATGCCCTGAACCCCCTAGTGGAGGCGCTGCTAATGGCCCTCAAGGAC
TCCCCCCGCGTGTGCTCTAAGGCGTGCTTCGCGCTGCACAACTTCGGGGA
GCAGTTTGAGGACACTCGTGACGCGGACTCGAACCACCTGTCTCCGTACC
TCCAGGCTTTGGTGCAGGAGCTCTTGATGGCGACACAAAGGGGAGACGCG
ACCGACGCCAACTTGCGCAGCGAGGCGGTAGAAGCGATGAACGTTCTCTT
GAAGAACTCCGCGAGGGACACAACGGAAGTGGTGCGCTCGACGCTGCAGG
TGGTTCTGTCCCACTTGGAACAGTCGTTCTCCTCGCAAATCCTTACCGCG
GAGGACAGGGATACGGTTCAGGGGCTACAGTCTCTGCTCTGCGGGAGCCT
TCAGCGACCGACGCCAACTTGCGCAGCGAGGCGGTAGAAGCGATGAACGT
TCTCTTGAAGAACTCCGCGAGGGACACAACGGAAGTGGTGCGCTCGACGC
TGCAGGTGGTTCTGTCCCACTTGGAACAGTCGTTCTCCTCGCAAATCCTT
ACCGCGGAGGACAGGGATACGGTTCAGGGGCTACAGTCTCTGCTCTGCGG
GAGCCTTCAGGTGATCAGCCTTAAGCTGGGCAAGGAGGTGATACCGTATG
CCGACCGCATCATGAACATCTTGATGGAAGTTTTCAAGAATAAGCAGGCG
GTGGCGCAAGAAGAGGCTTTTATGGCGGTGAGCGCCCTGGCCGATCAGAT
GGAGATGGGCTTCATCAAGTACATGGAGGCGTTTATGCCCGTCCTTATCC
AGGGGCTATCGAACAACGAAGATTACCAGGTGATCAGCCTTAAGCTGGGC
AAGGAGGTGATACCGTATGCCGACCGCATCATGAACATCTTGATGGAAGT
TTTCAAGAATAAGCAGGCGGTGGCGCAAGAAGAGGCTTTTATGGCGGTGA
GCGCCCTGGCCGATCAGATGGAGATGGGCTTCATCAAGTACATGGAGGCG
TTTATGCCCGTCCTTATCCAGGGGCTATCGAACAACGAAGATTACCAGGT
GTGCATCGTGGCCACAGGCGTTGTCGGAGACCTCTGCCGCGCTCTGGAGA
AGGATGTTCTCCCTTACACTCAGCACATCATGGGCTGGCTCATGGTCAAC
CTCGAGGGGGCCAGCATTAACCGGTAAGTGTGCATCGTGGCCACAGGCGT
TGTCGGAGACCTCTGCCGCGCTCTGGAGAAGGATGTTCTCCCTTACACTC
AGCACATCATGGGCTGGCTCATGGTCAACCTCGAGGGGGCCAGCATTAAC
CGGTAA
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