mRNA_H-elongata_contig7159.14832.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.200e-48 Identity = 86/166 (51.81%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSMERGKGGKAAVKKDAYALKQKGMKQMLWERGLYVD 498
G+WG+ +FEEQ DVMD +E ++P Q V EVDHS+GH K + GLHV+NMNVK+GGKQK LRDS MT+ CLGP + MY +WST+F G VD KL G+ + +FA APPPF++WDA KD K K VK + Y K KG++Q LWERG + D
Sbjct: 95 GYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDK----KNAKGKVK-EGYEGKAKGVRQYLWERGWWKD 253
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 166 bits (419), Expect = 6.480e-47 Identity = 85/166 (51.20%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSMERGKGGKAAVKKDAYALKQKGMKQMLWERGLYVD 498
G+WG+ +FEEQ DVMD +E ++P Q V EVDHS+GH K + GLHV+NMNVK+GGKQK LRDS MT+ CLGP + MY +WST+F G VD KL G+ + +FA APPPF++W A KD K K VK + Y K KG++Q LWERG + D
Sbjct: 69 GYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKDK----KNAKGKVK-EGYEGKAKGVRQYLWERGWWKD 227
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.170e-45 Identity = 85/166 (51.20%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSMERGKGGKAAVKKDAYALKQKGMKQMLWERGLYVD 498
G+WG+ FEEQ DV+D +E ++P Q V EVDHS+GH K + GLHV+NMNVK+GGKQK LRDS MT+GCLG + MY +WST+F G VD KL G+ + +FA APPPF++WDA KD K K VK + Y K KG++Q LWERG + D
Sbjct: 204 GYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGLEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDK----KNAKGKVK-EGYEGKAKGVRQYLWERGWWKD 362
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.430e-41 Identity = 86/188 (45.74%), Postives = 108/188 (57.45%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKD-SMER--------------------GKGGKAAVK-KDAYALKQKGMKQMLWERGLYVD 498
G+WG+ EF+EQ V EP Q V E+DHS+GH + + GLHV NMNVK+GGKQK LRD+ MT+GCLGP + MYL+ KWSTEF G D+KL+ G+ + +FAA +PPPFY+WDA KD + R G G K K K+ Y K KG KQ LWE G + D
Sbjct: 548 GYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGA--EVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKXXXXXXXXXXXXDVAADGAGTKPRDKIKEGYEGKAKGSKQYLWEWGWWKD 733
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 152 bits (384), Expect = 4.290e-40 Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSME-RGKGGKAA 423
G+WG+ +FEEQ DVMD +E ++P Q V EVDHS+GH K + GLHV+NMNVK+GGKQK LRDS MT+ CLGP + MY +WST+F G VD KL G+ + +FA APPPF++WDA KD+ RG+ K A
Sbjct: 359 GYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDTKNARGRSRKGA 498
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 147 bits (371), Expect = 6.640e-38 Identity = 77/174 (44.25%), Postives = 102/174 (58.62%), Query Frame = 1
Query: 46 MDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSM------------------ERGKGGKAAVK-----KDAYALKQKGMKQMLWERGLYVD 498
+D ++V EP+ Q V E+DHS+GH + + GLHV NMNVK+GGKQK LRD+ MT+GCLGP + MYL+ KWSTEF G D+KL+ G+ + +FAA +PPPFY+WDA KD + G A K K+ Y K KG K+ LWERG + +
Sbjct: 969 LDVLDVFEPNMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGA--EVYDMKLKVGDTQTSTFAAGSPPPFYEWDAPRKDVKVARKAKRXXXXXXXXXXGDEGATDGAGTKPMDMIKEGYEGKAKGSKKYLWERGWWKE 1140
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.900e-37 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSMERGKGGKAAVK 429
G+WG+ +FEEQ DVMD +E ++P Q V EVDHS+GH K + GLHV+NMNVK+GGKQK LR S MT+ CLGP + +Y +WST+F G VD KL G+ + +FA APPPF++WDA KD K K VK
Sbjct: 573 GYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRLSVMTEECLGPEEAKIYFANGRWSTKFSEGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDK----KNAKGKVK 709
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE) HSP 1 Score: 144 bits (362), Expect = 9.220e-37 Identity = 68/130 (52.31%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKD 390
G+ G+ EF+EQ DV+D + V EP Q V E+DHS+GH + + GLHV NMNVK+GGKQK LRD+ +T+ CLGP + MYL+ KWSTEF G D+KL+ G+ + +FA +PPPFY+WDA KD
Sbjct: 498 GYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKYGGKQKVLRDTVITEWCLGPEEGKMYLSNGKWSTEFPEGA--EVYDMKLKVGDTQTSTFADGSPPPFYEWDAPGKD 625
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 130 bits (328), Expect = 3.910e-32 Identity = 66/129 (51.16%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 112 HAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEVKRMSFAADAPPPFYDWDAKAKDSMERGKGGKAAVKKDAYALKQKGMKQMLWERGLYVD 498
H K + GLHV+NMNVK+GGKQK LRDS MT+GCLGP + MY +WST+F G VD KL G+ + +FA APPPF++WDA KD K K VK + Y K KG++Q LWERG + D
Sbjct: 715 HGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEGCLGPEEAKMYFANGRWSTKFREGAVC--VDQKLTVGQTQTSTFAVGAPPPFFEWDAPRKDK----KNAKGKVK-EGYEGKAKGVRQYLWERGWWKD 836
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.140e-30 Identity = 57/108 (52.78%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANMNVKWGGKQKPLRDSTMTKGCLGPRQVTMYLNGNKWSTEFIAGVTTRTVDLKLREGEV 324
G+WG+ EF+EQ D +D ++V EP Q V E+DHS+GH + + GLHV NMNVK+GGKQK LRD+ MT+GCLGP + MYL+ KWSTEF G + LK +G +
Sbjct: 699 GYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDTVMTEGCLGPEEAKMYLSNGKWSTEFTEGAEVYDMKLKAMKGRL 806 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7159.14832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7159.14832.1 >prot_H-elongata_contig7159.14832.1 ID=prot_H-elongata_contig7159.14832.1|Name=mRNA_H-elongata_contig7159.14832.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp GFWGFAEFEEQTIDVMDTVEVVEPSKQQVEEVDHSAGHAKYLDSGLHVANback to top mRNA from alignment at H-elongata_contig7159:9540..10039+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7159.14832.1 ID=mRNA_H-elongata_contig7159.14832.1|Name=mRNA_H-elongata_contig7159.14832.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=500bp|location=Sequence derived from alignment at H-elongata_contig7159:9540..10039+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7159:9540..10039+ >mRNA_H-elongata_contig7159.14832.1 ID=mRNA_H-elongata_contig7159.14832.1|Name=mRNA_H-elongata_contig7159.14832.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=996bp|location=Sequence derived from alignment at H-elongata_contig7159:9540..10039+ (Himanthalia elongata Himel1 dioecious)back to top |