mRNA_H-elongata_contig7142.14803.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7142.14803.1
Unique NamemRNA_H-elongata_contig7142.14803.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: D7G4Q1_ECTSI (DNA repair protein RAD51 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Q1_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 1.250e-199
Identity = 281/287 (97.91%), Postives = 286/287 (99.65%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            I+H T+RKLVEVKGIS+QKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQ+PLD+GGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD
Sbjct:   57 ISHCTIRKLVEVKGISEQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 343
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A836CHV0_9STRA (DNA repair and recombination protein Rad51A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV0_9STRA)

HSP 1 Score: 489 bits (1258), Expect = 4.380e-172
Identity = 248/305 (81.31%), Postives = 267/305 (87.54%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTE------------------VFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            +AH+T+R+L EVKGIS+Q+A KLKE  YKLVPIGFTTA+QHL QRQDLITLTTGSKELDKLL GGIETGSLTE                  VFGEFRTGKTQLCHTLCV CQLPLD GGGEGKAMYIDTE TFRPQRL AIA+R+GLN DDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLV+DSATAL+RTDY GRGELSERQMQLAQFLRQLTRMAEEFGVAVV+TNQVVANPDGMSFAKD+TKPIGGNI+AHASTTRLRLRK R +NR+CQVFDSPTL ESE QFS+   G++DP D
Sbjct:   57 VAHATMRRLTEVKGISEQRAIKLKEIAYKLVPIGFTTANQHLQQRQDLITLTTGSKELDKLLAGGIETGSLTELHRRHLLTHAARTPRAPQVFGEFRTGKTQLCHTLCVTCQLPLDLGGGEGKAMYIDTESTFRPQRLAAIAQRYGLNADDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVVDSATALFRTDYSGRGELSERQMQLAQFLRQLTRMAEEFGVAVVITNQVVANPDGMSFAKDATKPIGGNIMAHASTTRLRLRKGRAENRVCQVFDSPTLPESEAQFSLSDSGIQDPTD 361
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A7S1UHL6_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHL6_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 3.260e-168
Identity = 233/287 (81.18%), Postives = 264/287 (91.99%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            IA +T+R+L EVKG+SD KA KLK+  YK+ P+GF +A+QHL QR D+I+L+TGS+ELD+LL+GGIETGSLTEVFGEFRTGKTQLCHTLCV CQLPLD GGGEG+A+YIDTEGTFRP +L+AIAERFGLN DDVL+NVAYARA NSEQQ +LL+M+SAMMAEDRYALLV+DSATAL+RTDY GRGELSERQM +AQFLRQLTRMAEEFGVAVV TNQVVANPDGMSFAKD+TKPIGGNIIAHASTTRLR RK RG+NRICQVFDSPTL E++CQFS+GP GVEDPKD
Sbjct:  109 IAAATMRRLTEVKGVSDNKAQKLKDVAYKICPMGFISATQHLAQRADVISLSTGSRELDQLLQGGIETGSLTEVFGEFRTGKTQLCHTLCVTCQLPLDQGGGEGRALYIDTEGTFRPDKLSAIAERFGLNADDVLDNVAYARAQNSEQQTELLRMSSAMMAEDRYALLVVDSATALFRTDYTGRGELSERQMAMAQFLRQLTRMAEEFGVAVVYTNQVVANPDGMSFAKDATKPIGGNIIAHASTTRLRFRKGRGENRICQVFDSPTLPEADCQFSVGPAGVEDPKD 395
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: W7TKJ9_9STRA (DNA repair protein RAD51 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKJ9_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.080e-166
Identity = 235/287 (81.88%), Postives = 261/287 (90.94%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            I H+T+RKL ++KGISDQKA K+KE  YKLVP+GF TA+Q L  R+DLI L+TGSK+LD LL GG+ETGSLTE+FGEFRTGKTQLCHTLCV  QLP+D GGGEGKAMYIDTEGTFRPQRL AIAERFGL+ D VL+NVA+ARAHNSEQQMDLLKMASAMM+EDRYAL+V+DSATAL+RTDYCGRGELSERQMQLAQFLRQLTRM+EEFGVAVVLTNQVVANPDGMSFAKD TKPIGGNIIAHAS TRLRLRK RG+NRICQ++DSPTL E+E QFSIG  G+ED KD
Sbjct:   89 ITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGVAVVLTNQVVANPDGMSFAKDQTKPIGGNIIAHASHTRLRLRKGRGENRICQIYDSPTLPEAETQFSIGASGIEDAKD 375
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A6S8RTG3_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8RTG3_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 2.000e-155
Identity = 218/287 (75.96%), Postives = 255/287 (88.85%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            IA++T++ L +VKG+SD KA KL+E  YK+VP  FTTA+  L QRQ+++ L+TGSKELDKLLEGGIETGSLTE++GEFRTGKTQLCHTLCV  QLPLD GGGEGKAMYIDTEGTFRPQRL AIAER+G+  + VLENV YARAHNSEQQ +LLK A ++M+EDR++LLV+DSATALYRTDY GRGELSERQMQLAQFLR LTRM+ EFG+AVVLTNQVVANPDGMSFAKD+TKPIGGNIIAHAS TRL+L+KARG+NR+C+V DSP++AESE  FS+GP GVED K+
Sbjct:   60 IAYATLKSLCQVKGVSDAKAQKLREIAYKIVPSTFTTAAAELEQRQNMVQLSTGSKELDKLLEGGIETGSLTELYGEFRTGKTQLCHTLCVTAQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERYGVAAEMVLENVVYARAHNSEQQKELLKQACSLMSEDRFSLLVVDSATALYRTDYMGRGELSERQMQLAQFLRALTRMSAEFGIAVVLTNQVVANPDGMSFAKDATKPIGGNIIAHASHTRLQLKKARGENRVCKVIDSPSIAESEASFSVGPAGVEDAKE 346
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A1Z5KQ22_FISSO (DNA repair protein RAD51 homolog n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ22_FISSO)

HSP 1 Score: 441 bits (1135), Expect = 1.200e-153
Identity = 221/287 (77.00%), Postives = 248/287 (86.41%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            IAH+TVRKL EVKGIS+ K  KLKE    +VP+ F TA+  L  R+ L+TLTTGS ELDKLLEGGIETGS+TEVFGEFRTGKTQLCHTLC+ CQ+ +  GG EGKA+YIDTEGTFRP RL AIAERFGL+    LENVAYARAHNSE QM+LLKMA+A+MA+DRYALLV+DSATALYRTDY GRGELSERQMQ+AQFLRQLTR+AEEFGVAV +TNQVVA+PD MSFAKDSTKPIGGNI+AHASTTRLRLRK RGDNRIC VFDSPTL E++CQF++G  GV D  D
Sbjct:   57 IAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMAQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVASPDAMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADCQFAVGAQGVCDATD 343
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A7S3XMC0_HETAK (DNA repair protein RAD51 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMC0_HETAK)

HSP 1 Score: 441 bits (1134), Expect = 1.770e-153
Identity = 217/291 (74.57%), Postives = 255/291 (87.63%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPI--GFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDS--GGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            +AH+T RKL EVKGIS+QKAAK+K+  YKLVP+   F TA Q L  R D++ L+TGS ELD +L GGIETGS+TE+FGEFRTGKTQLCHTLCV CQLP+    GG EGKAMYIDTEG+FRP+ +  +AERFGLN D+VL+N+A ARAHNSEQQM+LLK ASAMMAEDR+ALL++DSATAL+RTDYCGRGELSERQMQLAQFLRQL RMA+EFG+A+V+TNQVVA+P GMSFAKDSTKPIGGNIIAHASTTRLRLRKARG+NRIC ++DSP+L E+ECQFSIG  G+++ KD
Sbjct:   54 VAHATSRKLCEVKGISEQKAAKIKDIAYKLVPMMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQFLRQLQRMADEFGIAIVITNQVVADPGGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGENRICSIYDSPSLPETECQFSIGEKGIDNAKD 344
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A7S2FUQ7_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUQ7_9STRA)

HSP 1 Score: 435 bits (1118), Expect = 6.590e-151
Identity = 209/287 (72.82%), Postives = 253/287 (88.15%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            IAH+++RKL EVKGIS+ KA KL++   KLVP GF TA+Q L +R+++I ++TGS  LD+LL+GGIETGSLTE+FGEFRTGKTQLCHTLCV CQLPLD GGGEGKAMYIDTEG FRP RL AIAER+G++ + VL+NV +ARAHNSEQQM+LLK A+A+M+EDR+ LL++DSATAL+RTDY GRGELSERQ QL QFLRQL R+A EFG+AVVL+NQVVANPDGMSFAKD++KPIGGNIIAHAS TRL+LRK+RG+NRICQV+DSP++ ESEC F++G  G+ED KD
Sbjct:   66 IAHASLRKLQEVKGISEGKAQKLRDIAMKLVPCGFQTAAQELQRREEIIMISTGSSALDELLQGGIETGSLTEIFGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDTEGCFRPNRLVAIAERYGVSPEGVLDNVVFARAHNSEQQMELLKQAAALMSEDRFVLLIVDSATALFRTDYVGRGELSERQAQLGQFLRQLQRLASEFGLAVVLSNQVVANPDGMSFAKDASKPIGGNIIAHASHTRLKLRKSRGENRICQVYDSPSIPESECTFALGNTGIEDAKD 352
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: B7G0B3_PHATC (DNA repair protein RAD51 homolog n=5 Tax=Bacillariophyta TaxID=2836 RepID=B7G0B3_PHATC)

HSP 1 Score: 434 bits (1115), Expect = 1.700e-150
Identity = 216/287 (75.26%), Postives = 248/287 (86.41%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD 861
            IAH+T+RKL +VKGIS+ K  KLKE    +VP+ F TA+  L  R+ L+TLTTGS ELDKLLEGG+ETGS+TEVFGEFRTGKTQLCHTLCV CQ+ +  GG EGKA+YIDTEGTFRP RL AIAERFGL+    LENVAYARAHNSE Q +LLK+A+A+M++DRYALLV+DSATAL+RTDY GRGELSERQMQ+AQFLRQLTR+AEEFGVAV +TNQVVANPDGMSFAKDSTKPIGGNI+AHASTTRLRLRK RGDNRIC VFDSPTL E++ QF++G  GV D +D
Sbjct:   64 IAHATIRKLSDVKGISEAKVLKLKEITKSMVPMDFKTAADALEDRKALVTLTTGSIELDKLLEGGVETGSITEVFGEFRTGKTQLCHTLCVTCQMAVTEGGAEGKAIYIDTEGTFRPNRLQAIAERFGLDPTVALENVAYARAHNSEHQAELLKLAAAIMSQDRYALLVVDSATALFRTDYTGRGELSERQMQMAQFLRQLTRLAEEFGVAVFITNQVVANPDGMSFAKDSTKPIGGNIMAHASTTRLRLRKGRGDNRICTVFDSPTLPEADAQFAVGAQGVCDAQD 350
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BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Match: A0A7S2EBM1_TRICV (DNA repair protein RAD51 homolog n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBM1_TRICV)

HSP 1 Score: 432 bits (1111), Expect = 6.200e-150
Identity = 217/284 (76.41%), Postives = 246/284 (86.62%), Query Frame = 1 
Query:    1 IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKARGDNRICQVFDSPTLAESECQFSIGPVGVED 852
            IAH+T RKL EVKGIS+ K  KLK+ V  +VP+ F TA+  L  R+ L+TLTTGS ELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTL V CQ+ +  GG EGKA+YIDTEGTFRP+RL AIAERFGL+    LENVAYARAHNSE QM+LLKMA+A+M++DRYAL+V+DSATALYRTDY GRGELSERQM +AQFLR+LT +AEEFGVAV LTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRK RG+NRIC VFDSPTL E++ QF++GP G+ D
Sbjct:   61 IAHATARKLSEVKGISEAKVTKLKDIVKAMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLAVTCQMSVTEGGAEGKAIYIDTEGTFRPERLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMSQDRYALIVVDSATALYRTDYTGRGELSERQMHMAQFLRRLTCLAEEFGVAVFLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRLRKGRGENRICTVFDSPTLPEADAQFAVGPKGICD 344
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7142.14803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q1_ECTSI1.250e-19997.91DNA repair protein RAD51 homolog n=2 Tax=Ectocarpu... [more]
A0A836CHV0_9STRA4.380e-17281.31DNA repair and recombination protein Rad51A n=1 Ta... [more]
A0A7S1UHL6_9STRA3.260e-16881.18DNA repair protein RAD51 homolog n=1 Tax=Phaeomona... [more]
W7TKJ9_9STRA1.080e-16681.88DNA repair protein RAD51 homolog n=2 Tax=Monodopsi... [more]
A0A6S8RTG3_9STRA2.000e-15575.96DNA repair protein RAD51 homolog n=1 Tax=Pelagomon... [more]
A0A1Z5KQ22_FISSO1.200e-15377.00DNA repair protein RAD51 homolog n=2 Tax=Fistulife... [more]
A0A7S3XMC0_HETAK1.770e-15374.57DNA repair protein RAD51 homolog n=1 Tax=Heterosig... [more]
A0A7S2FUQ7_9STRA6.590e-15172.82DNA repair protein RAD51 homolog n=1 Tax=Dictyocha... [more]
B7G0B3_PHATC1.700e-15075.26DNA repair protein RAD51 homolog n=5 Tax=Bacillari... [more]
A0A7S2EBM1_TRICV6.200e-15076.41DNA repair protein RAD51 homolog n=1 Tax=Trieres c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7142contigH-elongata_contig7142:3637..5280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score560.1
Seed ortholog evalue6.1e-157
Seed eggNOG ortholog2880.D7G4Q1
Preferred nameRAD51
KEGG koko:K04482,ko:K14303
KEGG TC1.I.1
KEGG Pathwayko03013,ko03440,ko03460,ko05200,ko05212,map03013,map03440,map03460,map05200,map05212
KEGG ModuleM00427
GOsGO:0000003,GO:0000018,GO:0000150,GO:0000166,GO:0000217,GO:0000228,GO:0000278,GO:0000280,GO:0000400,GO:0000709,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000775,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0001709,GO:0001932,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006312,GO:0006323,GO:0006325,GO:0006342,GO:0006355,GO:0006403,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007294,GO:0007389,GO:0007530,GO:0007531,GO:0007533,GO:0008022,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008298,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009792,GO:0009798,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009948,GO:0009949,GO:0009950,GO:0009951,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010032,GO:0010033,GO:0010035,GO:0010212,GO:0010243,GO:0010332,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010629,GO:0010833,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0014074,GO:0016043,GO:0016458,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017151,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022413,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030261,GO:0030491,GO:0030554,GO:0030702,GO:0030706,GO:0030716,GO:0030717,GO:0031000,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033170,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0035690,GO:0035825,GO:0035861,GO:0036094,GO:0036270,GO:0036297,GO:0040029,GO:0042148,GO:0042221,GO:0042325,GO:0042493,GO:0042592,GO:0042623,GO:0042771,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043073,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0044877,GO:0045003,GO:0045005,GO:0045165,GO:0045786,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051105,GO:0051106,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060548,GO:0061806,GO:0061982,GO:0061988,GO:0065001,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0070192,GO:0070316,GO:0070317,GO:0070727,GO:0070887,GO:0071103,GO:0071214,GO:0071241,GO:0071310,GO:0071312,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0072331,GO:0072332,GO:0072710,GO:0072711,GO:0072757,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090329,GO:0090734,GO:0090735,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097327,GO:0097329,GO:0097367,GO:0098687,GO:0099086,GO:0104004,GO:0110026,GO:0110027,GO:0140013,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901563,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902298,GO:1902679,GO:1902969,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1905334,GO:1990414,GO:1990426,GO:1990505,GO:1990918,GO:2000104,GO:2000112,GO:2000113,GO:2000779,GO:2001020,GO:2001141
EggNOG free text desc.recombinase activity
EggNOG OGsCOG0468@1,KOG1433@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko03400,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA repair and recombination protein Rad51A
Ec32 orthologEc-20_000810.1
Exons5
Model size864
Cds size864
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7142.14803.1prot_H-elongata_contig7142.14803.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7142 3637..5280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931114.4875033-CDS-H-elongata_contig7142:3636..37601622931114.4875033-CDS-H-elongata_contig7142:3636..3760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 3637..3760 -
1691679704.072192-CDS-H-elongata_contig7142:3636..37601691679704.072192-CDS-H-elongata_contig7142:3636..3760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 3637..3760 -
1622931114.5016513-CDS-H-elongata_contig7142:3951..41041622931114.5016513-CDS-H-elongata_contig7142:3951..4104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 3952..4104 -
1691679704.082425-CDS-H-elongata_contig7142:3951..41041691679704.082425-CDS-H-elongata_contig7142:3951..4104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 3952..4104 -
1622931114.522735-CDS-H-elongata_contig7142:4351..44471622931114.522735-CDS-H-elongata_contig7142:4351..4447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4352..4447 -
1691679704.09005-CDS-H-elongata_contig7142:4351..44471691679704.09005-CDS-H-elongata_contig7142:4351..4447Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4352..4447 -
1622931114.5399606-CDS-H-elongata_contig7142:4593..46931622931114.5399606-CDS-H-elongata_contig7142:4593..4693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4594..4693 -
1691679704.0977538-CDS-H-elongata_contig7142:4593..46931691679704.0977538-CDS-H-elongata_contig7142:4593..4693Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4594..4693 -
1622931114.553402-CDS-H-elongata_contig7142:4889..52801622931114.553402-CDS-H-elongata_contig7142:4889..5280Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4890..5280 -
1691679704.1056085-CDS-H-elongata_contig7142:4889..52801691679704.1056085-CDS-H-elongata_contig7142:4889..5280Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7142 4890..5280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7142.14803.1

>prot_H-elongata_contig7142.14803.1 ID=prot_H-elongata_contig7142.14803.1|Name=mRNA_H-elongata_contig7142.14803.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
IAHSTVRKLVEVKGISDQKAAKLKETVYKLVPIGFTTASQHLLQRQDLIT
LTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDSG
GGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQM
DLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQFLRQ
LTRMAEEFGVAVVLTNQVVANPDGMSFAKDSTKPIGGNIIAHASTTRLRL
RKARGDNRICQVFDSPTLAESECQFSIGPVGVEDPKD*
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mRNA from alignment at H-elongata_contig7142:3637..5280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7142.14803.1 ID=mRNA_H-elongata_contig7142.14803.1|Name=mRNA_H-elongata_contig7142.14803.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1644bp|location=Sequence derived from alignment at H-elongata_contig7142:3637..5280- (Himanthalia elongata Himel1 dioecious)
ATCGCTCACAGCACTGTTCGTAAGCTGGTGGAGGTGAAAGGCATTAGCGA
CCAGAAGGCGGCAAAGCTGAAGGAGACGGTGTACAAACTTGTTCCGATTG
GCTTTACGACAGCATCCCAGCACTTGCTGCAACGTCAAGATCTCATCACC
CTCACCACGGGTAGCAAGGAATTGGACAAATTGCTAGAGGGTGGAATAGA
GACTGGTTCTTTGACGGAGGTTTTTGGGGAGTTCCGCACTGGCAAGACAC
AATTGTGCCACACTCTCTGCGTGGCGTGTCAACTTCCCCTCGACTCGGGT
GGAGGCGAAGGCAAAGCGATGTACATCGACACGGAGGGAACCTTCAGACC
CCAGCGACTAACGGCGATTGCTGAGCGATTCGGTTTAAACGGTGGGCTTA
TCACACGCGTGCGGAACTCTTATCAGGAGCTTCCATATAAAATATATACT
AGTATCTTATTATTTCTCCCCGATAGCATTAACTTTTTTGACCTTCTTGT
GGCGAACTATTAATAGAGGAGTGTAGACAGGAATGCTATGTGCTGAAGCT
GGACAGTGTTTTGTACGTGTGTGGCTGGCTATGGCAGGCGATGATGTGCT
GGAAAATGTGGCGTATGCAAGAGCACACAACTCGGAGCAGCAAATGGATT
TGTTGAAGATGGCTTCGGCAATGATGGCCGAGGACAGGTATGGCAACACA
GTACCAGGTAGCTTTTACTACGACCGATGTTTAAAGCTTTAAAAGTGTTG
ATGACCGATGTCACCAAACCACTTGCCGCAAGCCCTCGCAATTCCCTTCA
AACGTCTGGCTTGAATATTCTCCAACATTGCAGGTACGCTCTCCTTGTAA
TCGACAGCGCCACGGCACTGTACCGAACGGACTATTGCGGCCGAGGGGAG
CTCTCGGAAAGACAAATGCAATTGGCGCAGTGAGTTAATTATTACGCTTC
GAGGGGAGGACTGTCGGATACCGGTACAGTATTAAGATGACACTTCTGTA
TTCATATATATGACTTCAAGCCCCCTCCCCTCCCCAAACATGCAGCTCGA
TAAAATACGACGCTGCCTCTGATCGTCACAAGATGCGCATCCTTTTACAT
TCATCGCGTTGAAAAACTTTTTAGAACATAGCTCTAGCCATAAAAAATAT
TTTCTGATGCGCGTGAAATACCCCAGATTCTTGCGACAGCTCACTAGGAT
GGCCGAGGAGTTTGGAGTCGCGGTCGTGCTTACCAATCAAGTTGTCGCGA
ATCCAGACGGAATGAGCTTCGCTAAGGACAGCACCAAGCCTATCGGGGGA
AACATTATCGCTCACGCATCGACGACAAGGTGATATGACTAACATATAAC
GGTTCGCTGTGCTACAGGTGTGTTTGTGACATGACAAATATGTCGAATAT
GCTTTCGCGCACTATTTGTCGAAATGGCGGTGCGACATGGAAACATGGGA
AATATTTAAACCACCTCCGGCTTATTCTCATTATCATTTTTTTTTTCATC
GGCCATTGAATCTTGGACAGGCTGCGACTACGAAAGGCCCGCGGAGACAA
CCGAATTTGTCAGGTCTTCGACTCTCCTACGCTAGCTGAGAGCGAGTGCC
AGTTCTCCATCGGTCCAGTCGGTGTTGAAGATCCCAAAGACTAA
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Coding sequence (CDS) from alignment at H-elongata_contig7142:3637..5280-

>mRNA_H-elongata_contig7142.14803.1 ID=mRNA_H-elongata_contig7142.14803.1|Name=mRNA_H-elongata_contig7142.14803.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1728bp|location=Sequence derived from alignment at H-elongata_contig7142:3637..5280- (Himanthalia elongata Himel1 dioecious)
ATCGCTCACAGCACTGTTCGTAAGCTGGTGGAGGTGAAAGGCATTAGCGA
CCAGAAGGCGGCAAAGCTGAAGGAGACGGTGTACAAACTTGTTCCGATTG
GCTTTACGACAGCATCCCAGCACTTGCTGCAACGTCAAGATCTCATCACC
CTCACCACGGGTAGCAAGGAATTGGACAAATTGCTAGAGGGTGGAATAGA
GACTGGTTCTTTGACGGAGGTTTTTGGGGAGTTCCGCACTGGCAAGACAC
AATTGTGCCACACTCTCTGCGTGGCGTGTCAACTTCCCCTCGACTCGGGT
GGAGGCGAAGGCAAAGCGATGTACATCGACACGGAGGGAACCTTCAGACC
CCAGCGACTAACGGCGATTGCTGAGCGATTCGGTTTAAACGATCGCTCAC
AGCACTGTTCGTAAGCTGGTGGAGGTGAAAGGCATTAGCGACCAGAAGGC
GGCAAAGCTGAAGGAGACGGTGTACAAACTTGTTCCGATTGGCTTTACGA
CAGCATCCCAGCACTTGCTGCAACGTCAAGATCTCATCACCCTCACCACG
GGTAGCAAGGAATTGGACAAATTGCTAGAGGGTGGAATAGAGACTGGTTC
TTTGACGGAGGTTTTTGGGGAGTTCCGCACTGGCAAGACACAATTGTGCC
ACACTCTCTGCGTGGCGTGTCAACTTCCCCTCGACTCGGGTGGAGGCGAA
GGCAAAGCGATGTACATCGACACGGAGGGAACCTTCAGACCCCAGCGACT
AACGGCGATTGCTGAGCGATTCGGTTTAAACGGCGATGATGTGCTGGAAA
ATGTGGCGTATGCAAGAGCACACAACTCGGAGCAGCAAATGGATTTGTTG
AAGATGGCTTCGGCAATGATGGCCGAGGACAGGCGATGATGTGCTGGAAA
ATGTGGCGTATGCAAGAGCACACAACTCGGAGCAGCAAATGGATTTGTTG
AAGATGGCTTCGGCAATGATGGCCGAGGACAGGTACGCTCTCCTTGTAAT
CGACAGCGCCACGGCACTGTACCGAACGGACTATTGCGGCCGAGGGGAGC
TCTCGGAAAGACAAATGCAATTGGCGCAGTACGCTCTCCTTGTAATCGAC
AGCGCCACGGCACTGTACCGAACGGACTATTGCGGCCGAGGGGAGCTCTC
GGAAAGACAAATGCAATTGGCGCAATTCTTGCGACAGCTCACTAGGATGG
CCGAGGAGTTTGGAGTCGCGGTCGTGCTTACCAATCAAGTTGTCGCGAAT
CCAGACGGAATGAGCTTCGCTAAGGACAGCACCAAGCCTATCGGGGGAAA
CATTATCGCTCACGCATCGACGACAAGATTCTTGCGACAGCTCACTAGGA
TGGCCGAGGAGTTTGGAGTCGCGGTCGTGCTTACCAATCAAGTTGTCGCG
AATCCAGACGGAATGAGCTTCGCTAAGGACAGCACCAAGCCTATCGGGGG
AAACATTATCGCTCACGCATCGACGACAAGGCTGCGACTACGAAAGGCCC
GCGGAGACAACCGAATTTGTCAGGTCTTCGACTCTCCTACGCTAGCTGAG
AGCGAGTGCCAGTTCTCCATCGGTCCAGTCGGTGTTGAAGATCCCAAAGA
CTAAGCTGCGACTACGAAAGGCCCGCGGAGACAACCGAATTTGTCAGGTC
TTCGACTCTCCTACGCTAGCTGAGAGCGAGTGCCAGTTCTCCATCGGTCC
AGTCGGTGTTGAAGATCCCAAAGACTAA
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