mRNA_H-elongata_contig70998.14763.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: D7FXS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS7_ECTSI) HSP 1 Score: 356 bits (914), Expect = 1.060e-109 Identity = 178/257 (69.26%), Postives = 215/257 (83.66%), Query Frame = 1
Query: 1 QRYEDLDSTCEDGSFFLAYFTSSSNNQSGMLDYRRLPDVYSADGTSIPRAEFEQENDAS-LCDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHVGPLV 768
QR + +DS+C DGSF+LA+ ++++ S LDY LP ++SADGT++ RA F NDA LCDDPC P SGG TC+ALSCYE+SW + + CV+YPQST++GCFCLDAVVTS +E+GL+ GA+ V REQG +CAPF+ DYAKAN + +LAV+SVVIVNTLLT+VMGKLAKFERHVSLSD+TST TAKLA+ QFLNTAL+VIIVNAGYTGGGLGFLQD+GVL G+Y D ER+WYATVGVAVAMTML+NVVVPH LV
Sbjct: 894 QRDDSMDSSCADGSFYLAFAANATDPDSSQLDYDNLPPIFSADGTNVSRASFVAANDADQLCDDPCQPASGGSTCRALSCYEDSWEVD-YGCVSYPQSTMIGCFCLDAVVTSFQEHGLVDGAKVVAREQGEVCAPFLRDYAKANAIKILAVMSVVIVNTLLTSVMGKLAKFERHVSLSDFTSTVTAKLALAQFLNTALIVIIVNAGYTGGGLGFLQDLGVLAGEYNDFERSWYATVGVAVAMTMLINVVVPHATTLV 1149
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A7S3UMZ3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMZ3_HETAK) HSP 1 Score: 171 bits (432), Expect = 5.070e-45 Identity = 99/256 (38.67%), Postives = 144/256 (56.25%), Query Frame = 1
Query: 16 LDSTCEDGSFFLAYFTSSSNNQSGMLDYRRLPDVYSADGTSIPRAEFEQENDASLCDDPCSPTSGGITCQALSCYEESWTSE---GFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTG-GGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHVGPLVE 771
LD +C DG F+L Y NN + LPD+ G A F + N LCD C +S +C LSC E W+ + C TY ST +GC+CL + S+ G++AG R V + +C F +Y A ++ +++ + VV VNTLL ++ LAKFERH S+S S T K+A QFLNTA++ +IVN+ + +G++ +G+ G Y D R WY +VGVA+ +TML+NVVVPH+ PL++
Sbjct: 189 LDGSC-DGGFYLTY-----NN----VTVADLPDLEVPGGNGT--AFFPRANATGLCDGGCYSSSSSTSCVYLSCAVEGWSESEYGAYECSTYQASTTVGCYCLQDLTDSISSMGVLAGVRHVYTDSWEVCGTFAGNYLLAVVLQIVSAVVVVFVNTLLKTILVGLAKFERHASVSAEASAVTIKIAFAQFLNTAIITLIVNSNISSISSVGWVSQVGLFSGSYDDFTREWYNSVGVALILTMLMNVVVPHIAPLMK 432
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: G5A977_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A977_PHYSP) HSP 1 Score: 134 bits (338), Expect = 3.790e-32 Identity = 80/198 (40.40%), Postives = 110/198 (55.56%), Query Frame = 1
Query: 169 DASLCDDPCSPTSGGITCQALSC--YEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHV 756
D + C +PC + TC L C Y+E S+G C Y S +L C+C A+ TS+K NG + G + + C ++ DY N LLA VVIVN LL N++ A FERH S S T ++ + QFLNTAL+VI+VNA + G+ +++ LGG Y D +R WY TVG+ +A TMLLN +P V
Sbjct: 498 DPTRCTEPCISEASTGTCNTLPCFYYDELVQSDGMACEAYEASHVLYCYCSTALTTSIKNNGFVDGPKMLWNNLP--CRGYIKDYLIKNSFILLAAAIVVIVNFLLDNILRAFAVFERHTSESTKTIRVAVRMFVAQFLNTALIVIVVNASFGLSGVPVAKEL--LGGKYKDFQRGWYPTVGMGIATTMLLNAFLPQV 691
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A7S1G7Q3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7Q3_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.480e-31 Identity = 85/263 (32.32%), Postives = 133/263 (50.57%), Query Frame = 1
Query: 7 YEDLDSTCEDGSFFLAYFTSSSNNQSGMLDYRRLPDVYSADGTSIPRAEFEQENDASLCDDPCSPTSGGITCQALSCYEES---WTSEGFNCVTYPQS----TILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQD-IGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHVGPLVE 771
Y D TC DGSFF+ Y +++ N+ + S P +E +D C PC+P TC+ L+C E W +G C T ++ T +GC+C + L++ +I+GA+ ++ E+ +C F YA + L A +V++VN LL +G L +FERH S+S + KL + QFLNTA++ +IV A LQ + + G + D + WY+ VG A+A+T++ N VP V PLV+
Sbjct: 522 YRDRTKTCPDGSFFVWYRGTAAENK--------------LNNESRPENWWEFTDDP--CGSPCTPPDTTRTCEKLACKPEKGKPWREQGVKCDTSARTFLAHTRVGCYCAQVLKEKLEKTDVISGAQELINEELDLCGDFAEAYAAGQGLTLAAAAAVIVVNVLLKQFLGALVRFERHSSVSSQARNLSIKLFVAQFLNTAILTLIVYARLPNNLEFPLQTTVALFDGQFDDFDSRWYSAVGAAIAVTVIFNAFVPTVTPLVQ 768
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A8K1FF60_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF60_PYTOL) HSP 1 Score: 131 bits (330), Expect = 4.550e-31 Identity = 77/192 (40.10%), Postives = 104/192 (54.17%), Query Frame = 1
Query: 181 CDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHV 756
C DPC + TC +++C+++ EG C TYP++ IL CFC DA+ S+ + G G + + C F+ DY N LA VVIVN LL ++ A FE H S S S K+ QFLNTA++V+IVNA GL L+D+ G Y D ER WY TVG+ + MTML+N VP +
Sbjct: 674 CVDPCISETSTRTCHSMACFDQDIVDEGETCETYPEANILYCFCKDALTESIDQKGFYEGPKDLWSRY-VPCRNFIRDYLIRNAFLYLAAGIVVIVNMLLKAILRAFATFEAHSSESAKASAIAIKMFGAQFLNTAIIVLIVNAAMNLNGLPLLKDL--FKGKYKDFEREWYPTVGMGITMTMLINAFVPQI 862
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A2D4BIK5_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIK5_PYTIN) HSP 1 Score: 129 bits (325), Expect = 2.060e-30 Identity = 75/192 (39.06%), Postives = 104/192 (54.17%), Query Frame = 1
Query: 181 CDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHV 756
C D C TC + C+++ C TYP++ IL CFC DA+ S+ + G G R + E C F+ DY N++ +A VVIVN LL +++ A FERH S S S K+ QFLNTA++V++VN+ GL LQD+ G Y+D ER WY +VG+ + TML+N VVP V
Sbjct: 516 CVDTCISEMSSRTCSTMPCFDQDLKDANEKCETYPETNILFCFCKDALTDSIAKYGFFDGPRQLW-ETYLPCQTFIKDYVTRNVLMYVAAAIVVIVNMLLKSILRAFATFERHSSESAKASALAVKMFAAQFLNTAIIVLVVNSALNLKGLPLLQDL--FKGKYSDFERDWYPSVGMGITTTMLINSVVPQV 704
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A8K1FHR9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHR9_PYTOL) HSP 1 Score: 128 bits (322), Expect = 5.650e-30 Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 1
Query: 136 SIPRAEFEQENDASLCDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPHV 756
S P + N + C DPC +C + C+++ G C TY S +L C+C + S+ E+G++ GA+ VV + C F+ DY K N ++A VVIVN +L ++ +A FERH S S + K+ + QFLNTA++V++VNA G+ + D+ L G Y D ER WY +VG+ + TML+NV VP +
Sbjct: 1793 SNPAVPKDPNNPPTRCTDPCVSERDDESCSTMPCFDQDLVDAGGECETYQASHMLYCYCTQQLTESIDEHGIVNGAK-VVWNKIIPCRGFIKDYLKKNGFIVIAAAVVVIVNFILNAILRAMADFERHSSESGKATAIALKMFLAQFLNTAIIVLLVNASLGVEGVPVIGDL--LKGKYRDFERDWYPSVGMGITTTMLINVFVPQI 1996
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: A0A5D6XTX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX8_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.820e-29 Identity = 77/191 (40.31%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 181 CDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPH 753
C DPC S TC L C+++ G C TY +S IL CFC DA+ SL E G+ G R + C F+ADY N ++A VV+VN LL ++ A FERH S S S K+ QFLNTA++V++VNA + +D+ G Y D ER WY TVG+ + MTML+N VP
Sbjct: 768 CVDPCISESSSATCNTLPCFDQDQLDAGDVCETYLESHILYCFCTDALSGSLAEFGVFDGPRQLWAGYEP-CRGFIADYLTKNAFIVVAAAIVVLVNLLLKAILRAFATFERHSSESAKASAIAVKMFSAQFLNTAIIVLVVNAAMNVSRVPLARDL--FKGKYKDFERDWYPTVGMGITMTMLINAFVPQ 955
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: K3X9A9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9A9_GLOUD) HSP 1 Score: 126 bits (316), Expect = 3.180e-29 Identity = 76/191 (39.79%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 181 CDDPCSPTSGGITCQALSCYEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPH 753
C DPC S TC L C+ + EG C TY S IL C C DA+ TS+ + G I G + ++ E C F+ DY N ++A VVIVN LL ++ A FERH S S S K+ QFLNTA++V++VNA + +++ G Y D ER WY TVG+ + MTML+N VP
Sbjct: 596 CVDPCVSDSSATTCSTLPCFNQDLVDEGDVCETYLASHILYCLCTDALTTSMDDFGFIDGPK-MLWETYTPCRGFITDYLTKNAFIVVAAGIVVIVNLLLKAILRAFANFERHSSESAKASAIAIKMFSAQFLNTAIIVLVVNATLGLNKIPLAKEL--FNGKYRDFEREWYPTVGMGITMTMLINAFVPQ 783
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Match: H3GEY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEY2_PHYRM) HSP 1 Score: 125 bits (314), Expect = 5.960e-29 Identity = 80/197 (40.61%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 169 DASLCDDPCSPTSGGITCQALSC--YEESWTSEGFNCVTYPQSTILGCFCLDAVVTSLKENGLIAGARAVVREQGAICAPFVADYAKANLMNLLAVLSVVIVNTLLTNVMGKLAKFERHVSLSDYTSTFTAKLAIGQFLNTALVVIIVNAGYTGGGLGFLQDIGVLGGDYTDIERAWYATVGVAVAMTMLLNVVVPH 753
D C DPC + C L C Y E S+G +C Y S +L CFC A+ +S+KE G + G + + C F +Y N LLA VVIVN LL N++ A FERH S S T ++ I QFLNTAL+VIIVNA + + +++ LGG Y D +RAWY TVG+ + TMLLN +P
Sbjct: 503 DPERCVDPCISETSTDVCNTLPCFYYNELVRSDGMSCEAYDASHVLYCFCSTALTSSIKEYGFVDGPKKLWNNIP--CRGFTKNYLVKNSFILLAAGIVVIVNFLLDNILRYFAVFERHTSESTRTIRVAVRMFIAQFLNTALIVIIVNASFGLSTVPVAKEL--LGGKYKDFQRAWYPTVGMGITTTMLLNAFLPQ 695 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70998.14763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70998.14763.1 >prot_H-elongata_contig70998.14763.1 ID=prot_H-elongata_contig70998.14763.1|Name=mRNA_H-elongata_contig70998.14763.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=258bp QRYEDLDSTCEDGSFFLAYFTSSSNNQSGMLDYRRLPDVYSADGTSIPRAback to top mRNA from alignment at H-elongata_contig70998:189..2969- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70998.14763.1 ID=mRNA_H-elongata_contig70998.14763.1|Name=mRNA_H-elongata_contig70998.14763.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2781bp|location=Sequence derived from alignment at H-elongata_contig70998:189..2969- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70998:189..2969- >mRNA_H-elongata_contig70998.14763.1 ID=mRNA_H-elongata_contig70998.14763.1|Name=mRNA_H-elongata_contig70998.14763.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at H-elongata_contig70998:189..2969- (Himanthalia elongata Himel1 dioecious)back to top |