mRNA_H-elongata_contig70563.14711.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI) HSP 1 Score: 227 bits (578), Expect = 1.870e-70 Identity = 109/139 (78.42%), Postives = 126/139 (90.65%), Query Frame = 1
Query: 1 AQVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+++CDMDRL EICDKHGLT++EDCAHALGV WRG QLG+RAKVAA+S QSDKLINSGEGG LTT+DEE+ +KAIYMSGCYE+RYGKHS+R +DELM +AM S+ NLS+RMTEMTAAVIRPLLA+LPER AQF RRY EV
Sbjct: 183 SKMCDMDRLYEICDKHGLTVVEDCAHALGVNWRGTQLGNRAKVAAYSCQSDKLINSGEGGFLTTNDEELFSKAIYMSGCYEMRYGKHSVRGSDELMEKAMLSERNLSVRMTEMTAAVIRPLLANLPERVAQFHRRYQEV 321
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA) HSP 1 Score: 194 bits (494), Expect = 6.820e-58 Identity = 90/138 (65.22%), Postives = 112/138 (81.16%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+VCDMDR++EIC+K+G+TL+EDCAH+ GVTWRG+QLG AKV A+S QSDK+INSGEGG +TT D+EI AK IY+SGCYE RYGKH++R DEL AM PNLS RM E+TAAV+RPL+ +LP+R + RRYD V
Sbjct: 185 KVCDMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFITTDDDEIAAKIIYLSGCYERRYGKHAVRPADELCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEDYNRRYDSV 322
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.070e-55 Identity = 88/138 (63.77%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+V DMDR++EIC+K+G+TL+EDCAH+ GVTWRG+QLG AKV A+S QSDK+INSGEGG +TT D+EI AK IY+SGCYE RYGKH++R D+L AM PNLS RM E+TAAV+RPL+ +LP+R + RRYD V
Sbjct: 182 KVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAV 319
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A6H5K4I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I9_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.440e-55 Identity = 91/138 (65.94%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+VCDMDR+ EIC++H LTL+EDCAHA GVTWRG QLG AKV+AFS QSDK+INSGEGG +TTSD+E+ AKAIY+SG YE RY KH +R +D L A S+PNLS+RM+E TAAV+RPLL SLP R ++ RRY+ V
Sbjct: 88 KVCDMDRVSEICERHRLTLVEDCAHAAGVTWRGRQLGYHAKVSAFSTQSDKVINSGEGGFVTTSDDEMAAKAIYLSGAYEGRYSKHLVRPSDALCEAARFSEPNLSVRMSETTAAVLRPLLKSLPSRVLEYNRRYNIV 225
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A8J2WEJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ6_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.570e-54 Identity = 88/138 (63.77%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+V DMDR++EIC+K+G+TL+EDCAH+ GVTWRG+QLG AKV A+S QSDK+INSGEGG +TT D+EI AK IY+SGCYE RYGKH++R D+L AM PNLS RM E+TAAV+RPL+ +LP+R + RRYD V
Sbjct: 118 KVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAV 255
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A7S0J159_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J159_9EUKA) HSP 1 Score: 164 bits (416), Expect = 7.790e-46 Identity = 80/138 (57.97%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+V DMDR+ +IC +HGL L+EDCAH+ GV WRG QLG +VAA+S QSDK+INSGEGG LTT+D ++AKAIY+SGCYE RY KH EL AM PNLS RM E+TAA +RPL+A+L R ++ RY V
Sbjct: 243 KVADMDRVADICQRHGLRLVEDCAHSCGVKWRGRQLGYHGEVAAYSTQSDKVINSGEGGFLTTNDGGLMAKAIYLSGCYERRYAKHGTPPPKELCEAAMMEMPNLSCRMNEVTAACVRPLIANLDARVVEYNDRYAVV 380
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI) HSP 1 Score: 162 bits (409), Expect = 3.000e-45 Identity = 77/136 (56.62%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASL-PERSAQFKRRY 408
+VCDMDR++EIC+K+GLTL+EDCAH GV W+G QLG A VA +S QSDK+INSGEGG +TT ++I A+AIY +GCYE RY KH ++ + L + M ++PNLS RMTE+TAA++RPL+ +L ER ++ RY
Sbjct: 191 KVCDMDRVVEICEKYGLTLVEDCAHGCGVMWKGRQLGYHAAVACYSTQSDKVINSGEGGFITTDVDDIAAQAIYYTGCYERRYNKHLVQPPEYLCEQYMLTKPNLSCRMTEVTAAMMRPLIRNLYSERKPRYNARY 326
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: A0A7S3NJM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM7_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.090e-42 Identity = 79/138 (57.25%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+VCDMDRL+EIC + L+EDCAH GV W QLG +A++S QSDK+INSGEGG+L T D +I A+ IYMSG YE RY KH R +D L EAM PNLS RM+E+TAAV RPLLA+LP R + RYD +
Sbjct: 167 RVCDMDRLVEICAER--ILLEDCAHGCGVKWNNRQLGYHGVLASYSTQSDKVINSGEGGLLVTDDAQIAAQLIYMSGAYERRYQKHLTRPDDILCEEAMLKYPNLSCRMSELTAAVARPLLANLPSRVITYNARYDLI 302
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO) HSP 1 Score: 154 bits (389), Expect = 6.930e-42 Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASL-PERSAQFKRRY 408
+VCDMD+++ IC+KHG+ LIEDCAH GV ++G QLG V A+S QSDK+INSGEGG +TT D++I A+ +YMSGCYE RY KH+ EL + M + PNLS RM E+TAA++RPL+A+L ER ++ R+
Sbjct: 251 KVCDMDKVVAICEKHGMKLIEDCAHGCGVRYKGRQLGYHGVVTAYSTQSDKVINSGEGGFITTDDDDIAARCLYMSGCYERRYSKHARMPPQELCEKYMLTMPNLSSRMNEVTAAMMRPLIANLYSERLPRYMERW 386
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Match: L1IIK5_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IIK5_GUITC) HSP 1 Score: 139 bits (349), Expect = 2.160e-36 Identity = 66/138 (47.83%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 4 QVCDMDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINSGEGGMLTTSDEEIVAKAIYMSGCYELRYGKHSIRANDELMLEAMRSQPNLSMRMTEMTAAVIRPLLASLPERSAQFKRRYDEV 417
+V DMD++ ++C G+ L+EDCAH+LGV WRGE G + ++ FS QS K++NSGEGG L T D+E+ AK I +G YE Y KHS+R DE+ E PN SMRM +TAA+I P +++L ER ++ RRY ++
Sbjct: 204 KVADMDKIEQVCKDRGIVLLEDCAHSLGVYWRGEHTGHKGVMSCFSSQSYKMLNSGEGGFLLTDDDELAAKMILYAGAYEKLYHKHSLRPADEIFEEIKHEIPNYSMRMHGVTAAMIYPQISTLDERIEKYNRRYLDI 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70563.14711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70563.14711.1 >prot_H-elongata_contig70563.14711.1 ID=prot_H-elongata_contig70563.14711.1|Name=mRNA_H-elongata_contig70563.14711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp MDRLLEICDKHGLTLIEDCAHALGVTWRGEQLGSRAKVAAFSMQSDKLINback to top mRNA from alignment at H-elongata_contig70563:136..2768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70563.14711.1 ID=mRNA_H-elongata_contig70563.14711.1|Name=mRNA_H-elongata_contig70563.14711.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2633bp|location=Sequence derived from alignment at H-elongata_contig70563:136..2768+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70563:136..2768+ >mRNA_H-elongata_contig70563.14711.1 ID=mRNA_H-elongata_contig70563.14711.1|Name=mRNA_H-elongata_contig70563.14711.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig70563:136..2768+ (Himanthalia elongata Himel1 dioecious)back to top |