mRNA_H-elongata_contig69562.14602.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: D8LBH9_ECTSI (Putative ankyrin protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH9_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.400e-77 Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 1
Query: 1 ELSVQHEGELKTQTALPKPS-PARAQGLGEEGNTRPAKTREDREAAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRENLHGTEA 507
ELS +HEGEL+ Q AL KPS PA AQGLGEEGNT PA+T E REAAVAAKTRGN L+ +KD ALAAY+EAI LDGSDA FRSNRSAV+MS ++EKALVDAEVCRRLKPDWPKACYRMAVARLALGR+EDAALAAWEGVQLD DN QLKSLLQ CV+KGR LHG ++
Sbjct: 238 ELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHGPKS 407
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S4D5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5D3_HETAK) HSP 1 Score: 146 bits (369), Expect = 6.950e-41 Identity = 78/138 (56.52%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 94 NTRPAKTREDREAAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGR-ENLHGTE 504
+T PAK +E A A K GN+L SKD A+A YT+AI LDGSDA F SNRSA YM ++++AL AE+ R+L+PDWPKAC+R+AVARLAL +YEDAA+AA++G++LD +N +LKSLL++CV++GR E+ G E
Sbjct: 95 STDPAKDQETATQAQAIKAEGNSLFVSKDYAGAIAKYTQAIELDGSDAAFWSNRSACYMETKQYQRALASAEMARQLRPDWPKACFRLAVARLALEQYEDAAMAAFDGLKLDEENGELKSLLRKCVRRGRAEHFRGQE 232
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A836CAJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ6_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.400e-38 Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 64 ARAQGLGEEGNTRPAKTREDREAAVAAKTRGNALVASKDPD--SALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGR 483
ARA+ + P + E + AA A KT GNA A+ P ALAAYT A+ LD ++ V+ SNRSAV+M+ G+ AL DAEV RRLKPDWPKACYRMA+AR ALG +E+AA++AWEGVQLD N +LK +LQ CV++GR
Sbjct: 102 ARAEAAALKPTRFPEASTEAKRAAEATKTEGNAAFAAAPPRLAEALAAYTRAVELDANNHVYWSNRSAVHMALGDAAAALADAEVARRLKPDWPKACYRMAIAREALGMWEEAAVSAWEGVQLDNTNAELKKVLQRCVEEGR 243
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S2G1E5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1E5_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.110e-32 Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 130 AAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRE 486
AA K GN +K A+ AYT AI LDG+DAVF SNRSA ++ E ++AL DAE CRRL+P W KACYRMA ARLAL YED+ALAA+EG++LD N+ LK ++ + V+ GRE
Sbjct: 16 AAQELKGEGNDAFKAKQYKEAVDAYTAAIKLDGTDAVFWSNRSACWLELNEPQRALADAEQCRRLRPTWAKACYRMAAARLALKLYEDSALAAFEGLKLDDKNESLKKIMNKAVELGRE 134
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S2ASN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASN0_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.990e-30 Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 133 AVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGR 483
A AK +GN KD SA AYTEAI + DA F SNRSA Y+S G++E AL DAE C +L+PDW KA YR+A ARLAL R+EDAALAA+EG++LD N LK L+ V++GR
Sbjct: 17 AAEAKGKGNEAFQKKDFPSAAEAYTEAIYMVPGDASFWSNRSACYLSMGQNELALSDAERCCKLRPDWSKAYYRVATARLALKRFEDAALAAFEGLKLDDKNTTLKKLMNTAVEQGR 133
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S2RLK0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK0_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.930e-29 Identity = 69/131 (52.67%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 94 NTRPAKTREDREAAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRE 486
NT PA + E++ A A K GNA +KD +A YT AI LDG+DAVF SNRSA ++ + +ALVDA CR L+PDW KAC+RMA ARLAL YEDAALAA+EG++++ +N LK L+ + V+ GR+
Sbjct: 394 NTEPAGSPEEKARAQALKDEGNAAFKAKDFTAASQMYTAAIKLDGADAVFWSNRSACWLELKQPRRALVDAIQCRSLRPDWAKACFRMASARLALDMYEDAALAAFEGLKMEQNNVPLKRLMNKAVELGRQ 524
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S3M9M3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9M3_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.140e-27 Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 1
Query: 232 DAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRE 486
+A + SNRSA YM E KA+ DAE+CR+LKPDW + CYR+AVARLAL +YEDAA+AA+EGV+LD N +LK L+Q VK G+E
Sbjct: 6 NATYWSNRSAAYMGLNEPLKAMKDAEICRQLKPDWTRGCYRLAVARLALKQYEDAAVAAFEGVKLDDKNTELKELMQRAVKLGQE 90
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A7S0SRZ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRZ6_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.140e-27 Identity = 56/114 (49.12%), Postives = 81/114 (71.05%), Query Frame = 1
Query: 145 KTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRE 486
K GN +++ + A+ YT+ I LD ++ V SNRSA Y+ +++ +L DAE+CRRL P WPK CYR+A AR AL YEDAA+AA+EG++LD +N++LK ++Q+ VK GRE
Sbjct: 317 KQSGNTYYSNRQYNEAIKEYTKGIELDQTNQVLWSNRSASYLQIKDYQNSLKDAEICRRLDPTWPKGCYRLAAARFALELYEDAAVAAYEGLKLDNNNKELKKIIQDAVKLGRE 430
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A0D2W7T7_GOSRA (Uncharacterized protein n=28 Tax=Gossypium TaxID=3633 RepID=A0A0D2W7T7_GOSRA) HSP 1 Score: 112 bits (280), Expect = 5.030e-26 Identity = 64/137 (46.72%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 94 NTRPAKTREDREAAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRENLHGTE 504
N P T E ++ A AK+RG+ KD A+ AYT+AI LD +DA SNRS ++ G+ E AL DA CR L+PDWPKACYR A L +Y++AA A +EGVQLD +N++L + +E V+ GR+ HGT+
Sbjct: 325 NDLPEVTPETKKKAAEAKSRGDEAFKRKDFHMAVDAYTQAIDLDPTDAALHSNRSLCWIRLGQAEHALADARACRALRPDWPKACYREGAALRLLQKYDEAANAFYEGVQLDPENKELVNAFREAVEAGRK-FHGTD 460
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Match: A0A6J1KFR8_CUCMA (hsp70-Hsp90 organizing protein 1-like n=1 Tax=Cucurbita maxima TaxID=3661 RepID=A0A6J1KFR8_CUCMA) HSP 1 Score: 108 bits (269), Expect = 1.720e-25 Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 118 EDREAAVAAKTRGNALVASKDPDSALAAYTEAIALDGSDAVFRSNRSAVYMSKGEHEKALVDAEVCRRLKPDWPKACYRMAVARLALGRYEDAALAAWEGVQLDTDNQQLKSLLQECVKKGRENLHGTE 504
E ++ A AK+RG+ +KD +A+ AYT+AI LD +D SNRS ++ G+ E+AL DA CR LKPDWPKACYR A L R+E+AA + +EGVQLD +N L + +E V+ GR+ HGT+
Sbjct: 157 EAKKKAAEAKSRGDDAFNTKDFQTAVDAYTQAIDLDPTDGTLFSNRSLCWIRLGQAEQALADARACRALKPDWPKACYREGAALRLLQRFEEAANSFYEGVQLDPNNMALVNAFREAVEAGRK-FHGTD 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69562.14602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69562.14602.1 >prot_H-elongata_contig69562.14602.1 ID=prot_H-elongata_contig69562.14602.1|Name=mRNA_H-elongata_contig69562.14602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp ELSVQHEGELKTQTALPKPSPARAQGLGEEGNTRPAKTREDREAAVAAKTback to top mRNA from alignment at H-elongata_contig69562:1498..3104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69562.14602.1 ID=mRNA_H-elongata_contig69562.14602.1|Name=mRNA_H-elongata_contig69562.14602.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1607bp|location=Sequence derived from alignment at H-elongata_contig69562:1498..3104- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69562:1498..3104- >mRNA_H-elongata_contig69562.14602.1 ID=mRNA_H-elongata_contig69562.14602.1|Name=mRNA_H-elongata_contig69562.14602.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig69562:1498..3104- (Himanthalia elongata Himel1 dioecious)back to top |