mRNA_H-elongata_contig69379.14588.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig69379.14588.1
Unique NamemRNA_H-elongata_contig69379.14588.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A6H5KNR9_9PHAE (GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNR9_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.290e-93
Identity = 156/215 (72.56%), Postives = 178/215 (82.79%), Query Frame = 1
Query:    4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
            +ALD  +  G   +Y + QEGRGIGLANKVAAY LQDGGLDTVDANR+LGFDDD RSYEAV++IL+DMGIKSIKLMTNNPFKLK LK+MGIK+LSRIPMLV PN HSL YL  KA RM H+LHQ+D+VE+ SES   G T+PVAL  PL+EVG IRGGE     +  + ++EGYAFGRDSVLAAIEAVR GKCVVVTDDE RENEGD++FAAEKA
Sbjct:  253 LALDYISEHGGCVIYMQ-QEGRGIGLANKVAAYALQDGGLDTVDANRHLGFDDDLRSYEAVEHILADMGIKSIKLMTNNPFKLKCLKSMGIKVLSRIPMLVPPNVHSLAYLRAKAHRMSHVLHQLDDVEILSESPSGGATAPVAL--PLNEVGAIRGGESTRGSEEAEPDEEGYAFGRDSVLAAIEAVRSGKCVVVTDDEGRENEGDLVFAAEKA 464          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A835ZPV4_9STRA (GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPV4_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.040e-62
Identity = 127/232 (54.74%), Postives = 156/232 (67.24%), Query Frame = 1
Query:    4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDE-VGVIRGGEKANEQQPE--------------------KDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFA 636
            ++LD     G + +Y + QEGRGIGLANK+AAY LQD GLDTVDANR+LGF+DDYRSYEAV++IL D+G+KS++LMTNNPFKLK LKAMGIK+ +RIPMLVAPN HS  YL+ K+ RM HLL   D   V  E+         A A+  D  V  +RGG  A+E   E                    + E E +AFGR++V+AAI+AV EGK VVVTDDE RENEGD+I A
Sbjct:   90 LSLDYIHRHGGIVIYMQ-QEGRGIGLANKIAAYSLQDQGLDTVDANRHLGFEDDYRSYEAVEFILRDLGVKSVQLMTNNPFKLKCLKAMGIKVQARIPMLVAPNPHSERYLQAKSRRMSHLLALDDAEAVVVEAAAXXXXXXXATAVAGDTPVTKLRGG-AASEDGSELCVXXXXXXXXXXXXXXXXGECETETWAFGRETVVAAIKAVGEGKLVVVTDDEDRENEGDLICA 319          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2UYM8_9STRA (GTP cyclohydrolase II (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYM8_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.520e-47
Identity = 103/227 (45.37%), Postives = 138/227 (60.79%), Query Frame = 1
Query:   22 THPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALP------------------LDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
            TH G + +Y + QEGRGIGLANKVAAY LQD G+DTVDANR+LGF+DD RSYEAV  IL ++GIKSI+L+TNNP+K++ L  +G++I S  P++  PN H++ YL  KASRM H   +   + + S+++  GL +   L  P                                         + + FGR +V AAI+A+R+GK VVV DDE+RENEGD+I AAE A
Sbjct:  169 THGGAI-IYMQ-QEGRGIGLANKVAAYALQDHGMDTVDANRHLGFEDDLRSYEAVPKILKNLGIKSIRLLTNNPYKVQCLSDLGVEIQSTTPIVATPNFHNIDYLRAKASRMSH---RFPPLHLPSDNVSPGLNTTTGLVPPGLAXXXXXXXXXXXPEXXXXXXXXXXXXXXXXXXXXXXASDKNWCFGRHTVEAAIDAIRQGKMVVVVDDENRENEGDLIMAAELA 390          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2RFL1_9STRA (GTP cyclohydrolase II n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFL1_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.230e-42
Identity = 103/217 (47.47%), Postives = 130/217 (59.91%), Query Frame = 1
Query:   58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRHL----LHQIDNV------------EVTSESLRDG---LTSPVALALPLDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
            QEGRGIGLANKVAAY +QD GLDTVDAN +LGF +D R Y  V  ILSD+GI SIKLMTNNP K+  L ++GI ++  IPM+VA  N  +  YL+TK  RM H     + +I+ V             V  E + +G     + V +AL +DE GV               +++GY FGR SVL A+EA+  G+ VVV DD  RENEGD I AA+ A
Sbjct:  146 QEGRGIGLANKVAAYAMQDMGLDTVDANTHLGFPEDCRMYGVVPSILSDLGIDSIKLMTNNPRKIDRLTSLGINVVDTIPMVVAEANDFNRKYLQTKKDRMHHTNFGDMLKIETVFSPEPLPIPLQHPVADEYINEGEEMAATAVVMAL-IDEAGVTA-------------KEDGYCFGRQSVLDAVEAMARGEIVVVVDDMDRENEGDFIMAADLA 348          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2XMA4_9STRA (GTP cyclohydrolase II (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMA4_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.160e-42
Identity = 101/211 (47.87%), Postives = 131/211 (62.09%), Query Frame = 1
Query:   58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRH-----LLHQIDNVEVTSESLR--DGLTSPVALALPLDEVG--------VIRGGEKANEQQPEKDEKE-GYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAA 639
            QEGRGIGLANK+AAYE+QDGG+DTV+AN +LGF +D R Y  V  IL+DMGI SI+L+TNNP KL  L+A+G+ ++S IPM+V   N ++  YLETK +RM H     LL       ++   +   +G  SP    +  + +          IR    AN+ Q      E GY FGR+SV  AI A++ G+ VVV DDESRENEGD I AA
Sbjct:  304 QEGRGIGLANKIAAYEMQDGGMDTVEANIHLGFPEDCRQYGVVPGILADMGIDSIQLITNNPRKLHRLRALGVDVVSTIPMVVKEANQYNRKYLETKVNRMNHTNFGDLLAASPTSTLSPADIAKANGSLSPQEKTVADEYINEGEEMAAVAIRTALMANDTQTGVAAAENGYCFGRESVEDAIAAIKRGELVVVVDDESRENEGDFIMAA 514          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S0F7D9_9STRA (GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7S0F7D9_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.830e-41
Identity = 107/232 (46.12%), Postives = 137/232 (59.05%), Query Frame = 1
Query:    4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRH--LLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKAN----------EQQPEKDEK------EGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
            +AL    H G   +Y + QEGRGIGLANKVAAY LQD GLDTVDAN +LGF +D R+Y A+  IL DM I SIKLMTNNP K+  +K +G+K+   + M+V + N ++  YLE K  RM H  L H  D+   + E        P+     L+E G   GG   N          E++ ++DE       +GY FGR SV  AI A R+GK VVV DD +RENEGD+I AA+
Sbjct:   94 MALKHVAHQGGAVIYMQ-QEGRGIGLANKVAAYALQDVGLDTVDANLHLGFPEDCRNYGAIPSILHDMKIGSIKLMTNNPRKISRMKELGVKVDDTVAMVVPSTNPYNHRYLEAKHDRMDHQNLEHLFDDSSSSEEV-------PLVDEAYLNESG---GGMAKNAVEMSLTAFSEEEDDEDEAGCLARDDGYCFGRKSVEDAIAATRDGKMVVVVDDMNRENEGDLIMAAD 314          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A1Z5JTA8_FISSO (GTP cyclohydrolase II n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTA8_FISSO)

HSP 1 Score: 155 bits (392), Expect = 1.140e-40
Identity = 104/234 (44.44%), Postives = 139/234 (59.40%), Query Frame = 1
Query:   31 GRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRH--LLHQIDNVE-------------VTSESLRDGL---TSPVALALPLDE---------VGVIR-GGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEK 645
            G L +Y + QEGRGIGLANKVAAY+LQD G+DTVDAN +LGF +D R Y  V  IL D+GI+SI+LMTNNP K++ LK  G+ +   +PM+V   N H+  YLE+K  RM H  L   + N E             VT E + +G     + + ++L ++E         VGV   G ++   Q     +++GY FGR+SV  AI A+  G+ VVV DD  RENEGD I AA+K
Sbjct:  191 GGLIIYLQ-QEGRGIGLANKVAAYQLQDHGMDTVDANLHLGFPEDLREYSVVPSILEDLGIQSIELMTNNPRKVELLKQAGVDVRGTVPMVVPKTNVHNQKYLESKFHRMHHANLAALVGNDESDVLSRNSNLPLYVTDEYITNGTDLTANAIQVSLLVEEEKAKAIAEAVGVDDIGDDEDGLQGVVASQEDGYCFGRESVEKAIAAIARGEMVVVVDDMDRENEGDFIMAADK 423          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A448YYD7_9STRA (GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYD7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.490e-40
Identity = 104/222 (46.85%), Postives = 131/222 (59.01%), Query Frame = 1
Query:    4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKANEQQPEKDEKE--------GYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
            +AL      G   +Y + QEGRGIGLANKVAAY LQD GLDTVDAN +LGF +D R+Y A+  I  DM I SIKLMTNNP K+  LK +G+KI   +PM+V   N ++  Y+E K  RM H     D++   SE       + V      +  G+     K + Q+   DE E        GY FGR SV+ AI AV+EGK VVV DD +RENEGD+I AA+
Sbjct:  234 MALKHIAEHGGAVIYLQ-QEGRGIGLANKVAAYALQDVGLDTVDANLHLGFPEDCRNYGAIPSIFHDMKIGSIKLMTNNPRKVNRLKELGVKIDGTVPMVVPTTNPYNHRYIEAKHERMAH--ENFDHLFSDSED-----DTIVGETYVTEGEGMAAHAVKQSLQESVDDENEEGCLAKDDGYCFGRQSVVDAIAAVKEGKMVVVVDDMNRENEGDLIMAAD 447          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: K0RI17_THAOC (GTP cyclohydrolase II n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RI17_THAOC)

HSP 1 Score: 155 bits (392), Expect = 1.550e-40
Identity = 101/218 (46.33%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRH-----LLHQIDNVEVTSES------LRDGLTSPVALALPLDEVGVIRGGEKANE-----------QQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
            QEGRGIGLANK+AAY LQD GLDTVDAN +LGF +D R+Y  V  IL DMGI SI+LMTNNP K++ L ++G+ ++  +PM+V   N ++  YLETK  RMRH     +L    N  ++++       LR+    P     PL E  +  G E A             Q       +GY FGR SV  AI AV  G+ +VV DDESRENEGD I AA+
Sbjct:  236 QEGRGIGLANKIAAYSLQDVGLDTVDANTHLGFPEDCRTYGVVPSILKDMGIDSIQLMTNNPRKVERLSSLGVDVVGTVPMVVPTANPYNKKYLETKQKRMRHANFGSMLEASPNAIMSADDSHVEFMLREANVPPEE---PLAEEYINDGEEMAANAVTVALMDDPYQSGVVASDDGYCFGRKSVEEAIAAVARGELIVVVDDESRENEGDFIMAAD 450          
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2V904_9STRA (GTP cyclohydrolase II n=2 Tax=Naviculales TaxID=38748 RepID=A0A7S2V904_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.680e-40
Identity = 99/218 (45.41%), Postives = 130/218 (59.63%), Query Frame = 1
Query:   58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNA-HSLPYLETKASRMRHL-LHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKAN----------------EQQPEKDE-----KEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
            QEGRGIGLANKVAAY LQDGG+DTVDANR+LGF+DD R Y+ +  IL DM I  I+LMTNNP K++ L ++G+ +   +PM+VA    ++  YLETK +RM H  L ++ + + T+    DG +S +    P     V    E  N                E  PE +E      +GY FGR+SV  AI+A+  G+ VVV DD  RENEGD I AA+
Sbjct:  192 QEGRGIGLANKVAAYALQDGGMDTVDANRHLGFEDDQREYDILPSILEDMNIGGIQLMTNNPRKVEMLTSVGVNVERTLPMVVAQTTPYNYKYLETKRTRMNHSNLAKLLSQDPTTMP-PDGASSHMMPRRPDSSESVSLAAEYINNGTEMSANAVQVSLMVEDYPEPEEGVKARSDGYCFGRESVEKAIQAMSRGEMVVVVDDMDRENEGDFIMAAD 408          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNR9_9PHAE1.290e-9372.56GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZPV4_9STRA3.040e-6254.74GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2UYM8_9STRA2.520e-4745.37GTP cyclohydrolase II (Fragment) n=1 Tax=Fibrocaps... [more]
A0A7S2RFL1_9STRA2.230e-4247.47GTP cyclohydrolase II n=1 Tax=Eucampia antarctica ... [more]
A0A7S2XMA4_9STRA4.160e-4247.87GTP cyclohydrolase II (Fragment) n=1 Tax=Attheya s... [more]
A0A7S0F7D9_9STRA2.830e-4146.12GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia are... [more]
A0A1Z5JTA8_FISSO1.140e-4044.44GTP cyclohydrolase II n=2 Tax=Fistulifera solaris ... [more]
A0A448YYD7_9STRA1.490e-4046.85GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia mul... [more]
K0RI17_THAOC1.550e-4046.33GTP cyclohydrolase II n=1 Tax=Thalassiosira oceani... [more]
A0A7S2V904_9STRA2.680e-4045.41GTP cyclohydrolase II n=2 Tax=Naviculales TaxID=38... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69379contigH-elongata_contig69379:569..3147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue1e-79
Seed eggNOG ortholog2880.D8LBG6
Preferred nameRIB3
KEGG rclassRC00293,RC01792,RC01815,RC02504
KEGG koko:K02858,ko:K14652
KEGG ReactionR00425,R07281
KEGG Pathwayko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110
KEGG ModuleM00125,M00840
GOsGO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006091,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009060,GO:0009110,GO:0009231,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0015980,GO:0016020,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0031012,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046483,GO:0055114,GO:0062039,GO:0062040,GO:0070013,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.3,4-dihydroxy-2-butanone-4-phosphate synthase activity
EggNOG OGsCOG0807@1,KOG1284@2759
EC3.5.4.25,4.1.99.12
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size648
Cds size648
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69379.14588.1prot_H-elongata_contig69379.14588.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig69379 569..3147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931091.7187684-CDS-H-elongata_contig69379:568..7841622931091.7187684-CDS-H-elongata_contig69379:568..784Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 569..784 +
1691679694.3387036-CDS-H-elongata_contig69379:568..7841691679694.3387036-CDS-H-elongata_contig69379:568..784Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 569..784 +
1622931091.7383862-CDS-H-elongata_contig69379:1466..16401622931091.7383862-CDS-H-elongata_contig69379:1466..1640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 1467..1640 +
1691679694.3629436-CDS-H-elongata_contig69379:1466..16401691679694.3629436-CDS-H-elongata_contig69379:1466..1640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 1467..1640 +
1622931091.7611337-CDS-H-elongata_contig69379:1990..20921622931091.7611337-CDS-H-elongata_contig69379:1990..2092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 1991..2092 +
1691679694.3805373-CDS-H-elongata_contig69379:1990..20921691679694.3805373-CDS-H-elongata_contig69379:1990..2092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 1991..2092 +
1622931091.7818143-CDS-H-elongata_contig69379:2991..31471622931091.7818143-CDS-H-elongata_contig69379:2991..3147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 2992..3147 +
1691679694.3953974-CDS-H-elongata_contig69379:2991..31471691679694.3953974-CDS-H-elongata_contig69379:2991..3147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig69379 2992..3147 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig69379.14588.1

>prot_H-elongata_contig69379.14588.1 ID=prot_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MIALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYL
GFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPM
LVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPL
DEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDD
ESRENEGDIIFAAEKA
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mRNA from alignment at H-elongata_contig69379:569..3147+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig69379.14588.1 ID=mRNA_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2579bp|location=Sequence derived from alignment at H-elongata_contig69379:569..3147+ (Himanthalia elongata Himel1 dioecious)
ATGATTGCTCTTGACGGTTCTACGCATCCTGGACGCCTTGCGGTCTATTC CGAGCTGCAGGAGGGCAGGGGTATCGGACTGGCGAACAAGGTAGCTGCTT ATGAACTGCAGGATGGTGGCTTGGATACGGTGGATGCTAATCGATACCTG GGTTTTGACGATGACTACCGATCCTACGAAGCTGTCAAGTACATCCTCAG CGATATGGGCATTAAGGTAAGGATGAACGTCGTGGCGAGTCATATGGGTC ATAGACTGGGCCTACCCTCTAGCCGTCGGTTGCTCACATAAGTTCTAGTA ATATAATACACCCAATTCACTCCCTAGACTCTGGTTTGGCGTCCCCATAT GATGAAGAATCACATATGATGATTTTGTGCTTAGATGCAGTTAAAATGTC CACATTCGAACCTGACGATAGTTGGTCCCCTGGACTACACCTCCTGTGGT GCTAAGAAGGCGTGGATGTTCGAAGGGTTCGAATGAGTTCATATGTTTTT AAATAATAATAGTTACCACAACGATTTTCGCATTGAAATGGAATATGTTT TAGGTCTTACTGTACTATTGTACTTATATATTTTTATTTAAAAAAAATGA ACTCATTCCAACCCTCCGAGCATCCACGCCTTATTAGCACCACAGGAGGT GTAGTCCAGGGGACCAACTATCGTTCTAATATTACTCTACCATGCCTTAA TAGTGCACTACTATCATTAGTGCACTACTATTAATAGTGCACTACTACAG TATACTATTAATAATGCTACTACAGTATACTATTAATGCTATTATTATAT AGAGCATTTCATTTAAAAAAAATATCTGTCCATGAAAAAAAGCTTACGCA ATTTTTCATCCCCTCCTGTGCTTCCCTTCGAACGTCGACCTTGCCTAGAG CATCAAGTTGATGACCAATAACCCGTTTAAGCTCAAGAGCCTCAAGGCAA TGGGTATAAAAATCTTGAGCCGCATCCCCATGCTGGTGGCTCCGAACGCG CACAGTTTACCTTATCTCGAGACCAAGGCAAGCCGCATGCGGCACCTCCT GCACCAAATTGATAACGTCGAGGTTTGTGCTGTTTCATTTAAATTGCATT TAAATTGGAAACAAATCATTTATTATTAGTTGTGTGTCCCCTATTTGGCA GCGCCTATCATAAAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCA CACTGAATAGGTTTTTGCTCCACGATGGCTTTACACTATACTGTTCTACT ATTTTTATTAATGTGACATCCATCTGCTGTTGCTACTGCTACTGCTGTTG CTGATGCTGATGCCGCTGCCACCTGTGATTGTAAGGAAGATAAGACAGCC CGGCAAGAGAAGGAGGATTTGAGTCACAGACACATGCACTCAAGTCGCCT CCCTCTTCACGCACGTGCACAGGTGACATCAGAATCTCTGAGGGATGGCT TAACCTCGCCGGTGGCCCTTGCCCTTCCGCTGGACGAGGTCGGAGTGATC AGAGGAGGAGAGAAGGCAAATGAGGTTAGCAGTTAGCGATTAGCGATTAG CCTCAGGATAGTACCAGATAAAATGCCTACAGGGTATTCAAGATACAGGG CTTGATGTTGTTTAACGTCTATTAATACCAAGCATTCCTCAATCAATCCA TGAGGAATCACGAAGCAATGCGTGTCTGACGCGGCAGGTAGACCCGGGAC ATAAAATAAGATGGTACAGTAGATGGTACATTATGTATTTACTCACTTAA GTAATGTATTTATTCACACAATCAATCAATCAATCGCTTATAGAAAATTG CTGAATCAATCAATCAATCAATCCACGGACGTGACGCCACCCACCGCGGA TACCTTATACCTTTTTGTTCCGCTTCTGCACCACCTTCACCCTCACCGCC ATGCTAGCGTTCCGTCCCTCTCGCTGTGGTCTGGTCTGGAAACAAATAAA ACCATGGTGGCGTTACTCTCTCTGTATTACTGTTACTGTTACTGTATCTT ACAGGTTCGAAAAGATCTATCCAAGGGGAATATATTCCGCATATTGTACT TGTATTAATACTGTAGTTATTCGAATACTGTTGACGGGATTATTGACGGG ACACAGACAAAACACTAGCAATAAATGGCGAGGTCAAAGCAAAGAAAATA CAGATAGTATTGGTGATTGTAGATAGCATTGGTGATTGTAGATATACATT GGTGATTGTAGAGGGCAGTAGTCATTGTAACGGTGATTGTTTTGTCGACA AAATTAAAAGAGGGAATCAATCCACATCTCAAGTTGTCCTGTAATATATA CATTTTAAAAGTCATTATCGGGAAAATGAAAAAATGATGAAAAACCCCGC CGCTTTCCCTACTACCCGCTAAACAAAGTTTCAGCACAGCAATGGCGGGG CAAACGGAGCGGAACCCCAGCAGCAGCAGCCGGAAAAAGACGAGAAAGAG GGCTACGCCTTCGGAAGGGATTCGGTCCTGGCGGCTATTGAGGCGGTGCG GGAGGGGAAATGTGTGGTGGTGACGGACGACGAGAGCAGAGAAAACGAGG GTGATATCATCTTCGCGGCAGAGAAGGCA
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Coding sequence (CDS) from alignment at H-elongata_contig69379:569..3147+

>mRNA_H-elongata_contig69379.14588.1 ID=mRNA_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig69379:569..3147+ (Himanthalia elongata Himel1 dioecious)
ATGATTGCTCTTGACGGTTCTACGCATCCTGGACGCCTTGCGGTCTATTC
CGAGCTGCAGGAGGGCAGGGGTATCGGACTGGCGAACAAGGTAGCTGCTT
ATGAACTGCAGGATGGTGGCTTGGATACGGTGGATGCTAATCGATACCTG
GGTTTTGACGATGACTACCGATCCTACGAAGCTGTCAAGTACATCCTCAG
CGATATGGGCATTAAGATGATTGCTCTTGACGGTTCTACGCATCCTGGAC
GCCTTGCGGTCTATTCCGAGCTGCAGGAGGGCAGGGGTATCGGACTGGCG
AACAAGGTAGCTGCTTATGAACTGCAGGATGGTGGCTTGGATACGGTGGA
TGCTAATCGATACCTGGGTTTTGACGATGACTACCGATCCTACGAAGCTG
TCAAGTACATCCTCAGCGATATGGGCATTAAGAGCATCAAGTTGATGACC
AATAACCCGTTTAAGCTCAAGAGCCTCAAGGCAATGGGTATAAAAATCTT
GAGCCGCATCCCCATGCTGGTGGCTCCGAACGCGCACAGTTTACCTTATC
TCGAGACCAAGGCAAGCCGCATGCGGCACCTCCTGCACCAAATTGATAAC
GTCGAGAGCATCAAGTTGATGACCAATAACCCGTTTAAGCTCAAGAGCCT
CAAGGCAATGGGTATAAAAATCTTGAGCCGCATCCCCATGCTGGTGGCTC
CGAACGCGCACAGTTTACCTTATCTCGAGACCAAGGCAAGCCGCATGCGG
CACCTCCTGCACCAAATTGATAACGTCGAGGTGACATCAGAATCTCTGAG
GGATGGCTTAACCTCGCCGGTGGCCCTTGCCCTTCCGCTGGACGAGGTCG
GAGTGATCAGAGGAGGAGAGAAGGCAAATGAGGTGACATCAGAATCTCTG
AGGGATGGCTTAACCTCGCCGGTGGCCCTTGCCCTTCCGCTGGACGAGGT
CGGAGTGATCAGAGGAGGAGAGAAGGCAAATGAGCAGCAGCCGGAAAAAG
ACGAGAAAGAGGGCTACGCCTTCGGAAGGGATTCGGTCCTGGCGGCTATT
GAGGCGGTGCGGGAGGGGAAATGTGTGGTGGTGACGGACGACGAGAGCAG
AGAAAACGAGGGTGATATCATCTTCGCGGCAGAGAAGGCACAGCAGCCGG
AAAAAGACGAGAAAGAGGGCTACGCCTTCGGAAGGGATTCGGTCCTGGCG
GCTATTGAGGCGGTGCGGGAGGGGAAATGTGTGGTGGTGACGGACGACGA
GAGCAGAGAAAACGAGGGTGATATCATCTTCGCGGCAGAGAAGGCA
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