mRNA_H-elongata_contig66523.14250.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: D8LK91_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK91_ECTSI) HSP 1 Score: 223 bits (567), Expect = 7.530e-70 Identity = 106/141 (75.18%), Postives = 119/141 (84.40%), Query Frame = 1
Query: 43 MAGDAMRRYLNRLVDTT-------TCNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAARKTGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQPEIGVS 444
MAG+AMR YLN LVD + TCNIAFVKTHKTASTT AT+LYRYGKRH LNVA+FHGHQSSI LPEA +G PVD+MHYHHAWDGFYEGGW+EAKAAY KIMRDP+ + LVT +REPV+HY+SYYYYFLQPE G+S
Sbjct: 1 MAGNAMREYLNLLVDESVAATKNQTCNIAFVKTHKTASTTAATLLYRYGKRHDLNVAHFHGHQSSIELPEAIEDSGKPVDLMHYHHAWDGFYEGGWAEAKAAYKKIMRDPTKVNLVTVMREPVAHYMSYYYYFLQPETGLS 141
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 148 bits (374), Expect = 6.900e-40 Identity = 78/150 (52.00%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 10 KFMLDGKVEIQMAGDAMRRYLNRLVDTTTC-------NIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAAR---KTGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQP 429
+ +L+G E + +AMR YLN LV + NIAF+KTHKTASTTLA+ILYRYG RH N+A F + ++L A++ K G VD+MHYHHAW+GFY G W +A A Y KIM + +++ VT +REPV+HYLSYYYYFL P
Sbjct: 128 EILLEGSSE-DLPVEAMRDYLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQGGTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNP 276
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 134 bits (336), Expect = 3.050e-35 Identity = 72/139 (51.80%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 61 RRYLNRLVDTTT-------CNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHG-HQSSINLPEAARK---TGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQPEIGVS 444
R YLN LV+ T CN+AF KTHKTASTT+A IL RY +RH + +A+F G H S+I L EA ++ +G VDVMHYH+ G ++G W+EAKA Y KIMR+ I +T VR SH+LSYYYY++QPE+ +S
Sbjct: 17 RAYLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLS 155
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.650e-34 Identity = 72/139 (51.80%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 61 RRYLNRLVDTTT-------CNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHG-HQSSINLPEAARK---TGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQPEIGVS 444
R YLN LV+ T CN+AF KTHKTASTT+A IL RY +RH + +A+F G H S+I L EA ++ +G VDVMHYH+ G ++G W+EAKA Y KIMR+ I +T VR SH+LSYYYY++QPE+ +S
Sbjct: 206 RAYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLS 344
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 125 bits (314), Expect = 6.030e-32 Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 46 AGD----AMRRYLNRLVDTTTC-------NIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAARKT---GNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQP 429
AGD + R YLN+LV+ TT N+AFVKTHKTASTT+A+I+YRY RH L ++ F G S +L AA +T G VD+MHYH + G Y G W+EA Y IMR+P +I VT +REP SH LSYYYYFLQP
Sbjct: 22 AGDVGPQSRRGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGG-SSVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQP 162
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 125 bits (315), Expect = 1.150e-31 Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 61 RRYLNRLVDTTTC-------NIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAARKTGNP-----VDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQPE 432
R YLN LV + NIAF+KTHKTASTT A +LYRY +RH + +A+F H S+I L EA ++T D+MHYH + G +EG W +A+ AY +I+R+ + VT VREP SH LSYYYYFLQP+
Sbjct: 81 RSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQ 216
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: D8LI80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI80_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.220e-29 Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 97 CNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAARKT---GNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDP-------------------SNIKLVTAVREPVSHYLSYYYYFLQPEI 435
CN+AFVKTHKTASTT+ +LYRYG RHG VA F +++ L AA +T GN VD+ HYH+ W+G++E W +A+ + IM +P S K VT +R+PV H+LSY+Y++ +PE+
Sbjct: 171 CNVAFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGNRVDIFHYHYVWNGYFESTWEKARGLFKDIMAEPVAPPVAAAAAAVEPRESSSSGTKFVTVLRDPVDHWLSYFYFYYEPEM 305
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: A0A6H5KIJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ9_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.390e-28 Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 97 CNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAARKT---GNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDP----------------------SNIKLVTAVREPVSHYLSYYYYFLQPEIGV 441
CN+ FVKTHKTASTT+ +LYRYG RHG VA F +++ L AA +T GN VD+ HYHH W+G++E W+ A+ + IM +P K VT +R+P+ H+LSY+Y++ +PE+ +
Sbjct: 226 CNLVFVKTHKTASTTITAVLYRYGLRHGRRVARFKVEGTAVTLEHAAEETKESGNRVDIFHYHHVWNGYFESTWARARELFKDIMAEPVAPAAXXXXXXXXXXEPRESSGGGTKFVTVLRDPIDHWLSYFYFYYEPEMKI 365
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.490e-27 Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 76 RLVDTTTCNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSI-NLPEAA---RKTGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQPEIGVS 444
R D N+ FVKTHKT STTLA + YRY RH L +A+F + +I NL +AA RK+G VDVMHYH + G Y G W +A+ + +IMR P +I VT +REP SH LS YY+++ PE +S
Sbjct: 48 RDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELS 174
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Match: A0A6H5JVG3_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.440e-26 Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 97 CNIAFVKTHKTASTTLATILYRYGKRHGLNVANFHGHQSSINLPEAA-----RKTGNPVDVMHYHHAWDGFYEGGWSEAKAAYLKIMRDPSNIKLVTAVREPVSHYLSYYYYFLQP 429
CN+AFVKTHKTASTTLA I RY KRH +A+F G S N+P A +++G VDVMHYH +G +EG W + Y +IM+D I +T VR P H+LSYYYY++QP
Sbjct: 114 CNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVS-NVPLAVAVQQVQESGQRVDVMHYH-VHEGVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQP 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig66523.14250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig66523.14250.1 >prot_H-elongata_contig66523.14250.1 ID=prot_H-elongata_contig66523.14250.1|Name=mRNA_H-elongata_contig66523.14250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp MLDGKVEIQMAGDAMRRYLNRLVDTTTCNIAFVKTHKTASTTLATILYRYback to top mRNA from alignment at H-elongata_contig66523:249..1120- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig66523.14250.1 ID=mRNA_H-elongata_contig66523.14250.1|Name=mRNA_H-elongata_contig66523.14250.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=872bp|location=Sequence derived from alignment at H-elongata_contig66523:249..1120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig66523:249..1120- >mRNA_H-elongata_contig66523.14250.1 ID=mRNA_H-elongata_contig66523.14250.1|Name=mRNA_H-elongata_contig66523.14250.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig66523:249..1120- (Himanthalia elongata Himel1 dioecious)back to top |