mRNA_H-elongata_contig65950.14181.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: D8LBM3_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM3_ECTSI) HSP 1 Score: 286 bits (733), Expect = 1.870e-91 Identity = 141/177 (79.66%), Postives = 155/177 (87.57%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLNIPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATKR 932
R QLSV +MIGG+++AAYFDLKFEL GYLL+L+NDFFTA+Y +SIKRALNL IPQTSLLYFNSLFGA +MTLVV +P ETE IVEF GWRDP FIGLY+CTSFMGSVLQYSIF CTRVNSALTTSVVGC KNLL TVVGMLG+G DY+F ALNC G+ VSMGGSFLYSWAK KR
Sbjct: 191 RTVQLSVAMMIGGSILAAYFDLKFELQGYLLVLTNDFFTASYSISIKRALNLKIPQTSLLYFNSLFGAIVMTLVVFIMPGETESIVEFPGWRDPAFIGLYICTSFMGSVLQYSIFRCTRVNSALTTSVVGCAKNLLTTVVGMLGMGDDYEFEALNCAGMVVSMGGSFLYSWAKVMKR 367
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: A0A6P8IIF5_ACTTE (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IIF5_ACTTE) HSP 1 Score: 149 bits (376), Expect = 1.200e-38 Identity = 75/169 (44.38%), Postives = 115/169 (68.05%), Query Frame = 3
Query: 411 QLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNL-NIPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSW 914
Q +V +MI G L+AA DL F+L GY+ IL ND FTAA GV +K+ L+ ++ + L+Y+N+LF L+ E +K+VE++ W+ P F+ + + FMG +L YS+ +CT+ NSALTT++VGC+KN+L T +GM+ +GGDY F N +GL++S+ GS +YS+
Sbjct: 132 QFTVFMMIAGALIAASDDLAFDLIGYIYILLNDIFTAANGVYVKKKLDSEDLGKYGLMYYNALFMIGPAVLIAYWT-GELDKVVEYDNWKSPAFLSQFCLSCFMGFILMYSVVMCTQANSALTTTIVGCLKNILVTYLGMV-IGGDYVFSLTNFIGLNISVSGSIIYSY 298
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: UPI00156175A8 (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like isoform X1 n=6 Tax=Acipenseroidei TaxID=186622 RepID=UPI00156175A8) HSP 1 Score: 149 bits (376), Expect = 2.060e-38 Identity = 81/177 (45.76%), Postives = 117/177 (66.10%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLN-IPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
R QL+V+ MI G VAA DL F+L GY+ IL ND TAA G +K+ L+ + + LLY+N+LF + TLV+ + + +K +E++GW D F+ +V + MG VL YS F+CT+ NSALTT++VGCIKN+L T +GM+ GGDY F N +GL++S+ GS +YS+ T+
Sbjct: 158 RPVQLTVIAMIFGAFVAASTDLAFDLEGYVFILLNDVLTAANGAYVKQKLDSKELGKYGLLYYNALF-MIVPTLVLAHLTGDVQKAMEYDGWADTVFVFQFVLSCVMGFVLMYSTFVCTQYNSALTTTIVGCIKNILVTYIGMV-FGGDYIFSWTNFIGLNISIAGSLVYSYITFTE 332
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: A0A5N5PZC6_PANHP (TPT domain-containing protein n=5 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5PZC6_PANHP) HSP 1 Score: 148 bits (374), Expect = 2.090e-38 Identity = 79/174 (45.40%), Postives = 115/174 (66.09%), Query Frame = 3
Query: 411 QLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLN-IPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
QL+V MI G VAA DL F+L GY+ IL ND TAA G +K+ L+ + + LLY+N+LF + TL++ + + +K +E+EGW D F+G +V + MG +L YS LCT+ NSALTT++VGC+KN+L T +GM+ GGDY F N +GL++S+ GS +YS+ T+
Sbjct: 132 QLTVFTMIFGAFVAASADLSFDLQGYVFILMNDVLTAANGAFVKQKLDSKELGKYGLLYYNALF-MILPTLLLAHVTGDMDKALEYEGWSDALFVGQFVMSCIMGFILMYSTVLCTQYNSALTTTIVGCLKNILVTYIGMV-FGGDYIFSWTNFIGLNISIAGSLVYSYITFTE 303
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: A0A3B3R1M6_9TELE (Solute carrier family 35 member D1 n=6 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R1M6_9TELE) HSP 1 Score: 149 bits (375), Expect = 2.880e-38 Identity = 84/177 (47.46%), Postives = 116/177 (65.54%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLN-IPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
R QL+V MI G VAA DL F+L GY+ IL ND TAA G +K+ L+ + + LLY+N+LF TL++ + + +K VEFEGW D F+G +V + MG +L YSI LCT+ NSALTT++VGCIKN+L T +GM+ GGDY F N +GL++S+ GS +YS+ T+
Sbjct: 158 RPVQLTVFAMILGAFVAASADLAFDLQGYVFILLNDVLTAANGAYVKQKLDSKELGRYGLLYYNALFMLA-PTLLLAYLTGDIQKAVEFEGWSDAFFVGQFVLSCVMGFILMYSIVLCTQYNSALTTTIVGCIKNILVTYIGMV-FGGDYIFTWTNFIGLNISIVGSLVYSYITFTE 332
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: A0A3B4DS94_PYGNA (UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like n=6 Tax=Characoidei TaxID=1489739 RepID=A0A3B4DS94_PYGNA) HSP 1 Score: 148 bits (373), Expect = 2.920e-38 Identity = 80/177 (45.20%), Postives = 116/177 (65.54%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLN-IPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
R QL+V MI G VAA DL F+L GY+ IL ND TAA G +K+ L+ + + LLY+N+LF + TL+V + + +K +++EGW D F+G +V + MG +L YS LCT+ NSALTT++VGC+KN+L T +GM+ GGDY F N +GL++S+ GS +YS+ T+
Sbjct: 129 RPVQLTVFTMILGAFVAASADLSFDLQGYVFILLNDVLTAANGAFVKQKLDSKELGKYGLLYYNALF-MILPTLLVAHVTGDIDKALDYEGWSDMLFVGQFVMSCIMGFILMYSTVLCTQYNSALTTTIVGCLKNILVTYIGMV-FGGDYIFSWTNFIGLNISIAGSLVYSYITFTE 303
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: E4XI10_OIKDI (TPT domain-containing protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XI10_OIKDI) HSP 1 Score: 148 bits (374), Expect = 3.080e-38 Identity = 80/168 (47.62%), Postives = 112/168 (66.67%), Query Frame = 3
Query: 414 LSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALN-LNIPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSW 914
L++ +MIGG LVAA DL F++ Y IL NDFFTA+YGV K+ LN ++ + L+Y+NSL ++ L+ S + EKI F W +P FI +V + FMG +L YSI LCT+ NS+LTT+VVGC+KNL T GM+ G DY F LN +G+++S+ GS +YS+
Sbjct: 158 LAIAIMIGGALVAALDDLAFDIAAYCFILLNDFFTASYGVFTKKKLNGKDLGKYGLMYYNSLCSLPLVLLISYS-KGDFEKIASFSEWANPMFIIQFVASCFMGFILMYSIILCTQNNSSLTTTVVGCMKNLFVTYFGMI-FGHDYKFSMLNFVGINISVAGSLVYSY 323
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: A0A7S4D794_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D794_HETAK) HSP 1 Score: 142 bits (359), Expect = 5.460e-38 Identity = 79/171 (46.20%), Postives = 118/171 (69.01%), Query Frame = 3
Query: 429 MIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLNIPQTS--LLYFNSLFGATIMTLVV-LSIPNETEKIVEFEGWRDPTFI-GLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
MIGG L+AA DL F+L+GY+LI +ND FTA YGV++K+ L+ + + LL++NSL + M L++ L++P E + + EG R P++ L + +GSVL Y+IF+CT VNSALTT+VVGC+KN+ T +GML GDY F +N +G+++S+ GS +YS+ K T+
Sbjct: 1 MIGGALIAACRDLAFDLHGYVLIFANDVFTALYGVTMKKRLSTGVKMSKMDLLFYNSLISSVGMGLLLSLALPEELARALAHEGLRRPSYATALLLLAMGLGSVLNYAIFVCTSVNSALTTAVVGCLKNVATTFLGMLL--GDYIFAWVNFIGINISLFGSLVYSYGKFTE 169
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: H3ARR6_LATCH (TPT domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3ARR6_LATCH) HSP 1 Score: 148 bits (373), Expect = 5.620e-38 Identity = 82/177 (46.33%), Postives = 117/177 (66.10%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRAL-NLNIPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
R Q++V++MI G VAA DL F+L GY+ IL ND TAA G IK+ L + + + +LY+N+LF + TL++ + +K VEFEGW D F+ L+V + MG +L YS LCT+ NSALTT++VGCIKN+L T +GM+ GGDY F N +GL++S+ GS +YS+ T+
Sbjct: 158 RGIQMTVLMMIIGAFVAASADLAFDLEGYICILLNDVLTAANGAYIKQKLESKELGKYGVLYYNALF-MILPTLIITYFTGDMQKAVEFEGWEDLIFVMLFVFSCIMGFILMYSTVLCTQYNSALTTTIVGCIKNILVTYIGMV-FGGDYIFTWTNFIGLNISIAGSLVYSYITFTE 332
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Match: G3PAR0_GASAC (Solute carrier family 35 member D1a n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PAR0_GASAC) HSP 1 Score: 145 bits (367), Expect = 7.040e-38 Identity = 80/177 (45.20%), Postives = 115/177 (64.97%), Query Frame = 3
Query: 402 RERQLSVVLMIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLN-IPQTSLLYFNSLFGATIMTLVVLSIPNETEKIVEFEGWRDPTFIGLYVCTSFMGSVLQYSIFLCTRVNSALTTSVVGCIKNLLPTVVGMLGLGGDYDFGALNCLGLSVSMGGSFLYSWAKATK 929
R QL+V MI G +AA DL F+L GY+ IL ND TAA G +K+ L+ + + LLY+N+LF I T+++ + + +K VE++GW D F+ L+V + MG VL YS LCT+ NSALTT++VGCIKN+L T +GM+ GDY F N +GL++S+ GS +YS+ T+
Sbjct: 81 RPVQLTVFTMILGAFIAASADLSFDLQGYVFILLNDVLTAANGAYVKQKLDAKELGKYGLLYYNALF-MIIPTVLLAHVTGDMQKAVEYDGWSDVFFLSLFVLSCIMGFVLMYSTVLCTQYNSALTTTIVGCIKNVLVTYIGMV-FSGDYVFSWTNFIGLNISIAGSLVYSYITLTE 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65950.14181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65950.14181.1 >prot_H-elongata_contig65950.14181.1 ID=prot_H-elongata_contig65950.14181.1|Name=mRNA_H-elongata_contig65950.14181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp MIGGTLVAAYFDLKFELYGYLLILSNDFFTAAYGVSIKRALNLNIPQTSLback to top mRNA from alignment at H-elongata_contig65950:360..3387- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65950.14181.1 ID=mRNA_H-elongata_contig65950.14181.1|Name=mRNA_H-elongata_contig65950.14181.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3028bp|location=Sequence derived from alignment at H-elongata_contig65950:360..3387- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65950:360..3387- >mRNA_H-elongata_contig65950.14181.1 ID=mRNA_H-elongata_contig65950.14181.1|Name=mRNA_H-elongata_contig65950.14181.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig65950:360..3387- (Himanthalia elongata Himel1 dioecious)back to top |