mRNA_H-elongata_contig64161.14002.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig64161.14002.1
Unique NamemRNA_H-elongata_contig64161.14002.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: D7FIE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE0_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 4.330e-87
Identity = 147/227 (64.76%), Postives = 167/227 (73.57%), Query Frame = 3
Query:  405 STVSRDEVVALPTVGVRTKRVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFSLDAIVCSPLRRARETAEIVQTSH-LGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQDNCAVNALDFDPASGVWEAVVINGRRASGRADRF 1082
            ST S    + LP V   TKR+ L RHGQTD NK  +CQGR+LNPPLN+ GR QAR LL +  LDAI+CSPLRRARETA IV+ SH L TS  +S DLNEVDFGGAEGLPQ  +A +LAPSY+AW  GR + R+   GESG  L++R  AA   LL +C EG QVL V+HSSMIKF LA LL VPLS IR LGQDNCAVNALDFD ASGV+EAV INGR   GRA+ F
Sbjct:   74 STPSGGSGLVLPAVAASTKRIFLARHGQTDLNKLGVCQGRKLNPPLNENGRRQARTLLIDVELDAILCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMASAAILAPSYLAWSHGRLDKRAGVLGESGVMLRRRGEAAAGTLLASCKEGRQVLGVSHSSMIKFTLAALLDVPLSTIRALGQDNCAVNALDFDTASGVFEAVAINGRPVRGRAESF 300          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A6H5KHI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI7_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 7.190e-86
Identity = 144/227 (63.44%), Postives = 165/227 (72.69%), Query Frame = 3
Query:  405 STVSRDEVVALPTVGVRTKRVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFSLDAIVCSPLRRARETAEIVQTSH-LGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQDNCAVNALDFDPASGVWEAVVINGRRASGRADRF 1082
            ST S    + LP V   TKR+ L RHGQTD NK  +CQGR+LNPPLN+ GR QAR LL    LD ++CSPLRRARETA IV+ SH L TS  +S DLNEVDFGGAEGLPQ V+A +LAPSY+AW  GR + R+   GESG  L++R  AA   LL +C EG QVL V+HSSMIKF LA LL VPLS IR LGQDNCAVNALD+D  SGV+EAV INGR   GRA+ F
Sbjct:   89 STSSGGSGLVLPAVAAHTKRIFLARHGQTDLNKLGVCQGRKLNPPLNEKGRSQARTLLIGVELDGVLCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMVSAAILAPSYLAWSHGRLDKRAGVLGESGVMLRRRGEAAAGTLLASCKEGRQVLGVSHSSMIKFTLAALLDVPLSTIRALGQDNCAVNALDYDTTSGVFEAVAINGRPVRGRAESF 315          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A7S4JH75_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JH75_GUITH)

HSP 1 Score: 147 bits (372), Expect = 2.030e-37
Identity = 80/198 (40.40%), Postives = 118/198 (59.60%), Query Frame = 3
Query:  429 VALPTVGVRTKRVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQL---LPNFSLDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQDNCAVNALDFD 1013
            + LP +G +TKR++L RHG+T+ N+    QGRR+NPPLN  GR QA++L   L      A+  S L RA ETA+ V+  H G    +  DL+EVDFG +EG     + + ++ +Y  W +G  E R+   GES  ++  R   A++ LL +C EG  V+AV+HSS ++F+L T LG      R + Q NC V+ +D+D
Sbjct:  113 LGLPAIGAKTKRLILCRHGETELNRLGKIQGRRMNPPLNPRGRRQAQELAAALCGVRTSAVFSSELERAIETADEVEKFHAGARRSVLADLDEVDFGSSEGKSLESSRLRISATYARWIMGDEEARATPEGESYREVATRARRALDELLGSCREGEAVVAVSHSSYLRFLLQTCLGWRYGQARMVAQGNCCVDVIDYD 310          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A5S9ID91_RHOMR (Phosphoglycerate mutase n=4 Tax=Rhodothermus marinus TaxID=29549 RepID=A0A5S9ID91_RHOMR)

HSP 1 Score: 113 bits (282), Expect = 1.340e-25
Identity = 78/197 (39.59%), Postives = 108/197 (54.82%), Query Frame = 3
Query:  474 VRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFS---LDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAA-VVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLG-VPLSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            VRHG+TD+N+  I QGR ++ PLND GR QA  L   F+   LDAI  SPLRRA ETAE V+  H         DL E+D+G  EG P A      +   Y  W+ G ++   V  GES  D+Q+R   A+E +L    EG  VL V H   ++ +LA++L    L+ +  L   N AVN L ++  +G + A+ +N
Sbjct:    9 VRHGETDYNRNSIVQGRGVDAPLNDRGRRQAEALARRFAAVPLDAIYASPLRRALETAEAVRRYHPAVPFYQLADLEEMDWGELEGKPYAPPYDAKIRAIYERWRAGDYDY-PVPGGESILDVQRRALRALETILSR-HEGETVLIVAHGRFLRILLASVLPEYGLARMEALPHTNTAVNHLVYE--NGRFRALRLN 201          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A0G4EKL9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EKL9_VITBC)

HSP 1 Score: 113 bits (282), Expect = 8.300e-25
Identity = 75/226 (33.19%), Postives = 113/226 (50.00%), Query Frame = 3
Query:  462 RVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQL---LPNFSLDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLL-----------------------HACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQ----DNCAVNALDFDPASGVWEAVVIN 1049
            R++L RHGQTD+NK ++ QGRR+N P+ND G  QA  L   L    + A+V S + RA +TA+IV + H     +   DL+EVDFG  EG   A     L  +Y +W++G  E R    GESG D+  R  AA++ L+                        A  +   V+AV H   ++ +LA   G  +  +R   +    +NC +N +D +PA+   +  +IN
Sbjct:   66 RLVLCRHGQTDYNKERLIQGRRINAPINDEGVRQATALAGVLEGMDVRAVVSSSMMRAGQTADIVHSRHRDVPRLRFKDLDEVDFGELEGRGIASGLPSLTSTYASWRLGEGEARLGSIGESGIDIATRVRAAIDDLIVVAKQPPMLASRLGIDVSAAFASQADQQPPVVVAVAHGEFLRRLLADAAGDDVG-LRLSAETAVINNCGINVVDVNPATLQTKIQLIN 290          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A1M6Q7W3_9BACT (Probable phosphoglycerate mutase n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6Q7W3_9BACT)

HSP 1 Score: 106 bits (264), Expect = 4.730e-23
Identity = 76/197 (38.58%), Postives = 108/197 (54.82%), Query Frame = 3
Query:  474 VRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFS---LDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAA-VVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLG-VPLSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            VRHG+TD+N+  I QGR ++ PLN+ G+ QA  L   F+   LDAI  SPL+RAR TAE V+  H         DL E+D+G  EG P A      +   Y  W+ G +    V  GES  D+Q+R   A++ +L A  EG  VL VTH   ++ +LA++L    L+ +  L   N AVN L  +  +G + A+ +N
Sbjct:    9 VRHGETDYNRHGIVQGRGVDAPLNEHGQRQAEALARRFAEVALDAIYTSPLQRARATAEAVRQYHPDLPFYQMADLEEMDWGDLEGKPCAPPYDAQIRRIYERWQAGDYAY-PVPGGESVLDVQRRALRALQTIL-ARHEGEAVLVVTHGRFLRILLASILPEYGLARMEALPHTNTAVNHLVCE--NGRFRALRLN 201          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A2T2V8A4_9BACT (Histidine phosphatase family protein n=1 Tax=Bacteroidetes bacterium QS_8_68_28 TaxID=1919110 RepID=A0A2T2V8A4_9BACT)

HSP 1 Score: 105 bits (261), Expect = 1.110e-22
Identity = 73/199 (36.68%), Postives = 101/199 (50.75%), Query Frame = 3
Query:  471 LVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNF---SLDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAV-AAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVP--LSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            LVRHGQT++N++ I QGRR++  LN  GR QA  L   F   SLDA+  S +RRAR+TA  V   H G SV    DL E+ +G  EG P        L      W+ GR    +   GES  D+Q+R   A+  +      G  VL V H   ++ ++A+LL     L  + ++   N  VN L +D A G   A ++N
Sbjct:    5 LVRHGQTEYNRKGIVQGRRVDSALNGTGRRQAEALAARFADASLDALYTSAMRRARQTARPVAARHPGLSVHPDEDLEEMSWGRFEGEPPTNDVRDALDDIKTDWRNGRLGRAARGGGESALDVQERALRAMRRIFAEQHAGGTVLVVAHGRFLRVLIASLLPARFGLRAMHRVEHANTGVNHLAYD-ARGACSARLLN 202          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: A0A1V4QNE9_9DELT (Uncharacterized protein n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1V4QNE9_9DELT)

HSP 1 Score: 104 bits (260), Expect = 1.360e-22
Identity = 72/199 (36.18%), Postives = 107/199 (53.77%), Query Frame = 3
Query:  462 RVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQAR---QLLPNFSLDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            R++LVRHG+T +NK KI +G  ++ PLND GRE+AR   + L    +DA   SPL RA ETAE +   H G  V     L ++++G  +G+P A         Y  W+     VR    GE+ E+++ R  AAV+ +L    + + +LA  H  + K ++A  +G+  S   ++GQD  AVN   FD    +W  V IN
Sbjct:    3 RIILVRHGETPWNKDKIFRGS-VDIPLNDTGREEARLAGEWLKGEKIDAAYSSPLSRAMETAENIARHH-GVMVQKLEGLADLNYGDWQGMPLAEVKEKYTELYRQWETMPQNVRFPN-GETLEEVRVRALAAVDTVLQRHPDQNILLA-AHRVVNKVLIAAFIGLDNSHFWRIGQDTTAVNR--FDKVGPIWNIVTIN 195          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: UPI000C9F15AF (histidine phosphatase family protein n=3 Tax=Salinibacter altiplanensis TaxID=1803181 RepID=UPI000C9F15AF)

HSP 1 Score: 105 bits (261), Expect = 1.370e-22
Identity = 77/200 (38.50%), Postives = 108/200 (54.00%), Query Frame = 3
Query:  471 LVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFS---LDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEG---LPQAVAAVVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLG-VPLSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            LVRHG+T++N+R + QG  ++  LN  GREQAR L   F+   +DA+  S LRRA +TA+I+   H   S     DL E+D+G  EG    P+  A+V    S  AW+ G ++ R+   GES  D+Q R   A+  +L A  EG   L VTH   ++ +LATLL    L  + + G  N  VN + FD   G   A  +N
Sbjct:   18 LVRHGETEYNRRGVMQGGGIDSTLNATGREQARALAHRFAPVDVDALYASTLRRAIQTADILAAEHESLSCTRLQDLREMDWGVFEGEPPSPERDASVDALKS--AWRNGDYD-RAPEEGESIRDVQGRVRRALRHIL-AQEEGGAALVVTHGRYLRVLLATLLDEYGLEHMSQFGHSNTCVNHVVFD--EGQTRAERLN 211          
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Match: UPI0003B6969E (histidine phosphatase family protein n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B6969E)

HSP 1 Score: 104 bits (260), Expect = 1.540e-22
Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  444 VGVRTKRVLLVRHGQTDFNKRKICQGRRLNPPLNDVGREQARQLLPNFS---LDAIVCSPLRRARETAEIVQTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAA-VVLAPSYMAWKVGRFEVRSVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLGVPLSWIRKLGQDNCAVNALDFDPASGVWEAVVIN 1049
            V V T  + LVRHG+T++N++ I QGR ++  LN  GR QA+ L   F+    D    SPLRR R+TA +V   H     I   DL E+ +G  EG P A      +      W+ G  ++  +  GES  D++ R   AV  +L A + G  +L VTH   ++ +LA++L   L  + ++G  N  VN L++    G ++A ++N
Sbjct:    7 VDVATTTLYLVRHGETEYNRQGIVQGRGIDADLNATGRAQAKALGERFATVDFDVAYVSPLRRTRQTARLVTARHRPLPTIYLKDLEEMAWGVYEGEPPAPDRDAAMNAIKEQWRAGTVDL-PIEGGESPRDVEARAQRAVHHMLEA-SAGRTILVVTHGRYLRVLLASVLERGLHNMHEMGHANTCVNHLEY--RDGRFQAKLLN 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64161.14002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIE0_ECTSI4.330e-8764.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHI7_9PHAE7.190e-8663.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4JH75_GUITH2.030e-3740.40Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A5S9ID91_RHOMR1.340e-2539.59Phosphoglycerate mutase n=4 Tax=Rhodothermus marin... [more]
A0A0G4EKL9_VITBC8.300e-2533.19Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A1M6Q7W3_9BACT4.730e-2338.58Probable phosphoglycerate mutase n=1 Tax=Rhodother... [more]
A0A2T2V8A4_9BACT1.110e-2236.68Histidine phosphatase family protein n=1 Tax=Bacte... [more]
A0A1V4QNE9_9DELT1.360e-2236.18Uncharacterized protein n=2 Tax=Deltaproteobacteri... [more]
UPI000C9F15AF1.370e-2238.50histidine phosphatase family protein n=3 Tax=Salin... [more]
UPI0003B6969E1.540e-2233.98histidine phosphatase family protein n=1 Tax=Salis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64161contigH-elongata_contig64161:2..3030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.6
Seed ortholog evalue1.4e-71
Seed eggNOG ortholog2880.D7FIE0
KEGG koko:K06236
KEGG Pathwayko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165
EggNOG free text desc.regulation of pentose-phosphate shunt
EggNOG OGsCOG0588@1,KOG0235@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko04516
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Ec32 orthologEc-11_001540.1
Exons4
Model size1231
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64161.14002.1prot_H-elongata_contig64161.14002.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig64161 136..2833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931027.4774616-UTR-H-elongata_contig64161:1..1351622931027.4774616-UTR-H-elongata_contig64161:1..135Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64161 2..135 -
1691679667.6900852-UTR-H-elongata_contig64161:1..1351691679667.6900852-UTR-H-elongata_contig64161:1..135Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64161 2..135 -
1622931027.565131-UTR-H-elongata_contig64161:2833..30301622931027.565131-UTR-H-elongata_contig64161:2833..3030Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64161 2834..3030 -
1691679667.7511034-UTR-H-elongata_contig64161:2833..30301691679667.7511034-UTR-H-elongata_contig64161:2833..3030Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig64161 2834..3030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931027.4929347-CDS-H-elongata_contig64161:135..3421622931027.4929347-CDS-H-elongata_contig64161:135..342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 136..342 -
1691679667.7094414-CDS-H-elongata_contig64161:135..3421691679667.7094414-CDS-H-elongata_contig64161:135..342Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 136..342 -
1622931027.5117881-CDS-H-elongata_contig64161:776..10111622931027.5117881-CDS-H-elongata_contig64161:776..1011Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 777..1011 -
1691679667.7182884-CDS-H-elongata_contig64161:776..10111691679667.7182884-CDS-H-elongata_contig64161:776..1011Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 777..1011 -
1622931027.5309513-CDS-H-elongata_contig64161:1469..16361622931027.5309513-CDS-H-elongata_contig64161:1469..1636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 1470..1636 -
1691679667.72842-CDS-H-elongata_contig64161:1469..16361691679667.72842-CDS-H-elongata_contig64161:1469..1636Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 1470..1636 -
1622931027.5494113-CDS-H-elongata_contig64161:2542..28331622931027.5494113-CDS-H-elongata_contig64161:2542..2833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 2543..2833 -
1691679667.738333-CDS-H-elongata_contig64161:2542..28331691679667.738333-CDS-H-elongata_contig64161:2542..2833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig64161 2543..2833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig64161.14002.1

>prot_H-elongata_contig64161.14002.1 ID=prot_H-elongata_contig64161.14002.1|Name=mRNA_H-elongata_contig64161.14002.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp
MGRKPLKQAKAVAKATAKVTAKAAVAAASTVVKMPPVVSAANEGDTRVTR
DSTVRQQASIMPGEMSTWRSTVSRDEVVALPTVGVRTKRVLLVRHGQTDF
NKRKICQGRRLNPPLNDVGREQARQLLPNFSLDAIVCSPLRRARETAEIV
QTSHLGTSVIMSNDLNEVDFGGAEGLPQAVAAVVLAPSYMAWKVGRFEVR
SVRAGESGEDLQQRTAAAVEVLLHACTEGSQVLAVTHSSMIKFMLATLLG
VPLSWIRKLGQDNCAVNALDFDPASGVWEAVVINGRRASGRADRFDSEA*
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mRNA from alignment at H-elongata_contig64161:2..3030-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig64161.14002.1 ID=mRNA_H-elongata_contig64161.14002.1|Name=mRNA_H-elongata_contig64161.14002.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3029bp|location=Sequence derived from alignment at H-elongata_contig64161:2..3030- (Himanthalia elongata Himel1 dioecious)
AGCTTGCATTCCCCCGGTCGAAATACTTGACGAGGGACGAGGCCAATATC GTGACACTTCAGGAGCTAAGATATTATGCAACCACGGACGATGTACAAAA TAGCGAAGATGTCGGAGCGAGGAAGGAAGAAGAAAAGATATCGAGGCGAA AGCTCACAAGGAATGCCCTGCTGGTTGGCGCAGGAGTGGGGACCTCAATG GGGCGCAAACCGCTGAAACAGGCGAAGGCGGTGGCGAAAGCCACAGCGAA AGTGACGGCCAAAGCGGCAGTTGCAGCAGCATCGACCGTCGTAAAGATGC CACCTGTCGTAAGTGCAGCAAACGAGGGCGATACAAGGGTGACACGAGAT TCCACTGTTCGACAGCAAGCGAGTATTATGCCTGGGGAGATGAGCACGTG GCGCTCGACTGTGAGCCGGGATGAAGTTGTGGCGCTCCCCACCGTCGGCG TACGAACGAAGCGCGTGTTATTGGTCCGACATGGACAGGTGTGATGTGAG GAAATATAGAGGGAACATGCTCAAGTACGGTTGAGGGGAAAGGGGCTTTG TGGAGGCGTGTACGTAAACGCATTTCGTATTTCTAACATACATAGACCAC GCATGCCAACAATGCCGGGACGGAGGGATATGCTATCGAGTTTTCGCCGA GTTCCGCAATGATGGTCCCAGCGTTTTTAATCATCAGCCTTACTGTTGCT TCGCCAAGCCGTATATGCCATCGTTGAATTGAACACAACGAGTAGCCAAA TGTTGCTCATTCAGGGGGTATTATTGACTATATTATATTACACCAGACTA TACTACCATGGACCGCAAATAAACTTTAATCGCCGCGCGAACGCACACCA TACACACAACAGTAGTACATGTATAATACACTCATGCTATGATTTGCTGA TAAACACTGCTGATGGAGTACTCGTAAAAGTATATGTTTGCTCTAGAGCT TTCCAACAATCCGTTATTCAGCAGGCATCATAAAGAAGGTTGTGCATTTA TTCGTTTGGAAGAGAGACAAGACTCTTCGACGATGTCTCTTGGCTCACGG GGCACTCTGCATGATATCCTTCTTGCCCAATAAGTAAACAAATTTTCGGT GCTATGCCGCAAGAGATGACCCGGGAGAGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGCAGTGTTCTCCTTTTCATGTAAATA CTTGACGAATTCATAGTTTGTTGAGGCAGCGATGCGATGGTTCGTCCGTT AGACAAGGAAGGTTGTGTATCACTTTTTTCCATGAGATGCCTTGTTGTCA TTTTGTTCCGGCAATTCATTGCGCTTTCACGACCGGTTCCTGACGTCTTT GTTACACACAACCCAACTCTTATGCTTCTTAATTCCTTCGTCAGACTGAC TTCAACAAGCGAAAGATTTGCCAGGGACGACGGTTGAACCCGCCACTCAA CGATGTGGGGCGTGAGCAAGCGCGACAGCTCTTGCCAAACTTCAGTCTGG ATGCCATCGTATGCAGCCCTCTCCGCCGCGCACGGGAAACTGCAGAAATT GTACAAACAAGGTGCGTTTCTCCTGTCACAACGACTTTACTTTCCCGTTC TCCCCGTAGAGGACCATTAATAACGCGGTTGGCCTGTAAGACATGCAGGT GATGAACACAGTTGATATGAATCCCCGCAACAATGATATGAGCCGTTTTG AACGATGGTCGAAAGAGGGTTAGCACGGTCAGCTTCGACGTGTGACCATT GGAGTTATTCGTAGCCGTGTGTTGCTGCCCCCGCCATCACGATAAGATTC CGTCTTGTGACAATTAGTGGGTGACATCCCGAGCGACTAGTTTGATATAA CTTTTAACAAACACTAACCCAGAAAACATAAGGTACTCTGCAGTCATTGA TGGTCTCGCTTTGAATAGTAGGCGATGTGGTCAATGCGGGTGGTATATTA CATTTCAACGCCTAGCAAACTTCAAATACTTTCATAATCTCTTTTCCCTG GTTTCCGGCTTTTTCAAAGCCACCTCGGCACGTCCGTGATCATGTCAAAC GATCTTAACGAGGTAGACTTCGGCGGCGCAGAGGGTCTTCCGCAAGCTGT CGCGGCGGTAGTGTTGGCTCCGTCTTACATGGCGTGGAAGGTTGGGCGCT TCGAGGTGAGATCCGTACGCGCCGGAGAGAGCGGCGAAGATCTGCAACAG AGGACTGCCGCGGCTGTGGAAGTTCTACTGCATGCGTGCACCGAAGGCAG CCAGGTCCGAAATACTCGCCACACCCGCAAACTCGCCGTTTGTGGTAAAG TAAGTGGTGTCTTTTTATAACTTTCGAATTCGCCATGGACTAGGATCCAT TTGGATTTGGAGCAAAATTTATATGAGTAGGGCCGGAGCCGAGCCTGTTG CTTGTGCTGTTGATGTTGCTGTTGCTTTTGTCGTGACGAATACCTAGTTG TTCTGAAGGCGTGCGACTGCACCACGGAGGGCGCCACGTCGTGAATGGTT ACGATGGATAAATATCCCCCATTTTGGTCGCCGTCTTTCCGCCCTTCTCG ATTGTTTCGATTACATAAATCCTTATAAAGTGCCATTCTCTGGCGTTTAC CCAACTTCTGCTGTTTCCCCCCACTAGATGAGGAAGCTCGCATCGTTCTG TACCTGACATGCCTCCTTACCTTGCTTGAGACTCCCAGGTGCTGGCGGTG ACGCACTCGTCGATGATCAAATTTATGCTTGCGACACTTTTGGGGGTGCC GCTTTCGTGGATCAGGAAGTTGGGACAGGACAATTGCGCGGTGAATGCGT TGGATTTTGACCCTGCGTCTGGCGTTTGGGAGGCTGTCGTGATCAACGGA CGACGGGCCAGCGGGAGGGCCGACCGATTTGACAGCGAAGCATAGCAAAA CAGCTTAACGGACGATTTCGTTTCGCTGTTGGTTAAAGTCAAACTTCCCC CACCTCCCACGGGACTGGTACACCGTTTTGCTTGTAAATGACTTTCCTGT GGTTGTCTATAGCCCAGATTTGCACTTCA
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Coding sequence (CDS) from alignment at H-elongata_contig64161:2..3030-

>mRNA_H-elongata_contig64161.14002.1 ID=mRNA_H-elongata_contig64161.14002.1|Name=mRNA_H-elongata_contig64161.14002.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at H-elongata_contig64161:2..3030- (Himanthalia elongata Himel1 dioecious)
ATGGGGCGCAAACCGCTGAAACAGGCGAAGGCGGTGGCGAAAGCCACAGC
GAAAGTGACGGCCAAAGCGGCAGTTGCAGCAGCATCGACCGTCGTAAAGA
TGCCACCTGTCGTAAGTGCAGCAAACGAGGGCGATACAAGGGTGACACGA
GATTCCACTGTTCGACAGCAAGCGAGTATTATGCCTGGGGAGATGAGCAC
GTGGCGCTCGACTGTGAGCCGGGATGAAGTTGTGGCGCTCCCCACCGTCG
GCGTACGAACGAAGCGCGTGTTATTGGTCCGACATGGACAGATGGGGCGC
AAACCGCTGAAACAGGCGAAGGCGGTGGCGAAAGCCACAGCGAAAGTGAC
GGCCAAAGCGGCAGTTGCAGCAGCATCGACCGTCGTAAAGATGCCACCTG
TCGTAAGTGCAGCAAACGAGGGCGATACAAGGGTGACACGAGATTCCACT
GTTCGACAGCAAGCGAGTATTATGCCTGGGGAGATGAGCACGTGGCGCTC
GACTGTGAGCCGGGATGAAGTTGTGGCGCTCCCCACCGTCGGCGTACGAA
CGAAGCGCGTGTTATTGGTCCGACATGGACAGACTGACTTCAACAAGCGA
AAGATTTGCCAGGGACGACGGTTGAACCCGCCACTCAACGATGTGGGGCG
TGAGCAAGCGCGACAGCTCTTGCCAAACTTCAGTCTGGATGCCATCGTAT
GCAGCCCTCTCCGCCGCGCACGGGAAACTGCAGAAATTGTACAAACAAGA
CTGACTTCAACAAGCGAAAGATTTGCCAGGGACGACGGTTGAACCCGCCA
CTCAACGATGTGGGGCGTGAGCAAGCGCGACAGCTCTTGCCAAACTTCAG
TCTGGATGCCATCGTATGCAGCCCTCTCCGCCGCGCACGGGAAACTGCAG
AAATTGTACAAACAAGCCACCTCGGCACGTCCGTGATCATGTCAAACGAT
CTTAACGAGGTAGACTTCGGCGGCGCAGAGGGTCTTCCGCAAGCTGTCGC
GGCGGTAGTGTTGGCTCCGTCTTACATGGCGTGGAAGGTTGGGCGCTTCG
AGGTGAGATCCGTACGCGCCGGAGAGAGCGGCGAAGATCTGCAACAGAGG
ACTGCCGCGGCTGTGGAAGTTCTACTGCATGCGTGCACCGAAGGCAGCCA
GCCACCTCGGCACGTCCGTGATCATGTCAAACGATCTTAACGAGGTAGAC
TTCGGCGGCGCAGAGGGTCTTCCGCAAGCTGTCGCGGCGGTAGTGTTGGC
TCCGTCTTACATGGCGTGGAAGGTTGGGCGCTTCGAGGTGAGATCCGTAC
GCGCCGGAGAGAGCGGCGAAGATCTGCAACAGAGGACTGCCGCGGCTGTG
GAAGTTCTACTGCATGCGTGCACCGAAGGCAGCCAGGTGCTGGCGGTGAC
GCACTCGTCGATGATCAAATTTATGCTTGCGACACTTTTGGGGGTGCCGC
TTTCGTGGATCAGGAAGTTGGGACAGGACAATTGCGCGGTGAATGCGTTG
GATTTTGACCCTGCGTCTGGCGTTTGGGAGGCTGTCGTGATCAACGGACG
ACGGGCCAGCGGGAGGGCCGACCGATTTGACAGCGAAGCATAGGTGCTGG
CGGTGACGCACTCGTCGATGATCAAATTTATGCTTGCGACACTTTTGGGG
GTGCCGCTTTCGTGGATCAGGAAGTTGGGACAGGACAATTGCGCGGTGAA
TGCGTTGGATTTTGACCCTGCGTCTGGCGTTTGGGAGGCTGTCGTGATCA
ACGGACGACGGGCCAGCGGGAGGGCCGACCGATTTGACAGCGAAGCATAG
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