mRNA_H-elongata_contig62915.13870.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A6H5KI44_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI44_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.400e-89 Identity = 203/394 (51.52%), Postives = 228/394 (57.87%), Query Frame = 1
Query: 184 ARDGSGSTAVVAFVTAVHVIVANAGDSRAVLIMLDNP-------------------------------------------GTGSESGSGAS---------KMENSETGSTENSEG----GTRPC---------DSVRLEAAASPGQKDEEFEIDEGMDKILAALGAMGLREDTSKARRAGGGSDEGAVKGGSSVINPSGKRGRAVEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSGPPPPPSTVGGRMLFGDGQ 1170
ARDGSGSTAVV+FVT HVIVANAGDSRA+LIM+ G E GA+ K+ E +G G RP DSVRLE DE E D G DKI L +M L + + + VTAMSRDHTA DE E+ERVT AGGKAFEV Y + DGT +V+RTAYD+ VEGQSV+PTRGFGD+YYKQ+K DG+LLPPA+QVVT CPEIMVHERGSSG EE+LLLACDGVWDVFDNQD GEFLV L+ P+ V GE LA ACDALV ECLRRGSTDNITAMAVSLGSGPPP PS+ GGR+LF DGQ
Sbjct: 759 ARDGSGSTAVVSFVTPAHVIVANAGDSRAILIMVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGVEDRKGAAETMAEALGLKLGGERNSGVEEVKGEATTGGRPAAEGEWGGLNDSVRLEDQEE--DDDEGCEFD-GADKIRELLESMMLGGEAKEXXXX-------XXXXXXXXXXXXXXXXGGLMVTAMSRDHTAADEAERERVTAAGGKAFEVPYTEPDGTTCVVVRTAYDDKVEGQSVVPTRGFGDLYYKQRKDDDGNLLPPAQQVVTSCPEIMVHERGSSGKEELLLLACDGVWDVFDNQDAGEFLVKTLDVPVGQVTGEQLALACDALVKECLRRGSTDNITAMAVSLGSGPPPRPSSAGGRVLFSDGQ 1142
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: D8LND4_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND4_ECTSI) HSP 1 Score: 278 bits (711), Expect = 2.700e-76 Identity = 181/384 (47.14%), Postives = 218/384 (56.77%), Query Frame = 1
Query: 184 ARDGSGSTAVVAFVTAVHVIVANAGDSRAVLIML--DNPGTGSESGSGASKMENSETGS-----------------TENSEGGTRPCDS---VRLEAAASPGQKDEEFEIDEGMDKILAALGAMGLREDTSKARRAGGGSDEGAVKGGSSVINPSGKR----GRA-----------------------------VEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSGPPPPPSTVGGRMLFGDGQ 1170
ARDGSGSTAVV+ VT HVIVANAGDSRA+LIM+ D+ SK+ + G+ EN +G +RL + G ++E+ E + ++ A GL + + +EG G+ I + G A V VTAMSRDHTA DE E+ERVT AGGKAFEV Y ++DGT +V+RTAYD+ VEGQSV+PTRGFGD+YYKQ+ EIMVHERGSSG EE+LLLACDGVWDVF +QD GEFLV L+ P+ V GE LA ACDALV+ECLRRGSTDNITAMAVSLGSGPPP PS+ GGR+LF DGQ
Sbjct: 539 ARDGSGSTAVVSLVTPAHVIVANAGDSRAILIMVPPDHNSXXXXXXXXTSKVNSRSDGTKITASGXXXXXXSSRVGAENKKGAAETMAEALGLRLGGERNSGVEEEKGEEATTVGRLEAEGEGGGLNDSVRLEDQEEDDDNEGCEFDGADKIRELLESMMLGGEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMVTAMSRDHTAEDEAERERVTAAGGKAFEVPYTEQDGTTCVVVRTAYDDKVEGQSVVPTRGFGDLYYKQRXXXXXXXXXXXXXXXXXXXEIMVHERGSSGQEELLLLACDGVWDVFKDQDAGEFLVKTLDVPVGQVTGEQLALACDALVNECLRRGSTDNITAMAVSLGSGPPPRPSSAGGRVLFSDGQ 922
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.820e-33 Identity = 93/194 (47.94%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 568 VINPSGKRGRAVEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERG-SSGS--------EEILLLACDGVWDVFDNQDVGEFLVSQLER--PIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSG 1116
+++P G +V + +S DHT + E EK RV AGG A E + E+ E V+R Y +GQSV+P+R FGD YYKQ DG LL P +QVVT PE+ + ER SSGS ++ LLLACDG+WDVF +QD GE L L+ P GEDLA ACDAL+ E L+R S DNIT MA+ L SG
Sbjct: 937 LVSPQGAG--SVTILPLSEDHTGQVEAEKARVIAAGG-ALEERTWTEEEVEHCVLRIKYCAEAKGQSVVPSRSFGDFYYKQCCDADGQLLSPDKQVVTAFPEVRIVERPRSSGSSPALGGVQDQYLLLACDGLWDVFSSQDAGEMLWRILQDLCPARTPTGEDLAIACDALIAEALKRKSEDNITVMAIRLASG 1127
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A7S4IS57_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IS57_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.950e-18 Identity = 105/354 (29.66%), Postives = 148/354 (41.81%), Query Frame = 1
Query: 199 GSTAVVAFVTAVHVIVANAGDSRAVLIMLDNPGTGSESGSGASKMENSETGSTENSEGGTRP--------CDSVRLEAAASPGQKDEE-FEIDEGMDK-----------------ILAALGAMGLREDTSKARRAGGGSDEGAVKGGSSVINPSGKRGRAVEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDED-------GTESMVI---RTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLER-----------PIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSGP 1119
GSTA+VA VT V+VAN GD R +L+ G G+ E ++ G N+EG T LE P +E+ FE +G ++ GL ++ E K S PS V TA+S D + E+ER+ AG RD D G E ++ + + +G + +R FGD Y K D LPP EQ V P++ +H R + + L+LACDGVWDV N++VG+F+ +++R ED D D L++ECL RGSTDN+TA+ VSL P
Sbjct: 36 GSTAIVAVVTDEAVVVANVGDCRCILVQKTKVAEG---GTPILTEEPAQGGERLNTEGRTSKGVDLSEGSSGEAPLEGDKKPRPSEEQQFEEAKGTEEKSLSDPPQXXXXXXXXXXXXXXXXXGLVTTAAE-------QPEAPEKAEGSAPTPSTAATATVSATALSEDSKPNLDEERERIERAGLMVMPDVIRDPDVVSEETEGAEDNLVTLWKVVKGDPGKGDRLGMSRAFGD--YDFKANAD---LPPEEQAVVCTPDLRIHPRDGT-MDLYLVLACDGVWDVMSNEEVGQFVHGRVDRIRSEMGRGGADGHEDADEGLWGTVADQLLEECLGRGSTDNMTAVIVSLEKAP 373
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A7S1VKM7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKM7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.750e-17 Identity = 68/177 (38.42%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 577 PSGKRGRAVEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSL 1107
P+ KR V V A+S DH EK RV AG E + +E G + ++ + EN G + +R FGD YK L EQ V PEI +H R + + L+LACDGVWDV +N VG+F+V +E ++ + L + DAL+ ECL RGS DN+TA+ V+L
Sbjct: 502 PTTKRTTTV-VQALSFDHKPDRTEEKARVEKAGLSVVEESFVEE-GIKHVIPKVQLTEN--GDRLAVSRAFGDFEYKTNPS-----LSSQEQAVICMPEIEIHRRNAK-KDIYLVLACDGVWDVMENDQVGKFVVDHVEDLVKQEATDILPQVGDALLTECLNRGSQDNMTAIVVAL 668
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A7R9ZAU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAU8_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.820e-15 Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 778 TRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLER----------PIEDVDGEDLARACDALVDECLR-RGSTDNITAMAVSLGS 1113
+R FGD YK +G L +Q VT PE+ VH R G + L+LACDGVWDV N++VG F+ ++E E+ DG +A+A D L+DEC++ RGS DN+TA+ V LGS
Sbjct: 8 SRAFGDFDYK----ANGDLSA-RDQAVTAEPEVRVHPR-DGGRDLYLVLACDGVWDVMTNEEVGRFVHEEVEALRRTSRGDGGEEEEEDGVLMAKAADRLLDECVKNRGSEDNVTALIVFLGS 124
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A7R9ZMV8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMV8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 5.280e-15 Identity = 61/179 (34.08%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 601 VEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLE----RPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSGPPP 1125
+ V MS DH + ++E ER+ AG K E ++ DE+ E +V N G + +R FGD YK K L P EQ V P++ +H R + L+LACDG+WDV N +VG+++ +++ +P +D L + DAL+ CL +GS DN++ + V+L G P
Sbjct: 61 INVIPMSFDH--KPDKEAERIENAGLKVQESRFIDENEKE-LVFHKIIRSN--GDQLAVSRAFGDFEYKTNK-----TLGPEEQAVIAVPDVKIHPRNVQ-VDLYLVLACDGIWDVMSNVEVGKYVSQEMDAIKTQPRR-IDSTVLPQVGDALLSTCLDKGSRDNMSVVLVALNQGAEP 227
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A812L412_9DINO (Ppm1a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L412_9DINO) HSP 1 Score: 87.8 bits (216), Expect = 6.650e-15 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = 1
Query: 607 VTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGSGPPPPPSTV 1140
V +S DH +E E +R+T AGG ++ +R V G + +R GD YK + LP +Q V+ PE VH+R ++ +++ L+LACDG+WDV +N +VG FL ++ +++ L D LV ECLR GS DN++ + V+L + P P P +
Sbjct: 148 VKPLSFDHKPYNEAEAKRITEAGG--------------TVTMR-----RVNGDLAV-SRALGDYVYKHSR-----TLPAEKQQVSPEPEFTVHKRDAA-TDQFLVLACDGIWDVMENDEVGAFLQERVAAGVDN-----LGELADCLVRECLRLGSRDNMSVVLVALPAAPKPTPEAI 294
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A448ZGN4_9STRA (DNA topoisomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGN4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.450e-15 Identity = 64/178 (35.96%), Postives = 93/178 (52.25%), Query Frame = 1
Query: 598 AVEVTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDE-NVEGQSVMPT-----RGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGEDLARACDALVDECLRRGSTDNITAMAVSLGS 1113
AVE A+S DH+ E ER+ AG + V+ EDG ES++ + +E + E + T R FGD +K LP A Q V P ++V R ++ +L+LACDG+WDV NQ ++++ E E L+ A DAL+ ECL R S DN++A+ VSLG+
Sbjct: 1714 AVEAIALSEDHSPGLPGEAERIAAAGFRTEAVRVAGEDGKESLIHKVVGNEASPEASTKTSTQLAVSRAFGDFEFKAN-----DTLPAAGQAVVAVPGVVVRARDPQ-TDRLLVLACDGIWDVASNQTAAGLVLARWEGTREPRTPRVLSDAADALLLECLGRESRDNLSAVLVSLGA 1885
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Match: A0A7S2XJ05_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJ05_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.580e-14 Identity = 58/168 (34.52%), Postives = 84/168 (50.00%), Query Frame = 1
Query: 607 VTAMSRDHTARDEREKERVTLAGGKAFEVKYRDEDGTESMVIRTAYDENVEGQSVMPTRGFGDMYYKQKKGTDGSLLPPAEQVVTVCPEIMVHERGSSGSEEILLLACDGVWDVFDNQDVGEFLVSQLERPIEDVDGE-DLARACDALVDECLRRGSTDNITAMAVSL 1107
V +S DH D E+ R+ AGGK V + DG + +RG GD +K + LPP +Q VT CPEI+V R SS +E ++LACDG+WDV N+ + + + L+ +GE D+ C+ ++D CL R S DN+T V+L
Sbjct: 27 VLPLSFDHKPTDPPEEARIVAAGGK---VSIKRVDG-----------------DLAVSRGLGDFSFKNRPD-----LPPDQQKVTCCPEILVEPRQSS-QDEFIILACDGIWDVASNESCAKLVHAILD------EGETDIGLVCEEILDTCLERDSRDNMTVAMVTL 162 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62915.13870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62915.13870.1 >prot_H-elongata_contig62915.13870.1 ID=prot_H-elongata_contig62915.13870.1|Name=mRNA_H-elongata_contig62915.13870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp MLDNPGTGSESGSGASKMENSETGSTENSEGGTRPCDSVRLEAAASPGQKback to top mRNA from alignment at H-elongata_contig62915:2..3463+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62915.13870.1 ID=mRNA_H-elongata_contig62915.13870.1|Name=mRNA_H-elongata_contig62915.13870.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3462bp|location=Sequence derived from alignment at H-elongata_contig62915:2..3463+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62915:2..3463+ >mRNA_H-elongata_contig62915.13870.1 ID=mRNA_H-elongata_contig62915.13870.1|Name=mRNA_H-elongata_contig62915.13870.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at H-elongata_contig62915:2..3463+ (Himanthalia elongata Himel1 dioecious)back to top |