mRNA_H-elongata_contig62752.13854.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: D7FM33_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM33_ECTSI) HSP 1 Score: 233 bits (595), Expect = 4.650e-68 Identity = 153/258 (59.30%), Postives = 183/258 (70.93%), Query Frame = 1
Query: 259 SRFSREKDGDDQG-----RPGPGSP------LERPQPGGRLSGGSAGPSSP-APHFSQMSIKETKE--AKVLPTPEREPXXXXXXXXXXXXXXXXDPVEVARASAEEALATGKRGIELKAFVMAQEKKTTAGALLTVALKDIATPQDMKWSRQDDIGAALVALSANK--TKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
SRFSR+ D RPG GSP L RP GG GG +SP A S+MSIKE K+ A XXXXXXXXXXXX DPVEVARASA EALA+GKRG +LK FV+AQEK+TTAGALL AL+ A+P+DMKW +D+ G AL ALS K T++Q+G+IYAV+AKC+++GFPK AVVQTIF+GMYN DLC EEAF+EWK DDV++TA GR+KA+MQTTPWFVWLESVEEEE+E++
Sbjct: 384 SRFSRDSHDDXXXXGAYRRPGAGSPEARASPLARPSGGGGFKGGRDSSTSPTAASLSKMSIKEPKKEVAAXXXXXXXXXXXXXXXXXXXXXEPKEDPVEVARASAAEALASGKRGKDLKEFVLAQEKRTTAGALLAAALEGTASPEDMKWMGKDEFGPALTALSTGKDSTQQQMGMIYAVVAKCHQLGFPKIGGAAVVQTIFMGMYNDDLCEEEAFIEWK---DDVDSTAEGRMKAVMQTTPWFVWLESVEEEEDEDE 638
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A329T1N6_9STRA (W2 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1N6_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 4.520e-15 Identity = 58/165 (35.15%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 511 EVARASAEEALATGKRGIELKAFVMAQEKKT--TAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
EV R + ++ LA+GK+G EL KK GA++ T A +D+A W G L A+ + K+Q+ +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ A GR+KAI+QT+ W WLE+ EEE EEED
Sbjct: 66 EVDRETMKQVLASGKKGEELAEAAKEIFKKNGRPTGAVVFETVTNAAEDVAK-SSANWIAMPAYGELLKFAMEDSDKKDQMEALYALQIFLNKHDFPK----GLIEKCFMALYSLDIIDETGFFEYKY---DVDGDAPGRMKAIIQTSTWLTWLETPEEESEEED 222
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: G5ABF4_PHYSP (W2 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ABF4_PHYSP) HSP 1 Score: 79.7 bits (195), Expect = 1.830e-14 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 1
Query: 532 EEALATGKRGIELKAF---VMAQEKKTTAGAL---LTVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
++ LA+GK+G EL A + A+ + + + +T A +D+A W G L +A+ KEQ+ +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ GR+KAI+QT+ W WLE+ EEE EEED
Sbjct: 2 KQVLASGKKGEELAAVAKDIFAKNGRPSGAVVFEAVTEATEDVAKAS-ANWIALPAYGELLKLAMEDTDKKEQMHALYALQVFLNKHDFPK----GLIEKCFMALYSLDIIEETGFFEYKY---DVDGDVPGRMKAIIQTSNWLTWLETPEEESEEED 151
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A6A3WZ36_9STRA (W2 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WZ36_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 5.910e-14 Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 520 RASAEEALATGKRGIELKAFVMAQEKKT--TAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
R + ++ LA+GK+G EL A K +GA++ T A +D+A W G L A+ KEQ+ +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ GR+KAI+QT+ W WLE+ EEE EEED
Sbjct: 280 RETMKQVLASGKKGEELAAVAKEAFAKNGRPSGAVVFEAVTTAAEDVAKAS-ANWIAMSAYGELLKFAMEDTDKKEQMHALYALQVFLNKHDFPK----GLIEKCFMALYSLDIIEETGFFEYKY---DVDGDVPGRMKAIIQTSSWLTWLETPEEESEEED 433
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: W2R9I9_PHYPN (W2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R9I9_PHYPN) HSP 1 Score: 82.0 bits (201), Expect = 1.050e-13 Identity = 56/165 (33.94%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 511 EVARASAEEALATGKRGIELKAFVMAQEKKT--TAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
EV R + ++ LA+GK+G EL KK +GA++ T A +D+A W G L A+ + K+Q+ +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ GR+KAI+QT+ W WLE+ EEE +EED
Sbjct: 272 EVDRETMKKVLASGKKGEELAEVAKEIFKKNGRPSGAVVFEAVTAAAEDVAK-SSANWIALPAYGELLKFAMEDSDKKDQMEALYALQVFLNKYDFPK----GLIEKCFMALYSLDIIDETGFFEYKY---DVDGDVPGRMKAIIQTSTWLTWLETPEEESDEED 428
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A2P4X1N8_9STRA (W2 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X1N8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.320e-13 Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 511 EVARASAEEALATGKRGIELKAFVMAQEKKT--TAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
+V R + ++ LA+GK+G EL KK +GA+L T A +D+A W G L A+ + K+Q+ +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ GR+KAI+QT+ W WLE+ EEE EE++
Sbjct: 248 DVDRETMKQVLASGKKGEELAQVAKDIFKKNGRPSGAVLFEAVTTAAEDVAK-SSANWIAMPAYGELLKFAMEDSDKKDQMEALYALQIFLNKYDFPK----GLIEKCFMALYSLDIIDETGFFEYKY---DVDGDVPGRMKAIIQTSTWLTWLETPEEESEEDE 404
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A0P1B802_PLAHL (Hypothetical cleavage-induced protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B802_PLAHL) HSP 1 Score: 80.1 bits (196), Expect = 4.410e-13 Identity = 60/176 (34.09%), Postives = 93/176 (52.84%), Query Frame = 1
Query: 511 EVARASAEEA----------LATGKRGIEL--KAFVMAQEKKTTAGALL----TVALKDIATPQDMKWSRQDDIGAAL--VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
E ASA++A LA+GK+G EL A + + K +GA+L T A +D+A W G L V + ++K K+Q+G +YA+ N+ FPK +++ F+ +Y+ D+ E F E+K DV+ GR+KAI+QT+ W WLE+ EEE ++ED
Sbjct: 246 ETEEASAKKAKADRETMNLVLASGKKGEELAQNAKEIFKSKGRPSGAVLFETVTAAAEDVAK-SSANWIAMPAFGELLKLVMVDSDK-KDQMGALYALQVFLNKYDFPK----GLLEKCFMALYSLDIIDEAGFFEYKY---DVDGDVPGRMKAIIQTSTWLTWLETPEEESDDED 412
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A4D9D6E0_9STRA (W2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6E0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.030e-13 Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 1
Query: 517 ARASAEEA------LATGKRGIELKAFVMAQEKKTTA--GALLTVALKDIATPQDMK---WSRQDDIGAALVALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEE 966
A+A+AE A +A+G +G EL + AQEK A A+L V L + + + + W G L L A T +Q +YAV G+PK +++ +F G+Y DL E AF W+ D + N + KA++QTTPWF WLE+ +E
Sbjct: 360 AKAAAECADVAKALVASGLKGKEL--WAAAQEKGDAAKGSAILEVVLGSVDSNEALAGLGWMAGAQYGTVLKRLLAKDTSDQKEAVYAVQRVVEARGYPKVGVDPLLEKLFHGLYGADLLDEAAFTGWRDDDREEGN----KRKAVVQTTPWFQWLETADE 514
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A662XJK7_9STRA (W2 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJK7_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.860e-13 Identity = 55/165 (33.33%), Postives = 90/165 (54.55%), Query Frame = 1
Query: 511 EVARASAEEALATGKRGIELKAFVMAQEKKT--TAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
EV R + ++ LA+GK+G EL A K +GA+L T A +D+A W G L + + + ++Q+ +YA+ N+ FPK V++ F+ +Y+ D+ + AF E+K DV++ + GR+KAI+QT+ W WLE+ EEE +EE+
Sbjct: 282 EVDRETMKQVLASGKQGEELAAVAKDLFAKLGRPSGAVLFESVTNAAEDVAKAS-ANWIAMPAYGELLKLGMESADKQDQLHALYALQIFLNQHDFPK----GVMEKCFMALYSLDIIEDAAFFEYKY---DVDSDSPGRMKAIIQTSSWLTWLETPEEESDEEE 438
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Match: A0A3R7K1N8_9STRA (W2 domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1N8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 9.410e-13 Identity = 54/165 (32.73%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 511 EVARASAEEALATGKRGIELKAFV--MAQEKKTTAGALL----TVALKDIATPQDMKWSRQDDIGAAL-VALSANKTKEQVGIIYAVMAKCNEMGFPKEEQGAVVQTIFIGMYNCDLCAEEAFLEWKVSDDDVNNTAAGRLKAIMQTTPWFVWLESVEEEEEEED 984
E R + ++ LA+GK+G EL A + ++ + +G++L T A +D+A W G L + + K+Q+ +YA+ N+ FPK V++ F+ +Y+ D+ + F E+K DV+ GR+KAI+QT+ W WLE+ EEE EEED
Sbjct: 183 EADRETMKKVLASGKKGEELVAVAKDLFGKQGSPSGSVLFETVTNAAEDVAK-SSANWIALPAYGELLKFGMEKSDKKDQMEALYALQVFLNKYEFPK----GVMEKCFMALYSLDIIEDVGFFEYKY---DVDGDVPGRMKAIIQTSSWLTWLETPEEESEEED 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62752.13854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62752.13854.1 >prot_H-elongata_contig62752.13854.1 ID=prot_H-elongata_contig62752.13854.1|Name=mRNA_H-elongata_contig62752.13854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=327bp MGGGGGGFDRRDDDRRSGMGGGGFDRRDDDRRGGGFDRREESRGMTMSGSback to top mRNA from alignment at H-elongata_contig62752:18..1599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62752.13854.1 ID=mRNA_H-elongata_contig62752.13854.1|Name=mRNA_H-elongata_contig62752.13854.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1582bp|location=Sequence derived from alignment at H-elongata_contig62752:18..1599+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62752:18..1599+ >mRNA_H-elongata_contig62752.13854.1 ID=mRNA_H-elongata_contig62752.13854.1|Name=mRNA_H-elongata_contig62752.13854.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1962bp|location=Sequence derived from alignment at H-elongata_contig62752:18..1599+ (Himanthalia elongata Himel1 dioecious)back to top |