mRNA_H-elongata_contig62149.13784.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: D8LLF7_ECTSI (Enoyl-(Acyl carrier protein) reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF7_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 2.510e-141 Identity = 207/233 (88.84%), Postives = 223/233 (95.71%), Query Frame = 1
Query: 7 VYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKEE 702
VYPLDAVYD PED V+TNKRYAGL+GFTIQE A+QIKAD+G VDI+VHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQ+F PIMPKGG+V+SLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGR++GVRVNTISAGPLKSRAASAIG +KGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSS++SRVITG TMYVDNGLNTMGLAVDS+SMK++
Sbjct: 130 VYPLDAVYDVPEDXXXXVKTNKRYAGLSGFTIQEVAEQIKADYGTVDIVVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQKFAPIMPKGGSVVSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGREYGVRVNTISAGPLKSRAASAIGKEKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSDMSRVITGTTMYVDNGLNTMGLAVDSESMKKD 362
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A0G4H2A5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H2A5_9ALVE) HSP 1 Score: 384 bits (986), Expect = 1.060e-131 Identity = 186/231 (80.52%), Postives = 215/231 (93.07%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIGDKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSM 693
AKVYPLDAV+DTPEDVPEE RTNKRYAGL G++IQE DQ+ D+GK+DILVHSLANGPEVTKPLLETSR+GYLAASSASAYS+VS++QRFGPIM +GG+V+SLTYIASE+ IPGYGGGMSSAKAQLESDTRVLAWEAGRK+G+RVNTISAGPLKSRAASAIG KG +TFI+YAIDY+KAN+PL QDL++ DV NAALFL S LSR ++G+T+YVDNGL++MGLAVDSQ+M
Sbjct: 121 AKVYPLDAVFDTPEDVPEETRTNKRYAGLDGYSIQEVVDQVAKDYGKIDILVHSLANGPEVTKPLLETSRKGYLAASSASAYSLVSMIQRFGPIMNEGGSVMSLTYIASERTIPGYGGGMSSAKAQLESDTRVLAWEAGRKYGIRVNTISAGPLKSRAASAIGTKGARTFIDYAIDYAKANAPLAQDLFSSDVANAALFLLSPLSRAVSGITLYVDNGLHSMGLAVDSQAM 351
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A0G4GIN5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GIN5_VITBC) HSP 1 Score: 379 bits (972), Expect = 2.630e-129 Identity = 183/234 (78.21%), Postives = 214/234 (91.45%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIGDKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKEE 702
AK+YPLDAV+DTPEDVPEE++ NKRYAGL G+TIQE DQ+ D+GK+DILVHSLANGPEV KPLLETSR+GYLAA+SASAYS+VS+VQRFGPIM GG+VLSLTY+ASE+VIPGYGGGMSSAKA LESDTR LAWEAG+K+G+RVNTISAGPLKSRAA AIG KG+KTFI+YAI YSKANSPLGQDLY +DVG++AL+L S L+R +TG+T+YVDNGL+ MGLAVDS++MK E
Sbjct: 139 AKIYPLDAVFDTPEDVPEEIKDNKRYAGLEGYTIQEVVDQVAKDYGKIDILVHSLANGPEVIKPLLETSRKGYLAANSASAYSLVSMVQRFGPIMNPGGSVLSLTYVASERVIPGYGGGMSSAKAALESDTRTLAWEAGQKYGIRVNTISAGPLKSRAAQAIGGKGQKTFIDYAIAYSKANSPLGQDLYAEDVGSSALYLCSPLARAVTGVTLYVDNGLHAMGLAVDSEAMKME 372
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: B8BXA1_THAPS (Enoyl-reductase [NADH] n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BXA1_THAPS) HSP 1 Score: 375 bits (963), Expect = 7.620e-129 Identity = 186/234 (79.49%), Postives = 216/234 (92.31%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKE 699
AKVYPLDAV+DT EDVPEE++TNKRYAGL G+TI+E A ++AD+GK+DILVHSLANGPEVTKPLLETSR+GYLAASSASAYS VSL+Q+FGPIM +GG +LSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+ VRVNT+SAGPLKSRAASAIG + G+KTFIEYAIDYSKAN+PL QDLYNDDVGN+ALFL S L+R +TG+T+YVDNGL+ MG+A+DS+SM +
Sbjct: 76 AKVYPLDAVFDTAEDVPEEIKTNKRYAGLDGYTIEEVAKAVEADYGKIDILVHSLANGPEVTKPLLETSRKGYLAASSASAYSAVSLLQKFGPIMNEGGNMLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAFEAGRKWNVRVNTVSAGPLKSRAASAIGKEPGQKTFIEYAIDYSKANAPLAQDLYNDDVGNSALFLCSGLARTVTGVTLYVDNGLHAMGMALDSESMAD 309
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A7S2E1Y7_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2E1Y7_9STRA) HSP 1 Score: 379 bits (972), Expect = 9.340e-129 Identity = 188/233 (80.69%), Postives = 215/233 (92.27%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMK 696
AKVYPLDAV+DTP+D+P+E++ NKRYAGL GFTI E ADQI+ D+GK+DILVH+LANGPEVTKPLLETSR+GYLAASSASAYS VSL+Q+FGPIM +GG +LSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+GVRVNTISAGPLKSRAASAIG + G+KTFIEYAIDYSKAN+PL QDLYNDDVGNA LFL S L+RVITG TMYVDNGLN MG+++DS +++
Sbjct: 175 AKVYPLDAVFDTPDDIPDEIKENKRYAGLEGFTISEVADQIEKDYGKIDILVHALANGPEVTKPLLETSRKGYLAASSASAYSAVSLLQKFGPIMNEGGNMLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAYEAGRKWGVRVNTISAGPLKSRAASAIGKEPGQKTFIEYAIDYSKANAPLAQDLYNDDVGNAGLFLCSPLARVITGTTMYVDNGLNCMGMSLDSNALE 407
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A7S3DPZ1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPZ1_9STRA) HSP 1 Score: 375 bits (963), Expect = 4.990e-128 Identity = 185/234 (79.06%), Postives = 216/234 (92.31%), Query Frame = 1
Query: 4 KVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKEE 702
KVYPLDAV+DTP+D+P+E+++NKRYAGL G+TI E A + AD+GK+DILVHSLANGPEVTKPLLETSR+GYLAASSASAYS VSL+Q FGPIM +GG++LSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+GVRVNTISAGPLKSRAASAIG + GKKTFIEYAIDYS AN+PL QDLY+DDVGNA+LFL+S +SR +TG+T+YVDNGL+ MG+A+DS SMK+E
Sbjct: 127 KVYPLDAVFDTPDDIPDEIKSNKRYAGLDGYTISEVAANVAADYGKIDILVHSLANGPEVTKPLLETSRKGYLAASSASAYSAVSLLQSFGPIMNEGGSMLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAYEAGRKWGVRVNTISAGPLKSRAASAIGKEPGKKTFIEYAIDYSNANAPLAQDLYSDDVGNASLFLNSPMSRTVTGVTLYVDNGLHAMGMALDSVSMKQE 360
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A7S4JI71_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JI71_9STRA) HSP 1 Score: 373 bits (958), Expect = 2.870e-127 Identity = 182/231 (78.79%), Postives = 214/231 (92.64%), Query Frame = 1
Query: 4 KVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIGDKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMK 696
K+YPLDAV+D P+DVPE+V++NKRYAGL GFTI E A Q++AD+GK+DILVH+LANGPEV KPLLETSR+GYLAASSASAYSMVSLVQ+FGPIM +GG+VLSLTYIASE VIPGYGGGMSSAKAQLESDTRVLA+EAGRK+G+RVNTISAGPLKSRAASAIG +KTFIEY IDYSKAN+PL QDLY+DDVGN+ +FLSS L+R +TG+TMYVDNGL+ MG+AVDS++++
Sbjct: 134 KIYPLDAVFDDPDDVPEDVKSNKRYAGLDGFTISEVAKQVEADYGKIDILVHALANGPEVVKPLLETSRKGYLAASSASAYSMVSLVQKFGPIMNEGGSVLSLTYIASEAVIPGYGGGMSSAKAQLESDTRVLAFEAGRKWGIRVNTISAGPLKSRAASAIGKGTEKTFIEYVIDYSKANAPLSQDLYSDDVGNSGMFLSSPLARTVTGITMYVDNGLHAMGMAVDSKALE 364
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A7S2PIF3_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2PIF3_9STRA) HSP 1 Score: 369 bits (948), Expect = 1.160e-125 Identity = 183/233 (78.54%), Postives = 213/233 (91.42%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMK 696
AKVYPLDAV+DTPEDVPEE+ +NKRYAGL G+TI E AD + AD+GK+DI+VHSLANGPEVTKPLLETSR+GYLAASSASAYS VS++Q+F PIM +GG+ LSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+G+RVNTISAGPLKSRAASAIG + G+KTFIEYAIDYS AN+PL QDLY+DDVGN ALFL+S +R ITG+T+YVDNGLN MG+A+DS++M+
Sbjct: 136 AKVYPLDAVFDTPEDVPEEILSNKRYAGLDGYTISEVADAVAADYGKIDIVVHSLANGPEVTKPLLETSRKGYLAASSASAYSAVSILQKFAPIMNEGGSFLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAYEAGRKYGLRVNTISAGPLKSRAASAIGKEPGQKTFIEYAIDYSSANAPLAQDLYSDDVGNTALFLNSPWARTITGVTLYVDNGLNCMGMALDSKAME 368
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A7S3LAN8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAN8_9STRA) HSP 1 Score: 367 bits (941), Expect = 8.970e-125 Identity = 182/235 (77.45%), Postives = 214/235 (91.06%), Query Frame = 1
Query: 4 KVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG-DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKEEA 705
K+YPLDAV+D P DVP+E++TNKRY GL FTI E A+ +KAD+GK+DILVHSLANGPEVTKPLLET+R+GYLAASSASAYS VSL+Q+FGPIM +GG +LSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+ +RVNTISAGPLKSRAASAIG + G+KTFIEYAIDYSKANSPL QDLY+DDVGNA+LFL+S ++R ITG+T+YVDNGL+ MG+AVDS++M+ A
Sbjct: 126 KIYPLDAVFDEPSDVPDEIKTNKRYQGLDHFTIAEVAEAVKADYGKIDILVHSLANGPEVTKPLLETTRKGYLAASSASAYSAVSLLQKFGPIMNEGGCMLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAYEAGRKWNIRVNTISAGPLKSRAASAIGKEPGQKTFIEYAIDYSKANSPLPQDLYSDDVGNASLFLNSPMARTITGVTLYVDNGLHAMGMAVDSKAMEGAA 360
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Match: A0A4D9D0A7_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0A7_9STRA) HSP 1 Score: 366 bits (939), Expect = 1.380e-124 Identity = 184/236 (77.97%), Postives = 210/236 (88.98%), Query Frame = 1
Query: 1 AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDILVHSLANGPEVTKPLLETSRRGYLAASSASAYSMVSLVQRFGPIMPKGGTVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRVLAWEAGRKFGVRVNTISAGPLKSRAASAIG--DKGKKTFIEYAIDYSKANSPLGQDLYNDDVGNAALFLSSELSRVITGLTMYVDNGLNTMGLAVDSQSMKEE 702
AK+YPLDA +D PEDVPE V+TNKRYA L G+TI E A +++ DFGK+DILVHSLANGPEVTKPLLETSR GYL ASSASAYSMVSLVQ F PIM +GG+VLSLTYIASEKVIPGYGGGMSSAKAQLESDTR LA+EAGRK+ +RVNTISAGPLKSRAASAIG +KGKKTFIEYAIDYS+AN+PL QDLY DDVG+ LFLSS L+R +TG+TMYVDNGL+ MG+A+DS +M++E
Sbjct: 118 AKIYPLDATFDRPEDVPEAVKTNKRYASLGGYTISEVAKEVEKDFGKIDILVHSLANGPEVTKPLLETSRNGYLTASSASAYSMVSLVQHFAPIMNEGGSVLSLTYIASEKVIPGYGGGMSSAKAQLESDTRTLAFEAGRKYKLRVNTISAGPLKSRAASAIGGGEKGKKTFIEYAIDYSRANAPLAQDLYADDVGSTGLFLSSPLARCVTGVTMYVDNGLHAMGMALDSIAMQQE 353 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62149.13784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62149.13784.1 >prot_H-elongata_contig62149.13784.1 ID=prot_H-elongata_contig62149.13784.1|Name=mRNA_H-elongata_contig62149.13784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp AKVYPLDAVYDTPEDVPEEVRTNKRYAGLTGFTIQEAADQIKADFGKVDIback to top mRNA from alignment at H-elongata_contig62149:817..3069- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62149.13784.1 ID=mRNA_H-elongata_contig62149.13784.1|Name=mRNA_H-elongata_contig62149.13784.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2253bp|location=Sequence derived from alignment at H-elongata_contig62149:817..3069- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62149:817..3069- >mRNA_H-elongata_contig62149.13784.1 ID=mRNA_H-elongata_contig62149.13784.1|Name=mRNA_H-elongata_contig62149.13784.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig62149:817..3069- (Himanthalia elongata Himel1 dioecious)back to top |