mRNA_H-elongata_contig61658.13718.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: D7G000_ECTSI (Coiled-coil flagellar protein, move backward only 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G000_ECTSI) HSP 1 Score: 134 bits (338), Expect = 4.740e-35 Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGLQ 252
VEQQI+EIEKQN IN LER+MLRLKAMYE AVEQRN AGVQLIDRNDELCVLYEKSNIQETTL EG+LAI KRE+DI+ML LQ
Sbjct: 481 VEQQIVEIEKQNGVINALERDMLRLKAMYEAAVEQRNFAGVQLIDRNDELCVLYEKSNIQETTLKEGSLAITKREEDIRMLRLQ 564
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A7S1CG89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CG89_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.470e-26 Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGLQ 252
VEQQI+EI+K N+ IN +EREML LK YE AV+ RN G+QLIDRNDELC+LYEKSNI E TL +G + +++R+Q+++ML +Q
Sbjct: 148 VEQQIVEIDKLNSIINAMEREMLALKRQYERAVDARNYTGIQLIDRNDELCILYEKSNIHEATLRDGEVKLRERDQEVRMLRIQ 231
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A024UKD7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKD7_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.340e-26 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGL 249
VEQQI++I+K N+ IN+ E+EMLRLK YE AVE RN GVQLIDRNDELC+LYEKSNIQ TLTEG LAIQ+++Q +ML +
Sbjct: 581 VEQQIVQIDKLNSIINMTEKEMLRLKKKYEIAVEARNSTGVQLIDRNDELCILYEKSNIQTKTLTEGELAIQEKDQQSRMLNI 663
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A485L0Y5_9STRA (Aste57867_13890 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Y5_9STRA) HSP 1 Score: 108 bits (271), Expect = 8.080e-26 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGL 249
VEQQI++I+K N+ IN+ E+EMLRLK YE AVE RN GVQLIDRNDELC+LYEKSNIQ TLTEG LAIQ+++Q +ML +
Sbjct: 581 VEQQIVQIDKLNSIINMTEKEMLRLKKKYEIAVEARNSTGVQLIDRNDELCILYEKSNIQAKTLTEGELAIQEKDQQSRMLHI 663
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A836CM07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM07_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.770e-25 Identity = 57/84 (67.86%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGLQ 252
VEQQI EIE+ NT IN LER+MLRLK YE AVE RN AGVQLIDRNDELCVLYEK+N+QE TL G A++ +E +++ML LQ
Sbjct: 391 VEQQITEIERLNTIINGLERDMLRLKGRYEGAVEARNAAGVQLIDRNDELCVLYEKANLQEKTLEAGAAAVRAKEGELRMLRLQ 474
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A067CNG4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNG4_SAPPC) HSP 1 Score: 107 bits (267), Expect = 2.800e-25 Identity = 55/83 (66.27%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGL 249
VEQQI++I+K N+ INV E++MLRLK YE AVE RN GVQLIDRNDELC+LYEK NIQ TLT+G LAIQ++EQ +ML +
Sbjct: 570 VEQQIVQIDKLNSIINVTEKDMLRLKKQYEIAVEARNSTGVQLIDRNDELCILYEKCNIQAKTLTDGELAIQEKEQQSRMLHI 652
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A1V9Z2P3_9STRA (MBO2, coiled coil flagellar protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z2P3_9STRA) HSP 1 Score: 105 bits (263), Expect = 9.730e-25 Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGL 249
VEQQI++I+K N+ IN+ E+EMLRLK YE AVE RN GV+LIDRNDELC+LYEK NIQ TLT+G LAIQ++EQ +ML +
Sbjct: 578 VEQQIVQIDKLNSIINMTEKEMLRLKKKYEIAVEARNSTGVELIDRNDELCILYEKCNIQAKTLTDGELAIQEKEQQSRMLHI 660
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A7S2RZA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZA3_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.300e-24 Identity = 51/84 (60.71%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGLQ 252
VEQQI+EI+K N+ IN +E+ MLRLK YE AVE RN GVQLIDRNDELC+LYEK+N+QE TL G L ++++E+ +++L LQ
Sbjct: 332 VEQQIVEIDKLNSIINTMEKAMLRLKKQYEVAVENRNFTGVQLIDRNDELCILYEKANLQEETLKTGELGLREKEEQVRLLKLQ 415
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A7S1U464_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U464_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.330e-24 Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGLQ 252
VEQQI+EI+K N+ IN LE +MLRLK +E AVE RN+ GVQLIDRNDELC+LYEK+N+QE TL G +A+ ++E++I++L LQ
Sbjct: 576 VEQQIVEIDKLNSIINSLEGDMLRLKRQFEDAVEARNMTGVQLIDRNDELCILYEKANLQEETLKRGEIALSEKEEEIRLLRLQ 659
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Match: A0A1V9Z3F5_9STRA (MBO2, coiled coil flagellar protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3F5_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.810e-24 Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 1 VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELCVLYEKSNIQETTLTEGTLAIQKREQDIKMLGL 249
VEQQI++I+K N+ IN E++MLRLK YE AVE RN GVQLIDRNDELC+LYEKSNIQ TLT+G LA+Q++EQ +ML +
Sbjct: 580 VEQQIVQIDKLNSIINSTEKDMLRLKKKYEIAVEARNSTGVQLIDRNDELCILYEKSNIQAKTLTDGELALQEKEQQGRMLHI 662 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61658.13718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61658.13718.1 >prot_H-elongata_contig61658.13718.1 ID=prot_H-elongata_contig61658.13718.1|Name=mRNA_H-elongata_contig61658.13718.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp VEQQIIEIEKQNTAINVLEREMLRLKAMYETAVEQRNLAGVQLIDRNDELback to top mRNA from alignment at H-elongata_contig61658:243..1079- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61658.13718.1 ID=mRNA_H-elongata_contig61658.13718.1|Name=mRNA_H-elongata_contig61658.13718.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=837bp|location=Sequence derived from alignment at H-elongata_contig61658:243..1079- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61658:243..1079- >mRNA_H-elongata_contig61658.13718.1 ID=mRNA_H-elongata_contig61658.13718.1|Name=mRNA_H-elongata_contig61658.13718.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig61658:243..1079- (Himanthalia elongata Himel1 dioecious)back to top |