mRNA_H-elongata_contig61549.13707.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A6H5JF92_9PHAE (6-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF92_9PHAE) HSP 1 Score: 268 bits (684), Expect = 5.490e-84 Identity = 140/204 (68.63%), Postives = 158/204 (77.45%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAWEKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDG----TAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKV-VNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVKCSPEIAALVTEC 597
CVPLDH DSN+KAWE LFS+SGIPAE +VAV+TDL+PE AAADY+AKL+ F TA P FD ALLG GPDGHTCSLFPSHPLLEERSK VA+IEDSPKPPPQRVT T+PV+NNSRNVMFIGTG GKASLLPQL+ V +G + SAG SPYPAARV+VA+G+ L WCVD AAA +C PEI AL T+C
Sbjct: 72 CVPLDHTDSNYKAWEGLFSSSGIPAENVVAVRTDLTPEEAAADYQAKLRHHFPXXXXXXXXXXXXESLPTASPPPSFDAALLGVGPDGHTCSLFPSHPLLEERSKWVAYIEDSPKPPPQRVTLTYPVLNNSRNVMFIGTGEGKASLLPQLLSVGTDGALESAGESSPYPAARVKVAEGKALAWCVDEAAASQCPPEIVALATKC 275
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A3F2RX10_9STRA (6-phosphogluconolactonase n=22 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RX10_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.730e-44 Identity = 96/192 (50.00%), Postives = 114/192 (59.38%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAWEK-LFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVKCSPE 573
CVPLDH+DSN+KA + LF +P I + LSP A DY KL E + G D LP FD+ LLG GPDGHTCSLFP HPLLEE++ VA IEDSPKPPPQR+T T+PVVNN+ NV F+ TG GKA L+P +V V P PAA V+ DG + W +D AA K S E
Sbjct: 96 CVPLDHDDSNYKACKAALFDFIPVPTSQIYTIDASLSPADMAVDYTKKLAEIW---------GSD-----LPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPPQRITLTYPVVNNAANVAFVATGAGKAELIPHMVGVEKRT-------PPLPAANVKPTDG-VVYWFIDEDAAAKLSDE 265
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A3M6VDW2_9STRA (6-phosphogluconolactonase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDW2_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.310e-43 Identity = 92/195 (47.18%), Postives = 116/195 (59.49%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAW-EKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPC---FDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVKCSPE 573
CV LDH DSN+KA E LF IP I ++ L+P++ A DY KL E + G T +LP FD+ LLG GPDGHTCSLFP HPLLEE++ VA IEDSPKPP QR+T T+PVVNN+ NV F+ TG GKA L+P +V + P PAA +++ DG E+ W +D AA S +
Sbjct: 72 CVSLDHNDSNYKACKEALFDFISIPESQIFSIDASLTPKSMAVDYTKKLAEVW--------GNDVSTPLVLPVLPRFDLILLGMGPDGHTCSLFPGHPLLEEKTLFVASIEDSPKPPSQRITLTYPVVNNAANVAFVATGAGKAKLIPHMVGIEKRT-------PPLPAANIKLIDG-EIYWFIDEDAAAMLSED 250
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A5D6XPB3_9STRA (6-phosphogluconolactonase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPB3_9STRA) HSP 1 Score: 157 bits (397), Expect = 8.820e-42 Identity = 92/188 (48.94%), Postives = 114/188 (60.64%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAW-EKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVK 561
CVPL+H+DSN+KA E LF IPA I + LSPEAAA DY AKL + GD LP FD+ LLG GPDGHTCSLFP H LL+ER+ VA I+DSPKPPPQR+T T+PVVNN+ ++ F+ TG GKA L+P ++ + P PAA V+ G + W +D AA K
Sbjct: 72 CVPLEHDDSNYKACKEALFDHVAIPAAQIHTIDASLSPEAAAVDYTAKLATIW----------GD----ELPRFDLILLGMGPDGHTCSLFPGHKLLQERTLFVASIDDSPKPPPQRITLTYPVVNNAEHIAFVATGAGKAELMPHMLGRETRE-------PPLPAADVKPTHG-VVYWYIDQDAAAK 237
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: K3WB39_GLOUD (6-phosphogluconolactonase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB39_GLOUD) HSP 1 Score: 156 bits (395), Expect = 1.730e-41 Identity = 94/188 (50.00%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAW-EKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVK 561
CVPLD +DSN+KA E LF IPA I + LSPEAAA DY AKL + G E LP FD+ LLG GPDGHTCSLFP H LL+E VA IEDSPKPPPQR+T T+PVVNN+ +V F+ TG GKA L+P +V P PAA V+ +G + W +D AA K
Sbjct: 72 CVPLDSDDSNYKACKEALFDHIAIPAAQIYTIDASLSPEAAAVDYTAKLASVW---GSE-----------LPRFDLILLGMGPDGHTCSLFPGHKLLKEDKLFVASIEDSPKPPPQRITLTYPVVNNAEHVAFVATGAGKADLMPHMVGTEKRD-------PPLPAAAVKPKNGT-VYWYIDQDAASK 237
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: H2UJ91_TAKRU (6-phosphogluconolactonase n=2 Tax=Takifugu TaxID=31032 RepID=H2UJ91_TAKRU) HSP 1 Score: 157 bits (396), Expect = 1.880e-41 Identity = 96/192 (50.00%), Postives = 115/192 (59.90%), Query Frame = 1
Query: 4 VPLDHEDSNHKAWEK-LFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAAVKCSPEI 576
VP D DS + ++ LFS IPA GI+ + + L A DYE KLKEAF G G LP FD+ LLG GPDGHTCSLFP HPLLEE +K+VA I DSPKPPP RVT TFPVVN++R V F+ TG KA P L +V+ GK S +PAARV +G EL W VD AA + ++
Sbjct: 75 VPFDDPDSTYGLYKSHLFSKVNIPASGILTIDSSLPVTDCAEDYERKLKEAFPGDG-------------LPVFDLLLLGMGPDGHTCSLFPDHPLLEETNKIVAPISDSPKPPPLRVTMTFPVVNSARCVAFVSTGGSKA---PVLKEVLEGK-----GDSLFPAARVLPTNG-ELFWLVDDPAAASLTIQV 244
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A8K1FBT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBT4_PYTOL) HSP 1 Score: 155 bits (393), Expect = 1.150e-40 Identity = 91/182 (50.00%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAW-EKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVD 543
CVPLDH+DSN KA E LF IPA+ I + LSPE AA DY AKL + G E LP FD+ LLG GPDGHTCSLFP HPLL+E VA IEDSPKPPPQR+T T+PVVNN+ +V FI TG+ KA L+ ++ + + P PAA V+ GR + W +D
Sbjct: 107 CVPLDHDDSNFKACKEALFDHVPIPADQIYTLDASLSPEQAAVDYTAKLATIW---GSE-----------LPRFDLLLLGMGPDGHTCSLFPGHPLLDEHKLFVASIEDSPKPPPQRITLTYPVVNNAAHVAFIATGSSKAPLMAHMLGLEQRE-------PPLPAALVQPPQGR-VTWYID 266
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: A0A2D4CA35_PYTIN (6-phosphogluconolactonase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA35_PYTIN) HSP 1 Score: 154 bits (390), Expect = 1.710e-40 Identity = 92/186 (49.46%), Postives = 112/186 (60.22%), Query Frame = 1
Query: 1 CVPLDHEDSNHKAW-EKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAA 555
CVPLDH+DSN+KA E LF IPA I + LSPEAAAADY KL + G E LP FD+ LLG GPDGHTCSLFP HPLL E+ VA IEDSPKPPPQR+T T+PVVNN+ +V F+ TG KA L+ ++ + + A PAA V ++G + W +D AA
Sbjct: 88 CVPLDHDDSNYKACKEALFDHVSIPASQIYTIDASLSPEAAAADYTTKLASVW---GAE-----------LPRFDLLLLGMGPDGHTCSLFPGHPLLNEQRLFVAAIEDSPKPPPQRITLTYPVVNNAAHVAFVATGASKAPLMAHMLGLERREPA-------LPAAAVSPSNG-VVAWYIDRDAA 251
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: UPI0003292DD8 (6-phosphogluconolactonase n=1 Tax=Dasypus novemcinctus TaxID=9361 RepID=UPI0003292DD8) HSP 1 Score: 152 bits (384), Expect = 1.150e-39 Identity = 87/185 (47.03%), Postives = 112/185 (60.54%), Query Frame = 1
Query: 4 VPLDHEDSNHKAWEK-LFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAA 555
VP +H +S + + L S IP + ++A+ L E AA DY KL+EAF G V P FD+ +LG GPDGHTCSLFP HPLL+ER K+VA I DSPKPPPQRVTFT PV+N +R V+F+ TG GKA +L ++++ +P PAARV+ GR L W +D AAA
Sbjct: 81 VPFEHAESTYGLYRTHLLSRLPIPEKQVIAINPALPVEEAAEDYARKLREAFPGDAV-------------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTFTLPVLNAARTVIFVATGEGKAPVLKRILESQEE--------NPLPAARVQPRSGR-LCWLLDEAAA 243
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Match: Q5ZJY1_CHICK (6-phosphogluconolactonase n=1 Tax=Gallus gallus TaxID=9031 RepID=Q5ZJY1_CHICK) HSP 1 Score: 152 bits (383), Expect = 1.360e-39 Identity = 88/185 (47.57%), Postives = 115/185 (62.16%), Query Frame = 1
Query: 4 VPLDHEDSNHKAWE-KLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEAFLGTGVEEGGGGDGTAFLLPCFDVALLGFGPDGHTCSLFPSHPLLEERSKLVAHIEDSPKPPPQRVTFTFPVVNNSRNVMFIGTGNGKASLLPQLVKVVNGKIASAGALSPYPAARVEVADGRELLWCVDAAAA 555
VP +H +S A+ +L PA ++AV LSP AAAADY +L+EAF G V P FD+ LLG GPDGHTCSLFP+HPLL+E+ K+VA I DSPKPPPQR+T T PV+N +R V+F+ TG GKA++L ++++ +P PAARV G +LLW +D AAA
Sbjct: 75 VPPEHPESTFGAYSAQLLPWLPAPAPTVLAVAPGLSPNAAAADYAERLREAFQGDAV-------------PVFDLLLLGVGPDGHTCSLFPNHPLLQEKEKIVAAITDSPKPPPQRITLTLPVLNAARTVVFVATGEGKAAVLKRILE--------GNEENPLPAARVRPHTG-QLLWFLDEAAA 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61549.13707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61549.13707.1 >prot_H-elongata_contig61549.13707.1 ID=prot_H-elongata_contig61549.13707.1|Name=mRNA_H-elongata_contig61549.13707.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp CVPLDHEDSNHKAWEKLFSASGIPAEGIVAVKTDLSPEAAAADYEAKLKEback to top mRNA from alignment at H-elongata_contig61549:332..3571- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61549.13707.1 ID=mRNA_H-elongata_contig61549.13707.1|Name=mRNA_H-elongata_contig61549.13707.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3240bp|location=Sequence derived from alignment at H-elongata_contig61549:332..3571- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61549:332..3571- >mRNA_H-elongata_contig61549.13707.1 ID=mRNA_H-elongata_contig61549.13707.1|Name=mRNA_H-elongata_contig61549.13707.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig61549:332..3571- (Himanthalia elongata Himel1 dioecious)back to top |