mRNA_H-elongata_contig6135.13688.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6135.13688.1
Unique NamemRNA_H-elongata_contig6135.13688.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6135.13688.1 vs. uniprot
Match: D7FVI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI5_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 3.080e-121
Identity = 201/325 (61.85%), Postives = 244/325 (75.08%), Query Frame = 1 
Query:  436 GTTRLEGLSADEVEERLIAAGVLHRDGAV--FDADSLSDEGVYNTVDVPDGYEACRILVDSLGFEKAEIDYLRNRYAPLRGEPWYRREPTPG-SKVGKKVLDVFFLEETLPELLELLLGNE-ENDGVGLSAEQVRGMILRTPAVAGVEALDAGDVVSYLRDELGLNEAGQLASALAGCPPILMYNAQSNLQKK-----------VQYYVDALSWTIEDIRFLLAEYPNLLSIKMENDVIEVVEYLRYEIGLQPAMVRDMIRKHPQILEVRPKRLRAVVKYLWKVLEIPWNDVVDILSQNPRMCSLEAEANLAPLRHFFERELFVE 1365
            G   LEGLSADEVE+RLIAAG+L  DGA   F+ D     GVYN ++V DG EAC+IL + LGF++  I +LR++Y PLRGE WYRREP  G SK GKK LDV+F+EETLP+LL+LLLG E E  GVGL  +QVR M+  TP++ G++  DA DV  YLR ELGL+  GQLASALAGCPP+LMY+   NL+ K           V YY ++L+WT ED+  +LAEYPNLLSIKMENDVIEV++YLR E+GLQP  V  M+R+ PQ+LEVRPKRL+AVV+Y WKVLEIP + +  +LSQ+PR C LEAEANLAPLR FFERELFVE
Sbjct:  149 GVGSLEGLSADEVEQRLIAAGILRGDGAEIDFEEDDGGGAGVYNEIEVSDGEEACQILEERLGFDEEGIAHLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGEGGGVGLDRKQVREMLTTTPSLVGMDVSDAKDVAGYLRSELGLSGKGQLASALAGCPPMLMYHTWDNLRMKYDNNDDGDDDQVSYYRESLAWTNEDVAAMLAEYPNLLSIKMENDVIEVIDYLRTEVGLQPLTVSGMVREFPQVLEVRPKRLKAVVRYFWKVLEIPRSGIAVLLSQHPRTCCLEAEANLAPLRQFFERELFVE 473
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BLAST of mRNA_H-elongata_contig6135.13688.1 vs. uniprot
Match: A0A6H5JYV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV1_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 6.570e-102
Identity = 204/400 (51.00%), Postives = 237/400 (59.25%), Query Frame = 1 
Query:  448 LEGLSADEVEERLIAAGVLHRDGAV--FDADSLSDEGVYNTVDVPDGYEACRILVDSLGFEKAEIDYLRNRYAPLRGEPWYRREPTPG-SKVGKKVLDVFFLEETLPELLELLLGNE-ENDGVGLSAEQVRGMILRTPAVAGVEALDAGDVVSYLRDELGLNEAGQLASALAGCPPILMYNAQSNLQKKVQYYVDALSWTIEDIRFLLAEYPNLLSIKMENDVIEVVEYLRYEIGLQPAMVRDMIRKHPQILEVRPKRLRAVVKY------------------LWKVLEIPWNDVVDILSQNPRMCSLEAEANLAPLRHFFERELFVEDTARIGRLVCKFPRLLFQDVETQLTPRAEEFREAMGFVGVEPLPRRVRHRPKLDS------CRVGDVGFDYG 1563
            LEGLSADEVE RLIAAG+L  DGA   FD D   + GVYN ++V DG EACRIL + LGF++  I YLR++Y PLRGE WYRREP  G SK GKK LDV+F+EETLP+LL+LLLG E E  G+GL  +Q RG     PA +       GDV                                      V YY +AL+WT ED+  +LAEYPNLLSIKMENDVIEV++                        EVRPKRL+AVV+                   L  VLEIP + +  +LSQ+PR C LEAEANLAPLR FFERELFVEDT+RIG LV KFPRLLFQDV+TQL PRAEEFR+AMG  G+EPLP RVR RPK          R  + GF  G
Sbjct:  229 LEGLSADEVERRLIAAGILRGDGAEIDFDEDDDGEAGVYNEIEVSDGEEACRILEERLGFDEEGIGYLRSKYPPLRGELWYRREPASGGSKTGKKFLDVYFVEETLPDLLDLLLGEEGEGGGIGLDRKQARG-----PADSSHSEQFWGDV-----------------------------------DADVSYYREALAWTSEDVAAMLAEYPNLLSIKMENDVIEVIDXXXXXXXXXXXXXXXXXXXXXXXXEVRPKRLKAVVRKKGTELELQAFESKEVLGTLSSVLEIPRSGIAVLLSQHPRACCLEAEANLAPLRQFFERELFVEDTSRIGHLVYKFPRLLFQDVDTQLVPRAEEFRKAMGLEGLEPLPPRVRLRPKRSKFSGAGRARGANSGFREG 588
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BLAST of mRNA_H-elongata_contig6135.13688.1 vs. uniprot
Match: A0A835YN67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN67_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.230e-49
Identity = 133/410 (32.44%), Postives = 197/410 (48.05%), Query Frame = 1 
Query:  475 EERLIAAGVLHRDGAVFDADSLSDEGVYNTVDVPDGYEACRILVDSLGFEKAEIDYLRNRYAPLRGEPWYRREPTPGSKVGKKVLDVFFLEETLPELLELLLGNEENDGVGLSAEQVRGMILRTPAVAGVEALDAGDVVSYLRDELGLNEAGQLASALAGCPPILMYNAQSNLQKKVQYYVDALSWTIEDIRFLLAEYPNLLSIKMENDVIEVVEYLRY--EIGLQPAMVRDMIRKHPQIL-EVRPKRLRAVVKYLWK------------------------------------VLEIPWNDVVDILSQNPRMCSLEAEANLAPLRHFFERELFVEDTARIGRLVCKFPRLLFQDVETQLTPRAEEFREAMGFVGVEPLPRRVRHRPKLDSCRVGDVGFDYGSRGRTSAS 1587
            EE LIA  V            L D       D   G EA R L++ +G   A +  L  R+APLRGE WYRR      + GKKVLDV+FLE+TLP+L+ELL   EE   +G S E++       P++ G EA +    + Y+R E    E G+L  AL+ CP +L+Y+A++NL+ K  Y    L  T   +R L+ +YP +  +    +    +  L    + G+   M   ++   P+++ E + KR++A++ YL K                                    VL++       ++  +PR+  +EAE +LAPLRHFFE +L + DT RIG +V K P++LF D+ET+L P+A + R  +G       PR    RP     R        G R  TSA+
Sbjct:   38 EEELIAEDV-----------ELIDAEAGELADFDGGAEAQRFLIEDVGLAPAAVAALAERFAPLRGEMWYRR------RNGKKVLDVYFLEDTLPDLVELLEAPEE---LGWSQEEMAAAFAVVPSLLGREAAEVAASLRYVR-EXXXXEGGELRGALSACPSLLLYDARTNLRAKHAYLTRHLGLTPAQLRELMLKYPRMFDVAFTGEGKSSIASLDVLLDSGMTTHMACQLVVAEPELVAEAKGKRVKALMHYLQKWRRLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKLEPEVATRLVCSHPRLLGMEAEKDLAPLRHFFEYDLCITDTRRIGSIVAKLPQILFMDLETELRPKAADIRAKLGIPDDAAPPRPRAPRPTRAEQRA------MGPRRPTSAA 420
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BLAST of mRNA_H-elongata_contig6135.13688.1 vs. uniprot
Match: A0A7S1FZA0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZA0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.820e-7
Identity = 39/172 (22.67%), Postives = 84/172 (48.84%), Query Frame = 1 
Query:  973 YNAQSNLQKKVQYYVDALSWTIEDIRFLLAEYPNLLSIKMENDVIEVVEYLRYEIGLQPAMVRDMIRKHPQILEVRPKRLRAVVKYLWKVLEIPWNDVVDILSQNPRMCSLEAEANLAPLRHFFERELFVEDTARIGRLVCKFPRLLFQDVETQLTPRAEEFREAMGFVGVE 1488
            Y+   N+ + +Q  V       ED   ++  YP+ L +     V+ V+ +L +E+GL  + +R +++  P +L +    ++  +++L   L I  +++  I+   P + +L+ E  + P+  F  + + +E+   +GR V + P +L   VE +L P+     +  G+   E
Sbjct:  455 YSKMGNVAQTLQKVVSQ-----EDFHKIIVSYPDALMLDPSTQVLPVINFLHFEVGLVASDIRRVLQSFPTVLGIPVLNMKERIQFL-DSLGIHGDNLCKIIRAFPHIMTLDVETRMMPVVEFL-KSIGIEN---VGRFVSRLPPVLGYSVENELLPKWTYLTKTCGYANFE 616
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6135.13688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVI5_ECTSI3.080e-12161.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYV1_9PHAE6.570e-10251.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YN67_9STRA1.230e-4932.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1FZA0_9STRA4.820e-722.67Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6135contigH-elongata_contig6135:2607..8821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.1
Seed ortholog evalue1.2e-07
Seed eggNOG ortholog2850.Phatr43940
KEGG rclassRC00055,RC00523
KEGG koko:K01883,ko:K15032
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
EggNOG free text desc.mTERF
EggNOG OGs2XB96@2836,KOG1267@1,KOG1267@2759
EC6.1.1.16
COG Functional cat.K
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Exons10
Model size2568
Cds size1719
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6135.13688.1prot_H-elongata_contig6135.13688.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6135 2622..7987 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930990.261666-UTR-H-elongata_contig6135:2606..26211622930990.261666-UTR-H-elongata_contig6135:2606..2621Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6135 2607..2621 +
1691679652.9150019-UTR-H-elongata_contig6135:2606..26211691679652.9150019-UTR-H-elongata_contig6135:2606..2621Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6135 2607..2621 +
1622930990.4299307-UTR-H-elongata_contig6135:7987..88211622930990.4299307-UTR-H-elongata_contig6135:7987..8821Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6135 7988..8821 +
1691679653.060292-UTR-H-elongata_contig6135:7987..88211691679653.060292-UTR-H-elongata_contig6135:7987..8821Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6135 7988..8821 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930990.2762554-CDS-H-elongata_contig6135:2621..26391622930990.2762554-CDS-H-elongata_contig6135:2621..2639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 2622..2639 +
1691679652.941135-CDS-H-elongata_contig6135:2621..26391691679652.941135-CDS-H-elongata_contig6135:2621..2639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 2622..2639 +
1622930990.291257-CDS-H-elongata_contig6135:2949..33871622930990.291257-CDS-H-elongata_contig6135:2949..3387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 2950..3387 +
1691679652.9562347-CDS-H-elongata_contig6135:2949..33871691679652.9562347-CDS-H-elongata_contig6135:2949..3387Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 2950..3387 +
1622930990.3083289-CDS-H-elongata_contig6135:3722..38781622930990.3083289-CDS-H-elongata_contig6135:3722..3878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 3723..3878 +
1691679652.968367-CDS-H-elongata_contig6135:3722..38781691679652.968367-CDS-H-elongata_contig6135:3722..3878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 3723..3878 +
1622930990.3309867-CDS-H-elongata_contig6135:4616..48111622930990.3309867-CDS-H-elongata_contig6135:4616..4811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 4617..4811 +
1691679652.977599-CDS-H-elongata_contig6135:4616..48111691679652.977599-CDS-H-elongata_contig6135:4616..4811Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 4617..4811 +
1622930990.349256-CDS-H-elongata_contig6135:5086..52661622930990.349256-CDS-H-elongata_contig6135:5086..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 5087..5266 +
1691679652.9873364-CDS-H-elongata_contig6135:5086..52661691679652.9873364-CDS-H-elongata_contig6135:5086..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 5087..5266 +
1622930990.3628147-CDS-H-elongata_contig6135:5742..58671622930990.3628147-CDS-H-elongata_contig6135:5742..5867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 5743..5867 +
1691679652.9972312-CDS-H-elongata_contig6135:5742..58671691679652.9972312-CDS-H-elongata_contig6135:5742..5867Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 5743..5867 +
1622930990.3763008-CDS-H-elongata_contig6135:6420..65321622930990.3763008-CDS-H-elongata_contig6135:6420..6532Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 6421..6532 +
1691679653.0071328-CDS-H-elongata_contig6135:6420..65321691679653.0071328-CDS-H-elongata_contig6135:6420..6532Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 6421..6532 +
1622930990.3891344-CDS-H-elongata_contig6135:6889..70151622930990.3891344-CDS-H-elongata_contig6135:6889..7015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 6890..7015 +
1691679653.0168705-CDS-H-elongata_contig6135:6889..70151691679653.0168705-CDS-H-elongata_contig6135:6889..7015Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 6890..7015 +
1622930990.4009793-CDS-H-elongata_contig6135:7313..74121622930990.4009793-CDS-H-elongata_contig6135:7313..7412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 7314..7412 +
1691679653.0264602-CDS-H-elongata_contig6135:7313..74121691679653.0264602-CDS-H-elongata_contig6135:7313..7412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 7314..7412 +
1622930990.4142292-CDS-H-elongata_contig6135:7717..79871622930990.4142292-CDS-H-elongata_contig6135:7717..7987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 7718..7987 +
1691679653.0451224-CDS-H-elongata_contig6135:7717..79871691679653.0451224-CDS-H-elongata_contig6135:7717..7987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6135 7718..7987 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6135.13688.1

>prot_H-elongata_contig6135.13688.1 ID=prot_H-elongata_contig6135.13688.1|Name=mRNA_H-elongata_contig6135.13688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=573bp
MAFTFEADRIDEECAYKRDSANRFSAEGPFRVHNGNKERGDGDKSVEARD
LGVTSDGVTIEAPPIPPHTQPRGECTGTGMESSVSENQELADYYFSRVSA
TNESTQERGYSESPARKDSDADISRVAVNSGLTEMAARGQGTTRLEGLSA
DEVEERLIAAGVLHRDGAVFDADSLSDEGVYNTVDVPDGYEACRILVDSL
GFEKAEIDYLRNRYAPLRGEPWYRREPTPGSKVGKKVLDVFFLEETLPEL
LELLLGNEENDGVGLSAEQVRGMILRTPAVAGVEALDAGDVVSYLRDELG
LNEAGQLASALAGCPPILMYNAQSNLQKKVQYYVDALSWTIEDIRFLLAE
YPNLLSIKMENDVIEVVEYLRYEIGLQPAMVRDMIRKHPQILEVRPKRLR
AVVKYLWKVLEIPWNDVVDILSQNPRMCSLEAEANLAPLRHFFERELFVE
DTARIGRLVCKFPRLLFQDVETQLTPRAEEFREAMGFVGVEPLPRRVRHR
PKLDSCRVGDVGFDYGSRGRTSASETKTKGQHKGGFVEGKDGSRIGVDYR
GQSDGIRRRSRGRGRGRGGRSR*
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mRNA from alignment at H-elongata_contig6135:2607..8821+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6135.13688.1 ID=mRNA_H-elongata_contig6135.13688.1|Name=mRNA_H-elongata_contig6135.13688.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6215bp|location=Sequence derived from alignment at H-elongata_contig6135:2607..8821+ (Himanthalia elongata Himel1 dioecious)
GGGTTGACTCACTTGATGGCCTTCACGTTTGAGGTGAGACTCAAGCATTA
AAAGAGTATGTCTTAGTTTGGCTGTTAACCTGTCTTATCTTTAGCAAAAC
CCCGATTGATGAGAGAGTCTAAGACTTTTATCCCTACCTAGTTCAGCCCT
AGAGTTAAAACCTCCCAAACCCCCATATTTGCTGTTCCCACGCATCTATC
ACCCCTTTACTACATACGATATCTTTATCTCCCTCCAGCCTGCTTGTAAT
ACGCCTTCTAACGCTGCGATATGTTTTTTTCTCTGGCATAGATACTCATG
TGGCTCCTTAATTCCCTATTCCGATTGCGACATTCTTTGATAGGCAGACA
GGATAGACGAAGAGTGTGCGTATAAACGAGACTCTGCCAACCGTTTTTCT
GCCGAAGGACCTTTTAGAGTCCACAACGGAAATAAGGAAAGAGGGGATGG
GGACAAGTCAGTGGAAGCGAGGGATTTGGGTGTCACCTCGGATGGTGTCA
CTATCGAAGCCCCACCGATTCCTCCTCATACGCAGCCCCGCGGTGAATGT
ACTGGCACGGGAATGGAGTCGTCCGTTTCAGAGAATCAGGAACTTGCCGA
CTACTATTTCTCCAGGGTCTCGGCGACTAATGAGTCGACCCAAGAACGGG
GTTACTCCGAATCCCCAGCGCGTAAAGATTCCGATGCTGACATTAGTCGT
GTTGCTGTGAATTCGGGGCTCACAGAGATGGCAGCGAGGGGGCAGGGCAC
AACGCGGCTCGAAGGACTCTCGGCGGACGAGGTGAGTGCTGAGGTGATGC
CTATCGAAAGATGGTCTGGAACTTCGAACGTTAGCCGGGCGGGCATAGCC
TGCTAGCCAGCGGCTCTGATTTGTTCAGAGCGCTGAAAAGGGGGGTGAGT
ACTAATATTTGCGTAGCTCAACCGGTTCGAAGGCGCCAAACGTTCAGCAC
CGACTGGACGCCTAGGTCCTCATCATCCCTCCCAAAACGCGCAAACAAAT
ACCCGTCCGCACAATAGTTGTAGCAGCACATCGCCCACTGCTTACATCGA
CGCTCTATCGAACACCCCTTCTCTGGCCGGCGTGCTGTTCCACGCGTTGT
GTGTATTGCTCAGTAGGTTGAAGAGAGGCTCATCGCCGCCGGCGTACTTC
ACAGAGACGGCGCCGTGTTTGATGCAGACAGCTTGAGCGACGAGGGCGTG
TACAACACGGTGGATGTTCCCGATGGTTATGAGGCGTGTCGAATCCTAGT
CGACTCTCTTGGCTTCGAAAAGGTTATAGTTTTAGAGTCAGTGCCTTTTC
ACGCTCCTGTAGCGCTTGAAGTGTGAGTATAATGGGTCTGATATTTTAGC
GAGAATTCGCAATGTTCGCATTTTTCCGTGAAAGCTAAATTTAAATCGAA
AACGATTTTGGAGTTGCTGTCGGAGGGATACTGACGTGAACCGAATAAAC
AGACTAAATCTGCTAGAGACGTAAACAAGCTATTAGCACCAATCCATCCT
TTACGAACCAGGGCAAGAGGTAGCAAGAGGGGGATACGAGCGCAATAAGA
TTCCTCGAGCATTCTTGCGTGGTGCGGTACACGCGTGGGACGTTTGTGGA
TTGAAATTCCGCGTGAAAGGATTGGCGCCATTGTCTCCTCGATTATGTGT
TCGTAACGACTAATTGAAGACATATATTGTGGAGCATAGGAGTGTATTTC
TTCTGTTTTTGCGATGCACGGGCTCCCAATTTTCGTCGGCTGTCCTCGTG
TTCCTTTGTCGGATACTTTTTCAAAAAATTAGTCTTCTATGTGTGGGGGG
GGTAGGGTGAGACGAGCGGGGATGGAGCGGTGCCAATCATTCCATCGCGG
AAGCAGTCGACGCTCCTTCGATCAGCATACTAAATTGACCGATATGAACC
TGAGAGCCCACACTGTATCCAGTTGCTTGCTTCCCCCATGAGGTGTTATA
CACCCGTATCGCTTTGTTTATTCGATTATGGCTGTCCCAATCAAACGCGC
TCCAATCCAGGCGGAAATCGACTATCTTCGGAACAGGTACGCCCCGCTGC
GCGGCGAGCCGTGGTACAGACGGGAGCCGACACCGGGATCAAAGGTAGGC
AAAAAAGTTCTGGACGTTTTCTTCCTGGAGGAGACGCTCCCGGAGCTGTT
GGAACTCCTGCTGGGGAACGAAGAGAATGACGGCGTAGGCCTCTCCGCCG
AACAGGTAACACGGAGTGAGTTAAGATTGCGCCAAAACGCGGGATAGACG
GGAAGGGACGCCGAAAGACGGAGTCCAAGTTGACCTCGGTCACATTATGA
TTAATTGTTGAGAGACGAATTAATGACTAGGTTTTGTTTTGAGGGATGGT
TGTGGTGGTAGAAGAATGAGGTGCCGTCGATCGATATAGTCAGCCATAAA
TGGCGCAACCCCCATGGGGTTCTGCCAAAATAAGTACGGCATCTTTGTTT
CAAAGGTTTAAGAACAGACCCTGCCACCAGGTCCGGGGAATGATTTTGCG
GACTCCAGCGGTGGCGGGCGTTGAGGCGCTTGACGCGGGAGACGTTGTGA
GTTACCTTCGTGATGAGCTTGGCCTCAACGAGGCAGGGCAGCTGGCTTCC
GCTCTGGCAGGATGCCCACCGATACTCATGTACAACGCCCAGAGTAACCT
GCAAAAAAAGGCGAGTTGACGTCCCGATATGATTATTTTTGCTGCTTCTA
TCTCGAGGTGCGAAGGCAGGCACAAGAGGACCTGAGGATACCCGTTCCAC
GGAATATCTCAATATTTTGGTCGTTGGTTACTTATTTAAAGTACTAAAAT
AGTGTATAACGCCGTAAATCACCTTACAACCCCTGAGCAGCTAGCGCCGA
TTCCTGATCCGTTGGGACATGTTGCCTAAAGGTCTTTTATAGCTCAAATT
ATATAAACGATGCAGGGGGTTTTTGCAGCTCCATATGTAGTTGGGGTATA
TTCAAATGAGATCGCGCCGTAATCTAGTACGTGAAGTACTGCTTCTTGAC
GTGGCGCAATGCCGTTCCGGGTCGTACTGTTTCAGCCTCTCAGTACCCCC
CTTACCCCTTATCTTTATATTCCTCCAGCGCCCAAGTATTTCGGTGTCAT
TTTTCGTAACTTCCCATGTGGTTGTGCGCGAGACAGGTGCAGTACTACGT
CGACGCGTTGTCCTGGACAATTGAGGACATTCGCTTCTTGCTGGCGGAGT
ATCCGAACCTCCTGTCGATCAAGATGGAAAATGACGTCATTGAAGTCGTC
GAGTACCTAAGGTACTCGCCCTGACTCTCGCGGTGTGGTGTAGCCTACAG
TGGCAGCAGCAAGACCGTCGATCGCCTCTGTAGACTTGTATCGGGTAAAG
GCGCGCACTGGCCTGGGTTCGAGAAGGCGTGGAGCAGGAACAGCTGAGAG
ATGATCAATAGAATGCCTCAGAGCTGTGTTTGGTCTTGGTCACAAAGCGA
GAAAATCCAAGAAACCACGCTCTTTGTGGCGGAACCGAGATTAAGCAGTT
CGTGCCCCCGCTCCATCTGCCAGATACAACACTGGCTCTGATGCAAATTG
ATTATGCTTAGGGGCTCGGATGTGAACACGCGGGGAGCGCACGTGCTGGT
CGAGATGCTCGCGCCCGGGACCAGTCTCGCCTGCTGAGCGTTTTGTTATG
CTTCTCGTACCTACACCTGCGTCAGCTTCATCCTATCTACAGTATCGTGG
ATTAATTGTACTGGCCCATACTTTTTACGTGTTTGCAAAAACCCACTAAA
TTACTCACCTGGAGATTGAACTGGCCCAGTCCCGTCGCTCTCGCCGTTGT
CTAATGCGTGATAGGTATGAAATCGGCCTTCAGCCGGCGATGGTGAGGGA
CATGATTCGGAAGCACCCCCAAATCCTCGAAGTCAGGCCTAAGCGACTCA
GAGCTGTGGTGAAGTACCTCTGGAAGGTAAATAAAATGTCAAGATATTCG
CTTTGTTCTGCGATCTTCTTCACCAGAAATGCGATTCGCCTTCTTCGCTG
ACCTTCTTGCACCTCGCCCATAGAGAGACGACAGCAGCTCGCGCAAAGTG
TTGCTAAGCAGGTCACCGATCACAGCCCTGGATCCCCGATGAATAAGTAT
CGTGTATAATACCGTAAAGAAAAACAATGAGATGTAGAATGTAGCGAGAG
TGCCCGACGTTTCCGTACTGCTTCTAGGGGAGGGGTTTCCGTCGAAATCA
ATAGTACATGCATCTATGATGAGCGCTTCGGTCTAGCACGAATTATCGTG
TAGATGCTTATTTTTTCCTCTCTTCACGGAAAGGTTCTGGAGATCCCGTG
GAACGATGTGGTGGATATCCTAAGCCAAAACCCGAGAATGTGCTCACTTG
AGGCCGAAGCCAACCTGGCGCCCCTTAGGCACTTTTTCGAGCGAGAGCTA
TTTGTCGAGGTACGATGTTCACCAGGAAAATCTGAGTATGAGGTTGTTTC
AAAGCACACCCGCCGTTTCCACGTTTTGCAAGAGCGTGTTCGCTTCTTGC
ACGCACCTAAGGGTACCGTATAAGTGCCGCAAGGGAGCACGAAAACGACG
CGATTGCTTGAACGGAAAGCGATGCGGCTCTAAAAGAATGTGCTGTCCTT
CTCTGGTGGGCGATTGCCCCAGGAGGAAGGTTATTGTTTATAAGGAGTTT
TTGTTGCACCGCTGTCCCCCTCTCCTCTCATTTATTCTGTCGTGGGGTTG
CTCGCAGGACACCGCTCGCATCGGGCGCCTGGTCTGCAAGTTTCCGCGTC
TGCTGTTCCAGGACGTGGAGACCCAGCTTACGCCCCGAGCCGAGGAGTTC
CGAGAGGTGACGGAACGTAGTAATCAACATTACTGTGCGATACCATAAAC
TTCTGCACGTTCTTTTCTTTTTGATGTGGAAACCTCGGCATGACGTTGCT
GTGCTTTATGAACAACGTTTCGCGGTACGTTTCGTGGGGCGACTTGCTTT
TACTGAAACTATCACCGTTTCGGAGAAGCGATATTGGTGGACAGCAGGGT
TTGCATGCTCCGGACGAGAGTCGCGTAAATAGTATTTATTCTCAGCTCCA
AGTCGAGTACCTTCCCACCCTAGGGCTTTCTTTTCCGCGCGCTTTTTCTG
GCGTACCGTAGGCGATGGGCTTTGTAGGTGTGGAACCCCTCCCCCGCCGA
GTACGCCATCGCCCGAAGCTCGATAGCTGCAGGGTTGGTGACGTTGGATT
CGACTACGGCAGCAGAGGTCGCACATCAGCCAGTGAAACCAAAACAAAAG
GGCAACATAAGGGCGGGTTTGTAGAGGGAAAAGACGGCAGCAGGATCGGC
GTGGATTATCGTGGTCAGAGCGATGGCATTCGCAGGAGGAGCAGAGGTAG
GGGACGGGGAAGAGGTGGCCGGAGTAGGTAGTCTTCGTAGTCATGTGATG
TTTTGCGTTAGGCTTCGGCTGACGGGAAAAGGCGTCTTAAGAGCTTCCTT
CGACCGTGGTCACAATTTGAACTATGTAGAGATAATAGAAATGCATTTCT
AAAGCTGAGGATAGTCTTCCGAGGGCTGACTCCGGGTTTCGCATGAGAAT
TTACATCACGGGCAACTCTAGAGCCACGAAAGAAGTTACCGAAGCGGAAG
CCACCGAAGGAATGAGTTTGAAACATCGGTGCCATGTCGAGTTCATTTGA
GACTCGAAAAATAGCGTCGTGTTCAATTGAGACTTGAAAAAAGGCAACAG
CCAGGAAACCTAATACGCAGAAATTGTCGGTTGGGAGTCGCATCTCTAAT
GGCAGGGGGTTTTCACAACGCTGCACCAGACCCAACGTATGACTCGCTGA
ATTCTCATCGAGAAGCACTACTAAGCCTAACCAAGCGACCCGTCTTGTGC
CGTGTCGACACCCGCGGACAGCGTGTAGATGCAGCAGATTACACGGGACC
GACCGCGTATCCTTCTTCTGCCCTCAATCGGCGGTGGCCAAGAAAATACT
GCCGCACGTTTAGAGAATCGTTATCCGCGGTGCAATATCCGAGACGAACC
TTAGAGCCTTGGGACAGTAACTTTCTAAAATCATTGACAACTATACACGT
GCCGAAGGTAACTGGTAATGCATACTTCCTCTGTCCCATAAGGCTGGGCG
TTTATGGGCGTTTGATCGTTTGGGTATGACGGTCTTGATAGTGATCCTTA
TAGTTGAGTTCGTTGAAAAGAAAAAGCGCAGACGATGATGATGGAAAAAT
AAATGAATAAAAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig6135:2607..8821+

>mRNA_H-elongata_contig6135.13688.1 ID=mRNA_H-elongata_contig6135.13688.1|Name=mRNA_H-elongata_contig6135.13688.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3438bp|location=Sequence derived from alignment at H-elongata_contig6135:2607..8821+ (Himanthalia elongata Himel1 dioecious)
ATGGCCTTCACGTTTGAGATGGCCTTCACGTTTGAGGCAGACAGGATAGA
CGAAGAGTGTGCGTATAAACGAGACTCTGCCAACCGTTTTTCTGCCGAAG
GACCTTTTAGAGTCCACAACGGAAATAAGGAAAGAGGGGATGGGGACAAG
TCAGTGGAAGCGAGGGATTTGGGTGTCACCTCGGATGGTGTCACTATCGA
AGCCCCACCGATTCCTCCTCATACGCAGCCCCGCGGTGAATGTACTGGCA
CGGGAATGGAGTCGTCCGTTTCAGAGAATCAGGAACTTGCCGACTACTAT
TTCTCCAGGGTCTCGGCGACTAATGAGTCGACCCAAGAACGGGGTTACTC
CGAATCCCCAGCGCGTAAAGATTCCGATGCTGACATTAGTCGTGTTGCTG
TGAATTCGGGGCTCACAGAGATGGCAGCGAGGGGGCAGGGCACAACGCGG
CTCGAAGGACTCTCGGCGGACGAGGCAGACAGGATAGACGAAGAGTGTGC
GTATAAACGAGACTCTGCCAACCGTTTTTCTGCCGAAGGACCTTTTAGAG
TCCACAACGGAAATAAGGAAAGAGGGGATGGGGACAAGTCAGTGGAAGCG
AGGGATTTGGGTGTCACCTCGGATGGTGTCACTATCGAAGCCCCACCGAT
TCCTCCTCATACGCAGCCCCGCGGTGAATGTACTGGCACGGGAATGGAGT
CGTCCGTTTCAGAGAATCAGGAACTTGCCGACTACTATTTCTCCAGGGTC
TCGGCGACTAATGAGTCGACCCAAGAACGGGGTTACTCCGAATCCCCAGC
GCGTAAAGATTCCGATGCTGACATTAGTCGTGTTGCTGTGAATTCGGGGC
TCACAGAGATGGCAGCGAGGGGGCAGGGCACAACGCGGCTCGAAGGACTC
TCGGCGGACGAGGTTGAAGAGAGGCTCATCGCCGCCGGCGTACTTCACAG
AGACGGCGCCGTGTTTGATGCAGACAGCTTGAGCGACGAGGGCGTGTACA
ACACGGTGGATGTTCCCGATGGTTATGAGGCGTGTCGAATCCTAGTCGAC
TCTCTTGGCTTCGAAAAGGTTGAAGAGAGGCTCATCGCCGCCGGCGTACT
TCACAGAGACGGCGCCGTGTTTGATGCAGACAGCTTGAGCGACGAGGGCG
TGTACAACACGGTGGATGTTCCCGATGGTTATGAGGCGTGTCGAATCCTA
GTCGACTCTCTTGGCTTCGAAAAGGCGGAAATCGACTATCTTCGGAACAG
GTACGCCCCGCTGCGCGGCGAGCCGTGGTACAGACGGGAGCCGACACCGG
GATCAAAGGTAGGCAAAAAAGTTCTGGACGTTTTCTTCCTGGAGGAGACG
CTCCCGGAGCTGTTGGAACTCCTGCTGGGGAACGAAGAGAATGACGGCGT
AGGCCTCTCCGCCGAACAGGCGGAAATCGACTATCTTCGGAACAGGTACG
CCCCGCTGCGCGGCGAGCCGTGGTACAGACGGGAGCCGACACCGGGATCA
AAGGTAGGCAAAAAAGTTCTGGACGTTTTCTTCCTGGAGGAGACGCTCCC
GGAGCTGTTGGAACTCCTGCTGGGGAACGAAGAGAATGACGGCGTAGGCC
TCTCCGCCGAACAGGTCCGGGGAATGATTTTGCGGACTCCAGCGGTGGCG
GGCGTTGAGGCGCTTGACGCGGGAGACGTTGTGAGTTACCTTCGTGATGA
GCTTGGCCTCAACGAGGCAGGGCAGCTGGCTTCCGCTCTGGCAGGATGCC
CACCGATACTCATGTACAACGCCCAGAGTAACCTGCAAAAAAAGGTCCGG
GGAATGATTTTGCGGACTCCAGCGGTGGCGGGCGTTGAGGCGCTTGACGC
GGGAGACGTTGTGAGTTACCTTCGTGATGAGCTTGGCCTCAACGAGGCAG
GGCAGCTGGCTTCCGCTCTGGCAGGATGCCCACCGATACTCATGTACAAC
GCCCAGAGTAACCTGCAAAAAAAGGTGCAGTACTACGTCGACGCGTTGTC
CTGGACAATTGAGGACATTCGCTTCTTGCTGGCGGAGTATCCGAACCTCC
TGTCGATCAAGATGGAAAATGACGTCATTGAAGTCGTCGAGTACCTAAGG
TGCAGTACTACGTCGACGCGTTGTCCTGGACAATTGAGGACATTCGCTTC
TTGCTGGCGGAGTATCCGAACCTCCTGTCGATCAAGATGGAAAATGACGT
CATTGAAGTCGTCGAGTACCTAAGGTATGAAATCGGCCTTCAGCCGGCGA
TGGTGAGGGACATGATTCGGAAGCACCCCCAAATCCTCGAAGTCAGGCCT
AAGCGACTCAGAGCTGTGGTGAAGTACCTCTGGAAGGTATGAAATCGGCC
TTCAGCCGGCGATGGTGAGGGACATGATTCGGAAGCACCCCCAAATCCTC
GAAGTCAGGCCTAAGCGACTCAGAGCTGTGGTGAAGTACCTCTGGAAGGT
TCTGGAGATCCCGTGGAACGATGTGGTGGATATCCTAAGCCAAAACCCGA
GAATGTGCTCACTTGAGGCCGAAGCCAACCTGGCGCCCCTTAGGCACTTT
TTCGAGCGAGAGCTATTTGTCGAGGTTCTGGAGATCCCGTGGAACGATGT
GGTGGATATCCTAAGCCAAAACCCGAGAATGTGCTCACTTGAGGCCGAAG
CCAACCTGGCGCCCCTTAGGCACTTTTTCGAGCGAGAGCTATTTGTCGAG
GACACCGCTCGCATCGGGCGCCTGGTCTGCAAGTTTCCGCGTCTGCTGTT
CCAGGACGTGGAGACCCAGCTTACGCCCCGAGCCGAGGAGTTCCGAGAGG
ACACCGCTCGCATCGGGCGCCTGGTCTGCAAGTTTCCGCGTCTGCTGTTC
CAGGACGTGGAGACCCAGCTTACGCCCCGAGCCGAGGAGTTCCGAGAGGC
GATGGGCTTTGTAGGTGTGGAACCCCTCCCCCGCCGAGTACGCCATCGCC
CGAAGCTCGATAGCTGCAGGGTTGGTGACGTTGGATTCGACTACGGCAGC
AGAGGTCGCACATCAGCCAGTGAAACCAAAACAAAAGGGCAACATAAGGG
CGGGTTTGTAGAGGGAAAAGACGGCAGCAGGATCGGCGTGGATTATCGTG
GTCAGAGCGATGGCATTCGCAGGAGGAGCAGAGGTAGGGGACGGGGAAGA
GGTGGCCGGAGTAGGTAGGCGATGGGCTTTGTAGGTGTGGAACCCCTCCC
CCGCCGAGTACGCCATCGCCCGAAGCTCGATAGCTGCAGGGTTGGTGACG
TTGGATTCGACTACGGCAGCAGAGGTCGCACATCAGCCAGTGAAACCAAA
ACAAAAGGGCAACATAAGGGCGGGTTTGTAGAGGGAAAAGACGGCAGCAG
GATCGGCGTGGATTATCGTGGTCAGAGCGATGGCATTCGCAGGAGGAGCA
GAGGTAGGGGACGGGGAAGAGGTGGCCGGAGTAGGTAG
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