mRNA_H-elongata_contig5783.13253.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: D7FW72_ECTSI (Arginine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW72_ECTSI) HSP 1 Score: 618 bits (1593), Expect = 6.820e-211 Identity = 337/536 (62.87%), Postives = 396/536 (73.88%), Query Frame = 1
Query: 1 QVLKLLAAKQRFKEVTGTDYSPPHQDKKAKAAPKAGPANTPTSSNPPSYSKIKSANKKAAKKVTGKTAVSPPPAGSRSSLVAAVAATPSPAVKTAV-SSLPSMFLSGDGPGPLKCVNAARFYGVKVEASNTNPAGDLSFASGCVLAAEDSLIFGSNAICRYFSYKG-ASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGDWLLEGDNPSLSDLVVGTTTRAAIARLGDGE-TSSFPKIQAYVKRLEELDAFAQAASGIDKFIKASQPGAILAGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
+V KL+ KQ +KEVTG+DY PP Q+KKAK+ PK A P+SS P +K AAK A SSLPSM+L DGPGPLK + AA+F+GV+VEA++TNPAG+LS ASGC ++ S+IFG+NA+CRYFSYKG +SSP+ AVE+WL+WET LAPAER L + GG P E L AL HLE+ L G WLLEGD PSL+D+VVG T +AAI LG+ E TS+ K+ AY +R+ E+ A QAAS ID F KAS+ ++ AGLQASLLA+FD AMFKAWPLAK GITSS V KC +YK GDFQCNAAM+LFKALKG +GAP +P AA+AIVA++ PL++ SV+P G+INIRLR AFINQ I ++K+GP PP+ K RV+VDFSSPNIAKEMHVGHLRSTIIG+AICRVLEFCGHTVFRHNHVGDWGTQFGMLINYM+EAYPNFLT+PPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDP CKEV
Sbjct: 32 EVAKLMKTKQHYKEVTGSDYVPPPQEKKAKSTPKPQDAVPPSSSGP---------SKTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRSSLPSMYLGSDGPGPLKGLTAAKFFGVEVEAADTNPAGELSSASGCAVSTGTSVIFGANAVCRYFSYKGKSSSPKGPTADPAGAVEEWLDWETGTLAPAERALAAWKEAGGSVPTEALAALKHLEDKLTGTWLLEGDEPSLADVVVGVTAQAAITALGEAEATSTLAKVLAYAQRVGEMPACKQAASTIDTFTKASKGVSLKAGLQASLLAMFDAAMFKAWPLAKSAGITSSSVRKCADYKNGDFQCNAAMALFKALKGGDGAPSSPQAAASAIVASLPVNPLVDTTSVSPQGYINIRLRPAFINQSIAKVIKNGPAPPEVKKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPACKEV 558
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A835ZA36_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA36_9STRA) HSP 1 Score: 295 bits (755), Expect = 8.230e-86 Identity = 185/436 (42.43%), Postives = 237/436 (54.36%), Query Frame = 1
Query: 349 AARFYGVKVEASNTNPAGDLSFASGCVLAAEDS-LIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGD--WLLEGDNPSLSDLVVGTTTRAAIAR------------LGDGETSSFPKIQAYVKRLEELDAFAQAASGIDKFIKASQPGAILAGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEGAPL-NPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVL---VDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
AA G V + ++PA L+FA CVL + S L+FG++A CRYF Y ++ AA E W +++ GG + LA LE L L G S++D + +AA++ + P++ ++ L A + A GL S+ +F A+ KA+P G + + KC YK GDFQCN+ MSL+ LK G + P D A AI+AA+ +PL+E SVA GFIN+RLR FI+ + + + GP PP +R L VDFSSPNIAKEMHVGHLRSTIIGD ICR+LEF GH V R NHVGDWGTQFGMLIN+M+ AYP+FLT PPN+TDLTTFYK AK FDESEEFK+ SR TVV LQSGD C +V
Sbjct: 138 AAALAGAAVAPALSHPAPHLTFAGSCVLVVKKSELVFGTSAACRYFMYTADAAGD-------AAAESATAWA-----------QAQVQGGGGA------LLAALEARLGSQEGGFLAGSAASVADAIAAPAAQAALSADAXXXXXXXXXXXXXXXXXALPQLAGVAEQAAALVAACRGXXXXXXXXXAGSADVAGQGLLGSIRGLFTAAISKAFP---ELGHVEAALGKCAQYKHGDFQCNSPMSLYPLLKARGGGGVAKPHDVARAIIAALPPSPLVESTSVAGPGFINVRLRPTFISDAVRALARDGPAPPPLPANRKLKIAVDFSSPNIAKEMHVGHLRSTIIGDTICRILEFAGHAVLRVNHVGDWGTQFGMLINHMKTAYPDFLTHPPNLTDLTTFYKGAKQAFDESEEFKDVSRKTVVKLQSGDAECLQV 546
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A8K1FGY9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGY9_PYTOL) HSP 1 Score: 284 bits (726), Expect = 4.330e-83 Identity = 175/405 (43.21%), Postives = 243/405 (60.00%), Query Frame = 1
Query: 427 VLAAEDSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGDW----LLEGDNPSLSDLVVGTTTRAAIARL-GDGETSSFPKIQAYVKRLEELDAFAQAASGI-------DKFIKASQPGAILAGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCF--NYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
VL +++IF +NA+CRY A++ SL + AV++WLEWE+ L P +L K + LTA+ +E L G SL+D+V G T R A+ + D +T K + YV++L ++ +F Q A+ + K G + + + +IF+ A+ A+P G + + V + N KFGD+QCN+AM++F ALKGT A +P D A AI+ A+ L+E++SVA GFIN L F+N + N+++ G P KP+R++VDFSSPNIAK+MHVGHLRSTIIGD +CR+LEF GH V R NHVGDWGTQFGMLI ++ EAYP + TE PN+TDLT YKAAK RFD EEF + S++ VV LQSGDP ++V
Sbjct: 59 VLPGAENVIFSANAVCRYV----AAANDSL-QYEDLAVDEWLEWESHVLTPF--VLKGKKAADKTGLAAELTAILEAKEEARAKMDALQFLFGSELSLADIVAGVTLREALELIPADQDTEILKKFRNYVEQLFKVGSFVQGAALLASGGKPESKLDTEVLKGNTSHNVLSIVSSIFEEAINTAFP---GLDLPTVEVTRTNVKNAKFGDYQCNSAMAIFTALKGTPNAAKSPRDVATAIINAIPENGLLERLSVAGAGFINAFLSETFLNTRLCNVLQKGVFPSPVKPTRIVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQGHDVERINHVGDWGTQFGMLICHLMEAYPQWETEMPNVTDLTLLYKAAKERFDSDEEFHKRSKHHVVLLQSGDPQSRKV 453
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A662XGF7_9STRA (Arginine--tRNA ligase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGF7_9STRA) HSP 1 Score: 279 bits (714), Expect = 3.450e-81 Identity = 200/481 (41.58%), Postives = 264/481 (54.89%), Query Frame = 1
Query: 310 LSGDGPGP--LKCVNAARFYGVKVEASNTNPAGDLSFAS-GCVLA-----AEDSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGG-----PSPPETLTALAHLEENL----AGDW-LLEGDNPSLSDLVVGTTTRAAIARLGD--GETSSFPKIQAYVKRLEELDAFAQAASGIDKFIKASQPGA-ILAGLQASLLA----------------------------IFDTAMFKAWPLAKGTGITSSGVVK--CFNYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
L G PG LKC A K A D +AS G +A A D LIF +NA+CRY S A + QS + AV++WLEWE LAP R K +P G PS E LT + +E AG+ L G +L+D+V G T RAA+ + + E + +AYV +L + F + A+ + KAS+ GA + +G A+ A +FD A+ A+P G I + V + N KFGD+QCN+AM++F ALKGT A +P D A I+AA+ TP+++++SVA GFIN L + F+ + N++ +G P K ++VDFSSPNIAK+MHVGHLRSTIIGD +CR+LEF GH V R NHVGDWGTQFGMLI ++ E YP + TE PN+TDLT YKAAK RFDE EF E S+ VV LQSGD ++V
Sbjct: 4 LIGKKPGDEELKCFLALSLTSSKFSVG----AADKKYASCGPQIAVPAKGAADELIFSANAVCRYVS-AAAGALQS----DNLAVDEWLEWEANVLAPWVRQA-KKPAPKGEAAAKPSLAEQLTVILEAKEEARPKNAGELEFLFGSEITLADVVAGVTLRAALKLVKEDASEAAVLKTFRAYVTQLFAREEFIKGAAAMKAGGKASKGGAGVASGAPAASTASVVRSTFKLDDKLAQGLTYHNILSVVELLFDAAIKSAYP---GLDIPAVEVTRTNAKNAKFGDYQCNSAMAIFTALKGTPNAARSPRDVANTIIAAMPETPVLDRLSVAGAGFINAFLTTKFVAARLQNVLVNGVHPDPQKQQTIVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQGHNVKRVNHVGDWGTQFGMLICHLTETYPTWETEMPNVTDLTKLYKAAKERFDEDAEFHERSKAQVVLLQSGDEKSRKV 471
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A5D6XU35_9STRA (Arginine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU35_9STRA) HSP 1 Score: 274 bits (700), Expect = 2.220e-79 Identity = 190/452 (42.04%), Postives = 245/452 (54.20%), Query Frame = 1
Query: 322 GPGPLKCVNAARFYGVKVEASNTNPAGDLSFAS-GCVL------AAEDSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGDWL--------LEGDNPSLSDLVVGTTTRAAIARLG--DGETSSFPKIQAYVKRLEELDAFAQAASG--------IDKFIKASQPGAILAGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTP-PKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
GP LKC A G K T A D S A+ G L A ED+ +F +NA+CRY A+ +L AV++WLEWE+ LAP R + + P+P LA L GD L L G +L+D+V G T R A+A + GE K +AYV +L FA+A + + A G + A + IF A+ A+P G + V + N KFGD+QCN+AM++F ALKG+ A P D A AI+ A+ A P + SVA GFIN L AF+ + +++HG P P AK RV+VDFSSPNIAK+MHVGHLRSTIIGD +CR+LEF GH V R NHVGDWGTQFGMLI ++ E YP + TE P++ DLT YKAAK RFD F + S+ VV LQSGD ++V
Sbjct: 10 GPEELKCFLALALTGTKF----TTGALDASAAARGPQLVVADPKAQEDARVFSANAVCRYV----AALANAL-LADDLAVDEWLEWESAVLAPWVRAATT--AQDAPAPEVRAEQLAALLSAKDGDALAAAAPPAFLFGSEVTLADVVAGVTLREALALVPATQGEAPVLAKYRAYVAQLFAHGEFAKATAAPAAPSVADLSHLDAAQLAGCTQHNVLALIETIFGAAIAAAFP---GLDVPPVEVTRTKNAKFGDYQCNSAMAIFTALKGSPSAAKAPRDVAQAIINALPANPAVHNFSVAGPGFINAFLTPAFVANRLAAVLRHGVQPSPPAKRLRVVVDFSSPNIAKDMHVGHLRSTIIGDTMCRILEFQGHNVDRINHVGDWGTQFGMLICHLTETYPAWATELPDVQDLTKLYKAAKERFDADAGFHQRSKEQVVRLQSGDATARQV 447
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: K3WKF0_GLOUD (Arginine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKF0_GLOUD) HSP 1 Score: 272 bits (696), Expect = 7.810e-79 Identity = 182/447 (40.72%), Postives = 248/447 (55.48%), Query Frame = 1
Query: 322 GPGPLKCVNAARFYGVKVEASNTNPAGDLSFA-SGCVLAA------EDSLIFGSNAICRYFS-YKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENL---AGDWL--LEGDNPSLSDLVVGTTTRAAIARLG-DGETSSFPKIQAYVKRLEELDAFAQAASGIDKFIKAS-------QPGAILAGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
G LKC A G K T A D +A G LA +D +IF +NA+CRY + + A + L AV++W+EWE+ LAP LT L +E +GD L L G +L+D+V G T R A+A + + E+ + K +AYV +L FA+A++ K KA GA + + +IFD A+ A+P G I + V + N KFGD+QCN+AM++F ALKGT A +P D A I+ + ++ +SVA GFIN L AF+N + ++++G P K ++VDFSSPNIAK+MHVGHLRSTIIGD +CR+LEF GH V R NHVGDWGTQFGMLI ++ E YPN+ T+ P++ DLT YKAAK RFD E+F + S++ VV LQSGD +V
Sbjct: 10 GAEELKCFLALALTGAKF----TTGATDAKYALCGPQLAVANPKTKQDEVIFSANAVCRYVAIHANALQAEDL------AVDEWIEWESAVLAPWVNKTKKDAKKDKTVVAAELTTLLDAKEQARGASGDTLEFLFGAELTLADVVAGVTLREALALVPVEDESETIKKFRAYVAQLFARAEFAKASAAPAKATKAVLELDADVASGATQHQVLTLVESIFDAAIKAAFP---GLDIPAVEVTRTKNPKFGDYQCNSAMAIFTALKGTPNAAKSPRDVAQTIITSFPDNTVVHNLSVAGAGFINAFLTPAFVNARLRTVLRNGVQPSPQKKMNIVVDFSSPNIAKDMHVGHLRSTIIGDTLCRILEFQGHNVNRVNHVGDWGTQFGMLICHLTETYPNWETQMPDVQDLTKLYKAAKERFDADEDFHKRSKDGVVLLQSGDEKSLKV 443
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: H3H5G2_PHYRM (Arginine--tRNA ligase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5G2_PHYRM) HSP 1 Score: 266 bits (680), Expect = 2.340e-76 Identity = 192/473 (40.59%), Postives = 255/473 (53.91%), Query Frame = 1
Query: 310 LSGDGPGP--LKCVNAARFYGVKVEASNTNPAGDLSFAS-GCVLA--AEDSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENL----AGDWL-LEGDNPSLSDLVVGTTTRAAIARLGDGETSSFPKIQAYVKRLEELDAFAQAASGIDKFI---KASQPGAILAGLQASLL----------------------------AIFDTAMFKAWPLAKGTGITSSGVVKCF--NYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
L G PG LKC A G A D +AS G LA +E L+F +NA+CRY + A QS AV++WLEWE LAP R+ + S + LTAL +E +GD L L G + SL+D+V G T RAA+ + + + S +Q + K + +L A A G+ KA++ G A A+ +IFD A+ A+P G + V + N KFGD+QCN+AM++F ALKG+ A +P D A I+AA+ TP+++++SVA GFIN L AF+ + + N++ +G P K V+VDFSSPNIAK+MHVGHLRSTIIGD + R+LEF V R NHVGDWGTQFGMLI ++ E YP + TE PN+TDLT YKAAK RFD EEF E S+ VV LQSGD ++V
Sbjct: 4 LIGKKPGDEELKCFLALSITGTTFSVG----AADKKYASCGPQLAVESESDLLFSANAVCRYVA-SAAGQLQS----EDLAVDEWLEWEANVLAPWLRVAKAASSNKSGELADQLTALLEAKEEARAKNSGDLLFLFGSDLSLADVVAGVTLRAALKLVKEQQDES-QVLQTFRKYVTQLFARADVVQGVASMKNAGKAAKKGGAPAAAAATAAKDVVRSTFKLDEKLAQGLTYHNILEVVESIFDAAIKAAYP---GLDVPPVEVTRTNVKNAKFGDYQCNSAMAIFTALKGSPNAARSPRDVANTIIAAMPETPVLDRLSVAGAGFINAFLTKAFVAKRLQNVLVNGVQPAPQKKQTVVVDFSSPNIAKDMHVGHLRSTIIGDTMSRILEFQNFDVKRINHVGDWGTQFGMLICHLTETYPTWETEMPNVTDLTLLYKAAKERFDVDEEFHERSKAQVVLLQSGDEKSRKV 463
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A7S3H4P3_9STRA (Arginine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4P3_9STRA) HSP 1 Score: 267 bits (682), Expect = 6.280e-76 Identity = 137/239 (57.32%), Postives = 164/239 (68.62%), Query Frame = 1
Query: 889 AGLQASLLAIFDTAMFKAWPLAKGTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEG--APLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
AGL +SL +FD A+ A+P S + +C N FGDFQCN AM L KALKG EG P++P D A I+ A+ P++ S P GFINI L +A + I IV++G PP P +VLVDFSSPNIAKEMHVGHLRSTIIGD++CR+LEFCG V R NHVGDWGTQFGMLI Y++EAYP+ LT P NI+DLT YKA+K RFDE E FK SRN VV LQ+GDP C +
Sbjct: 330 AGLMSSLKIVFDAALIAAFPQVPEAR-AGSVISRCGNAAFGDFQCNNAMGLSKALKGLEGYQGPVSPKDVAERIIKAIPENPIVSATSSVPNGFINITLSTATLTNSIAGIVQNGVKPPVLPPQKVLVDFSSPNIAKEMHVGHLRSTIIGDSVCRLLEFCGFDVQRVNHVGDWGTQFGMLITYLQEAYPDILTNPVNISDLTVIYKASKKRFDEDETFKLTSRNNVVKLQAGDPACTAI 567
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A2D4BWG4_PYTIN (Arginine--tRNA ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWG4_PYTIN) HSP 1 Score: 263 bits (673), Expect = 1.470e-75 Identity = 180/446 (40.36%), Postives = 250/446 (56.05%), Query Frame = 1
Query: 310 LSGDGPGP--LKCVNAARFYGVKVEASNTNPAGDLSFAS-GCVLAAE-DSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGDWL--LEGDNPSLSDLVVGTTTRAAIARLG-DGETSSFPKIQAYVKRLEELDAFAQAASGIDKFIKASQP--GAILAG-----LQASLLAIFDTAMFKAWPLAK--GTGITSSGVVKCFNYKFGDFQCNAAMSLFKALKGTEGAPLNPMDAAAAIVAAVSATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
L D PG LKC A G AS + A D +AS G L E D++IF +NA+CRY A++ + ++ AV++W+EWE+ LAP D L L G SL+D+V T R+A+ + + +T K + YV ++ +F + A+ + K + A+L G + + ++F A+ A+P + +T + V N KFGD+QCN+AM++F ALKGT A +P D A AI+AA+ +E+++VA GFIN L +FI + N++K G P +RV+VDFSSPNIAK+MHVGHLRSTIIGD I RVLEF GH V R NHVGDWGTQFGMLI ++ E YP + TE PN+TDLT YKAAK RFD E+F++ S+ VV+LQSG+P ++V
Sbjct: 4 LISDKPGAEELKCFIALAATG----ASFSVGASDPKYASCGPQLVVEADNVIFSANAVCRYI----AAAADNALQLDDLAVDEWVEWESHVLAPWVNKAKKAADXXXXXXXXXXXXXXXXXXRAKTDALQFLFGQELSLADVVAAVTLRSAVELVAAENDTPILKKFRDYVTQIFAHGSFVKGAALLASGGKPASKLDAAVLTGETYHNVLTIVESLFRDAIEAAYPGIELPAVEVTRTNVK---NAKFGDYQCNSAMAIFTALKGTPNAAKSPRDVAMAIIAAMPENKALERLTVAGAGFINAFLTPSFIASRLINVLKKGVYPSPVPKARVVVDFSSPNIAKDMHVGHLRSTIIGDTISRVLEFQGHEVLRTNHVGDWGTQFGMLICHLMEEYPQWETEMPNVTDLTKLYKAAKERFDNDEDFRKRSKQQVVELQSGNPQSRKV 438
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Match: A0A7S2SFN5_9STRA (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFN5_9STRA) HSP 1 Score: 263 bits (671), Expect = 5.740e-75 Identity = 186/485 (38.35%), Postives = 250/485 (51.55%), Query Frame = 1
Query: 337 KCVNAARFYGVKVEASNTNPAGDLSFASG-----CVLAAEDSLIFGSNAICRYFSYKGASSPQSLGRVHHAAVEKWLEWETVKLAPAERMLDSKLSPGGPSPPETLTALAHLEENLAGD-WLLEGDNPSLSD--LVVGTTTRAAI-----ARLGDGETSSFPKIQAYVKRLEEL-DAFAQAASGIDKFIKASQPGAILA--------GLQASLLAIFDTAM-------------------------------FKAWPLAKGTGITSSGVVK--CF----NYKFGDFQCNAAMSLFKALKGTE---GAPLNPMDAAAAIVAAV--SATPLIEQMSVAPGGFINIRLRSAFINQGITNIVKHGPTPPKAKPSRVLVDFSSPNIAKEMHVGHLRSTIIGDAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMREAYPNFLTEPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPGCKEV 1599
KC+ A+ GV + + LS A+ + +IFG+NAICRY A+ + + + E+ E E ++L PA L S ++ L L + + +L++ D S++ ++G T AA L G +F + + LE+L +A A+G + + A+ A GL SL A+ D A F A A + S V + C N KFGD+QCN+ M LFKALK + G+ P D +V A+ +A + ++VAP GF+N+R+ AF G+ +I + GP PP AK RV VDFSSPNIAKEMHVGHLRSTIIGD ICR+LE+ GH V R NHVGDWGTQFGMLI YM+EAYP+FL PPNI+DLTTFYK AK RFDE ++FKE +R TVVDLQ+GDP C+ V
Sbjct: 174 KCLACAQALGVSLSVAPARDPALLSHAAAGLGLPLLKLPTQEIIFGANAICRYLGMASAAGSLAPPKASELSDEECFELEELELEPALLALQSAVA-------SEAVVLPILHDTAPKENFLVDFDEYSIAYQYTMLGATAGAAAQGTAQTSLPPGAAKAFQSLTTALGALEKLLEASTGKAAGAILAVTLAGVAAVTALDAYPRCQGLLGSLQAVVDQAAXXXXXXXXXXVAAVTANVEFSGSLLEFLTDSFMAAIQASFPQLEESAVDRKHCIRRQTNAKFGDYQCNSPMELFKALKQRDVLPGSCKRPADVGQMVVDALPAAARDICSDVTVAPAGFVNLRISKAFAASGLQSINEKGPCPPAAKKRRVCVDFSSPNIAKEMHVGHLRSTIIGDTICRMLEYVGHEVHRINHVGDWGTQFGMLILYMKEAYPDFLNSPPNISDLTTFYKQAKKRFDEDQQFKEQARLTVVDLQAGDPSCRAV 651 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5783.13253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5783.13253.1 >prot_H-elongata_contig5783.13253.1 ID=prot_H-elongata_contig5783.13253.1|Name=mRNA_H-elongata_contig5783.13253.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=533bp QVLKLLAAKQRFKEVTGTDYSPPHQDKKAKAAPKAGPANTPTSSNPPSYSback to top mRNA from alignment at H-elongata_contig5783:7098..11341+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5783.13253.1 ID=mRNA_H-elongata_contig5783.13253.1|Name=mRNA_H-elongata_contig5783.13253.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4244bp|location=Sequence derived from alignment at H-elongata_contig5783:7098..11341+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5783:7098..11341+ >mRNA_H-elongata_contig5783.13253.1 ID=mRNA_H-elongata_contig5783.13253.1|Name=mRNA_H-elongata_contig5783.13253.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3198bp|location=Sequence derived from alignment at H-elongata_contig5783:7098..11341+ (Himanthalia elongata Himel1 dioecious)back to top |