mRNA_H-elongata_contig5744.13213.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5744.13213.1
Unique NamemRNA_H-elongata_contig5744.13213.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A6H5KCD7_9PHAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD7_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.730e-57
Identity = 93/122 (76.23%), Postives = 109/122 (89.34%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            G +S IG++AK+L+S+YRE TP RL++LDMFL+F+  TGVLQ      FVYC+LVG+FPFNSFLAGFSSTVGAFVLTVSLRMQV+EAS++GGVV GRSLERCFAEYVVCN+VLFLVVMNFMG
Sbjct:   17 GAMSAIGEVAKQLQSNYREITPKRLRMLDMFLLFVFATGVLQ------FVYCVLVGSFPFNSFLAGFSSTVGAFVLTVSLRMQVMEASDNGGVVRGRSLERCFAEYVVCNMVLFLVVMNFMG 132
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A6G0XIX2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIX2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.080e-36
Identity = 67/119 (56.30%), Postives = 87/119 (73.11%), Query Frame = 1 
Query:   10 SVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            S++ DL     + Y +NTP ++KL+D FLV++L TG+LQ      FVYC+LVGTFPFNSFL+GF STVG FVLTVSLRMQ+  +++       RS +R FA+Y+ CN +LFLVVMNFMG
Sbjct:   20 SIVADLW----TQYSKNTPRKVKLIDGFLVYVLATGILQ------FVYCVLVGTFPFNSFLSGFLSTVGVFVLTVSLRMQIDPSNQQAFAASPRSPQRAFADYLFCNCILFLVVMNFMG 128
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: T0PSD9_SAPDV (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0PSD9_SAPDV)

HSP 1 Score: 129 bits (323), Expect = 4.000e-36
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 1 
Query:   16 IGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            +  +   L S Y +NTP ++KL+D FL ++L TGVLQ      FVYCMLVGTFPFNSFL+GF STVG FVLTVSLRMQ+   +        R+ ER FA+Y+ CN +LFLVVMNFMG
Sbjct:   15 VNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQ------FVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A485L3R2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3R2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.370e-36
Identity = 65/114 (57.02%), Postives = 85/114 (74.56%), Query Frame = 1 
Query:   25 LAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            L  +L S Y +NTP ++KL+D FL +++ TGVLQ      F+YC+LVGTFPFNSFL+GF +TVG FVLTVSLRMQ+  ++ +      RS +R FA+Y+ CN+VLFLVVMNFMG
Sbjct:   21 LLSELLSQYNKNTPRKIKLIDGFLAYVMATGVLQ------FLYCLLVGTFPFNSFLSGFIATVGVFVLTVSLRMQIDPSNAAAFAADPRSPQRAFADYLFCNLVLFLVVMNFMG 128
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: D0NLD6_PHYIT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NLD6_PHYIT)

HSP 1 Score: 124 bits (310), Expect = 2.890e-34
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            GV S++GDL  K    Y + TP ++KL+D FL ++L TGVLQ      F+YC+LVG FPFNSFLAGF  TVG FVL VSLRMQ+   +  G     R+ +R FA+Y+ CNI+LFLVV NFMG
Sbjct:    9 GVGSILGDLCSK----YDKTTPKKIKLIDGFLAYVLATGVLQ------FIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGD----RTEQRAFADYLFCNIILFLVVFNFMG 116
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A3F2RV81_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RV81_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.990e-34
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            GV S++GD   K    Y + TP ++KL+D FL ++L TGVLQ      F+YC LVGTFPFNSFLAGF  TVG FVL VSLRMQ+   +  G     R+ +R FA+Y+ CNI+LFLVV NFMG
Sbjct:   10 GVSSILGDFCAK----YDKTTPKKIKLIDGFLAYVLATGVLQ------FIYCTLVGTFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGD----RTEQRAFADYLFCNIILFLVVFNFMG 117
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A5D6Y7L9_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7L9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.580e-33
Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            GV ++I D   K    Y ++TPT++KL+D FL ++L TGVLQ      F+YC LVGTFPFNSFLAGF  TVG FVL VSLRMQ+   +E       RS +R FA+Y+ CN++LFLVV NFMG
Sbjct:   12 GVGAIIADFRAK----YAQSTPTKIKLIDGFLAYVLATGVLQ------FIYCALVGTFPFNSFLAGFVCTVGVFVLGVSLRMQINPENEFKD----RSEQRAFADYLFCNLILFLVVFNFMG 119
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: K3WS81_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS81_GLOUD)

HSP 1 Score: 121 bits (303), Expect = 3.060e-33
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 1 
Query:   16 IGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            +G +    ++ Y++ TP ++KL+D FL ++L TG+LQ      F+YC+LVGTFPFNSFLAGF  TVG FVL VSLRMQ+   +E       RS +R FA+Y+ CNI+LFLVV NFMG
Sbjct:    7 VGGILADFQTKYQQTTPKKIKLIDGFLAYVLATGILQ------FIYCVLVGTFPFNSFLAGFVCTVGVFVLGVSLRMQINPENEFKD----RSEQRAFADYLFCNIILFLVVFNFMG 113
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: A0A6A3ZEA5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZEA5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.520e-33
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            GV S++GD   K    Y + TP ++KL+D FL ++L TGVLQ      F+YC+LVG FPFNSFLAGF  TVG FVL VSLRMQ+   +  G     R+ +R FA+Y+ CNI+LFLVV NFMG
Sbjct:   50 GVGSILGDFCAK----YDKTTPKKIKLIDGFLAYVLATGVLQ------FIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENSFGD----RTEQRAFADYLFCNIILFLVVFNFMG 157
[Close]
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Match: G4ZSB6_PHYSP (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSB6_PHYSP)

HSP 1 Score: 122 bits (305), Expect = 6.550e-33
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 1 
Query:    1 GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFVYCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLERCFAEYVVCNIVLFLVVMNFMG 366
            GV S++GD   K    Y + TP ++KL+D FL ++L TGVLQ      F+YC+LVG FPFNSFLAGF  TVG FVL VSLRMQ+   +  G     R+ +R FA+Y+ CNI+LFLVV NFMG
Sbjct:   56 GVGSILGDFCAK----YDKTTPKKIKLIDGFLAYVLATGVLQ------FIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGD----RTEQRAFADYLFCNIILFLVVFNFMG 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5744.13213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCD7_9PHAE1.730e-5776.23Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6G0XIX2_9STRA3.080e-3656.30Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
T0PSD9_SAPDV4.000e-3657.26Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A485L3R2_9STRA4.370e-3657.02Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D0NLD6_PHYIT2.890e-3454.92Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A3F2RV81_9STRA5.990e-3454.92Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A5D6Y7L9_9STRA2.580e-3354.92Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K3WS81_GLOUD3.060e-3352.99Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6A3ZEA5_9STRA5.520e-3354.10Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
G4ZSB6_PHYSP6.550e-3354.10Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5744contigH-elongata_contig5744:8778..10244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.5
Seed ortholog evalue4.3e-27
Seed eggNOG ortholog112098.XP_008621413.1
Preferred nameDAD1
KEGG koko:K12668
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
GOsGO:0001701,GO:0001824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009790,GO:0009792,GO:0009987,GO:0009991,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031667,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0042493,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0060548,GO:0065007,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.dolichyl-diphosphooligosaccharide-protein glycotransferase activity
EggNOG OGsKOG1746@1,KOG1746@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionOligosaccharyltransferase, DAD1 subunit (or epsilon subunit)
Ec32 orthologEc-07_004230.1
Exons3
Model size369
Cds size369
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5744.13213.1prot_H-elongata_contig5744.13213.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5744 8778..10244 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930933.5718117-CDS-H-elongata_contig5744:8777..89141622930933.5718117-CDS-H-elongata_contig5744:8777..8914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 8778..8914 -
1691679630.586876-CDS-H-elongata_contig5744:8777..89141691679630.586876-CDS-H-elongata_contig5744:8777..8914Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 8778..8914 -
1622930933.5899754-CDS-H-elongata_contig5744:9551..96391622930933.5899754-CDS-H-elongata_contig5744:9551..9639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 9552..9639 -
1691679630.604636-CDS-H-elongata_contig5744:9551..96391691679630.604636-CDS-H-elongata_contig5744:9551..9639Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 9552..9639 -
1622930933.6076972-CDS-H-elongata_contig5744:10100..102441622930933.6076972-CDS-H-elongata_contig5744:10100..10244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 10101..10244 -
1691679630.6129048-CDS-H-elongata_contig5744:10100..102441691679630.6129048-CDS-H-elongata_contig5744:10100..10244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5744 10101..10244 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5744.13213.1

>prot_H-elongata_contig5744.13213.1 ID=prot_H-elongata_contig5744.13213.1|Name=mRNA_H-elongata_contig5744.13213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
GVVSVIGDLAKKLESSYRENTPTRLKLLDMFLVFLLVTGVLQACPDTRFV
YCMLVGTFPFNSFLAGFSSTVGAFVLTVSLRMQVVEASESGGVVGGRSLE
RCFAEYVVCNIVLFLVVMNFMG*
back to top

mRNA from alignment at H-elongata_contig5744:8778..10244-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5744.13213.1 ID=mRNA_H-elongata_contig5744.13213.1|Name=mRNA_H-elongata_contig5744.13213.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1467bp|location=Sequence derived from alignment at H-elongata_contig5744:8778..10244- (Himanthalia elongata Himel1 dioecious)
GGAGTGGTGAGCGTGATCGGTGATCTCGCCAAGAAACTGGAGTCGAGCTA
CCGGGAAAACACTCCGACGAGACTGAAGCTCTTGGACATGTTTCTCGTGT
TCCTCCTCGTCACGGGGGTGCTGCAGGCATGTCCCGACACGCGCGTGCTT
GCGCTTCTGTTTGGTGATGTTGATGTATATGCCTCTCTTGCCTTCTTCGA
TTTTTTTTTTTTCGTCCCATATATATATATATATATTTTGTATCAACATT
CCGTGCTTTTGTCAATTTAGTCGATGTAGGTACCGCATGTAGTTCGGATA
GGTCGGTACAGTGACTCAGCCGTCCGTGCGACGGGGTGGCCTCACGAACG
AAGGAGAACGCGACATTTGGCTTCGATGATAATATGTCGCGAATCGGACG
CCACAACCCCAGGGTGGGACAGCGGCAGCTATACGGGAGACAAGCGCAAC
ACACGACATCCCCATTGTTGAAACATTTCAAGGCTTGGATTGTTCAAAAT
ATCCCCTCAGATTCGCGCCGCTGTTGCCGCCACCGCCCTCTGTGCAATTT
ATTTCGCGGTGCCCCATTCGCTGGCCCAAACTCCGGATCCCGCCTCCTAT
GACAGTTCGTGTACTGCATGCTGGTGGGAACGTTTCCGTTCAACTCTTTC
CTCGCGGGGTTTTCCTCCACCGTGGGGGCGTTCGTGTTGACAGGTGAAAA
CGGCCTTCGAGGTCCTTCTCGTGGAGAGGTCGCTATGCGGCTCCTCTCGC
GTGTGTATCAGCGCAACGTTATTTACCTGTAGTTCAGTTGTCGGTCGGAA
AATGTTGCGAATCAAGGTTGGTCATATTATCTAAGGCGCTTGTCTTGAGG
TAGCCCGACTGCTGCCGCTTCCTGAAAAAAGAAAAATGCTGGGGATACCG
CCCGAATTCGTTTCCTCGGATTTATGCTGCACATACGAATTATAGATATA
ATATTTGTAGATGCGTTGAGGCCACAGCGAGCCTAGGAGCTCGAGAAGCC
TGCTCCGACATTCGCTACGCACAATGCGACGGCGTCTAGACACACCCTAC
ACCCTACCCCTACTATCCCCGACACCTGAACTCTCGGCTCTCTCTCTCTC
TCTGCACTAGATATTCCACGAGTCCATATATCTCGCAATTAGGCCGCGGG
TCATGTAGGTCGAAAGCTTCATCTTTATCGAGAGCTCACGTTCCGTCGTC
TGCGATTATTAATAACTGCTTGCATGCCTCAGATCAATTGATCTTACTCC
GCCGTAAACCGTCGGGCAATGGGGGGTTTCCTTGTTTGTCTTGGGGCGTG
ATTTACTTCCCATTTCGCGGTGCTCCGAAGTGTCTTTGAGAATGCAGGTT
GTGGAGGCCAGCGAGAGCGGAGGGGTGGTCGGGGGCCGGTCCTTGGAGCG
ATGCTTCGCCGAGTACGTGGTGTGCAACATAGTGCTGTTTCTGGTGGTGA
TGAACTTCATGGGTTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig5744:8778..10244-

>mRNA_H-elongata_contig5744.13213.1 ID=mRNA_H-elongata_contig5744.13213.1|Name=mRNA_H-elongata_contig5744.13213.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig5744:8778..10244- (Himanthalia elongata Himel1 dioecious)
GGAGTGGTGAGCGTGATCGGTGATCTCGCCAAGAAACTGGAGTCGAGCTA
CCGGGAAAACACTCCGACGAGACTGAAGCTCTTGGACATGTTTCTCGTGT
TCCTCCTCGTCACGGGGGTGCTGCAGGCATGTCCCGACACGCGCGGAGTG
GTGAGCGTGATCGGTGATCTCGCCAAGAAACTGGAGTCGAGCTACCGGGA
AAACACTCCGACGAGACTGAAGCTCTTGGACATGTTTCTCGTGTTCCTCC
TCGTCACGGGGGTGCTGCAGGCATGTCCCGACACGCGCTTCGTGTACTGC
ATGCTGGTGGGAACGTTTCCGTTCAACTCTTTCCTCGCGGGGTTTTCCTC
CACCGTGGGGGCGTTCGTGTTGACAGTTCGTGTACTGCATGCTGGTGGGA
ACGTTTCCGTTCAACTCTTTCCTCGCGGGGTTTTCCTCCACCGTGGGGGC
GTTCGTGTTGACAGTGTCTTTGAGAATGCAGGTTGTGGAGGCCAGCGAGA
GCGGAGGGGTGGTCGGGGGCCGGTCCTTGGAGCGATGCTTCGCCGAGTAC
GTGGTGTGCAACATAGTGCTGTTTCTGGTGGTGATGAACTTCATGGGTTG
ATGTCTTTGAGAATGCAGGTTGTGGAGGCCAGCGAGAGCGGAGGGGTGGT
CGGGGGCCGGTCCTTGGAGCGATGCTTCGCCGAGTACGTGGTGTGCAACA
TAGTGCTGTTTCTGGTGGTGATGAACTTCATGGGTTGA
back to top