mRNA_H-elongata_contig57144.13168.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI) HSP 1 Score: 391 bits (1004), Expect = 8.610e-130 Identity = 194/240 (80.83%), Postives = 206/240 (85.83%), Query Frame = 1
Query: 4 RQELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQ 723
R ELESLYKK + I FRG DRLKLLYSILVAK D GCNLD+LRLVKSKCLLAFFPLHDKVELR LQ KWL+YFR PW EP DDVKNYFGEKIGLYFLWL HYTTWLIPASI G+ AW VA++GNDPN+ GSA+FSIFIGLWTTLF EFWKRKQARCAMRWGMSGFEEQEQTRPQY+GIRSSSTIDGKPMDYFPP ESRKRF+ SQ +I LILVVIG VAS FWLK+FLTQ
Sbjct: 115 RPELESLYKKHGGLEREVMMIPFRGTDRLKLLYSILVAKTADSGCNLDILRLVKSKCLLAFFPLHDKVELRALQRKWLQYFRPPWKEPIDDVKNYFGEKIGLYFLWLGHYTTWLIPASIVGVMAWVHVALSGNDPNALGSALFSIFIGLWTTLFTEFWKRKQARCAMRWGMSGFEEQEQTRPQYKGIRSSSTIDGKPMDYFPPSESRKRFIFSQTVILGLILVVIGVVASIFWLKYFLTQ 354
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA) HSP 1 Score: 300 bits (768), Expect = 1.970e-94 Identity = 144/240 (60.00%), Postives = 185/240 (77.08%), Query Frame = 1
Query: 4 RQELESLYKKQ-ETANQGEK-KIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFL 717
R ++ESLYK+ + A G KI+FRG DRLKL+Y+I+VAK ++ GCNLD+++L+K K +L FFPLHDKVELR LQ W RY + PW +P DVK+Y+GEKIGLYFLWL HYTTWL+PASI G+ AW VA GNDPN G+A FS+F+ LW T+F EFW+R+QA MRWGM+GFE++EQTRPQ++G RS++ +DG+P+DYFP E+ KRF+ S +I L+ VVI AVAS F LK FL
Sbjct: 116 RPDMESLYKRYGDAAGAGSAPKIVFRGVDRLKLMYTIMVAKSSEGGCNLDIVKLLKYKAILGFFPLHDKVELRLLQRAWFRYVQAPWAQPIQDVKDYYGEKIGLYFLWLGHYTTWLLPASICGILAWINVAAAGNDPNVPGTAAFSVFVALWCTMFTEFWRRRQATYTMRWGMTGFEQEEQTRPQFKGTRSTNPVDGRPIDYFPRSEATKRFVFSATVITALVCVVIAAVASIFLLKEFL 355
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A7S3GXB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXB2_9STRA) HSP 1 Score: 238 bits (606), Expect = 6.550e-74 Identity = 117/229 (51.09%), Postives = 162/229 (70.74%), Query Frame = 1
Query: 52 GEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
G + + RG DRLKL+ +I+ A+ +D G LDV RL+KSKC++ FFPLHD VELR L+ KWLR + PW + V++YFGEKIGL+FL+L HYTTWL+PASI G FAW VA NDP++ F++F+G+W+TLF E+WKRK+ AM+WGM GFE+ + RPQ++G S+S +DG+ M YFP R IS ++ VLIL+V+ +AS F ++ ++TQ+SA V
Sbjct: 96 GVSESVLRGVDRLKLIANIIAARLSDGGAFLDVHRLIKSKCMITFFPLHDAVELRDLEEKWLRMCQPPWKQYIQPVRDYFGEKIGLFFLFLGHYTTWLLPASIVGFFAWTNVASEANDPDAIIIPYFAVFVGVWSTLFLEYWKRKEKLAAMKWGMVGFEDTQLDRPQFEGEPSTSPVDGRKMLYFPKAILVFRETISVAVVGVLILIVLCIIASIFVMRIYMTQSSAFV 324
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A812UTJ6_SYMMI (Ano4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTJ6_SYMMI) HSP 1 Score: 219 bits (559), Expect = 7.040e-68 Identity = 115/244 (47.13%), Postives = 151/244 (61.89%), Query Frame = 1
Query: 7 QELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
+++E LY+ E N G +FRG DRLKL+Y I+ AK+ + GCNLD+ ++ K LL FFPLHD VEL TL+ KWL++ + PWN+PTD++KNYFGEKIGLYFLWL HYT+WL A++ G F W +A + NDPN+ F+ FI W TLF EFWKRK+ + G + S + GK YFP E ++R + ++IF ILVVIGAV + F LK L Q SA V
Sbjct: 16 EDVEELYETYEF-NGGS---VFRGVDRLKLIYGIIAAKQYENGCNLDIYKMSKEGALLGFFPLHDHVELHTLEEKWLQFIQLPWNQPTDEIKNYFGEKIGLYFLWLGHYTSWLSVAAVVGFFCWINIAADDNDPNAVIMPYFASFIAFWATLFLEFWKRKE---------------------FVGEKRPSPVTGKEYLYFPRNEEQQRLCQTSIVIFGFILVVIGAVTAIFILKITLNQISALV 234
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A482SUW2_9ARCH (Anoct_dimer domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUW2_9ARCH) HSP 1 Score: 229 bits (585), Expect = 1.120e-67 Identity = 109/224 (48.66%), Postives = 153/224 (68.30%), Query Frame = 1
Query: 67 IFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
+FRG DRLKL+ +I+ AK+T+ GC+LDV RL + C+LAFFPLHD VELR L+ KWLR + PW + + VK+YFGEKI L+FL+L HYT+WL PA I G+FAW V + N+P++ F+ F+ +W+TL E+WKRK+ AMRWG GFE++EQ RP+++G S + G P+ YFP + R +S +I VL++VVI VA F+L+ L+ + V
Sbjct: 230 VFRGVDRLKLIATIIAAKQTEGGCDLDVYRLKRDSCILAFFPLHDAVELRELEEKWLRMCQVPWKQNVEAVKDYFGEKIALFFLFLGHYTSWLFPAGIIGVFAWINVVSDDNNPSAPIMPFFAAFVAIWSTLLLEYWKRKEKTFAMRWGTVGFEDEEQNRPEFEGEPDVSPVTGAPIRYFPKKQFLFRLFVSTNVISVLVMVVIAVVAGIFFLRIILSNMRSLV 453
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A6V2ZSX1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZSX1_HETAK) HSP 1 Score: 214 bits (544), Expect = 7.820e-61 Identity = 109/228 (47.81%), Postives = 143/228 (62.72%), Query Frame = 1
Query: 70 FRGADRLKLLYSILVAKRTD--MGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVSTL 747
F+G DRLKL+Y I+ AK MG NL++ + K + FPLHD EL L+ +WL+ ++PW +PTDD+K+YFGEKIGLY++WL HYTTWL+P + GL W +A G DPN+ FS I LW T F E+WKRK++ AM WG GFEEQEQ RPQ+ G + +S I G+P F P E KR LISQ I +IL+V+ AV S +K + +TL
Sbjct: 232 FKGIDRLKLIYGIMTAKNDPEFMGANLNITEMKDKKGIEDLFPLHDYDELVGLEKRWLKLMQWPWQQPTDDIKDYFGEKIGLYYVWLGHYTTWLMPPMLTGLGFWFAIATQGGDPNTVYLIPFSALIALWATFFLEYWKRKESETAMFWGTRGFEEQEQDRPQFFGDKKNSEITGQPETVFNPNEKMKRNLISQTFISFMILMVLTAVVSITVMKVIFNTVPSVTNTL 459
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A397ETC2_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ETC2_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.450e-58 Identity = 100/243 (41.15%), Postives = 150/243 (61.73%), Query Frame = 1
Query: 13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVS 741
L+ +YKK G KKI FRG DR+KL+ SI+ + TD GC+L+V L KCL+ + LHD+ E +L KW+ + PW +P ++K+Y+GEK+GLYF+WL HYTTWLI S+ G+ + + + P++ ++F +F+ LW T++ E WKR+ + + WGM GFEE+E R ++ G+ S +DG+PM YF + R S + IFVLIL+V+ AVA+ F ++F A S
Sbjct: 155 LQPVYKKY-----GHKKIPFRGVDRIKLILSIVGSSTTDGGCHLNVTTLTIKKCLVTAYALHDEEEQASLTKKWINWASLPWQQPYTEIKDYYGEKVGLYFVWLGHYTTWLIGPSVVGIAMLVNIVME-HTPDARLISVFGLFMALWGTVYLESWKRRNSVIKLEWGMDGFEEEEGDRAEFDGVEVESPVDGRPMRYFSAKKKTSRVCASLVFIFVLILMVLAAVAAIFVFRYFARPGKALES 391
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A024UWI9_9STRA (Anoct_dimer domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWI9_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.790e-58 Identity = 104/243 (42.80%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVS 741
L+ LYKK G KKI FRG DR+KL+ SI+ A TD GC+L++ L CL+ + LHD+ E + KW+ + PW +P D+K+Y+GEK+GLYF+WL HYTTWLI SI G+ + + SA F +F+ LW T++ E WKR+ + + WGM GFEE+++ R ++ G S +DG+PM YF P + R R S + IF+LIL+VIGAVA+ F ++F + A S
Sbjct: 149 LQPLYKKY-----GHKKIPFRGVDRIKLILSIIHASTTDGGCHLNITTLTLKNCLVTAYALHDEEEQEAVTKKWINWSSLPWQQPFSDIKDYYGEKVGLYFVWLGHYTTWLIGPSIVGIAMLVDIVIERTVDARLISA-FGLFMALWGTVYLESWKRRNSVVKLEWGMDGFEEEQEDRAEFDGEEVESPVDGRPMRYFSPAKQRSRVCASLIFIFMLILMVIGAVAAIFVFRYFARKGHALES 385
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A067D3J2_SAPPC (Anoct_dimer domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D3J2_SAPPC) HSP 1 Score: 205 bits (521), Expect = 6.510e-58 Identity = 110/235 (46.81%), Postives = 145/235 (61.70%), Query Frame = 1
Query: 13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGN-DPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWF 714
L+ +YKK A K+I FRG DR+KL+ SI+ A D GC L+ L +CL+ FPLHD E L KW+R+ PWN+P D+K+Y+GEK+GLYF+WL HYTTWLI SI G A + + G D G +F +F+ LW T + E+WKR+ A + WGM GFEE+E+ R +++G S IDG M YF P KR L S ++IF LIL+VIGAVAS F + F
Sbjct: 154 LQRVYKKYGPAG---KQIPFRGVDRIKLINSIIAAHLYDGGCALNTKMLEMKECLVTSFPLHDFDERDKLNAKWIRWSSAPWNQPYSDIKDYYGEKVGLYFVWLGHYTTWLIAPSIVGAVMLADIIMEGTVDARLLG--VFGLFMALWGTFYLEYWKRRNAVIRLEWGMDGFEEEEKDRAEFEGEEIESPIDGSKMRYFSPEVRTKRVLASLLLIFALILLVIGAVASIFVFRIF 383
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A1V9ZZN0_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZN0_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.210e-56 Identity = 102/234 (43.59%), Postives = 151/234 (64.53%), Query Frame = 1
Query: 13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWF 714
L+++YKK +K+ FRG DR+KL+ SI+ A D GC+L++ L +C++ F LH+ E TL KW+++ PW++P +++K+Y+GEK+GLYF+WL HYTTWLI SI G A + V G ++ A+F IF+ LW T + E+WKR+ A + WGM G+E++E R +++G S IDGKPM YF P +KR L S + IF LI++VIGAVA+ F ++F
Sbjct: 151 LQNVYKKY---GPKDKQTPFRGVDRIKLILSIIHAPVHDGGCHLNLKMLEMKECIVTSFALHNFEERDTLNDKWIKWSSLPWDQPYNEIKDYYGEKVGLYFVWLGHYTTWLIAPSIIGAIMLADIVVEGTV-DARFLALFGIFMALWGTFYLEYWKRRNAVVRLEWGMDGYEDEEHDRAEFEGEEIESPIDGKPMRYFNPEHQQKRILSSLLFIFALIVLVIGAVAAIFVFRYF 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57144.13168.1 >prot_H-elongata_contig57144.13168.1 ID=prot_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp ERQELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVback to top mRNA from alignment at H-elongata_contig57144:272..3768- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57144.13168.1 ID=mRNA_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3497bp|location=Sequence derived from alignment at H-elongata_contig57144:272..3768- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57144:272..3768- >mRNA_H-elongata_contig57144.13168.1 ID=mRNA_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig57144:272..3768- (Himanthalia elongata Himel1 dioecious)back to top |