mRNA_H-elongata_contig57144.13168.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57144.13168.1
Unique NamemRNA_H-elongata_contig57144.13168.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 8.610e-130
Identity = 194/240 (80.83%), Postives = 206/240 (85.83%), Query Frame = 1
Query:    4 RQELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQ 723
            R ELESLYKK     +    I FRG DRLKLLYSILVAK  D GCNLD+LRLVKSKCLLAFFPLHDKVELR LQ KWL+YFR PW EP DDVKNYFGEKIGLYFLWL HYTTWLIPASI G+ AW  VA++GNDPN+ GSA+FSIFIGLWTTLF EFWKRKQARCAMRWGMSGFEEQEQTRPQY+GIRSSSTIDGKPMDYFPP ESRKRF+ SQ +I  LILVVIG VAS FWLK+FLTQ
Sbjct:  115 RPELESLYKKHGGLEREVMMIPFRGTDRLKLLYSILVAKTADSGCNLDILRLVKSKCLLAFFPLHDKVELRALQRKWLQYFRPPWKEPIDDVKNYFGEKIGLYFLWLGHYTTWLIPASIVGVMAWVHVALSGNDPNALGSALFSIFIGLWTTLFTEFWKRKQARCAMRWGMSGFEEQEQTRPQYKGIRSSSTIDGKPMDYFPPSESRKRFIFSQTVILGLILVVIGVVASIFWLKYFLTQ 354          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A835ZD27_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD27_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.970e-94
Identity = 144/240 (60.00%), Postives = 185/240 (77.08%), Query Frame = 1
Query:    4 RQELESLYKKQ-ETANQGEK-KIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFL 717
            R ++ESLYK+  + A  G   KI+FRG DRLKL+Y+I+VAK ++ GCNLD+++L+K K +L FFPLHDKVELR LQ  W RY + PW +P  DVK+Y+GEKIGLYFLWL HYTTWL+PASI G+ AW  VA  GNDPN  G+A FS+F+ LW T+F EFW+R+QA   MRWGM+GFE++EQTRPQ++G RS++ +DG+P+DYFP  E+ KRF+ S  +I  L+ VVI AVAS F LK FL
Sbjct:  116 RPDMESLYKRYGDAAGAGSAPKIVFRGVDRLKLMYTIMVAKSSEGGCNLDIVKLLKYKAILGFFPLHDKVELRLLQRAWFRYVQAPWAQPIQDVKDYYGEKIGLYFLWLGHYTTWLLPASICGILAWINVAAAGNDPNVPGTAAFSVFVALWCTMFTEFWRRRQATYTMRWGMTGFEQEEQTRPQFKGTRSTNPVDGRPIDYFPRSEATKRFVFSATVITALVCVVIAAVASIFLLKEFL 355          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A7S3GXB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXB2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 6.550e-74
Identity = 117/229 (51.09%), Postives = 162/229 (70.74%), Query Frame = 1
Query:   52 GEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
            G  + + RG DRLKL+ +I+ A+ +D G  LDV RL+KSKC++ FFPLHD VELR L+ KWLR  + PW +    V++YFGEKIGL+FL+L HYTTWL+PASI G FAW  VA   NDP++     F++F+G+W+TLF E+WKRK+   AM+WGM GFE+ +  RPQ++G  S+S +DG+ M YFP      R  IS  ++ VLIL+V+  +AS F ++ ++TQ+SA V
Sbjct:   96 GVSESVLRGVDRLKLIANIIAARLSDGGAFLDVHRLIKSKCMITFFPLHDAVELRDLEEKWLRMCQPPWKQYIQPVRDYFGEKIGLFFLFLGHYTTWLLPASIVGFFAWTNVASEANDPDAIIIPYFAVFVGVWSTLFLEYWKRKEKLAAMKWGMVGFEDTQLDRPQFEGEPSTSPVDGRKMLYFPKAILVFRETISVAVVGVLILIVLCIIASIFVMRIYMTQSSAFV 324          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A812UTJ6_SYMMI (Ano4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTJ6_SYMMI)

HSP 1 Score: 219 bits (559), Expect = 7.040e-68
Identity = 115/244 (47.13%), Postives = 151/244 (61.89%), Query Frame = 1
Query:    7 QELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
            +++E LY+  E  N G    +FRG DRLKL+Y I+ AK+ + GCNLD+ ++ K   LL FFPLHD VEL TL+ KWL++ + PWN+PTD++KNYFGEKIGLYFLWL HYT+WL  A++ G F W  +A + NDPN+     F+ FI  W TLF EFWKRK+                     + G +  S + GK   YFP  E ++R   + ++IF  ILVVIGAV + F LK  L Q SA V
Sbjct:   16 EDVEELYETYEF-NGGS---VFRGVDRLKLIYGIIAAKQYENGCNLDIYKMSKEGALLGFFPLHDHVELHTLEEKWLQFIQLPWNQPTDEIKNYFGEKIGLYFLWLGHYTSWLSVAAVVGFFCWINIAADDNDPNAVIMPYFASFIAFWATLFLEFWKRKE---------------------FVGEKRPSPVTGKEYLYFPRNEEQQRLCQTSIVIFGFILVVIGAVTAIFILKITLNQISALV 234          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A482SUW2_9ARCH (Anoct_dimer domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUW2_9ARCH)

HSP 1 Score: 229 bits (585), Expect = 1.120e-67
Identity = 109/224 (48.66%), Postives = 153/224 (68.30%), Query Frame = 1
Query:   67 IFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARV 738
            +FRG DRLKL+ +I+ AK+T+ GC+LDV RL +  C+LAFFPLHD VELR L+ KWLR  + PW +  + VK+YFGEKI L+FL+L HYT+WL PA I G+FAW  V  + N+P++     F+ F+ +W+TL  E+WKRK+   AMRWG  GFE++EQ RP+++G    S + G P+ YFP  +   R  +S  +I VL++VVI  VA  F+L+  L+   + V
Sbjct:  230 VFRGVDRLKLIATIIAAKQTEGGCDLDVYRLKRDSCILAFFPLHDAVELRELEEKWLRMCQVPWKQNVEAVKDYFGEKIALFFLFLGHYTSWLFPAGIIGVFAWINVVSDDNNPSAPIMPFFAAFVAIWSTLLLEYWKRKEKTFAMRWGTVGFEDEEQNRPEFEGEPDVSPVTGAPIRYFPKKQFLFRLFVSTNVISVLVMVVIAVVAGIFFLRIILSNMRSLV 453          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A6V2ZSX1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZSX1_HETAK)

HSP 1 Score: 214 bits (544), Expect = 7.820e-61
Identity = 109/228 (47.81%), Postives = 143/228 (62.72%), Query Frame = 1
Query:   70 FRGADRLKLLYSILVAKRTD--MGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVSTL 747
            F+G DRLKL+Y I+ AK     MG NL++  +   K +   FPLHD  EL  L+ +WL+  ++PW +PTDD+K+YFGEKIGLY++WL HYTTWL+P  + GL  W  +A  G DPN+     FS  I LW T F E+WKRK++  AM WG  GFEEQEQ RPQ+ G + +S I G+P   F P E  KR LISQ  I  +IL+V+ AV S   +K       +  +TL
Sbjct:  232 FKGIDRLKLIYGIMTAKNDPEFMGANLNITEMKDKKGIEDLFPLHDYDELVGLEKRWLKLMQWPWQQPTDDIKDYFGEKIGLYYVWLGHYTTWLMPPMLTGLGFWFAIATQGGDPNTVYLIPFSALIALWATFFLEYWKRKESETAMFWGTRGFEEQEQDRPQFFGDKKNSEITGQPETVFNPNEKMKRNLISQTFISFMILMVLTAVVSITVMKVIFNTVPSVTNTL 459          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A397ETC2_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ETC2_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.450e-58
Identity = 100/243 (41.15%), Postives = 150/243 (61.73%), Query Frame = 1
Query:   13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVS 741
            L+ +YKK      G KKI FRG DR+KL+ SI+ +  TD GC+L+V  L   KCL+  + LHD+ E  +L  KW+ +   PW +P  ++K+Y+GEK+GLYF+WL HYTTWLI  S+ G+     + +  + P++   ++F +F+ LW T++ E WKR+ +   + WGM GFEE+E  R ++ G+   S +DG+PM YF   +   R   S + IFVLIL+V+ AVA+ F  ++F     A  S
Sbjct:  155 LQPVYKKY-----GHKKIPFRGVDRIKLILSIVGSSTTDGGCHLNVTTLTIKKCLVTAYALHDEEEQASLTKKWINWASLPWQQPYTEIKDYYGEKVGLYFVWLGHYTTWLIGPSVVGIAMLVNIVME-HTPDARLISVFGLFMALWGTVYLESWKRRNSVIKLEWGMDGFEEEEGDRAEFDGVEVESPVDGRPMRYFSAKKKTSRVCASLVFIFVLILMVLAAVAAIFVFRYFARPGKALES 391          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A024UWI9_9STRA (Anoct_dimer domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWI9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.790e-58
Identity = 104/243 (42.80%), Postives = 148/243 (60.91%), Query Frame = 1
Query:   13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVS 741
            L+ LYKK      G KKI FRG DR+KL+ SI+ A  TD GC+L++  L    CL+  + LHD+ E   +  KW+ +   PW +P  D+K+Y+GEK+GLYF+WL HYTTWLI  SI G+     + +         SA F +F+ LW T++ E WKR+ +   + WGM GFEE+++ R ++ G    S +DG+PM YF P + R R   S + IF+LIL+VIGAVA+ F  ++F  +  A  S
Sbjct:  149 LQPLYKKY-----GHKKIPFRGVDRIKLILSIIHASTTDGGCHLNITTLTLKNCLVTAYALHDEEEQEAVTKKWINWSSLPWQQPFSDIKDYYGEKVGLYFVWLGHYTTWLIGPSIVGIAMLVDIVIERTVDARLISA-FGLFMALWGTVYLESWKRRNSVVKLEWGMDGFEEEQEDRAEFDGEEVESPVDGRPMRYFSPAKQRSRVCASLIFIFMLILMVIGAVAAIFVFRYFARKGHALES 385          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A067D3J2_SAPPC (Anoct_dimer domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D3J2_SAPPC)

HSP 1 Score: 205 bits (521), Expect = 6.510e-58
Identity = 110/235 (46.81%), Postives = 145/235 (61.70%), Query Frame = 1
Query:   13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGN-DPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWF 714
            L+ +YKK   A    K+I FRG DR+KL+ SI+ A   D GC L+   L   +CL+  FPLHD  E   L  KW+R+   PWN+P  D+K+Y+GEK+GLYF+WL HYTTWLI  SI G    A + + G  D    G  +F +F+ LW T + E+WKR+ A   + WGM GFEE+E+ R +++G    S IDG  M YF P    KR L S ++IF LIL+VIGAVAS F  + F
Sbjct:  154 LQRVYKKYGPAG---KQIPFRGVDRIKLINSIIAAHLYDGGCALNTKMLEMKECLVTSFPLHDFDERDKLNAKWIRWSSAPWNQPYSDIKDYYGEKVGLYFVWLGHYTTWLIAPSIVGAVMLADIIMEGTVDARLLG--VFGLFMALWGTFYLEYWKRRNAVIRLEWGMDGFEEEEKDRAEFEGEEIESPIDGSKMRYFSPEVRTKRVLASLLLIFALILLVIGAVASIFVFRIF 383          
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Match: A0A1V9ZZN0_9STRA (Anoct_dimer domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZN0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.210e-56
Identity = 102/234 (43.59%), Postives = 151/234 (64.53%), Query Frame = 1
Query:   13 LESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDVLRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEKIGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGLWTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMDYFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWF 714
            L+++YKK       +K+  FRG DR+KL+ SI+ A   D GC+L++  L   +C++  F LH+  E  TL  KW+++   PW++P +++K+Y+GEK+GLYF+WL HYTTWLI  SI G    A + V G   ++   A+F IF+ LW T + E+WKR+ A   + WGM G+E++E  R +++G    S IDGKPM YF P   +KR L S + IF LI++VIGAVA+ F  ++F
Sbjct:  151 LQNVYKKY---GPKDKQTPFRGVDRIKLILSIIHAPVHDGGCHLNLKMLEMKECIVTSFALHNFEERDTLNDKWIKWSSLPWDQPYNEIKDYYGEKVGLYFVWLGHYTTWLIAPSIIGAIMLADIVVEGTV-DARFLALFGIFMALWGTFYLEYWKRRNAVVRLEWGMDGYEDEEHDRAEFEGEEIESPIDGKPMRYFNPEHQQKRILSSLLFIFALIVLVIGAVAAIFVFRYF 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57144.13168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ6_ECTSI8.610e-13080.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD27_9STRA1.970e-9460.00Calcium-activated chloride channel-domain-containi... [more]
A0A7S3GXB2_9STRA6.550e-7451.09Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A812UTJ6_SYMMI7.040e-6847.13Ano4 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A482SUW2_9ARCH1.120e-6748.66Anoct_dimer domain-containing protein n=1 Tax=arch... [more]
A0A6V2ZSX1_HETAK7.820e-6147.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A397ETC2_9STRA1.450e-5841.15Anoct_dimer domain-containing protein n=1 Tax=Apha... [more]
A0A024UWI9_9STRA5.790e-5842.80Anoct_dimer domain-containing protein n=2 Tax=Apha... [more]
A0A067D3J2_SAPPC6.510e-5846.81Anoct_dimer domain-containing protein n=1 Tax=Sapr... [more]
A0A1V9ZZN0_9STRA1.210e-5643.59Anoct_dimer domain-containing protein n=1 Tax=Thra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57144contigH-elongata_contig57144:272..3768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.0
Seed ortholog evalue1.3e-107
Seed eggNOG ortholog2880.D8LEZ6
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2514@1,KOG2514@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnoctamin
Ec32 orthologEc-21_006140.1
Exons5
Model size750
Cds size750
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57144.13168.1prot_H-elongata_contig57144.13168.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57144 272..3768 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930927.7568834-CDS-H-elongata_contig57144:271..4551622930927.7568834-CDS-H-elongata_contig57144:271..455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 272..455 -
1691679628.3709102-CDS-H-elongata_contig57144:271..4551691679628.3709102-CDS-H-elongata_contig57144:271..455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 272..455 -
1622930927.774157-CDS-H-elongata_contig57144:883..9911622930927.774157-CDS-H-elongata_contig57144:883..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 884..991 -
1691679628.3839233-CDS-H-elongata_contig57144:883..9911691679628.3839233-CDS-H-elongata_contig57144:883..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 884..991 -
1622930927.79074-CDS-H-elongata_contig57144:1422..15391622930927.79074-CDS-H-elongata_contig57144:1422..1539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 1423..1539 -
1691679628.3987389-CDS-H-elongata_contig57144:1422..15391691679628.3987389-CDS-H-elongata_contig57144:1422..1539Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 1423..1539 -
1622930927.8097775-CDS-H-elongata_contig57144:2370..24811622930927.8097775-CDS-H-elongata_contig57144:2370..2481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 2371..2481 -
1691679628.4089663-CDS-H-elongata_contig57144:2370..24811691679628.4089663-CDS-H-elongata_contig57144:2370..2481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 2371..2481 -
1622930927.8287117-CDS-H-elongata_contig57144:3538..37681622930927.8287117-CDS-H-elongata_contig57144:3538..3768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 3539..3768 -
1691679628.4167385-CDS-H-elongata_contig57144:3538..37681691679628.4167385-CDS-H-elongata_contig57144:3538..3768Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57144 3539..3768 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57144.13168.1

>prot_H-elongata_contig57144.13168.1 ID=prot_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
ERQELESLYKKQETANQGEKKIIFRGADRLKLLYSILVAKRTDMGCNLDV
LRLVKSKCLLAFFPLHDKVELRTLQIKWLRYFRFPWNEPTDDVKNYFGEK
IGLYFLWLAHYTTWLIPASIGGLFAWAQVAVNGNDPNSAGSAIFSIFIGL
WTTLFAEFWKRKQARCAMRWGMSGFEEQEQTRPQYQGIRSSSTIDGKPMD
YFPPLESRKRFLISQMIIFVLILVVIGAVASTFWLKWFLTQASARVSTL*
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mRNA from alignment at H-elongata_contig57144:272..3768-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57144.13168.1 ID=mRNA_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3497bp|location=Sequence derived from alignment at H-elongata_contig57144:272..3768- (Himanthalia elongata Himel1 dioecious)
GAACGACAAGAACTGGAGAGCCTTTACAAGAAACAGGAAACAGCCAATCA GGGAGAGAAGAAGATCATTTTCCGCGGTGCAGACCGCCTCAAGCTCTTGT ACAGCATCCTTGTGGCGAAGAGGACCGACATGGGCTGCAACCTAGACGTC CTCCGGCTCGTCAAGTCCAAGTGCCTCCTGGCGTTTTTCCCGCTCCACGA TAAGGTTGAGCTTCGAACCCTGCAGATCAAGTGAGTCGTGGCCTTCAAAG GTAGTCCGGGCATGTAATGAGTCTCCCGCGCTTCGCAGCAATCTCGAGGT GCTTGACCAGTCTGGTAGTGTTCTCAATAAATTTCCGGGATAAAAATCCA TCAATAGCTCTCTAGAGCTCTAGCAGAGTCCTAAAAATCGCGGTGCAACT AAACCTGTGGCTGGGCGTTACATAAGTGTGTCCTCATTCCTACTAAGCTG ATCCAGGGGTTCGAGCATCGGTGATCCTCATCTGGCAGTTTTTATTCTTC TTGAAAAGTCTGGATGATGAGAGGAGCTATGATCTACAGGCATACACACA AACAGAGAAAGACACACAAAACAGGGCCTACGCACTCCCGTGGGGTTACG GTGCTGGATAACAGGGCGACGGCCTTGGGGCGAGATTAATTCGATATTGC GGACTCCCGTGGTGCAGTAAGACGCAGTCGTCCATCGTTGATCGCGCTAC TGGTGATATACGGCGCAGGGGATTGGTTGTGTATGAGGCCTTGGAATGCT CCTGCTTCTCTCTATCGGTAGAGTTGTTTTTGCACGCATCGATAGCGCGC CCGTCTGTGGTGCTTCATCCCCGCTGTGCTTCTTCCATCGCGGAATCTCT AGCCCGATTCTGGAAATAATGAGTCTAGTTTCCCTATCGTTTATACTGTA TATATCGTCGAATCTATCGTTTGTTGTAGAAGAGACGGGAGCACACTGAC CATTCTCAGATGCAAAAACAACCATTCTCAGATGTAATATAAGGGTATGG GATAATGATGGAATTTTCCCCGACATTACACCGTTGATCCGATGAATTTA CTATTATTGGGGAACACGATTTATCATATGTATGTGACGATTTTGTGCTC AAAGGTAGTAATAATGTCCACATTCATCCGAACCTGACGATAGCTGGTCC CCTGGGCTGCACCTCTAATGGTGCTATGAACGCGTGCGGATGGTTTGAAT GATTTCATATGTTGTTATTTAAGGGAAAACAAGACACATAAAACAAACAA AAACAAAACGTTTGTAATATCTGATGGCTTGCCGAAGGTGGCTCCGGTAC TTTCGGTTCCCGTGGAACGAGCCCACGGATGACGTCAAGAACTACTTTGG CGAGAAGATCGGGCTTTACTTTCTTTGGCTGGCGCACTATACCACCTGGT ACGTGAGTCATCCTTGGAGGATATGGGGGAGCGGGCGGGGAGGGGGGGGG GTGGGCGAGTGGGCTAGAGACGTAGAAAAAGAAGAAAAGCCGCGGAAGCT TGAAACCCGTTGTCGCTTTTCTTGCTGAGATATTTTTTAAAATATATATG CTTCATCACGACGTAAACCGTTTTGCGTGCGCGGTCGAATCGTGGAAAAG CTGCTGGAGATTGCGCGCCAATGCGGAAGGCCTGTGTGAGGTGGTCGTCA TTAGAACCACTGACTGGGCAATGATGGCAATTAAAGTACCACTGACTGGG TAAAATTAGTGAATATTGACAATTAAAGTACCACTGACTGGGTAATGAGT ACACCGTAGGTAGTCTTGATAACATACCTTCTCCACCAACTGAAGAACTT GACCATCCCGGCGCCCAAGCGCAACAAGGCAACAAGGCAGATTCGATGAG GTCTAGAGTGTACCAAATCAAATAAGGTTCTTAGGCTCAAGCTTGTAGGA GCCTTGCAACATTCTACAAATAATATACGCCACCATTATCCTTTCTAATC GATAGTTTTCCCCTCAGGAATTCAGCGAGGGAAAAAATATTATATTTACT ACGCTCTTCTAATAACGGCTCAGCGGGATTCGTACCAAGTCCTACCGACG ACGCCAATTCGAGAAGAAGGTCGTCACCGTTTTTAAAAGACCACGAGGCA AAAATAATTTGACGGTTATGACTTGGAAACTACTCTATTCGTAGTGTAAT AGTGATAGTCATTACGGCACCCGGCTACCGTCTACCAACTCCCGGTGCGA TCTACCGCCGTCTGGCGCGTTGTGCCCAGGTTGATCCCAGCAAGCATCGG GGGACTCTTCGCCTGGGCGCAAGTGGCAGTAAACGGGAACGATCCGAACT CCGCCGGCTCAGCCATTTTCTCGATTTTTATTGGGCTCTGGACCACGTGA GAGGGAGAGGGAGGGAGGGAGGGGCTCGAGAGATGACGTCGAGTAGGGAA ATCCTTAGTAGCAAGAAGCTACTTCTCCTGTAGACACAAAACAATATTTT CCCTTCTTCTCTTTTTGTACGCAATTGTTTGGGATCATCCTAAACGAGGT GACGTGAGTCGACCTCATTGGTTAGAGCCAAAATCCACGCGGCGTCGCTC TACTGAAGAGCAATGTACTGCTAATATCCCCTGCATCAGTCACTCGGGGG CCACACGAGAGAGTCCGATTCGTTCTCGGCGTACGGTCACGCTGATATTT CTTGTTGCCTGCTGGTAAAAATCAGACGGCTTGATTTGCTAAGATATATT CAATTAAATATTGCACTCCAGGCTGATTGGCTTGTTTCGCCGGACGACGC AACACTGATTATTCCGACGACGAACAGGCTGTTCGCCGAGTTTTGGAAGA GAAAACAGGCGAGATGTGCCATGCGGTGGGGCATGTCCGGTTTTGAGGAA CAGGAGCAGACGAGGCCACAATACCAGGGCATCAGGTACCAGCGTCCTTG CCCCATGTGTACGTCATTATTGGGGACGACGTGAACGCGTTCGACGGTTA CTCGTTTAAGTCCTCCTTCGTGTACTCTTTAGCAAACCTTGAACAGCTTT TAAAGCGTTCGCTCTGAAAAGCATCCTTCAATATCATAACAAAAATATTT TCACAAGATCGGTGTTCGTTGGATGTGGCTTCGTGGGGGGTGCTGGGTCT CTTGTCCGCTATTTTTGAGGGATCCCGCCGAGCATCATGGTATCGATGTC CAGGCGTGGGGATCAAATGACACCCACACTAAAATAACTCCCCTAAGTGT GGGAAACTATCATAAGTTCCCCTGCACGACGAACCTTCAGTTTACACGAA GGGAATGAATAACTCGAAGATGCGTCCTCTTTGACGGCAATCGACGACAC CATCAATATCTAGGTCCTCCTCGACAATCGACGGCAAGCCGATGGACTAC TTCCCGCCCTTAGAGAGTCGGAAACGGTTCTTGATCAGTCAAATGATCAT ATTCGTTCTAATACTGGTGGTTATCGGGGCCGTCGCCTCCACATTCTGGC TCAAGTGGTTTCTGACACAGGCAAGCGCAAGGGTTTCCACTTTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig57144:272..3768-

>mRNA_H-elongata_contig57144.13168.1 ID=mRNA_H-elongata_contig57144.13168.1|Name=mRNA_H-elongata_contig57144.13168.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1500bp|location=Sequence derived from alignment at H-elongata_contig57144:272..3768- (Himanthalia elongata Himel1 dioecious)
GAACGACAAGAACTGGAGAGCCTTTACAAGAAACAGGAAACAGCCAATCA
GGGAGAGAAGAAGATCATTTTCCGCGGTGCAGACCGCCTCAAGCTCTTGT
ACAGCATCCTTGTGGCGAAGAGGACCGACATGGGCTGCAACCTAGACGTC
CTCCGGCTCGTCAAGTCCAAGTGCCTCCTGGCGTTTTTCCCGCTCCACGA
TAAGGTTGAGCTTCGAACCCTGCAGATCAAGAACGACAAGAACTGGAGAG
CCTTTACAAGAAACAGGAAACAGCCAATCAGGGAGAGAAGAAGATCATTT
TCCGCGGTGCAGACCGCCTCAAGCTCTTGTACAGCATCCTTGTGGCGAAG
AGGACCGACATGGGCTGCAACCTAGACGTCCTCCGGCTCGTCAAGTCCAA
GTGCCTCCTGGCGTTTTTCCCGCTCCACGATAAGGTTGAGCTTCGAACCC
TGCAGATCAAGTGGCTCCGGTACTTTCGGTTCCCGTGGAACGAGCCCACG
GATGACGTCAAGAACTACTTTGGCGAGAAGATCGGGCTTTACTTTCTTTG
GCTGGCGCACTATACCACCTGGTGGCTCCGGTACTTTCGGTTCCCGTGGA
ACGAGCCCACGGATGACGTCAAGAACTACTTTGGCGAGAAGATCGGGCTT
TACTTTCTTTGGCTGGCGCACTATACCACCTGGTTGATCCCAGCAAGCAT
CGGGGGACTCTTCGCCTGGGCGCAAGTGGCAGTAAACGGGAACGATCCGA
ACTCCGCCGGCTCAGCCATTTTCTCGATTTTTATTGGGCTCTGGACCACG
TTGATCCCAGCAAGCATCGGGGGACTCTTCGCCTGGGCGCAAGTGGCAGT
AAACGGGAACGATCCGAACTCCGCCGGCTCAGCCATTTTCTCGATTTTTA
TTGGGCTCTGGACCACGCTGTTCGCCGAGTTTTGGAAGAGAAAACAGGCG
AGATGTGCCATGCGGTGGGGCATGTCCGGTTTTGAGGAACAGGAGCAGAC
GAGGCCACAATACCAGGGCATCAGGCTGTTCGCCGAGTTTTGGAAGAGAA
AACAGGCGAGATGTGCCATGCGGTGGGGCATGTCCGGTTTTGAGGAACAG
GAGCAGACGAGGCCACAATACCAGGGCATCAGGTCCTCCTCGACAATCGA
CGGCAAGCCGATGGACTACTTCCCGCCCTTAGAGAGTCGGAAACGGTTCT
TGATCAGTCAAATGATCATATTCGTTCTAATACTGGTGGTTATCGGGGCC
GTCGCCTCCACATTCTGGCTCAAGTGGTTTCTGACACAGGCAAGCGCAAG
GGTTTCCACTTTGTAGGTCCTCCTCGACAATCGACGGCAAGCCGATGGAC
TACTTCCCGCCCTTAGAGAGTCGGAAACGGTTCTTGATCAGTCAAATGAT
CATATTCGTTCTAATACTGGTGGTTATCGGGGCCGTCGCCTCCACATTCT
GGCTCAAGTGGTTTCTGACACAGGCAAGCGCAAGGGTTTCCACTTTGTAG
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