mRNA_H-elongata_contig56604.13106.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: D8LCX2_ECTSI (Protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX2_ECTSI) HSP 1 Score: 272 bits (695), Expect = 1.060e-86 Identity = 132/153 (86.27%), Postives = 143/153 (93.46%), Query Frame = 1
Query: 1 EVVGMFTSRDLLSELARYPKKSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLDPKQNRAGWKQTFSASVGTVALPHPHKLSDGGVSANKREHR 459
EV+GMFTSRDLL ELARYP K+D L + +EFMIPL+RMIY+S KDSLYQCLLVMSELKVRNLPV++EGKVMGIVNVNDISDFSFSM ELGGKKAYMKNISQRKGLPKGVGLDP QNR+GWKQTFSASVG VALPHPHK++DGGVSANKREHR
Sbjct: 56 EVIGMFTSRDLLGELARYPNKADALKTRAHEFMIPLSRMIYASAKDSLYQCLLVMSELKVRNLPVIAEGKVMGIVNVNDISDFSFSMEELGGKKAYMKNISQRKGLPKGVGLDPGQNRSGWKQTFSASVGAVALPHPHKMTDGGVSANKREHR 208
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A6H5J6V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6V2_9PHAE) HSP 1 Score: 270 bits (691), Expect = 9.000e-84 Identity = 131/153 (85.62%), Postives = 143/153 (93.46%), Query Frame = 1
Query: 1 EVVGMFTSRDLLSELARYPKKSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLDPKQNRAGWKQTFSASVGTVALPHPHKLSDGGVSANKREHR 459
EV+GMFTSRDLL ELARYP K+D L + +EFMIPL+RMIY+S KDSLYQCLLVMSELKVRNLPV++EGKVMGIVNVNDISDFSFSM ELGGKKAY+KNISQRKGLPKGVGLDP QNR+GWKQTFSASVG VALPHPHK++DGGVSANKREHR
Sbjct: 299 EVIGMFTSRDLLGELARYPNKADALKTRAHEFMIPLSRMIYASAKDSLYQCLLVMSELKVRNLPVIAEGKVMGIVNVNDISDFSFSMEELGGKKAYIKNISQRKGLPKGVGLDPGQNRSGWKQTFSASVGAVALPHPHKMTDGGVSANKREHR 451
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A836CC85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC85_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.990e-37 Identity = 64/100 (64.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 1 EVVGMFTSRDLLSELARYPKKSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNI 300
+V+G+FT+RD+L LAR+P K+DGL +V+EFMIPL++MI S +DSLYQCLLVM+EL++RNLPV+++G+V GI+N NDISDF+FS +LGGKKAY+ NI
Sbjct: 81 KVIGLFTARDVLGVLARFPNKADGLAARVHEFMIPLSQMITCSPEDSLYQCLLVMTELRIRNLPVLADGQVGGIINSNDISDFTFSSEQLGGKKAYINNI 180
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A7S3XTX7_HETAK (Protein phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX7_HETAK) HSP 1 Score: 121 bits (304), Expect = 7.360e-30 Identity = 66/152 (43.42%), Postives = 95/152 (62.50%), Query Frame = 1
Query: 4 VVGMFTSRDLLSELARYPK--KSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLDPKQNRAGWKQTFSASVGTVALPHPHKLSDGGVSANKRE 453
VVG+FT+RD+L E+ + P+ + D IKV E MIPL ++IY + SL QC L+M E KVRNLPV+ +G+V+GI+ + DISD+SF + K+ ++ I RKG+P+G L + +VG ALPHP K DG V+ +KR+
Sbjct: 112 VVGLFTARDVLREVHQAPRGREQDAFGIKVSELMIPLAQLIYCRPEHSLKQCHLIMKECKVRNLPVLGDGEVLGILTIKDISDYSFQRLRVEWKQNKLEAIGARKGIPRGTALGGGLREPAALEKLRLAVGAAALPHPFKQPDG-VAFSKRQ 262
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: W7THC9_9STRA (Protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THC9_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.860e-27 Identity = 60/152 (39.47%), Postives = 95/152 (62.50%), Query Frame = 1
Query: 1 EVVGMFTSRDLLSELARYPKKSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLDPKQNRAGWKQTFSASVGTVALPHPHKLSDGGVSANKREH 456
EVVG+FT++D++ L++ K++ L V M P++R+IY S D+L + +M EL++R LPVV +G + GI+ + D+ + +S E+GGKKA++K ++ R GLP G + + G K++ VG ALPHP K DG V+A+ R H
Sbjct: 198 EVVGIFTAQDVIKTLSKQADKAEALQSLVKNAMTPMSRVIYCSPDDTLEKVQYIMVELQIRTLPVVKDGVIYGIITLGDVINHHYSSEEIGGKKAFIKGVAGRLGLPSGTQVASHVVKEGVKKSIKWKVGVAALPHPFKRRDG-VAASLRLH 348
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A7S3HES1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HES1_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.100e-23 Identity = 56/164 (34.15%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 1 EVVGMFTSRDLLSELARYPKKSDG--------LNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLDP-----KQNRAGWKQTF-SASVGTVALPHPHKLSDGGVSANKR 450
E++G+FT+RD+L + R+ SD K+ E M N ++Y S DS +C +M + K+RNLPV+ G+V GI+ +++D SF++ + GGKK ++ N++ R+GLP+G ++ +QNR+ + V + ALPHP K +G V+ ++R
Sbjct: 128 EILGIFTARDILKCIQRHYSSSDSRTRRDTFLAETKIKELMTTRNHLVYCSPSDSARRCREIMFQCKIRNLPVIDNGEVRGIITAKNLADASFNIIDTGGKKGFIHNVTGRRGLPEGTRINQDAIGSRQNRSPQQNMLLDMEVASFALPHPFKRPEG-VAMSRR 290
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A7S4QWX2_9STRA (Protein phosphatase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWX2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 4.790e-21 Identity = 57/159 (35.85%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 4 VVGMFTSRDLLSELARYPKKSDG----LNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGL--DPKQNRAGW---KQTFSASVGTVALPHPHKLSDGGVSANKRE 453
VVGM TSRDLL +A K ++G +N V FM P++++IY+ ++++ C +M++L ++ LPV+S G+V G+V D+SD+ + GGKK Y+++IS+R GL + P RA ++ +VG +PHP K GG N R+
Sbjct: 197 VVGMTTSRDLLRMMAAGFKNNEGAEEVMNKTVGNFMTPISQVIYARPEETVGTCRAIMAKLGIKCLPVLSHGRVEGLVTARDMSDYGVEAKDRGGKKNYLRDISERVGLSSNTSMAEPPTYLRAHLALEQKPLFMNVGVAEMPHPFKTGGGGCGMNARD 355
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A7S2EN97_TRICV (Protein phosphatase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN97_TRICV) HSP 1 Score: 98.2 bits (243), Expect = 5.270e-21 Identity = 58/159 (36.48%), Postives = 95/159 (59.75%), Query Frame = 1
Query: 4 VVGMFTSRDLLSELA---RYPKKSDGL-NIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGL--DPKQNRAGW---KQTFSASVGTVALPHPHKLSDGGVSANKRE 453
VVGM TSRDLL ++ + K +D L +K+ EFM P++++IY+ +++ C VM++L V+ LP++S+G+V G++ D+S+F E GGKK Y+K++S+R GL + P RA ++ +VG +PHP K +DG N+R+
Sbjct: 217 VVGMTTSRDLLRVMSAGFKDGKHADELMEVKINEFMTPISQVIYARPDETIGMCRTVMAKLGVKCLPILSQGRVEGLITARDMSEFGMDAKERGGKKHYLKHVSERVGLSSNTSMAEPPSYLRAHLALQQRPLFVNVGVSEMPHPFKTADG-CGMNRRD 374
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A482RSQ1_9ARCH (CBS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSQ1_9ARCH) HSP 1 Score: 97.8 bits (242), Expect = 8.590e-21 Identity = 56/165 (33.94%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 4 VVGMFTSRDLLSEL-ARYPKKSDGLN-----IKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGVGLD--------PKQNRAGWKQTFSASVGTVALPHPHKLSDGGVSANKREH 456
V+G+FT+RDLL + A GLN KV E M ++++ S D++ +C +M + K+RN+PV+ +G V GI+ + ++D SF++ ++GGKK ++ N++ R+GLP V + P + A A +G ALPHP K ++GGV+ ++R +
Sbjct: 127 VLGIFTARDLLKFIKATISANPRGLNESMTSTKVTEVMTRREKLVHCSPDDTVKRCREIMFQCKIRNMPVIEDGIVKGILTMKLLADSSFNLQDIGGKKGFIHNVTGRRGLPDSVKVQKISTVIEGPGGSGAVAITKLDAEIGMFALPHPFKRAEGGVAMDRRHY 291
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Match: A0A7R9YG47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG47_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.410e-19 Identity = 53/179 (29.61%), Postives = 96/179 (53.63%), Query Frame = 1
Query: 4 VVGMFTSRDLLSELARYPKKSDG--LNIKVYEFMIPLNRMIYSSMKDSLYQCLLVMSELKVRNLPVVSEGKVMGIVNVNDISDFSFSMTELGGKKAYMKNISQRKGLPKGV--GLDPKQNRA-----GWKQTFSASVGT-------------------VALPHPHKLSDGGVSANKREH 456
++G+ T+RD+L L + + L + + E P + ++Y+ DSL +C ++MSE ++RNLPVV + ++G++ D+ D+S+ +LGGK +++++I+ R+GLP V +D ++ RA + F + +G V LPHP K +DG V + R+H
Sbjct: 70 LLGLVTARDILRALGKTDAQMQEAPLAVPLEEVATPADSLVYAKATDSLARCHIIMSERRIRNLPVVHDNTIVGLITAKDLMDYSYDPQQLGGKASFIRHIAGRRGLPPNVRVAVDAEEERAEVSPDAKESMFLSFLGAPQKTQMDMVPPRIYVQAAAVMLPHPFKKADGFVGESLRDH 248 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56604.13106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56604.13106.1 >prot_H-elongata_contig56604.13106.1 ID=prot_H-elongata_contig56604.13106.1|Name=mRNA_H-elongata_contig56604.13106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp MFTSRDLLSELARYPKKSDGLNIKVYEFMIPLNRMIYSSMKDSLYQCLLVback to top mRNA from alignment at H-elongata_contig56604:248..3039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56604.13106.1 ID=mRNA_H-elongata_contig56604.13106.1|Name=mRNA_H-elongata_contig56604.13106.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2792bp|location=Sequence derived from alignment at H-elongata_contig56604:248..3039- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56604:248..3039- >mRNA_H-elongata_contig56604.13106.1 ID=mRNA_H-elongata_contig56604.13106.1|Name=mRNA_H-elongata_contig56604.13106.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig56604:248..3039- (Himanthalia elongata Himel1 dioecious)back to top |