mRNA_H-elongata_contig56077.13044.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: D7FJF1_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF1_ECTSI) HSP 1 Score: 328 bits (840), Expect = 5.990e-104 Identity = 205/455 (45.05%), Postives = 248/455 (54.51%), Query Frame = 1
Query: 205 GLHLVLVEPQAICSSTPSGRLFLGTQKAAQNRILLLSHGISSIICVGTPAFHQ------EAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLP--------------GGR-------------SSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAV-AATRGKKKETPRSACRDY---INEGMDKGPVASTCARKSMD-----MCTSVFTEPLDWIKTCPR---------VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIER 1416
GL+LV+ E A RLF+GTQKAAQ+R LL H +S I+CVGTPAFHQ + G YLE+ +LDLPSENLL RLD VSF+ + M R + VLVNCV+AQSRS VVAAYLM+ KG ++QA+ V+ AQPTVHINPGF+AQL LY DLGCRLP GGR S T+ VWA ATYRWFL A GL FG + G +H G+ ++RCK CR PLF + NV++H HP+V+AASDST+ASF HGDGSSW+ RDA A G K R A + + G + C + + MCTSVFTE LDW+ R GKI CPG KG+ CG KLGAWSL+G +CSCG V+PA +F LSRIER
Sbjct: 5 GLYLVVPEKGA--------RLFVGTQKAAQDRSLLRRHRVSRIVCVGTPAFHQGDDDEVHSNGSKNISYLEVDILDLPSENLLGRLDSCVSFIEEGMSREENVLVNCVYAQSRSPTVVAAYLMRLKGLSVAQAIELVQEAQPTVHINPGFQAQLDLYSDLGCRLPATKKVEIGPTAPSAGGRGVAPEEPIGISQESKPSTNTTTVWAAATYRWFLFACGLNLGGGFGG------------------------EGGHNGAFHGGE----------GCGRLYRCKACRAPLFRDSNVLDHLHPVVQAASDSTFASFSKHGDGSSWIKARDAADIAAAGSTKTVVRGAKGRHDPTVRRGGGATHSNNNCGKSVVSSAGKGMCTSVFTEALDWVVVADRGRHSGHFAHSSGKICCPGKKGT--VVCGSKLGAWSLDGINCSCGRLVKPAFQFTLSRIER 415
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A1R1XV46_9FUNG (Protein-tyrosine-phosphatase n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XV46_9FUNG) HSP 1 Score: 118 bits (295), Expect = 2.300e-25 Identity = 94/349 (26.93%), Postives = 155/349 (44.41%), Query Frame = 1
Query: 385 FEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRS--SAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQ----GKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPRVEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIE 1413
F Y+ I +DLP+ NLL ++ F+ +S+++ K +L++C QSRS + AAY+MK++ + +AL +++ +P H N GF QL LY DL ++ S + + +G ++ + + K S + SS + + S+ + D D V Q G + + + RCK CR LFT N+I H +DS G+ T KK RD+ N P + + +CTS FTEP++W++T G+I CP C KLG ++ +G+ CSCG + P+ + + S I+
Sbjct: 61 FNYMVISEMDLPTVNLLQYFNQTYDFISNSVKQNKKILIHCAAGQSRSITIAAAYIMKERNIKVHEALEYIKKKRPQAHPNRGFINQLRLYYDLEFQIDPQNSIYRKFVNSLAQKSGNLHQIIPADDPEKARVSASNAQKSSGNGVTVSSGAQNSSAIDGDSSEVASSGSQQAGSGANMLEAISKVMNQPKMARCKKCRRHLFTADNIIPH----EPKKADSVNRIIDESGN------------VTYIKKN------MRDFSNR-----PDHNRNEKTGRQLCTSAFTEPMEWMQTAGENSGRIVCP--------TCQSKLGQYNWSGSQCSCGKWITPSFKILYSHID 374
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A8C4TUT1_FALTI (Protein-tyrosine-phosphatase n=7 Tax=Falco TaxID=8952 RepID=A0A8C4TUT1_FALTI) HSP 1 Score: 105 bits (263), Expect = 1.810e-21 Identity = 101/389 (25.96%), Postives = 162/389 (41.65%), Query Frame = 1
Query: 265 LFLGTQKAAQNRILLLSHGISSIICVGTPAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPR--VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIERGRS 1425
L++G ++ + L + G+ +++ V +E + ++ D P +LL+RLDE +F+ + G LV C SRS AV AAYLMK +G +A A VR A+P +NPGF+AQL LY+ +GC + RSSA+ YR + LRS + RD + + + P +T+ ++RC+ CR LF ++++H G G + A + + + + + +G DK CTS F EP+ W++ +EG++ CP C KLG++S G CSCG V PA + SR++ +S
Sbjct: 30 LYVGGAESCSSPEALAAAGVVAVLTVDA----EEPPAVPGVRAMHVRARDEPGADLLSRLDECAAFLGAARAGGGAALVRCQAGLSRSVAVAAAYLMKTEGLGWEEAYAAVRAAKPDAEVNPGFQAQLKLYEAMGCAVD--RSSAL-----------YRRYR-------------LRSLAE--------------RDPELQDLPREVFAVDPTILCQTP--NTEVLYRCRKCRRALFRSSSILSHT-----------------EGSGPAAFAHKRVMDSAQLRV-------------DGRDK--------------CTSYFIEPVQWMEPALLGVMEGQLLCP--------KCTSKLGSFSWQGEQCSCGRWVTPAFQVHKSRVDEVKS 320
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A2T9YJS4_9FUNG (Protein-tyrosine-phosphatase n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YJS4_9FUNG) HSP 1 Score: 104 bits (259), Expect = 8.160e-21 Identity = 109/404 (26.98%), Postives = 167/404 (41.34%), Query Frame = 1
Query: 265 LFLGTQKAAQNRILLLSHGISSIICVGTPAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQR---EPPKFSTQAV------------FRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPR--VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIERGRS 1425
+++G A N L + GI++II + P F D FEYL I LDLP+ N++ ++ +F+ DS+ + +LV+CV QSRS A+ AAY +K+ G + +AL ++ +P + N GF QL LY +L ++ YR F+++ K G L + + ED + VL Q K +AQ +P + S Q +CK CR L +E N+ H G G+ ++ N G + V A K + C+S+F EP+ WIK + GKI CP C KLG +S G+ CSCG V P+ + S+I+ R+
Sbjct: 20 IYVGGTLAESNIEGLKTAGITNIISI-VPNFKPSHPKD--FEYLIIDELDLPTTNIIQHFNQTTNFIKDSVVQNCKILVHCVAGQSRSVAITAAYFIKENGLSVDKALGLIKENRPQSNPNYGFVEQLNLYIELNFKVDSSED-------------LYRRFVNSIAHKKFEENGYLENPMIA---------------EDPLLVL----QNKQKAQNSIMKPGEGSNQLQVVNNGIIKREIGIKCKKCRRLLLSESNIFEHE-----------------AGPGNIGFSYTKVN-------------------NFGAEA--VGGNMAGKPKNNCSSIFFEPISWIKDIHSGVISGKIMCP--------KCDTKLGQFSWAGSKCSCGKWVTPSFQIHNSKIDYPRN 342
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A7K4L6X9_9AVES (Protein-tyrosine-phosphatase (Fragment) n=2 Tax=Crypturellus TaxID=48395 RepID=A0A7K4L6X9_9AVES) HSP 1 Score: 100 bits (250), Expect = 8.310e-20 Identity = 89/346 (25.72%), Postives = 136/346 (39.31%), Query Frame = 1
Query: 394 LEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKF----STQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPR--VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIE 1413
L ++ D P +LL+ LD+ +F+ + G LV C SRSAAV AYLMK +G +A VR A+P + +NPGF+AQL LY+ +GC + ++ YR + +K L + F A +P +T+ ++RC+ CR LF ++++H G G + A + +T+ N G DK CTS F EP+ W++ +EG++ CP C KLG++S G CSCG V PA + SR++
Sbjct: 54 LHVRAQDEPGADLLSHLDDCAAFIAAARAAGGAALVCCTAGVSRSAAVAIAYLMKSEGLRWEEAYTAVRAAKPDIGVNPGFEAQLRLYEAMGCSVD----------VSSPHYKQYRLQVVT----------------------------------EKYPKLQDLPREVFAA--DPTNICQTSNTEILYRCRKCRRSLFRSSSILSHV-----------------EGSGPTAFAHKKITDSTQ-------------LYNHGYDK--------------CTSYFIEPVQWMEPILLGVMEGQLLCP--------KCTSKLGSFSWQGEQCSCGRWVTPAFQIHKSRVD 301
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A163J6H2_ABSGL (Protein-tyrosine-phosphatase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163J6H2_ABSGL) HSP 1 Score: 100 bits (250), Expect = 1.230e-19 Identity = 100/393 (25.45%), Postives = 157/393 (39.95%), Query Frame = 1
Query: 262 RLFLGTQKAAQNRILLLSHGISSIICVGTPAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQRE--PPKFSTQAVF---RCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDW---IKTCPRVEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIER 1416
RLF+G AA++ L +S ++ +G F Y I + DLP EN++ DE F+ ++ G GVL++C SRSA V AAY+M++ +AL+ ++ + V N GF AQL LY+ L + A YR FL + + D+ + D+ A E PP + F RCK CR L +VI H + S+ SS L D + T S +N+ ++ A A +S C+S F EP++W ++ ++G+I CP C KLGA++ +G CSCG + PA +++++
Sbjct: 10 RLFVGDCIAAEDLTQLQGDKVSHVVALGGYDFDHPG-----LIYKNIDIEDLPKENIIQHFDETFDFIEEARSTGTGVLIHCQAGMSRSATVAAAYMMRKGNIGHEKALSMIKSRRSFVAPNEGFLAQLELYESLNYEVDQKH-------------AAYRRFLLDSMV-------------------------------DEYNIYDQMENFALAADPEHTPPSGPSTLPFVSLRCKKCRRTLVHAEHVIEH-----KPGKGQQAFSYLKR---SSELNVTDVAT-----QPSTEASMAGTQVNKALNPLLAALASANQS---CSSYFIEPMEWMGRLQDSGEIQGRIDCP--------KCYCKLGAYNWSGEQCSCGRWITPAFMLHRNKVDQ 329
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A1X2H399_SYNRA (Protein-tyrosine-phosphatase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H399_SYNRA) HSP 1 Score: 98.2 bits (243), Expect = 9.700e-19 Identity = 98/387 (25.32%), Postives = 155/387 (40.05%), Query Frame = 1
Query: 265 LFLGTQKAAQNRILLLSHGISSIICVGT-PAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCP--RVEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIER 1416
L++G+ AA + L + GI+ I+ +G H+ EY + +LD+P N++ +E ++ + + G V V+C SRSA V+AAYLMK S+A+A +R +P V NPGF QL LY L + A YR FL + + G + + SS D GK RCK CR L ++++H ++ F+ D S + A+T + S + P+ ++ + + + C+S F EP+ WI RVEG+I CP C KLG ++ +G CSCG + PA +I++
Sbjct: 12 LYIGSCAAASSADALKTCGITHILSLGEFTKVHEH------LEYKNVDVLDIPEANIMQHFNETFDYIDQAHKSGGHVFVHCQAGVSRSATVLAAYLMKAHNLEPSEAIARIRAQRPCVSPNPGFLHQLDLYHRLKYDVDPRH-------------ADYRRFLVISMAREQQDTGYITNLSSL------------------AADPDTQRGGK--------------ALRCKKCRRVLALAEHMVDH----QAGPGQQAFSYFKR--DASINHSMVTDSASTASGSSSSNNSEAATAVPRAQPLNPLLASLSANA-NKCSSFFIEPMGWITGLNDGRVEGRIECP--------KCYCKLGQYNWSGAQCSCGRWIAPAFMLHQKQIDQ 332
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A1S4BXJ7_TOBAC (Protein-tyrosine-phosphatase n=8 Tax=Solanaceae TaxID=4070 RepID=A0A1S4BXJ7_TOBAC) HSP 1 Score: 96.7 bits (239), Expect = 4.380e-18 Identity = 93/354 (26.27%), Postives = 143/354 (40.40%), Query Frame = 1
Query: 361 QEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWA-GATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPR--VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIE 1413
+ AG D F + L D+ +ENLL LD + F+ S + G VLV+C SRSAA++AAYLMK + A+ VR++ V N GF QL +++++G ++ +S I ++ G +Y + K G S S S T+ T R V+RCK CR + +GNV++H G+G + W + K + D C+SVF EPL W++T +EGK+ C A C +LG ++ +G CSCG+ + PA + SR++
Sbjct: 89 EHAGKDLKFVRMAAPLRDMENENLLDSLDACLDFIEQSRKEGS-VLVHCFAGVSRSAAIIAAYLMKTEQLSQEDAIESVRQSCEFVCPNDGFLDQLKMFEEMGFKVD--NASPIYKRFHLKVLGDSYNRGERIDTSKFGADPGSATESIPSDVDVSLTKETAPAR-----------------------------VYRCKKCRRVVALQGNVVDHV-----------------PGEGETAFQWHKRRSGNPFNKPD----------------------------DECSSVFVEPLKWMRTVEEGALEGKLLC--------AHCEARLGYFNWSGIQCSCGSWITPAFQLHKSRVD 357
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A851TFK0_9AVES (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Nothocercus nigrocapillus TaxID=1977171 RepID=A0A851TFK0_9AVES) HSP 1 Score: 94.4 bits (233), Expect = 1.430e-17 Identity = 96/389 (24.68%), Postives = 148/389 (38.05%), Query Frame = 1
Query: 265 LFLGTQKAAQNRILLLSHGISSIICVGTPAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSATRCTGNVRDEDKMGVLDRYHQGKFEAQREPPKF----STQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKETPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDWIKTCPR--VEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIE 1413
L++G ++ + L G+ ++I VG G L ++ D S +LL+RLD+ +F+ SRSAAV AYLMK +G +A A VR A+P V +NPGF+AQL LY+ +GC ++V + R+ L +K L + F A +P T+ ++RC+ CR LF ++++H G G + + +T+ N G DK CTS F EP+ W++ +EG++ CP C KLG++S G CSCG V PA + SR++
Sbjct: 12 LYVGGAESCVSPEALAVAGVVAVITVGAEEVALPPPPAG-LRTLHVRARDEASADLLSRLDDCAAFIAAXXXXXXXXXXXXAAGVSRSAAVATAYLMKSEGLRWEEAYAAVRAAKPDVGVNPGFEAQLRLYEAMGCS------------VDVSSPLYKRYRLQVV--------------------------------TEKYRELQDLPREVFAA--DPTSMCQTSDTEVLYRCRKCRRSLFRSSSILSHM-----------------EGSGPTAFTHKRITDSTQ-------------LHNHGCDK--------------CTSYFIEPVQWMEPVLLGVMEGQLLCP--------KCTSKLGSFSWQGEQCSCGRWVTPAFQIHKSRVD 301
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Match: A0A8K0XNN3_9AGAM (Phosphatases II n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0XNN3_9AGAM) HSP 1 Score: 93.6 bits (231), Expect = 6.060e-17 Identity = 102/400 (25.50%), Postives = 172/400 (43.00%), Query Frame = 1
Query: 265 LFLGTQKAAQNRILLLSHGISSIIC--VGTPAFHQEAGGDGTFEYLEIQLLDLPSENLLTRLDEAVSFVWDSMRRGKGVLVNCVFAQSRSAAVVAAYLMKQKGCLLSQALAEVRRAQPTVHINPGFKAQLTLYQDLGCRLPGGRSSAITDGINVWAGATYRWFLSANGLKNSHSFGPLRSSSSSXXSNSAT----RCTGNVRDEDKM---GVLDRYHQGKFEAQREPPKFSTQAVFRCKICRHPLFTEGNVINHFHPLVRAASDSTYASFRGHGDGSSWLAWRDAVAATRGKKKE-----TPRSACRDYINEGMDKGPVASTCARKSMDMCTSVFTEPLDW---IKTCPRVEGKITCPGVKGSGGAACGGKLGAWSLNGTDCSCGATVRPAVRFILSRIE 1413
L++G +A N L I SI+ +G + H+ TF +I ++D E++L+ L A++F+ + +G+GVLV+CV SRSA +VAAYLM +G ++AL +R+ +P V N GF QL ++ G ++ S++ D + T +S G+ ++ F S++ T C ++ + M G++D + K Q +T +I E NV + HP+ S +S SS L A++A + +P + + N + P S + C+ F EPL W + ++EGKI CP ++ C KLG++ G C C V P S+++
Sbjct: 8 LWIGDLPSALNTEYLREKNIHSIVTATIGKYSIHE------TFVRHQIDIVDNVDEDILSHLVSAITFIQKELDKGRGVLVHCVAGISRSATIVAAYLMYSRGLDPTEALKLMRQHRPQVDPNDGFLRQLDIFHKNGYQV----SASDKDTRAFFLQRTKNQVISNEGVLSTDHFADGTSNTLKGSPRRRTLRCKMCRHHLATREHMVGHGLIDEEEETK---QAVKVDLNTAEKLGEQISESISTAEANVSQNSHPVPPVVHPSPPSS-------SSPLVHPSAISAQLYANPQLAALRSPIALPASFRNATLSPPPSPSRTILAN-PKCSGYFVEPLKWMGPLLESGQMEGKIVCPNMR------CKAKLGSFDWTGVCCGCKEWVVPGFCIHRSKVD 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56077.13044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56077.13044.1 >prot_H-elongata_contig56077.13044.1 ID=prot_H-elongata_contig56077.13044.1|Name=mRNA_H-elongata_contig56077.13044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=440bp MMEGLVQRPKSLIAAEGERPRGFDPSCSTEQGLHLVLVEPQAICSSTPSGback to top mRNA from alignment at H-elongata_contig56077:2..2333- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56077.13044.1 ID=mRNA_H-elongata_contig56077.13044.1|Name=mRNA_H-elongata_contig56077.13044.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2332bp|location=Sequence derived from alignment at H-elongata_contig56077:2..2333- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56077:2..2333- >mRNA_H-elongata_contig56077.13044.1 ID=mRNA_H-elongata_contig56077.13044.1|Name=mRNA_H-elongata_contig56077.13044.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2640bp|location=Sequence derived from alignment at H-elongata_contig56077:2..2333- (Himanthalia elongata Himel1 dioecious)back to top |