mRNA_H-elongata_contig5605.13038.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: D7FSK5_ECTSI (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK5_ECTSI) HSP 1 Score: 176 bits (445), Expect = 1.190e-50 Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 37 QVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
Q + C WYRFK TLHEDMARAD+V+SHAGAGSVMEALG+GKALVVVVN ALMDNHQ ELA+ALA+R YLRATTPE LA L E DDSPSAR PYP +P+AFAA+VDEEM
Sbjct: 55 QTALDCRWYRFKQTLHEDMARADVVVSHAGAGSVMEALGLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEM 165
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: A0A835ZKP1_9STRA (Glycosyltransferase family 28 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP1_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.110e-28 Identity = 66/113 (58.41%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 34 RQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQP-QPQAFAALVDEEM 369
R+ GM YRFKPTL EDMARAD++ISHAGAGS+MEAL + K LVVVVN ALM NHQ ELA A+AER + A TP LAR L+ D+ +A PYP P + AF +++EE+
Sbjct: 101 RRCGMHVSCYRFKPTLAEDMARADLIISHAGAGSIMEALTLAKPLVVVVNDALMGNHQSELARAMAERCHALAATPPRLARALSA--DALAALRPYPPPPRADAFLLVLNEEV 211
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: A0A6H5KMF7_9PHAE (Glyco_tran_28_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF7_9PHAE) HSP 1 Score: 112 bits (280), Expect = 2.430e-27 Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 151 GMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
G+GKALVVVVN ALMDNHQ ELA+ALA+R YLRATTPE LA L E DDSPSAR PYP +P+AFAA+VDEEM
Sbjct: 6 GLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEM 78
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: A0A550CAN5_9AGAR (UDP-N-acetylglucosamine transferase subunit ALG13 (Fragment) n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550CAN5_9AGAR) HSP 1 Score: 113 bits (283), Expect = 1.080e-26 Identity = 55/109 (50.46%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 43 GMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
G+R E+YRFKP+L ED RAD++ISHAG+G++++ L + K L+VV N L+DNHQ ELAEAL ++G+LRA+TP LAR + F+ P++ P+P F+ ++DEEM
Sbjct: 64 GVRQEYYRFKPSLREDYERADLIISHAGSGTILDVLRVPKPLIVVPNPTLLDNHQQELAEALEQQGHLRASTPGTLARDIEGFN--PTSLVPFPPFDGSRFSRILDEEM 170
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: UPI0004416BD3 (glycosyl transferase n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416BD3) HSP 1 Score: 111 bits (278), Expect = 6.060e-26 Identity = 56/116 (48.28%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 22 VRLMRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
VR++ G+R E +RFKP+L ED AD+VISHAG+G+++E L MGK L+VV N+ LMD+HQ ELA L + GYL+A+T +AR +A+F+ S P+P P+ F++L+++EM
Sbjct: 59 VRVIETGGLRIEQFRFKPSLEEDFRSADLVISHAGSGTILEVLRMGKPLIVVPNSTLMDDHQTELAVKLDQLGYLKASTVSDIARAIADFNASEIV--PFPGFTPERFSSLLNKEM 172
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: A0A8H4QQX0_9AGAR (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QQX0_9AGAR) HSP 1 Score: 110 bits (276), Expect = 1.120e-25 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 31 MRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDE 363
M + G+ E+Y+FKP+L ED RAD+VISHAG+G++++ MGK ++VV N L+DNHQ ELA AL E GYL+ATT + LA+T+ +FD S P+P FA +VDE
Sbjct: 59 MSRAGVDIEFYKFKPSLQEDYDRADLVISHAGSGTILDVRRMGKPMIVVPNPTLLDNHQAELASALEEMGYLKATTVDGLAQTIKDFDASKIK--PFPPFNGSRFAKIVDE 167
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: A0A2H3DN98_ARMGA (UDP-N-acetylglucosamine transferase subunit ALG13 n=3 Tax=Armillaria TaxID=47424 RepID=A0A2H3DN98_ARMGA) HSP 1 Score: 110 bits (275), Expect = 1.520e-25 Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 31 MRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
++Q + E Y+FKP+L D RADMVISHAG+G++++ L +GK L+VV N L+DNHQ ELAEAL E G+LR++T LA T+ FD S A +P P F LVDEEM
Sbjct: 59 IQQQHVTVEMYKFKPSLEADYERADMVISHAGSGTILDVLRLGKPLIVVPNPTLLDNHQEELAEALEELGHLRSSTVSDLAHTIETFDRS--AIVKFPPQDPSRFRRLVDEEM 169
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: W7U1N7_9STRA (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1N7_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.860e-25 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 13 TSSVRLMRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
++S ++ + WYR+K +L DM AD++ISHAGAGSVME L +GKAL+VVVNTALMD+HQ ELA A+ ++GYL AT P + L +D + P P P AL+D+EM
Sbjct: 96 STSGQIRGNEAVSVSWYRYKDSLRADMEAADLIISHAGAGSVMEGLNLGKALLVVVNTALMDDHQQELAHAMQKKGYLVATEPNGVVGMLQNYDQWQRSLILRPSPTPGLIPALLDQEM 214
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: D8PWT7_SCHCM (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PWT7_SCHCM) HSP 1 Score: 109 bits (273), Expect = 3.040e-25 Identity = 58/123 (47.15%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 1 LSDVTSSVRLMRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
L + SVR R G+ E+Y+FKP+L ED RAD+VISHAG+G++++ L + K LV+V N L+DNHQ ELA+ L ++ +L A+TPE LAR +A FD + + P+P FA ++DEEM
Sbjct: 51 LHEAAISVRT-RSHGIEQEYYKFKPSLREDYERADLVISHAGSGTILDVLRIPKPLVIVPNPTLLDNHQQELADVLEQQRHLVASTPETLARDIASFDAT--SLVPFPPFDGSRFARILDEEM 170
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Match: UPI001C7C43C3 (uncharacterized protein n=1 Tax=Guyanagaster necrorhizus MCA 3950 TaxID=1450536 RepID=UPI001C7C43C3) HSP 1 Score: 109 bits (272), Expect = 4.130e-25 Identity = 57/112 (50.89%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 34 RQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVNTALMDNHQVELAEALAERGYLRATTPEVLARTLAEFDDSPSARTPYPQPQPQAFAALVDEEM 369
+Q + E Y+FKP+L D RADMVISHAG+G++++ L +GK L+VV N L+DNHQ ELA AL E G+LR++T LART+ EFD + A +P P F L+DEEM
Sbjct: 60 QQQNVTIEMYKFKPSLDSDYERADMVISHAGSGTILDVLRLGKPLIVVPNPTLLDNHQEELATALEELGHLRSSTVPGLARTIEEFDRA--AIVEFPPLDPSRFRRLLDEEM 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5605.13038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5605.13038.1 >prot_H-elongata_contig5605.13038.1 ID=prot_H-elongata_contig5605.13038.1|Name=mRNA_H-elongata_contig5605.13038.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp MRQVGMRCEWYRFKPTLHEDMARADMVISHAGAGSVMEALGMGKALVVVVback to top mRNA from alignment at H-elongata_contig5605:1360..2924+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5605.13038.1 ID=mRNA_H-elongata_contig5605.13038.1|Name=mRNA_H-elongata_contig5605.13038.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1565bp|location=Sequence derived from alignment at H-elongata_contig5605:1360..2924+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5605:1360..2924+ >mRNA_H-elongata_contig5605.13038.1 ID=mRNA_H-elongata_contig5605.13038.1|Name=mRNA_H-elongata_contig5605.13038.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig5605:1360..2924+ (Himanthalia elongata Himel1 dioecious)back to top |