mRNA_H-elongata_contig54442.12825.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig54442.12825.1
Unique NamemRNA_H-elongata_contig54442.12825.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.550e-73
Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 2
Query:  665 AIREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 1276
            +IR G+KE++++PHVF  RPEFLMI+GVY+ TY  AN + TTCE  +V+  WP+F+ TSAVN+ SC+AKD  FTRMF +  P  +P STY LFT RD  TV ASFN+P P S+++Q + G+SK  AD TAQ+ACPA +Q  STPL+L+G+DLYN+P S+A+ R  F+ S+YTSS+  R+ R GPAFGIGGVGNTAFRK   + F
Sbjct:   75 SIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG)

HSP 1 Score: 207 bits (527), Expect = 9.200e-58
Identity = 104/197 (52.79%), Postives = 130/197 (65.99%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 1258
            I++G + + LKPH F +  +FL I+GVY  TYVAAN I TTCE ++++ T PKF GT+A N+A C+ KD  FTRMF TV     P  +Y LF ARD +TVAASFN P   S Y+Q+    +K TAD+ AQL CPA +Q  STPL+LLG+DLYN  N     R   I  EY  S + R++R GPAFGIGGVGNT  R 
Sbjct:   24 IKQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTVAASFNAPQLVSHYLQKHNISTKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG)

HSP 1 Score: 195 bits (495), Expect = 3.140e-52
Identity = 94/197 (47.72%), Postives = 131/197 (66.50%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGI-SKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFR 1255
            +R+G++ ++++PH F   P+F +I G+Y  TY+ AN + TTCE  +   + PKF+ T+ VN++ C+ KD  FTRMF     RP+P +TY LF +RD +TVAASFN P+  S  +     +  K++ADV AQLACPA +Q  STP++LLG+DLYN P  SA  R   +  EY  S I R++R GPAFGIGG+GN  FR
Sbjct:   84 LRQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDALTVAASFNAPEVVSATLLRYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A8H7S7R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S7R9_9FUNG)

HSP 1 Score: 188 bits (478), Expect = 1.370e-50
Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDT---WPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 1261
            I +G K +I +P  F    +F +++G+Y  TY+ AN++ T  E+  +  T   W KFI TS +N+  C+ KD  FTRMF     R +P  TYL F ARD MTVAASFN P   + ++QE + + ++ + VTAQLACPA IQ  STP++LLG+DLYN PN+++  R   I  EY  S + RV R GPAFGIGGVGNT FR +
Sbjct:   54 IVQGFKTIITRPLQFAGSTQFRLVFGLYFGTYLTANVVDTANEQLGITGTTAAWYKFIATSVMNMGVCIYKDRTFTRMFGVTTTRALPKFTYLCFAARDSMTVAASFNAPTYFASWLQENYSMDQRNSKVTAQLACPALIQFISTPIHLLGLDLYNRPNATSNQRVGLIRKEYFKSALARVGRIGPAFGIGGVGNTYFRGF 254          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A8H7U8D9_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U8D9_MORIS)

HSP 1 Score: 188 bits (477), Expect = 3.500e-50
Identity = 98/203 (48.28%), Postives = 131/203 (64.53%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCE---RSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGI--SKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 1261
            +++G    +  PH F +  +F +++ +Y  TY+ AN+I TT E   R   E    KF+GT+AVN+ +C+ KD  FTRMF TV  +P+P  +YLLF +RD +T+ +SFN P   SKYIQ   GI  S K +D  AQLACPA +Q  STPL+LLG+DLYN+ NSS+  R   I  EY  S++ RV+R  PAFGIGGVGN   R Y
Sbjct:   70 LKQGFAAFVASPHRFITTRQFRLVFAIYFSTYMTANVIDTTSEFYQREPTETAAAKFVGTTAVNMTACIIKDRAFTRMFGTVASKPLPLFSYLLFASRDSLTILSSFNAPPIVSKYIQTE-GILNSSKMSDTIAQLACPAVMQFISTPLHLLGLDLYNNSNSSSGQRLSLIRREYVKSVLARVARIAPAFGIGGVGNNYVRSY 271          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.040e-49
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 1276
            +++   + +  P  F  + EFL+I+G+Y+ TYV+AN I T CE ++ ++  PKFIGT+AVN++ C+AKD  F RMF  + P   P ++  LF  RD +TVAASFN P   +K +++   +    A   AQL CPA +Q  STPL+LLG+DLYN+   SA  R  F+  EY  S+  R+ R GPAFGIGGVGNT FR    + F
Sbjct:   59 LKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A8H7BJY4_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BJY4_9FUNG)

HSP 1 Score: 186 bits (472), Expect = 1.470e-49
Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 2
Query:  674 EGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVE---DTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQER-WGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKY 1261
            +G + +  +PH F    ++ +I+G+Y  TY+ ANM+ TTCE+  V+    +W KF+ T+AVN++ C+ KD  FTRMF     +P+P  +YL F  RD MTVAASF  P   SK +QE+ W  S+  A V AQL+CPA +Q FSTPL+LLG+DLYN P ++   R   I S Y  + + R +R GPAFGIGGVGNT FR Y
Sbjct:   70 QGFQTLFTQPHKFVGSIQYRLIFGLYFGTYMTANMVETTCEQRSVDHVTSSWIKFLATTAVNMSVCIYKDRAFTRMFGVSAVKPLPLLSYLFFATRDSMTVAASFIAPPIVSKALQEKEW--SEDHAKVAAQLSCPAAVQFFSTPLHLLGLDLYNRPAATVGQRAGLIRSLYFKTTLARCARIGPAFGIGGVGNTYFRSY 267          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD)

HSP 1 Score: 185 bits (469), Expect = 2.760e-49
Identity = 90/203 (44.33%), Postives = 124/203 (61.08%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLF 1276
            I+E  K  +  P  F  + EF++++G+Y  TY +AN I T CE ++ ++  PKF+GT+AVN+  C+AKD  F +MF  V P   P     LF  RD +TV ASFN P   +K ++   G+    A   AQL CPA +Q  STPL+LLG+DLYN+  +S  AR +F+  EY  S + R+ R GPAFGIGGVGNT  R+   + F
Sbjct:   60 IKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM)

HSP 1 Score: 183 bits (465), Expect = 9.510e-49
Identity = 90/197 (45.69%), Postives = 125/197 (63.45%), Query Frame = 2
Query:  668 IREGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 1258
            +RE   + +  P  F  + EF +I+G+Y  TY+AAN+  T CE +++++  PKFI T+AVN++ C+AKD  F RMF  + P   P ++  LF  RD MT  ASFN P   +K I+++  + K  A   AQL CPA +QL STPL+LLG+DLYN+   +   R  F+  EY  S++ R+ R GPAFGIGGVGNT FR 
Sbjct:   59 LRELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRN 255          
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Match: A0A0L0HLK1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLK1_SPIPD)

HSP 1 Score: 184 bits (467), Expect = 1.070e-48
Identity = 90/193 (46.63%), Postives = 123/193 (63.73%), Query Frame = 2
Query:  677 GVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGTSAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMPDPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNSSAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFR 1255
            G + ++ +P  F  +P  L ++GVYA TY+ AN I + C+    +  +PKF+GTS  N+  CVAKD+ FTR F + K RP+P S++ L+T+RD +T+ ASFN+P   S+ +   WGI K+ AD+ AQL  P  +Q  STP++LLGMDLYN P + A  RG FI  EY  S   R+ R   AFGIGGV N  FR
Sbjct:   82 GTRNLLTRPFHFIRQPACLFMFGVYAGTYLTANTIQSVCDYEGWDWFYPKFVGTSIANVGLCVAKDVCFTRWFGSGKARPVPWSSFALYTSRDCLTIFASFNLPSILSQKMTTSWGIDKRPADIAAQLLTPCAVQFVSTPMHLLGMDLYNRPAAKASERGTFIAREYAKSTSARIGRIFAAFGIGGVANQYFR 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54442.12825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G8_9STRA1.550e-7357.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A261XX22_9FUNG9.200e-5852.79Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A433PI02_9FUNG3.140e-5247.72Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
A0A8H7S7R9_9FUNG1.370e-5047.76Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A8H7U8D9_MORIS3.500e-5048.28Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A662XCZ4_9STRA1.040e-4945.32Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8H7BJY4_9FUNG1.470e-4948.00Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
K3WSU5_GLOUD2.760e-4944.33Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GH37_PHYRM9.510e-4945.69Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0L0HLK1_SPIPD1.070e-4846.63Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54442contigH-elongata_contig54442:34..3448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.8
Seed ortholog evalue9.8e-45
Seed eggNOG ortholog42099.EPrPV00000018360
EggNOG free text desc.Pc13g06010 protein. Source PGD
EggNOG OGs1MEHD@121069,28PN9@1,2QWAD@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons4
Model size2645
Cds size597
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54442.12825.1prot_H-elongata_contig54442.12825.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig54442 817..2088 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930887.2657769-UTR-H-elongata_contig54442:33..5231622930887.2657769-UTR-H-elongata_contig54442:33..523Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 34..523 +
1691679612.1308358-UTR-H-elongata_contig54442:33..5231691679612.1308358-UTR-H-elongata_contig54442:33..523Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 34..523 +
1622930887.2873032-UTR-H-elongata_contig54442:618..8161622930887.2873032-UTR-H-elongata_contig54442:618..816Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 619..816 +
1691679612.1426191-UTR-H-elongata_contig54442:618..8161691679612.1426191-UTR-H-elongata_contig54442:618..816Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 619..816 +
1622930887.357108-UTR-H-elongata_contig54442:2088..34481622930887.357108-UTR-H-elongata_contig54442:2088..3448Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 2089..3448 +
1691679612.1933324-UTR-H-elongata_contig54442:2088..34481691679612.1933324-UTR-H-elongata_contig54442:2088..3448Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54442 2089..3448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930887.3077717-CDS-H-elongata_contig54442:816..9991622930887.3077717-CDS-H-elongata_contig54442:816..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 817..999 +
1691679612.1553316-CDS-H-elongata_contig54442:816..9991691679612.1553316-CDS-H-elongata_contig54442:816..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 817..999 +
1622930887.3263214-CDS-H-elongata_contig54442:1386..15721622930887.3263214-CDS-H-elongata_contig54442:1386..1572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 1387..1572 +
1691679612.1733632-CDS-H-elongata_contig54442:1386..15721691679612.1733632-CDS-H-elongata_contig54442:1386..1572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 1387..1572 +
1622930887.343279-CDS-H-elongata_contig54442:1860..20881622930887.343279-CDS-H-elongata_contig54442:1860..2088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 1861..2088 +
1691679612.1813607-CDS-H-elongata_contig54442:1860..20881691679612.1813607-CDS-H-elongata_contig54442:1860..2088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54442 1861..2088 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig54442.12825.1

>prot_H-elongata_contig54442.12825.1 ID=prot_H-elongata_contig54442.12825.1|Name=mRNA_H-elongata_contig54442.12825.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERSQVEDTWPKFIGT
SAVNIASCVAKDLQFTRMFATVKPRPIPASTYLLFTARDGMTVAASFNMP
DPASKYIQERWGISKKTADVTAQLACPAGIQLFSTPLNLLGMDLYNSPNS
SAKARGKFILSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFASLFTS*
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mRNA from alignment at H-elongata_contig54442:34..3448+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig54442.12825.1 ID=mRNA_H-elongata_contig54442.12825.1|Name=mRNA_H-elongata_contig54442.12825.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3415bp|location=Sequence derived from alignment at H-elongata_contig54442:34..3448+ (Himanthalia elongata Himel1 dioecious)
TTATTGTCGTTTCCTTTTGTATTGGAGAGTACCTTGAACGTGTTTCTCCT TTCCGGATGGTGTGTTGTTGTTTTTTTCTACCTTGTGACCACGCGCTGGA TTTTGATATCAGCTTATTATGTGAGATTCAATTCAAAATTCAACACAAAA AAAAATAGTTTCTTTCCATTCATATGATGACAGGTTTGGAGGGAAGGGGT TAACTTTCTCGCACCCTTAATAATCAACATTGTGCTAGGGTTCGTGATTT CTCCTTCCCGCCCCTCCCTCTTCTCGCATCTTCGAATGCCACAAAGACGA CTTGTCGGGGTGAAATAACACCGCCCCCTTAATCGTAACCATCAACTGCA GACGGATTTTGTGTCGCAACACCATGTAATACATGGATTATGGTTTAAAT TCTTAACCCTGGAACGTTGAATGGCCCAGCCGTAAGCTCTTCTAGAGCAG AGCTACTTGTTGTATACAAAATGGCAATAAAAAAAATTGTACCACGAAAA GTACCCCCAATTTTCCCGAAGCCTGTTAACAGTTGTGGTTGCTCAAAAGA GTTGGAATGAGTTCGCAGTCTTATATGGTTGATGATTGTGTTTTGTATAT TTACCGCTTGGTATCCTGCCGAAAGGATTTCCCCGCGTTTGTTTCACTTC GATTATCCGTGGAAGGGCTAGGTTTGGGTAGAATGTAGATATACTCATCT CCGGAAAGGGCTAATCTCATATTTTCCCCATTAAACCCCGCATTTTCCTG TTTCCTTACGCTATCAGGGAAGGAGTCAAGGAAATGATTCTCAAGCCTCA CGTTTTCCACAGCCGCCCGGAGTTCCTGATGATCTGGGGCGTGTACGCGG TGACTTACGTTGCCGCAAACATGATAATCACGACTTGTGAGCGAAGTCAG GTGGAAGACACGTGGCCCAAGTTCATCGGCACCAGCGCGGTCAACATCGC CAGTTGTGTCGCAAAGGTAACCGCGCTTTGCTGCTTTTGTACCTCAAATA CCAACGGTAATCTACAACCGCGCTAAGCCCTGCACACATAGTTTCATTTT ATGAAGGTGTGTAGAGAAAACGTACCTTGTAAATGTCGCAGTTGGCAATG TTAAACAAGAGAAGGAACTCGAGAATCCCCGTCTCCTCGATTTCCTCCAA CGCCACTCGTCGCTGACGTTGATGTACTCGCGCCCTTTCAAAACGGAATG ACTTCCTCATTTTTTCCCGATTTCTCGGGTAAATGGTGACGTTTTGTAGT CGTGCGCCGGATCGCATGCGTTTTCGCCGAGAAGCACTAAGTTTTCTGAT GACAAATACCGTTTGTTTTGTCTGTAAATGTTGCATTGCGTCTCACGACC CAGGACCTCCAATTCACGCGTATGTTCGCGACGGTGAAACCGAGGCCAAT TCCAGCCTCAACGTACCTTCTCTTTACAGCCCGTGACGGCATGACTGTCG CAGCGTCCTTTAACATGCCCGATCCGGCATCGAAGTATATCCAGGAGCGG TGGGGAATATCGAAGAAGACCGCTGACGTCACTGCTCAGGTACGCACGGC AACGGCTTTCAGAGGCGCTTGTTTTATGTACAAAGAGTTGGCGAGCGGAG TATTTCTAGTGCAGGAAACCAAGCGATTGCAAATGAGTTAGGTACACAAA CCCGGAGCAGACGGACTTGCCCAGGGCTGCTGTGATAGTCACGTGGGCAC CGATTACTCCCATTTACAGGCCAAGTATATGCCCGTCGCTTGTTTTGATC CACCCCGCCCTCCTTGCTCCTCTGGTGTGTGCCTGCGGATGCCCCCCCTC CACTTCCCGTAATATGGTCCCTTGCAGCTTGCGTGTCCAGCCGGTATCCA GCTCTTCTCGACCCCGTTGAATCTTCTCGGGATGGACCTTTACAACAGCC CGAACAGCAGTGCCAAGGCCCGTGGGAAGTTCATCTTGTCAGAGTACACA TCGTCCATGATTTTGCGAGTCAGCCGCACCGGACCCGCTTTCGGGATAGG GGGCGTGGGTAACACGGCCTTCAGAAAGTACTTTGCCTCCTTGTTCACCT CGTAGGCCCTCTATGACGGTCGGGTGGTGTGTGGTATGGTGTGTAGTGCG AGGGGTCGAAAACAATAAGGGTTGAAAGAGCCCAAGGTAGTCTAGGCGTT TTAAATGTAGATACGAGAGGGGGTGGGCATGAAAGACCTTGAGAGCCGCC TCGTGGTCGAGGTGGCAAGTGGGACACCTATGTTCGCGTCCCAAAGGCCA CTAATGACTCAGTAAGAAGGCCTAGTCGAAGTGCGGGAAGCGATTAATGA TTTTGAGGTGGCCCCCAGAAGCGTGTAGCAATACCGGAGTTTTGCTGACT ATTTTCAACTAAAAAAGGCGTAGATAATTTTATCCAAACGCAGAATAATG TATATGGTTATCATATCCTGCGATATTCGTTGGTTTTTTCTTGGATAACC GTCTGCGTATTCAAAAGACAGAATCGGTGTGTGGTACAGAGCCAGCTTGA AGCCTTGGCCTATCTCACCCCACGCGCGTGGCAAGAGATTATGAACGTCC CGTGGCCTTCGATGCCCGGTCTTTGTCTTCACCCCGAGTCCCTCGTAGGT GCGCCATCAGCGCTAGGCCTCTGTCCGAAGCGACATGGTGTTAGGTCTGA TCCAGGGTTAGCGGAACATAATTTGCGCTCCATGGCTACTATCTCCCGCG ATTTCACGGCAAAGCCTGGCCAATATTTAACGTATGGTCCAACGCCATGA TTCGTTCCTATCGCCCCAAAAGATTTTAGTCCAGATCTAGAGCATCGTGA AGATGTTGTATGTTGCGAGCGGCTCGAAAATGACCCGCTCGCAAGTAAGG GGCGGAAATAAGTAACCTTGCTTAGAGACATTCGGAGGTCAAAAAAGGAT CTTGCCTGTGATAATATTTTTTTCGGGCAACAAATGTAAGTGTGCCCGTT GGTGGGTATTATTGAAGTATTGAAATTTAGATCCCCGAATAAAAGGATTG CTTCGGGCCTTATTAGCGGCCGTGGTAGTAAGTCGAAGGCGAGATAATCG TCGACGATCTTTACTTTTCGATATCTGTTGAGCACAAATCAGGGTAGCTT TCCCACTTATTTGGGGCTCACGTGATGAAAAGTATATTATAAATAGCGTT GGTAGTTCAAAATTATATAGTACTTTATATAGCACTCAAGCGCTCCACCT CGGGAGCCCAGGGAGGCAATGGGACGGAGTGACACGGCTGAACCCGAAGT ATCGTATGATAAGTCACGTGCGTGCATAGGAAAGTTGACACTTCAATGTT GATATTTTCTCGAGGGTAATACAGCTAAGAAGATGTGGATGTTCGGAGGG TTGGAAGGAGTTCATTTTTTTTTTTTTAATGACCTCTCACGGCGCGAAGA AGGCTTAGATGTCCG
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Coding sequence (CDS) from alignment at H-elongata_contig54442:34..3448+

>mRNA_H-elongata_contig54442.12825.1 ID=mRNA_H-elongata_contig54442.12825.1|Name=mRNA_H-elongata_contig54442.12825.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig54442:34..3448+ (Himanthalia elongata Himel1 dioecious)
ATGATTCTCAAGCCTCACGTTTTCCACAGCCGCCCGGAGTTCCTGATGAT
CTGGGGCGTGTACGCGGTGACTTACGTTGCCGCAAACATGATAATCACGA
CTTGTGAGCGAAGTCAGGTGGAAGACACGTGGCCCAAGTTCATCGGCACC
AGCGCGGTCAACATCGCCAGTTGTGTCGCAAAGATGATTCTCAAGCCTCA
CGTTTTCCACAGCCGCCCGGAGTTCCTGATGATCTGGGGCGTGTACGCGG
TGACTTACGTTGCCGCAAACATGATAATCACGACTTGTGAGCGAAGTCAG
GTGGAAGACACGTGGCCCAAGTTCATCGGCACCAGCGCGGTCAACATCGC
CAGTTGTGTCGCAAAGGACCTCCAATTCACGCGTATGTTCGCGACGGTGA
AACCGAGGCCAATTCCAGCCTCAACGTACCTTCTCTTTACAGCCCGTGAC
GGCATGACTGTCGCAGCGTCCTTTAACATGCCCGATCCGGCATCGAAGTA
TATCCAGGAGCGGTGGGGAATATCGAAGAAGACCGCTGACGTCACTGCTC
AGGACCTCCAATTCACGCGTATGTTCGCGACGGTGAAACCGAGGCCAATT
CCAGCCTCAACGTACCTTCTCTTTACAGCCCGTGACGGCATGACTGTCGC
AGCGTCCTTTAACATGCCCGATCCGGCATCGAAGTATATCCAGGAGCGGT
GGGGAATATCGAAGAAGACCGCTGACGTCACTGCTCAGCTTGCGTGTCCA
GCCGGTATCCAGCTCTTCTCGACCCCGTTGAATCTTCTCGGGATGGACCT
TTACAACAGCCCGAACAGCAGTGCCAAGGCCCGTGGGAAGTTCATCTTGT
CAGAGTACACATCGTCCATGATTTTGCGAGTCAGCCGCACCGGACCCGCT
TTCGGGATAGGGGGCGTGGGTAACACGGCCTTCAGAAAGTACTTTGCCTC
CTTGTTCACCTCGTAGCTTGCGTGTCCAGCCGGTATCCAGCTCTTCTCGA
CCCCGTTGAATCTTCTCGGGATGGACCTTTACAACAGCCCGAACAGCAGT
GCCAAGGCCCGTGGGAAGTTCATCTTGTCAGAGTACACATCGTCCATGAT
TTTGCGAGTCAGCCGCACCGGACCCGCTTTCGGGATAGGGGGCGTGGGTA
ACACGGCCTTCAGAAAGTACTTTGCCTCCTTGTTCACCTCGTAG
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