mRNA_H-elongata_contig52824.12601.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: D7FR43_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR43_ECTSI) HSP 1 Score: 204 bits (519), Expect = 6.570e-65 Identity = 89/128 (69.53%), Postives = 109/128 (85.16%), Query Frame = 1
Query: 7 QIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLLRPW 390
+++GVY SAGWCPPC+ FSPLLSKW+K +K+ F VVF+S+DKSE MR++ GKGF+RLPFEPE R +AAESF VQ LPTLV+VNGDTGAV+T+WGRSA++KNP GCL+ WK G GV+WLQLLRPW
Sbjct: 63 KMIGVYVSAGWCPPCRAFSPLLSKWAKEHKNEFEVVFVSLDKSEQAMRDYITGKGFVRLPFEPESDRHRAAESFGVQALPTLVVVNGDTGAVVTSWGRSAITKNPNGCLKAWKEGNHGVSWLQLLRPW 190
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A4P9XQ06_9FUNG (Thioredoxin-like-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQ06_9FUNG) HSP 1 Score: 146 bits (368), Expect = 1.180e-41 Identity = 62/128 (48.44%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 10 IVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGK-GFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLLRPW 390
++GVY +A WCPPC+ FSP+L ++++ + D+ ++ +S D+ E E+ + K G++ LPF+ + RR A FEVQ++PTL IV+ DTG +++TWGRSA+ KNP GCLEEW+ G GV+W QL+RPW
Sbjct: 89 LLGVYFTASWCPPCQQFSPVLLRFTQQHADDLQIILVSHDRDEDAAAEYLSNKLGWMTLPFDDVDRRRTLARLFEVQMIPTLAIVDADTGKIVSTWGRSAIMKNPDGCLEEWRQGGTGVSWWQLIRPW 216
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A1Y1YRL7_9FUNG (Thioredoxin-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRL7_9FUNG) HSP 1 Score: 144 bits (362), Expect = 2.040e-41 Identity = 60/128 (46.88%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 7 QIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLLRPW 390
++VG+Y SA WCPPCK FSP+L+++++ NK+ FVVV +++DK++ +M +F GK +L +PFE E+ ++ +V +P+L+IVN T ++TTWGRSA+SKN CL+EWK G+ G +W LL+ W
Sbjct: 36 KLVGLYFSASWCPPCKAFSPVLTQFAEDNKEEFVVVHVNLDKTKEDMMDFIQGKNWLSVPFEDEKVKKALGTQLKVYTIPSLIIVNTTTKQIVTTWGRSAISKNRDHCLQEWKEGKHGCSWYHLLKFW 163
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A4P9Z3L3_9FUNG (Thioredoxin-like protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3L3_9FUNG) HSP 1 Score: 134 bits (337), Expect = 1.260e-37 Identity = 61/129 (47.29%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 7 QIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGK-GFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLLRPW 390
+VGVY +A WCPPC+ FSP L +++ + F VV +S+D E+ GK G+L +P+ R+ + V ++P L I+NG TGAV++TWGRSA+ KNP+ CLEEW+AG +GV+W QLLRPW
Sbjct: 35 MLVGVYFTASWCPPCQAFSPTLRAFAQTHAAAFQVVLVSLDTDPDAAAEYIVGKTGWLAVPWADRARRQSLTKQLGVSMIPQLTILNGGTGAVVSTWGRSAILKNPQHCLEEWQAGGSGVSWWQLLRPW 163
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: R1CJ06_EMIHU (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJ06_EMIHU) HSP 1 Score: 132 bits (332), Expect = 1.820e-37 Identity = 63/115 (54.78%), Postives = 85/115 (73.91%), Query Frame = 1
Query: 1 RLQIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWK 345
R +IVG+Y SA WC PC FSP+LSK A++++FVVVF+S D+SE EM+ F+ GKGFLR+PF R+ V ++PTLVIV+G TG V+T+WGR+AV +NP+GC+E WK
Sbjct: 4 RGKIVGIYFSAAWCKPCHRFSPVLSKLRAAHEEDFVVVFVSNDRSEAEMKRFSDGKGFLRVPF-TSRRRQWLHHRLAVNMVPTLVIVDGSTGEVLTSWGRAAVLRNPEGCVESWK 117
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A7S2TKD0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TKD0_9EUKA) HSP 1 Score: 127 bits (318), Expect = 3.440e-34 Identity = 58/125 (46.40%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 7 QIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLL 381
+IVG+Y SAGWC PC+ FSP+L K+ + D+F VVF+SMD+SE +M E+ GKGFL++ ++ ++R + V +P+LVIV+G+ G VITT GR A++ NP+GC+ WK G++G++W +
Sbjct: 74 KIVGLYFSAGWCGPCRAFSPVLKKFHEEYMDDFRVVFVSMDRSERDMVEYIKGKGFLQVDYKS-KSRTELITKCSVSSIPSLVIVDGNDGKVITTSGRMAITANPEGCVGSWKQGQSGISWCDCI 197
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A0L0FVZ1_9EUKA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FVZ1_9EUKA) HSP 1 Score: 100 bits (249), Expect = 1.930e-24 Identity = 50/117 (42.74%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 40 CPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQLLRPW 390
C K+ +L K + NKD+F+V+F+SMDKSE +M E+ K F+ + ++ E+ + +F V ++PTL I++ + ITTWGRSA+ KN + C+ EWK GR GV+W+QLL+ W
Sbjct: 40 CSGSKVDKSVL-KDKETNKDDFIVLFVSMDKSEEDMMEYVEDKNFVCIKYD-EDLVGELPSAFTVTMVPTLAIISPENEC-ITTWGRSAIDKNAENCIAEWKQGRPGVSWMQLLKFW 153
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A1Y1XVT0_9FUNG (Thioredoxin-like_fold domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XVT0_9FUNG) HSP 1 Score: 102 bits (253), Expect = 3.590e-24 Identity = 49/125 (39.20%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 7 QIVGVYASAGWC-PPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQL 378
+IVG Y +A W P +IF P L K+++ +KD F VV +S+DK + + + K FL +P++ E R + E + ++++PTL + + ++TTWGR A+ KN K CL+ WKAG +G++W QL
Sbjct: 86 KIVGFYFTAQWVGEPVEIFDPQLVKFAEEHKDEFTVVVISVDKDKETFKAYMKDKPFLAVPYD-EPIRERILEEWAIKLIPTLTVYHPLRHEIVTTWGRGAIMKNGKKCLDAWKAGDSGLSWSQL 209
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: A0A4P9ZMS5_9FUNG (Thioredoxin-like-domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZMS5_9FUNG) HSP 1 Score: 97.4 bits (241), Expect = 5.600e-22 Identity = 42/116 (36.21%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 RLQIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMREFAAG-KGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWK 345
R +++G++ SA WC PC+ F+P+LS++ + ++ + V++ +SMD+ M+++ +L +PF+ + T Q A+ ++Q+LPTLVI D+G ++ WG A+ KNP C+ EWK
Sbjct: 77 RGKLIGLFFSASWCVPCQYFAPVLSRFIEKHEADLVLILVSMDRQPEAMKQYLRQYPRWLAIPFKHQATYMQLADRLDIQILPTLVICEPDSGRPLSAWGVDAIHKNPTRCIAEWK 192
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Match: T1JL93_STRMM (Thioredoxin domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JL93_STRMM) HSP 1 Score: 89.4 bits (220), Expect = 7.160e-20 Identity = 44/130 (33.85%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 4 LQIVGVYASAGWCPPCKIFSPLLSKWS---KANKDNFVVVFLSMDKSEPEMREFA--AGKGFLRLPFEPEETRRQAAESFEVQVLPTLVIVNGDTGAVITTWGRSAVSKNPKGCLEEWKAGRAGVTWLQL 378
+ +VG+Y SA WCPPC++F+P L+++ KA + NF ++F++ D+S+ M+ + +L +P++ EE R + E FE+ +PTL+I+ G ++T GR V P C + W G VT ++
Sbjct: 29 VPVVGLYFSAHWCPPCRLFTPTLAEFYASIKAKEQNFEMIFITSDRSDEAMKSYMLECHGDWLAVPYKLEEFREKLDEKFEIDGIPTLIILKD--GEMVTNTGRWDVELKPDACYDHWAKGEVAVTETEV 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52824.12601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52824.12601.1 >prot_H-elongata_contig52824.12601.1 ID=prot_H-elongata_contig52824.12601.1|Name=mRNA_H-elongata_contig52824.12601.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp RLQIVGVYASAGWCPPCKIFSPLLSKWSKANKDNFVVVFLSMDKSEPEMRback to top mRNA from alignment at H-elongata_contig52824:2452..3110+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52824.12601.1 ID=mRNA_H-elongata_contig52824.12601.1|Name=mRNA_H-elongata_contig52824.12601.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=659bp|location=Sequence derived from alignment at H-elongata_contig52824:2452..3110+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52824:2452..3110+ >mRNA_H-elongata_contig52824.12601.1 ID=mRNA_H-elongata_contig52824.12601.1|Name=mRNA_H-elongata_contig52824.12601.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=786bp|location=Sequence derived from alignment at H-elongata_contig52824:2452..3110+ (Himanthalia elongata Himel1 dioecious)back to top |