mRNA_H-elongata_contig5224.12526.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5224.12526.1
Unique NamemRNA_H-elongata_contig5224.12526.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 1.160e-124
Identity = 206/362 (56.91%), Postives = 273/362 (75.41%), Query Frame = 2
Query:  200 YLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEG-REESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRIR 1282
            Y +S      R G+V R+ + IP+QS+KI+IV WQILTQF SVANVT+P+VY+ FLDG+D  NFDL+WV SAGC F++DFHDRLL  T+SP + +  L  TY   +   +   E+ ++ +  KHVS+ LL+TFL+YSSVSA LF+ F CEEL+D   YLRADY+I+CDSSKH A Q YAGFM+++Y +GIPALYA LLF +RH L+D    RE++    + S LWKPYKP   Y+EVIECGRRV LAGVVVFI+PNTA QIA+TL +A AF++V+E +APF S+WDAW++RTGH ++F+SMY+ALLL+VDVS E A SQ+ +E++LVAAH CMILAV+ E  ++  SL+ +++  +P  R R
Sbjct:  890 YAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAES-LQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQR-QEPTTRFR 1249          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 2.450e-124
Identity = 212/362 (58.56%), Postives = 260/362 (71.82%), Query Frame = 2
Query:  185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEGREESLA-VRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADP 1267
            + ++ Y VS E  G  RG+V R  + +P+QS+KI+IV WQILTQF SVAN+ FP+VYQ FLD ++  NFDL WV SAGC F+VDFHDRLL  TI+P + +  L A Y    R +    E  ++ V  KHVS+ LL+TFLVY+SVSAVLFQ FACEELDD K YLRADY IECDS KH A Q YAGFMI+LY +GIPALY   LF +   LR  E   E LA +   + LWKPY+P   Y+EVIEC RRV LAGVVVFIYPNTA QIAV L IA  F +++EA+AP+ S+WD W+ R GH ++ +SMYVALLL+VDVSDE ASSQ+ FE +LVAAH CM+  VL+E IM A+SL  +K+   P
Sbjct:  606 VALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSED-LQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 3.260e-120
Identity = 208/355 (58.59%), Postives = 268/355 (75.49%), Query Frame = 2
Query:  185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEG--REESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLR 1243
            + + ++LVS E  G RRG++HRV+KR+P+QS+KI++VVWQILTQF+SVANVT+P+VYQ FLDGV+ +NFD+ W+ SAGC  EVDFH RLL  TI P +A+  L  TY V  R++    E  ++ +R KH+S+ LLITFLVYSSVSA +FQ FACE+LDD K YLRADY IECDSS+H A Q +AG MIL+YP+GIP  Y  LL+ +R  L+ ++   R+ S  V+ IS LW PYKP R Y+EVIEC RR+ L GVVVFIYPNTA Q+AVTL IA +F++ +  +AP+ S+WDA IS  GHVI+F SMY ALL +VDVSDE A SQ+ F  +LVAAH CM++AV+VE I++  S R
Sbjct: 1404 IALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSS-GSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.920e-119
Identity = 216/376 (57.45%), Postives = 279/376 (74.20%), Query Frame = 2
Query:  185 LVIILYLVSTE-GAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKE-GREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQ-VADPLPRIRPLSTLSQ 1303
            + ++ Y+ S E G G + GIV  V + IP+QS+KI+IV WQILTQF SVANVT+P+VYQ  LD +D  NFDL+W+ SAGC  +++FH RLL  TISP +A+  L  TY    R  +   E  +  +  KHV+V LL+TF VYSSVS+ LF+ FAC++LD  K YLRADYSIEC+SS+H  +Q YAGFMI++Y +GIPALYA LLF +R  L+D++  REE   V++IS LW+PYKP   Y+EVIEC RRV LAGVVVFIYPNTA QIAVTL IA AF L++E +AP+ S+WD WISR GH+++F+SMYVALLL+VDVSDE ASSQ+ FE +LVA H CMIL VLVEA + A SLR +++ ++   PR R   +L++
Sbjct: 1140 VAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEK-LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLTR 1514          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 1.840e-114
Identity = 205/383 (53.52%), Postives = 271/383 (70.76%), Query Frame = 2
Query:  155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEGREESLAVRAIS--GLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQ-----VADPLPRIR 1282
            G V+L++     ++ Y+ S E  G  RGIV RV + IP+QS+KI++V WQI+TQF +VANVT+P+VYQ FL+G++  NFDL+W+ SAGC  +VDFHDRLL  TI P  A   L  TY   +R  +   ET +++VR KHV + LL+TF VYSSVSA LF+ FACE L+D K YL ADY IECDSSKH   + YAGFM+LLY  GIPALY+ LLF +R  L+ +E   + L  RA S   LWKPYKP   Y+EV+EC RRV LAGVVVFIYPN++ QIA+TL +A  F+L++E +AP+ S+WD WI+R GHV++  SMY+ALLL+VDVS E +SSQ  FE +LV AH  M++  + E +++AL+LR +++       D LPR R
Sbjct: 1235 GLVLLVA-----VVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATET-LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFR 1611          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 1.960e-113
Identity = 189/340 (55.59%), Postives = 251/340 (73.82%), Query Frame = 2
Query:  263 IPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHAL-RDKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRI 1279
            +P+Q++KI++V WQI+TQF S ANVT+P+VYQ FL+G+D  NFD++WV SAGC  ++DFHDRLL  TI P +A+  L ATY    R  +     T++ V  +HVS+ LL+ FLVYS VS+V+FQ FAC++L+    YLRADY IECDSSKH   + YAGFMILLYP+GIPA Y +LL  +R  L +D +GRE+   V +IS LW+PY+P   Y+EVIECGRR+ L G+VVFIYPNTA QIA+TL +   F +++EA+ P+   WD W+SR  H ++F+S+YVALLL+VDVS+E  SSQK FE +LVAAH CMILAV+VE I++    R K+Q  +P PR+
Sbjct:  672 LPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINR-GNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQ-DEPAPRV 1009          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 4.370e-113
Identity = 201/353 (56.94%), Postives = 258/353 (73.09%), Query Frame = 2
Query:  185 LVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHAL-RDKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSL 1240
            + ++ Y+VS +     RG V R+ + IP+QS KI++V WQILTQF +VANVT+P+VYQ FLDG+   NFDL+WV SAGC   VDFHDRLL  TI P +A+  L  TY    R  +   ET ++ +  +HVS+ LL+T  VYSSVS+ LFQ FACE L D + YLRADY I CDSSKH ALQ YAG M+++Y +GIPALY  LLF +R  L R    REE+  V + S LWKPYKP   Y+EVIECGRRV LAGVVVFIYPNTA QIA+TL +A AF++V+E +AP+ S+WD W+SR GH ++F+SMYVALLL+VDVS+E   SQ+ FEV+LVAAH CMIL +++E +++  +L
Sbjct: 1696 VAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET-LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 7.960e-113
Identity = 196/360 (54.44%), Postives = 256/360 (71.11%), Query Frame = 2
Query:  155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMA 1231
            G  VL     +V+I+Y++S E    R  ++ R+   +P+QS+KI+IV WQILTQFAS ANV +P VYQ FLDG+    FDL W+ SAGC  ++ FH RLL  TI P  A+  L  TY    R  +   E  ++ +  KHV V LL+TFLVYSSVS+ LF+ FAC+EL+D K YLR DY IECDSSKH   Q YAGFMILLYP+GIP LY+ LLF +R  L+ DK  R++S  V++ S LW+PYKP   Y+EVIECGRR+ L G+VVFIYPNTA Q+A+TL +A  F L++EA++P+ S+W+ W++R GHV++ +SMYVALLL+VDVSDE A SQ  FE +LV  H CMIL+V+VE  ++A
Sbjct: 1046 GMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEK-LRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 1.880e-109
Identity = 196/362 (54.14%), Postives = 250/362 (69.06%), Query Frame = 2
Query:  200 YLVSTEG-AGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRI 1279
            Y++S +   G   G+V R+ + IP+QS+KI+IV WQILTQF SVANVT+P+VYQ FLD +D  NFDL+WVFS GC F++DFHDRLL  TISP +A+  L  T     R  +   +    +V QKHVS+ LL+TFLVYS+VS+VLFQ FACEEL D K YLR+DY IECDSS H A Q YAGFMI+LYP+GIPALYA LLF +R  LR D+  RE+   V + S LW+PYKP   Y+E+                        AVTL IA AF +++EA+ P+ S+WDAW SR GH+++ +SMYVALLL+VDVSDE ASSQ+ FE ILVA H CM+  V+VE I++++SLR  K+   P PR+
Sbjct:  862 YIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRL 1199          
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 4.340e-108
Identity = 191/360 (53.06%), Postives = 252/360 (70.00%), Query Frame = 2
Query:  155 GFVVLLS*WRLVIILYLVSTEGAGPRRGIVHRVMKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTWVFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVKDVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECDSSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALR-DKEGREESLAVRAISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAAAFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQKTFEVILVAAHGCMILAVLVEAIMMA 1231
            G  V+     +V+I Y++S E    R  +  R+   +P+QS+KI+IV WQI+TQFAS ANV +P VYQ F+DG+    FDL W+ S GC  ++DFH RLL  TI P  A+  L  TY    R  +   E  ++ +  KHV V LL+TFLVYSSVS+ LF+ FAC+EL+D   YLR DY IECDSSKH   Q YAGFMILLYP+GIP LY+ LLF +R  L+ DK  R +S  V++ S LW+PYKP   Y+EVIECGRRV L G++VFIYPNTA Q+A+TL +A  F L++EA++P+ S+W+ W++R GHV++ +S+YVALLL+VDVSDE A SQ  FE +LV  H CMIL+V+VE  ++A
Sbjct: 1106 GLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEK-LRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5224.12526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G301_ECTSI1.160e-12456.91Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2Z8_ECTSI2.450e-12458.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY65_9PHAE3.260e-12058.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0E9_9PHAE1.920e-11957.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSC0_ECTSI1.840e-11453.52Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7FHH1_ECTSI1.960e-11355.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI4.370e-11356.94Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI7.960e-11354.44Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FTL7_ECTSI1.880e-10954.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7Z1_9PHAE4.340e-10853.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5224contigH-elongata_contig5224:22..3785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.0
Seed ortholog evalue1.8e-110
Seed eggNOG ortholog2880.D7G301
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size2060
Cds size1071
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5224.12526.1prot_H-elongata_contig5224.12526.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5224 758..3158 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930854.560451-UTR-H-elongata_contig5224:21..7571622930854.560451-UTR-H-elongata_contig5224:21..757Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 22..757 -
1691679598.9871948-UTR-H-elongata_contig5224:21..7571691679598.9871948-UTR-H-elongata_contig5224:21..757Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 22..757 -
1622930854.6123827-UTR-H-elongata_contig5224:3158..32291622930854.6123827-UTR-H-elongata_contig5224:3158..3229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 3159..3229 -
1691679599.0225573-UTR-H-elongata_contig5224:3158..32291691679599.0225573-UTR-H-elongata_contig5224:3158..3229Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 3159..3229 -
1622930854.629857-UTR-H-elongata_contig5224:3603..37851622930854.629857-UTR-H-elongata_contig5224:3603..3785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 3604..3785 -
1691679599.0302758-UTR-H-elongata_contig5224:3603..37851691679599.0302758-UTR-H-elongata_contig5224:3603..3785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5224 3604..3785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930854.5775805-CDS-H-elongata_contig5224:757..17651622930854.5775805-CDS-H-elongata_contig5224:757..1765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5224 758..1765 -
1691679599.0022182-CDS-H-elongata_contig5224:757..17651691679599.0022182-CDS-H-elongata_contig5224:757..1765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5224 758..1765 -
1622930854.5942292-CDS-H-elongata_contig5224:3095..31581622930854.5942292-CDS-H-elongata_contig5224:3095..3158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5224 3096..3158 -
1691679599.0145345-CDS-H-elongata_contig5224:3095..31581691679599.0145345-CDS-H-elongata_contig5224:3095..3158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5224 3096..3158 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5224.12526.1

>prot_H-elongata_contig5224.12526.1 ID=prot_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp
MKRIPMQSMKIIIVVWQILTQFASVANVTFPNVYQTFLDGVDFINFDLTW
VFSAGCFFEVDFHDRLLWITISPALAMGALGATYIVTMRKTQIMMETTVK
DVRQKHVSVALLITFLVYSSVSAVLFQMFACEELDDDKWYLRADYSIECD
SSKHIALQTYAGFMILLYPIGIPALYASLLFSNRHALRDKEGREESLAVR
AISGLWKPYKPQRLYFEVIECGRRVFLAGVVVFIYPNTAGQIAVTLTIAA
AFMLVAEAMAPFQSQWDAWISRTGHVIIFISMYVALLLRVDVSDENASSQ
KTFEVILVAAHGCMILAVLVEAIMMALSLRTKKQVADPLPRIRPLSTLSQ
RAPGLL*
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mRNA from alignment at H-elongata_contig5224:22..3785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5224.12526.1 ID=mRNA_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3764bp|location=Sequence derived from alignment at H-elongata_contig5224:22..3785- (Himanthalia elongata Himel1 dioecious)
CTTTGATAGATGCGGGAATTGAACATGCTACAAGTAGCGGGGGCAACACC ACCCTGGCGAGGCTAATAGTTGATAAGGGATTTTGGCGGGCAACTAACAA CAGCACCCAAATTTACGAATGTTTCAACACCGACGCGTGCGTGGGAGGTG TGACGGGTTCGTCGTATTACTGTCTTAATGGCTATGAAGGTCCATGTGAG TCCAAGTTGTGGCGATCACCGCCTCAGGTGGATTATTGTGGCTTGTGCTC TCGGGAATAATCTTATTGGCCCATGATGAAAACCATATCCGTTTTTCATG TTACCAACTCATGGCAGAAATAGTCAAGCTATATGTAGCTTCTCTGTATC GAGATGATGTTACCCTCCGGTGTACGTCGTTTCGAATGATGATGCGGCGC CCAGTACACTCTTTTTTATGTTCGTTTCGTTGGCAGATTGCTCTATCTGC GCCGAAGGCTATGTGTCCGGTCTAAGTTTATCTTGCCGGAAGTGCTCCGA CCCAGCGGTGGGCATCGCAATCGCCGTCGTGCTCACCATGCTGGCCTTAG CGATCGGATTGGTCATCATTTTGTACCTGGTTTCTACGGAAGGAGCAGGT CCACGGCGAGGAATCGTTCATCGCGTTATGAAGCGGATACCTATGCAGTC TATGAAAATCATTATCGTTGTATGGCAAATCTTGACACAGGTAAAGGCAC CCGTCAAATGATCATCTTGCTGCTATAAACTCTAGATGGGAATACGGCTA CTATAATACTGCTACATATTAGAGGTCGTAAGATTTCCTTTAAGGGCCTG AAACCACGTCCTCGCATCACGAAGCTTTTACACAACATCCTGAAAGAAAC ATTGTGGACACGCCTGTGTCAAGTAAGCAATATTTCAAAACAGATTTAAA GTATTGGCGAAATGAAGACTCGATTTAGAAAAGTAGACTGAGATGTTTTT TGCCAATTTTGGGAGGGAAAAATGCCGATTGAGATGTTTCAGAGACATAC TTTTTGACTGCCTTGAGAGTGCCGTCAACGAGAAGAAAATAAAATAAAAT AATGTACGGCCTTGGCGAGATATCAGGAGATTACGGCATGGTTTGAGAGC GTGTTTCCAAATACTGAAAGCGTTTACCTTGTTAATTGCCGTGGATTCGC GGGGTGTCCAATTTCGACGGCCGTACAATGAAAATGGCCGCATTCTCAAG GCGACCAAAAGAGTCTCGCTGTGAAACATATCAATCGGCAGTCGTTGCTC CCAAAATTGGTAAAAATATTTCAGTCTTCTTTCTAAATCGAGTCTACATT TCGCCAATATATGTGATGAAGTGCCTTCGAGTTTCGTTTAGCTGGGTTTT GTTTTTAATATCTCGATAATGTTTGCCTTGTGAAAATGTTCTTTTCGCTC ACTGCCTAGTGACACCGAGTCTCGTAAAATACATTTATAGTTAGACAGTG TACTACTGGGTCTTCCGAATGCTTCCGAAGCTCCTGTTTACGAAAGTCTT GGAGGACGTTTCGACGATTTTAGAACTGTGTTTTTCAAACGATCAAATTT CATTTAATCTGGTTTGGTTGGTAGGTTCGCGATCCCAGCTCCCATCCTTT GAGTTCTTTTATTTTCTGATGAGCTACTGGTTGTTATTCAGATACCTCAT ACCGCCAATTTTTGGCGCTGGCGCTGCCCTTTTTGCCTGAGTAGATATCA TTTTTATGGACAGAATAAAATGCATCCGCCATAGCTTTGACATAAAGTAG AGATTGCTATGATTGAATTCTTGATAGAATTCTCACATAAGCTGATGTCA AAATCCAGCCCGTGGTCACAAGGTAAAAAAAATACACCATCCGGANNNNN NNNNNGGTACTCTCCAATACAAAAGGAAAACACTTTAATGGTGCACAATA CAAATACTCGGATACATCTGTGCGAATTTCATCTGCGTACACTAGCGAAA CCCTCCCAGCCTTAAACCTGTAAGTTATGACGCGTGCGTTCAATTTTTGC CTCTGTCGGGATCCAAACAGTTCGCATCTGTGGCCAATGTGACCTTCCCG AACGTATATCAAACGTTCCTCGACGGCGTGGACTTTATCAACTTTGATTT GACCTGGGTTTTCTCGGCTGGGTGCTTCTTTGAGGTCGATTTCCACGACC GTCTTCTATGGATAACAATTTCCCCTGCACTGGCTATGGGTGCGCTGGGG GCTACTTATATAGTCACGATGCGCAAAACTCAAATAATGATGGAGACCAC AGTCAAAGATGTCCGGCAAAAACACGTTTCAGTGGCACTTCTGATTACGT TCCTGGTATACTCGAGCGTCAGCGCGGTTTTGTTTCAAATGTTTGCCTGC GAAGAGCTCGACGACGACAAGTGGTATCTTCGGGCAGATTACAGCATCGA GTGCGACTCCTCCAAACACATTGCTTTGCAAACCTACGCCGGGTTTATGA TATTGTTGTACCCCATCGGGATACCGGCGCTGTACGCCAGCCTATTGTTT TCAAATCGCCACGCGTTGCGGGACAAGGAAGGCCGGGAAGAATCCCTTGC AGTAAGAGCAATTTCAGGCTTGTGGAAGCCATACAAACCCCAAAGATTAT ATTTCGAGGTGATTGAATGTGGGCGTCGAGTTTTCCTGGCAGGAGTTGTG GTATTCATCTACCCGAATACCGCGGGTCAGATAGCGGTTACTCTAACTAT TGCAGCTGCATTTATGCTCGTGGCAGAGGCTATGGCTCCATTCCAGTCAC AATGGGATGCCTGGATAAGCCGGACGGGGCATGTGATCATTTTCATAAGC ATGTACGTGGCTCTGTTGCTAAGGGTGGATGTGTCCGACGAAAATGCATC CAGTCAGAAAACGTTTGAGGTTATATTAGTAGCTGCTCATGGGTGCATGA TTCTTGCTGTTTTAGTGGAGGCTATAATGATGGCATTGTCGTTGAGAACG AAAAAACAGGTTGCAGATCCTTTACCTAGGATACGCCCACTGTCGACATT AAGCCAGAGAGCTCCAGGGTTGCTATAGTCAATAAGGAGCATCACACATA ATTTTGCGCAAGTAAGAGATTATCGTTGTACATCATTTTGGGTTGCGTGA ATAACATGGCAAGTTTCCACTCTGTCTTGCTTCGATGTCGATTTCCATCC ATTCTGAGGTGTTTTTTAATGGATTTCTTCGAGCCTTTTTAAGATTGATT TTGTTGCTGTTTGGTACATGAGACCAATCATATTATTTGCTAGGTCAATT CCGGAATAAGTAAAGTATTGATCGACATTAAGTCCGTAGATAGTTCCCTT GGGAAACAGCTATTGTCCGATAGCCGGGATTCGAAACAAAAACAAGGCGG ACAAAACACCGAAGGTCCAAACAAAAAGGTCCAATATATGACGTAGATCG GAGCTTAACTTCGATGCAGTTGCAAACTGGACCGATGCATGTATTATTAT AAGAGAAAAGTTAGGCATCAGACATAATGATTTATATATACGTATATATT ATTAGAAAAACCTTAAACTCATACCAACCCTCCGAACATCCACACCTTCT TAGCGCCAGGAGAGGTGCCATCCAGGAGACCAACTATCGTCGGGTTCGAA TGTGTACATTACTACCTTTGAGCACGAAATCGTCACACATAAGTATATGG GTCAGTAAAGCACATGGTTGCCTTATGATATCGGTTGGTTTCAGACTGTA TTACAGCTCGTGAGAAATTGTGTTCCGCAATAATGAGTTCATCGGGTTAT ATTCTGTACTAAAT
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Coding sequence (CDS) from alignment at H-elongata_contig5224:22..3785-

>mRNA_H-elongata_contig5224.12526.1 ID=mRNA_H-elongata_contig5224.12526.1|Name=mRNA_H-elongata_contig5224.12526.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2142bp|location=Sequence derived from alignment at H-elongata_contig5224:22..3785- (Himanthalia elongata Himel1 dioecious)
ATGAAGCGGATACCTATGCAGTCTATGAAAATCATTATCGTTGTATGGCA
AATCTTGACACAGATGAAGCGGATACCTATGCAGTCTATGAAAATCATTA
TCGTTGTATGGCAAATCTTGACACAGTTCGCATCTGTGGCCAATGTGACC
TTCCCGAACGTATATCAAACGTTCCTCGACGGCGTGGACTTTATCAACTT
TGATTTGACCTGGGTTTTCTCGGCTGGGTGCTTCTTTGAGGTCGATTTCC
ACGACCGTCTTCTATGGATAACAATTTCCCCTGCACTGGCTATGGGTGCG
CTGGGGGCTACTTATATAGTCACGATGCGCAAAACTCAAATAATGATGGA
GACCACAGTCAAAGATGTCCGGCAAAAACACGTTTCAGTGGCACTTCTGA
TTACGTTCCTGGTATACTCGAGCGTCAGCGCGGTTTTGTTTCAAATGTTT
GCCTGCGAAGAGCTCGACGACGACAAGTGGTATCTTCGGGCAGATTACAG
CATCGAGTGCGACTCCTCCAAACACATTGCTTTGCAAACCTACGCCGGGT
TTATGATATTGTTGTACCCCATCGGGATACCGGCGCTGTACGCCAGCCTA
TTGTTTTCAAATCGCCACGCGTTGCGGGACAAGGAAGGCCGGGAAGAATC
CCTTGCAGTAAGAGCAATTTCAGGCTTGTGGAAGCCATACAAACCCCAAA
GATTATATTTCGAGGTGATTGAATGTGGGCGTCGAGTTTTCCTGGCAGGA
GTTGTGGTATTCATCTACCCGAATACCGCGGGTCAGATAGCGGTTACTCT
AACTATTGCAGCTGCATTTATGCTCGTGGCAGAGGCTATGGCTCCATTCC
AGTCACAATGGGATGCCTGGATAAGCCGGACGGGGCATGTGATCATTTTC
ATAAGCATGTACGTGGCTCTGTTGCTAAGGGTGGATGTGTCCGACGAAAA
TGCATCCAGTCAGAAAACGTTTGAGGTTATATTAGTAGCTGCTCATGGGT
GCATGATTCTTGCTGTTTTAGTGGAGGCTATAATGATGGCATTGTCGTTG
AGAACGAAAAAACAGGTTGCAGATCCTTTACCTAGGATACGCCCACTGTC
GACATTAAGCCAGAGAGCTCCAGGGTTGCTATAGTTCGCATCTGTGGCCA
ATGTGACCTTCCCGAACGTATATCAAACGTTCCTCGACGGCGTGGACTTT
ATCAACTTTGATTTGACCTGGGTTTTCTCGGCTGGGTGCTTCTTTGAGGT
CGATTTCCACGACCGTCTTCTATGGATAACAATTTCCCCTGCACTGGCTA
TGGGTGCGCTGGGGGCTACTTATATAGTCACGATGCGCAAAACTCAAATA
ATGATGGAGACCACAGTCAAAGATGTCCGGCAAAAACACGTTTCAGTGGC
ACTTCTGATTACGTTCCTGGTATACTCGAGCGTCAGCGCGGTTTTGTTTC
AAATGTTTGCCTGCGAAGAGCTCGACGACGACAAGTGGTATCTTCGGGCA
GATTACAGCATCGAGTGCGACTCCTCCAAACACATTGCTTTGCAAACCTA
CGCCGGGTTTATGATATTGTTGTACCCCATCGGGATACCGGCGCTGTACG
CCAGCCTATTGTTTTCAAATCGCCACGCGTTGCGGGACAAGGAAGGCCGG
GAAGAATCCCTTGCAGTAAGAGCAATTTCAGGCTTGTGGAAGCCATACAA
ACCCCAAAGATTATATTTCGAGGTGATTGAATGTGGGCGTCGAGTTTTCC
TGGCAGGAGTTGTGGTATTCATCTACCCGAATACCGCGGGTCAGATAGCG
GTTACTCTAACTATTGCAGCTGCATTTATGCTCGTGGCAGAGGCTATGGC
TCCATTCCAGTCACAATGGGATGCCTGGATAAGCCGGACGGGGCATGTGA
TCATTTTCATAAGCATGTACGTGGCTCTGTTGCTAAGGGTGGATGTGTCC
GACGAAAATGCATCCAGTCAGAAAACGTTTGAGGTTATATTAGTAGCTGC
TCATGGGTGCATGATTCTTGCTGTTTTAGTGGAGGCTATAATGATGGCAT
TGTCGTTGAGAACGAAAAAACAGGTTGCAGATCCTTTACCTAGGATACGC
CCACTGTCGACATTAAGCCAGAGAGCTCCAGGGTTGCTATAG
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