mRNA_H-elongata_contig52204.12518.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52204.12518.1
Unique NamemRNA_H-elongata_contig52204.12518.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A6H5JZ81_9PHAE (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ81_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 1.400e-164
Identity = 241/369 (65.31%), Postives = 275/369 (74.53%), Query Frame = 2
Query:    2 YRPRPWADPPEDPLSERAGQDD-GFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAV-----GVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRMEGEARRDLGDDYPGLPSEPAEILRLAREGEGPHGAPPR 1090
            YRP PW++PP DPLSERAGQ++  FLMKTSR+ T V GTA FS+LM VLN FELK+DEHYR F+  V  RP GVPLLTV NHCS +DDPGV V MLP  V  RPE MRWTICAQEICFK TAA   FG+AK MPI+RGSGIDQ LLLNFYRRL+ GGWCHIFPEGHCEQ G+LGGRA G  RDE GRLKWGVGKMIAHAPVTP+VIP+FHTGMAN++PI+P TRKIL ALPR+G+TVT RAG AI+F+DL+E+HE+R+G LRKLA+                                GG  GDV+WRSTREERQLY++I  RVEEALL++E EARRDLG  YPG P+E A +L      EG  G  PR
Sbjct:   26 YRPNPWSNPPSDPLSERAGQEEESFLMKTSRLFTFVTGTAAFSILMHVLNTFELKEDEHYRKFLSLVEERPSGVPLLTVCNHCSPVDDPGVLVGMLPARVTVRPELMRWTICAQEICFKWTAAGTGFGSAKVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQGGSLGGRAAGAGRDEHGRLKWGVGKMIAHAPVTPVVIPLFHTGMANLVPINPLTRKILHALPRMGHTVTARAGRAITFDDLLEDHERRHGRLRKLALPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEGDVLWRSTREERQLYSRIARRVEEALLQLEAEARRDLGQRYPGYPAESAALLAA----EGSEGGGPR 390          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: D7G278_ECTSI (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G278_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 3.700e-94
Identity = 153/309 (49.51%), Postives = 190/309 (61.49%), Query Frame = 2
Query:  143 LNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRS-TREERQLYNKITARVEEALLRMEGEARRDLGDDYPGLPSEPAEILRLAREGE 1066
            LN   L  DE +   ++ V +RP G PLLTVANH STLDDP V   +LP  +  RP  MRW++C+QEICF++ A  +FFGA K +PI RG G+DQ LLLNF R+L  GGWCHIFPEG   Q GT+GGR+P P   +LGRLKWGVG+MIAHAP TP V+P FHTGM N++  DP T+ +L   P+  N +TVR G AI  EDL+ +HE  +GPL K                        S  V  GG   +  W S +  ++QLY+ IT RVE AL  +E EAR +LGD YP +PS  A    LA  GE
Sbjct:   15 LNNTRLVKDERHARLVDLVRDRPEGEPLLTVANHASTLDDPAVMAVLLPWDIVVRPRLMRWSVCSQEICFETRAIASFFGAGKVLPIERGGGVDQKLLLNFSRKLAAGGWCHIFPEGKTVQTGTIGGRSP-PASSDLGRLKWGVGRMIAHAPRTPRVVPFFHTGMQNLVAEDPATKDVLPRQPQFLNDITVRVGDAIEVEDLLAQHEDEHGPLWKY-----------------------SAAVAQGGADDERKWASCSAADKQLYSAITRRVEAALHALEAEARLELGDAYPTIPSVVASGDYLALLGE 299          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A835ZF50_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF50_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.020e-81
Identity = 142/310 (45.81%), Postives = 179/310 (57.74%), Query Frame = 2
Query:   95 ITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRMEGEARRDLGDDYPGLP 1024
            +T+   T +   ++   N  ++KDDE Y+  I  +  RP G PLLTV NH STLDDP +F A  P SV   P  MRWTIC+QEICF +    AFFG+ K +PI RG GIDQ+ LL F RR+  G WCHIFPEG   Q G +GGR  G    E+G LKWGVGK+IAHAPV P ++P++HTGM NV+P  P TR +L   P  G+ +T R G  I  +DLIE++EK  GPL K    V K                   P           WRS+ +E  LY  IT RV+ AL  +E EAR +LG ++P  P
Sbjct:    1 MTISSVTTLSKAVLFGANDMKIKDDERYKHLIRCIKYRPEGKPLLTVGNHNSTLDDPALFGAFAPWSVDLTPRQMRWTICSQEICFMNA---AFFGSGKVLPIERGGGIDQVQLLKFARRMAAGTWCHIFPEGRTVQLGHMGGRM-GKNEAEIGTLKWGVGKLIAHAPVRPEIVPIYHTGMQNVVPEHPVTRDVLSPKPGTGHEITFRVGHPIVVDDLIEQYEKANGPLWKYTPSVAK-----------------DPPRFS--------WRSSSKELALYAAITRRVQTALEALEAEARAELGPNFPERP 281          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A835ZCU4_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU4_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.070e-74
Identity = 121/225 (53.78%), Postives = 155/225 (68.89%), Query Frame = 2
Query:    2 YRPRPWADPPEDPLSERAGQDDGFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAA-RPEFMRWTICAQEICFKSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRK 673
            YRP P++DPP+D L+ERA + +  LM  +R +  + GT     L++V N   +  DEHY AF+ AV  R  G PL+TV+NH   LDDP +  A++P  +AA +PE MR+TIC+Q+ICF +   ++FFGAAK MPI+RG GIDQ LL N  RRL +G WCHIFPEG C Q G+L GR  G  R  LGRLKWGVGK+IAHAP  P+V P+FHTGM  V P+ P +RK
Sbjct:   85 YRPTPYSDPPKDALAERAHEVEPLLMALTRRLLFLVGTVGCKALLQVANTCRITKDEHYAAFLRAVEARGNGTPLITVSNHACPLDDPCMLAALMPFRLAALKPELMRFTICSQDICFNNGVLESFFGAAKVMPIARGEGIDQRLLQNMQRRLASGAWCHIFPEGSCFQTGSLSGRT-GEGRQRLGRLKWGVGKLIAHAPCPPVVFPLFHTGMQGVTPLHPNSRK 308          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: L1K3X0_GUITC (Tafazzin family protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3X0_GUITC)

HSP 1 Score: 226 bits (577), Expect = 5.390e-68
Identity = 127/303 (41.91%), Postives = 168/303 (55.45%), Query Frame = 2
Query:  110 GTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTA--AQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLG----GRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRMEGEARRDL 1000
            G  V   LMR LN  ++ +D  + A++  + +RP G+PL+TVANH S  DDPG+  A+ P  VA  P  MRW +C QEICF         F G  +A+PI RG G+DQ LL +  R L  G W H+FPE    Q  T+G     R       E+GRLKWGVGK+IAH+PVTP++IP++H GMA VMP      ++L   PR G  V VR G  I  +DLI EHE  YGPL K+                   T  G Q  +   R     W ST++E+ LY+ IT R+E ALL++E +++  L
Sbjct:    4 GKLVSEFLMRRLNSLQVVEDSRHEAWLARIRSRPAGIPLITVANHESCCDDPGLMGALTPWDVAIDPIRMRWGLCTQEICFPKGKHLIHTFIGCGQALPIRRGGGVDQPLLFDVARELAAGRWVHVFPEARVVQSCTIGLDPLTRRTADELREMGRLKWGVGKLIAHSPVTPIIIPLYHKGMAGVMPQK---NRLLSVFPRGGGYVVVRFGEEIKVDDLISEHESLYGPLPKV-------------------TTEGLQDGIINCR-----WESTQQEKLLYSAITRRIEHALLKLEEDSKEAL 279          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: F0WJG4_9STRA (Tafazzin family protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJG4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.120e-66
Identity = 126/305 (41.31%), Postives = 173/305 (56.72%), Query Frame = 2
Query:   68 GFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICF-KSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRME 979
            G+L    RV T++  TAV    + V N+   + +E     ++ + NRP G  LLTV+NH +T+DDPG+F  +LP S+   P  +RW++C+QE C+ K   A A F +AK +PI RG+G+DQ LL + + R+  G W HIFPEG   QDG+LGGR  G  RD++GRLKWGVGK+IA A   P+VIP++H  M  +MP D    +++  LPR  N V VR G  I FEDL +E+EK                      ER   + A S             W S  +E+ LY+ IT R+EEALL +E
Sbjct:   51 GWLHNVGRVPTIIAATAVSKAYLHVFNRLSCEGNE---VLLDKLKNRPKGKALLTVSNHTATVDDPGIFAGILPWSLLT-PSNIRWSLCSQEYCYTKGRLASALFYSAKTLPIKRGAGVDQELLHDIFERIQDGQWVHIFPEGKITQDGSLGGRE-GADRDKIGRLKWGVGKLIARADTPPVVIPIYHFNMNKLMPQDE-NNEVINVLPRTNNEVFVRVGQPIDFEDLFQEYEK----------------------ERVKASNASS-------------WDSEEKEKVLYSAITRRIEEALLNLE 314          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A7S2NY36_9STRA (Tafazzin family protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NY36_9STRA)

HSP 1 Score: 221 bits (564), Expect = 9.420e-65
Identity = 130/312 (41.67%), Postives = 174/312 (55.77%), Query Frame = 2
Query:   68 GFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAV---LNRP-PGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDE----LGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRME 979
            G   + S++I L     V  + M   N F L  D+HY   I+ +    N P     ++TV+NH ST+DDP +F  +LP  +  RP  +RWT+C+QEICFK+ A  A FGA K +PI R  GIDQ LLL F R++  G W H+FPEG   Q GTLG    G R  E    +GRLKWGVGK+IAH+P   + +P ++TGM  V+P    T +I+   P  GN V +R G  I FEDLI EHE  +GPL+K             T     G+G G             +W+ST EE+ LY++IT R+E+ LL +E
Sbjct:   98 GLGFRISQMIALNVINFVIHVGMNYYNTFTLLKDDHYDFLIQTIRQETNNPGSNKAVITVSNHNSTIDDPVLFGLLLPWDLKLRPMKIRWTLCSQEICFKNPAIAAMFGAGKVLPIRRQGGIDQPLLLEFARKIAGGDWVHVFPEGKTNQGGTLGANYFGTRSREEAANIGRLKWGVGKLIAHSPKEVICVPFYNTGMEGVVP-QKETGEIVYVYPMGGNHVQIRVGGRIYFEDLIAEHESIHGPLKKY------------TTTPTNGSGNGIH-----------MWKSTEEEKLLYSRITKRIEDQLLDLE 385          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A024GSB4_9STRA (PlsC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSB4_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.350e-63
Identity = 129/305 (42.30%), Postives = 173/305 (56.72%), Query Frame = 2
Query:   68 GFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICF-KSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRME 979
            G+L    RV T++  TAV  + + VLN+     +E     +E + NRP G  LLTV+NH +T+DDPG+F  +LP S    P  +RW++C+QE C+ K   A   F +AK +PI RG+GI+Q LL + + R+  G W HIFPEG   QDG+LGGR  GP RD++GRLKWGVGK+IA A  TP+VIP++H  M  +MP D    +++  LPR  N V VR G  I FEDL  E+EK                      ER   + A S             W S  +E+ LY+ IT R+EEALL +E
Sbjct:  375 GWLHNVGRVPTVMAATAVSKMYLHVLNRLTCDGNE---VLLENLKNRPKGKALLTVSNHTATVDDPGIFAGILPWSFLT-PSRIRWSLCSQEYCYTKGRLASTLFYSAKTLPIKRGAGINQELLHDIFERIQDGQWVHIFPEGKITQDGSLGGRE-GPDRDKIGRLKWGVGKLIARADTTPVVIPIYHVNMNKLMPQDE-NNEVINVLPRANNHVFVRVGQPIDFEDLFREYEK----------------------ERVKASNAAS-------------WDSEEKEKILYSAITRRIEEALLNLE 638          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A7S3HNV6_9STRA (Tafazzin family protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNV6_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.240e-62
Identity = 123/315 (39.05%), Postives = 171/315 (54.29%), Query Frame = 2
Query:   41 LSERAGQDDGFLMKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKS---TAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRM 976
            L++ A +    L   +  I L+  TA     +  L   ++K+DE+Y  F++ V +R  G PLLTV+NH S  DDP +   +LPL +A +P + R  IC+QE C  S   T    + G  + +PI RG+GI+Q LLL+F R +  G WCH+FPEG   Q  TLGGR  G  + ELG+LKWG+GK+IAHAPVTP V+P +  G   + P D   + +   LP  G+ V +R G  I F+D I EHEK YG L K    + +    G   E +                    W S  E+  LY KIT+R+EEAL ++
Sbjct:   23 LADFANERKPELYTLASSIVLLVTTAAVRTFLFCLGDCKIKEDENYDNFLKKVTDREKGTPLLTVSNHRSLFDDPAIMSGILPLQLAVQPRYNRNAICSQEYCCVSKLPTPMHVYTGLGRVLPIKRGAGINQKLLLDFARLVAAGEWCHVFPEGGIWQWDTLGGRRNGHEK-ELGKLKWGIGKLIAHAPVTPEVVPFYFKGTETIYPQDE-NKVVKNKLPIPGHKVNIRFGEEIRFDDFIAEHEKIYGALWKYKASLKQESTYGTEKESEF----------------HEYWDSRPEDLLLYAKITSRIEEALTKL 319          
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Match: A0A7S0XWS2_HEMAN (Tafazzin family protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWS2_HEMAN)

HSP 1 Score: 212 bits (540), Expect = 5.260e-61
Identity = 125/328 (38.11%), Postives = 176/328 (53.66%), Query Frame = 2
Query:   77 MKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPLLTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICF-KSTAAQAFFGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGRAPGPRR----DELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRK-----------ILRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAV-GVGKARRKGETIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRMEGEARRDLGDD 1009
            +  +R I +   T++  LLM +LNK +  DDE YR    ++ +RP GVPLLTV+NH S+LDDPG+  +++P  V   P  +RW I  Q+I F K    Q+F    + +P+ RG GID  LLL+F R++  G W H+FPE    Q G L       R     +E G+LKWG GK+IAH+ V PLVIP +H GM  V+P     RK           ++   P  GN V V  G  I  +DL++ +E  +G L K++  GV      G  +ER                     WRS+ EE++LY+ IT RVEEAL  ++  A+RDL ++
Sbjct:   84 LSIARSIVVFLTTSLCKLLMNILNKVQWVDDECYRFLQSSIRHRPAGVPLLTVSNHQSSLDDPGLMSSLIPWDVIMTPSRVRWAIATQDIVFPKKPFVQSFMTCGQVLPVHRGGGIDHALLLDFARQMAAGRWVHVFPEARVVQSGRLATDVLTKRSREDLEEKGKLKWGTGKLIAHSKVPPLVIPFYHLGMVGVLPQHNVWRKRDNGESYFHNNVVSWNPTWGNKVKVWVGEPIETQDLLDAYEAEHGALWKVSPEGVASEEEFGRLVER---------------------WRSSDEEKELYSAITRRVEEALEGLQRRAKRDLEEE 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52204.12518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ81_9PHAE1.400e-16465.31Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G278_ECTSI3.700e-9449.51Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZF50_9STRA1.020e-8145.81Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCU4_9STRA2.070e-7453.78Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
L1K3X0_GUITC5.390e-6841.91Tafazzin family protein n=1 Tax=Guillardia theta (... [more]
F0WJG4_9STRA3.120e-6641.31Tafazzin family protein n=1 Tax=Albugo laibachii N... [more]
A0A7S2NY36_9STRA9.420e-6541.67Tafazzin family protein n=1 Tax=Leptocylindrus dan... [more]
A0A024GSB4_9STRA1.350e-6342.30PlsC domain-containing protein n=1 Tax=Albugo cand... [more]
A0A7S3HNV6_9STRA4.240e-6239.05Tafazzin family protein n=2 Tax=Spumella elongata ... [more]
A0A7S0XWS2_HEMAN5.260e-6138.11Tafazzin family protein (Fragment) n=2 Tax=Hemisel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52204contigH-elongata_contig52204:210..3990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.4
Seed ortholog evalue1.2e-122
Seed eggNOG ortholog2880.D7FH08
KEGG rclassRC00004,RC00037
KEGG koko:K13511
KEGG ReactionR09037
KEGG Pathwayko00564,map00564
EggNOG free text desc.cardiolipin acyl-chain remodeling
EggNOG OGsKOG2847@1,KOG2847@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcyltransferase, putative
Ec32 orthologEc-26_003030.1
Exons4
Model size1257
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52204.12518.1prot_H-elongata_contig52204.12518.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52204 286..3832 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930853.7759824-UTR-H-elongata_contig52204:209..2851622930853.7759824-UTR-H-elongata_contig52204:209..285Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52204 210..285 +
1691679598.6560178-UTR-H-elongata_contig52204:209..2851691679598.6560178-UTR-H-elongata_contig52204:209..285Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52204 210..285 +
1622930853.8763661-UTR-H-elongata_contig52204:3832..39901622930853.8763661-UTR-H-elongata_contig52204:3832..3990Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52204 3833..3990 +
1691679598.7252254-UTR-H-elongata_contig52204:3832..39901691679598.7252254-UTR-H-elongata_contig52204:3832..3990Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52204 3833..3990 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930853.7997727-CDS-H-elongata_contig52204:285..3591622930853.7997727-CDS-H-elongata_contig52204:285..359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 286..359 +
1691679598.6683042-CDS-H-elongata_contig52204:285..3591691679598.6683042-CDS-H-elongata_contig52204:285..359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 286..359 +
1622930853.815983-CDS-H-elongata_contig52204:1265..15061622930853.815983-CDS-H-elongata_contig52204:1265..1506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 1266..1506 +
1691679598.6780012-CDS-H-elongata_contig52204:1265..15061691679598.6780012-CDS-H-elongata_contig52204:1265..1506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 1266..1506 +
1622930853.851542-CDS-H-elongata_contig52204:1823..19201622930853.851542-CDS-H-elongata_contig52204:1823..1920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 1824..1920 +
1691679598.6973577-CDS-H-elongata_contig52204:1823..19201691679598.6973577-CDS-H-elongata_contig52204:1823..1920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 1824..1920 +
1622930853.865279-CDS-H-elongata_contig52204:3221..38321622930853.865279-CDS-H-elongata_contig52204:3221..3832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 3222..3832 +
1691679598.7143703-CDS-H-elongata_contig52204:3221..38321691679598.7143703-CDS-H-elongata_contig52204:3221..3832Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52204 3222..3832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52204.12518.1

>prot_H-elongata_contig52204.12518.1 ID=prot_H-elongata_contig52204.12518.1|Name=mRNA_H-elongata_contig52204.12518.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=341bp
MKTSRVITLVGGTAVFSLLMRVLNKFELKDDEHYRAFIEAVLNRPPGVPL
LTVANHCSTLDDPGVFVAMLPLSVAARPEFMRWTICAQEICFKSTAAQAF
FGAAKAMPISRGSGIDQLLLLNFYRRLVTGGWCHIFPEGHCEQDGTLGGR
APGPRRDELGRLKWGVGKMIAHAPVTPLVIPVFHTGMANVMPIDPFTRKI
LRALPRLGNTVTVRAGPAISFEDLIEEHEKRYGPLRKLAVGVGKARRKGE
TIERQVGTGAGSQPVLPGGRGGDVIWRSTREERQLYNKITARVEEALLRM
EGEARRDLGDDYPGLPSEPAEILRLAREGEGPHGAPPRFG*
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mRNA from alignment at H-elongata_contig52204:210..3990+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52204.12518.1 ID=mRNA_H-elongata_contig52204.12518.1|Name=mRNA_H-elongata_contig52204.12518.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3781bp|location=Sequence derived from alignment at H-elongata_contig52204:210..3990+ (Himanthalia elongata Himel1 dioecious)
TTACCGGCCACGACCCTGGGCAGATCCCCCCGAAGACCCCCTCTCCGAGC GAGCGGGACAAGATGATGGCTTCCTGATGAAGACATCAAGGGTGATCACT TTAGTGGGAGGAACCGCCGTATTTTCTCTCCTCATGCGTGTCCTCAACAA GTGAGCCCTGATGCCGAGAGAAGCAAGCCAAGGCTTGAGGTACAATGCTA GACAATAGTCGGGCGAAAAATCGAAAAGTGGGAAGGAAGAGAACCCCCCT CCCACACTCTGACTATCGACCATCCAATCCGTCACAACCCCCCTCCCCCC TCCCATCTACTGCAAACGCCTCCTCGCAGGCTGTTCCCTTATTTTGTTCT AGCGTTTGCTGCCTCGACATGTACCAANNNNNNNNNNTTTTCTGTCCCCA CATGTACCAATTCACAGTTTTTTTTATGTATCGTTTTTTTTTTCCGCTGT GTCGTAACCCCCCCCCCCCCTCTCGCACGCATGATTTCTGACTCACTGTG CTACCGTTTGCATGGCTTAGCATCCCTCTTCAACCGCCCGAATCGGCGCC GTTAAACTCTTGATCGTCAAACTCGCCGCTAATCCCCCTCAACCCTTCCA CCCAACACAGCGCACATACGTGTCTTGGCATATGATATTATACACACGGG GGAAAGCTCTCTTGTGTGACCGTAAGGGAAGTAACCACCGCGCAACCCAG CTCCAGCGCTCGCGACGCTCCCATCCTTTTTGTTTCCTGTGCTGTGTACC TGTGTGCGGCGATTCGCTCCCGTCGGGCCGAGTCGTACGAACGAAATATA GCGCGACTGAAATTGCCGACTTTCTTGCACCACTGATCGACGGTTCATCG CAGGGATCGACCAACCAGCGGCGACTAGCGCTCTGGCCCAACCCCCTCAA ACCAAGTTACATTTCACCTTCCACCGGTGGACCGAGTGTATAGACTTACA CCTTCATAGCGGTTGTGGCAGCGACGAGTTGAGGCTGGCCCTGTCGCCGA TCCTCAACCGCCACCCCCCACACACACAGACACCGTCTCAATGAAACCCG CGGCAGGTTCGAGCTGAAGGACGATGAGCACTACAGAGCTTTCATCGAAG CGGTCCTAAACAGGCCGCCCGGGGTCCCGCTCCTCACCGTGGCGAACCAC TGCTCCACCTTGGACGATCCCGGCGTCTTCGTGGCTATGCTGCCGCTGAG CGTGGCGGCGAGGCCGGAGTTCATGCGCTGGACGATCTGTGCGCAGGAGA TCTGCTTCAAGTCGACGGCGGCGCAAGCGTTCTTCGGTGCGGCAAAGGTG CGAGTGTACCCCGCATCGTCCTCTGGCCTCTCCTTCCCTGCCGCTGAACC CGTCTCAGAAGGAAGAGGAGCCACAGCACTGGCTGCGTCATGCGTCTTCC CGCACTCCCCCGCCACCTCTTCCTTTCTATAAGAAGGCGTTTTTCATGTT GAATTAACCCGATCGGTCCGATTTTCCCCGACGTGGGCGTCCTCCTAATA GTCGCTTGTCCTTTGCCACTCATGATTATTTAATGTGTGTTATTTTTAGA GCAGAAATGGCGCGATCATTACAGATGTGTATATGGGATTTCCCCCCAAC TCCCGTGCTGTCAGGCGATGCCGATCTCCAGGGGAAGCGGGATAGACCAA CTTTTGCTGCTGAACTTCTACCGCAGATTGGTCACGGGAGGCTGGTGTCA TATTTTCCCAGGTGCTATGGGACTTCCCCCGCGCCCCGCCGTGTCACGCT CCTTGCCTATGAGGTTTCCGTGTCATCCCCATTTTTCTAGTAAGTTTATC GTAGTCGAGGCGCAGACGACCAATGTCGAGATAACTGCGAGGCGCAATAC GCGCATGGGCTGTCGGCAAACCAAGCCGGTTGTAAGCCATTTGTGAGATA CTTTTCTTAGATCTGCGGAAGGTCTCGTCGCCCAAGCAGTCTGCGGAAAT CAAGAGTCCGATTCTTACCAGTATAATTCTCCTTTTTTATATATGTAGTC CAAAACGGGAGAATTGGAATAACCATTGTGTAGTTGACGAGGTGCAGTTT CCGAAACTGTCTGTGACTGTATCGCACATGTCCACTGTACCCATAGTGAG TGTGGGAAAAGAGAGGCGCACAATAGTTGGTCCATGGGGTCATCTGAATA GGCGGTCAATCGGTCGTAAGCGCCATCGGTACGCAATTGCGTGACCTGAT GAAATCGGGATTGGCCCGATGGTGGTTGACGGTAGAGATGGACGCCGTCG TGAAAAACGACCGGATCGAGAGGATCCCGAGAGTACGCACCAGATTCAGT CTAGGTTGAGAGAATGAGCGGACTGACCATGGACGGGACAGCCGAAGCCG TCTCGCGAGGCCAATTTTTCAGGCGCGAACGGGGAGAGGAAAAATAAATA AATTCCTTCTCAGCTGATCACAAGCAGGAGACAACCAAATCCGGTTGATC CTTACTCTCTGCTACATAGCGATGACATCATGACCACATATAATTGTAAG AGTGCTGCTAATATTAATTTGCGTCTCGATAAAGATAAGGAGGCGTGAAG AGGGGAAATATAGAGAGATGAGTAAATCAGACCAATCAGATCTCCCTTAG GACTACAGGCTGGATGAGCAAGGTAACATTGCATGCAGTAGGTTGAGTCA GCCCCATCATCATGCATACATAAAATGTTTCTTTTTTAAAATCATGCTTA TATATCGGCAGGGTAGCGATTTTTTGCAGATGGAAAAATTGTGCTAAGAA GGCATGGATGTTCGAAGGGTTTGGAATGAGTTCATATGTTTCTTAAAATG AAAACACCGTACTCGTAGAAAGGCGAATTTCGACGCGAGCGCTCGAGCTC CCACATCATTAATGTTATTAAAGGAAATATGGTTATTTCTTCCGTCTCAA CTGCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCGCCCCCCCCCCCGACCGCCCCCCCCGCCGCGCGCTTCCCC GATCCCCTCCAGAGGGGCACTGCGAGCAGGATGGTACCCTCGGTGGCCGT GCCCCGGGTCCCAGGCGTGACGAGCTCGGCAGGCTCAAGTGGGGCGTCGG CAAGATGATCGCGCACGCCCCGGTGACGCCCTTGGTGATCCCCGTGTTCC ACACCGGCATGGCCAACGTCATGCCGATCGACCCGTTCACGAGGAAGATC CTGCGGGCCTTGCCGCGGCTGGGGAACACCGTGACGGTGCGCGCGGGTCC GGCCATCTCGTTCGAGGACCTGATCGAGGAGCACGAAAAACGGTACGGCC CCCTCAGAAAGTTGGCCGTTGGTGTAGGGAAGGCGAGAAGGAAAGGGGAG ACCATCGAAAGGCAGGTGGGAACTGGAGCTGGATCCCAACCTGTGCTCCC GGGTGGAAGAGGGGGAGACGTCATCTGGAGGTCCACTCGCGAGGAACGGC AGCTGTACAACAAGATCACGGCAAGAGTCGAGGAGGCGTTGCTCAGGATG GAGGGGGAAGCAAGGCGGGACTTAGGGGATGATTACCCGGGCCTGCCGTC GGAACCCGCCGAAATTCTCCGGCTTGCAAGAGAGGGCGAAGGTCCGCACG GCGCGCCTCCCCGTTTCGGTTAAAAGCACTGCGAGCGGTTCGTACTTTTG ATTGCGTCCGTCAACGGCGCTCTGGGTTGTGAGGGGAGCGGACCCCTCCT TTCACTGCGTGCGTAGAAGAATTTGACATATTAGGTCTACAGCTGCAGAC TTTCGTCGGTCTCGTCCGCTTATTTGCGGAA
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Coding sequence (CDS) from alignment at H-elongata_contig52204:210..3990+

>mRNA_H-elongata_contig52204.12518.1 ID=mRNA_H-elongata_contig52204.12518.1|Name=mRNA_H-elongata_contig52204.12518.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2046bp|location=Sequence derived from alignment at H-elongata_contig52204:210..3990+ (Himanthalia elongata Himel1 dioecious)
ATGAAGACATCAAGGGTGATCACTTTAGTGGGAGGAACCGCCGTATTTTC
TCTCCTCATGCGTGTCCTCAACAAATGAAGACATCAAGGGTGATCACTTT
AGTGGGAGGAACCGCCGTATTTTCTCTCCTCATGCGTGTCCTCAACAAGT
TCGAGCTGAAGGACGATGAGCACTACAGAGCTTTCATCGAAGCGGTCCTA
AACAGGCCGCCCGGGGTCCCGCTCCTCACCGTGGCGAACCACTGCTCCAC
CTTGGACGATCCCGGCGTCTTCGTGGCTATGCTGCCGCTGAGCGTGGCGG
CGAGGCCGGAGTTCATGCGCTGGACGATCTGTGCGCAGGAGATCTGCTTC
AAGTCGACGGCGGCGCAAGCGTTCTTCGGTGCGGCAAAGGTTCGAGCTGA
AGGACGATGAGCACTACAGAGCTTTCATCGAAGCGGTCCTAAACAGGCCG
CCCGGGGTCCCGCTCCTCACCGTGGCGAACCACTGCTCCACCTTGGACGA
TCCCGGCGTCTTCGTGGCTATGCTGCCGCTGAGCGTGGCGGCGAGGCCGG
AGTTCATGCGCTGGACGATCTGTGCGCAGGAGATCTGCTTCAAGTCGACG
GCGGCGCAAGCGTTCTTCGGTGCGGCAAAGGCGATGCCGATCTCCAGGGG
AAGCGGGATAGACCAACTTTTGCTGCTGAACTTCTACCGCAGATTGGTCA
CGGGAGGCTGGTGTCATATTTTCCCAGGCGATGCCGATCTCCAGGGGAAG
CGGGATAGACCAACTTTTGCTGCTGAACTTCTACCGCAGATTGGTCACGG
GAGGCTGGTGTCATATTTTCCCAGAGGGGCACTGCGAGCAGGATGGTACC
CTCGGTGGCCGTGCCCCGGGTCCCAGGCGTGACGAGCTCGGCAGGCTCAA
GTGGGGCGTCGGCAAGATGATCGCGCACGCCCCGGTGACGCCCTTGGTGA
TCCCCGTGTTCCACACCGGCATGGCCAACGTCATGCCGATCGACCCGTTC
ACGAGGAAGATCCTGCGGGCCTTGCCGCGGCTGGGGAACACCGTGACGGT
GCGCGCGGGTCCGGCCATCTCGTTCGAGGACCTGATCGAGGAGCACGAAA
AACGGTACGGCCCCCTCAGAAAGTTGGCCGTTGGTGTAGGGAAGGCGAGA
AGGAAAGGGGAGACCATCGAAAGGCAGGTGGGAACTGGAGCTGGATCCCA
ACCTGTGCTCCCGGGTGGAAGAGGGGGAGACGTCATCTGGAGGTCCACTC
GCGAGGAACGGCAGCTGTACAACAAGATCACGGCAAGAGTCGAGGAGGCG
TTGCTCAGGATGGAGGGGGAAGCAAGGCGGGACTTAGGGGATGATTACCC
GGGCCTGCCGTCGGAACCCGCCGAAATTCTCCGGCTTGCAAGAGAGGGCG
AAGGTCCGCACGGCGCGCCTCCCCGTTTCGGTTAAAGGGGCACTGCGAGC
AGGATGGTACCCTCGGTGGCCGTGCCCCGGGTCCCAGGCGTGACGAGCTC
GGCAGGCTCAAGTGGGGCGTCGGCAAGATGATCGCGCACGCCCCGGTGAC
GCCCTTGGTGATCCCCGTGTTCCACACCGGCATGGCCAACGTCATGCCGA
TCGACCCGTTCACGAGGAAGATCCTGCGGGCCTTGCCGCGGCTGGGGAAC
ACCGTGACGGTGCGCGCGGGTCCGGCCATCTCGTTCGAGGACCTGATCGA
GGAGCACGAAAAACGGTACGGCCCCCTCAGAAAGTTGGCCGTTGGTGTAG
GGAAGGCGAGAAGGAAAGGGGAGACCATCGAAAGGCAGGTGGGAACTGGA
GCTGGATCCCAACCTGTGCTCCCGGGTGGAAGAGGGGGAGACGTCATCTG
GAGGTCCACTCGCGAGGAACGGCAGCTGTACAACAAGATCACGGCAAGAG
TCGAGGAGGCGTTGCTCAGGATGGAGGGGGAAGCAAGGCGGGACTTAGGG
GATGATTACCCGGGCCTGCCGTCGGAACCCGCCGAAATTCTCCGGCTTGC
AAGAGAGGGCGAAGGTCCGCACGGCGCGCCTCCCCGTTTCGGTTAA
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