mRNA_H-elongata_contig52054.12491.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52054.12491.1
Unique NamemRNA_H-elongata_contig52054.12491.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.480e-36
Identity = 84/140 (60.00%), Postives = 90/140 (64.29%), Query Frame = 2 
Query: 1340 KRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            KRSGK+VL+AEPNNL N NS+KYSGLANSKAVGIQF +D K RPCAAI LKSSKN  KP KSVG+SLLKKT PSVSQAI KQ                                     TGG+ YRPDLQ AALVRWSKV
Sbjct:   28 KRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSSKNGNKPKKSVGRSLLKKTHPSVSQAIMKQ-------------------------------------TGGTNYRPDLQHAALVRWSKV 130
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BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.640e-16
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 2 
Query: 1340 KRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIK 1579
            +RSG++VLS EP NL N +SFKYSGLANSKAVGI    D KGRPC  +  KSSK   +P K+V ++LLKK   S ++A+K
Sbjct:   28 RRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKKVNQPAKAVAQTLLKKNNRSSARAVK 107
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.220e-10
Identity = 56/143 (39.16%), Postives = 65/143 (45.45%), Query Frame = 2 
Query: 1340 KRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQF-----DEDVKGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWS 1753
            KRSG IVLS+EP NL N N+FKYSGLANSKA+   F     D+D K +   ++ LK SKN K+PNK      L K F  V + IK Q                                     T    YR DL  AAL RWS
Sbjct:   28 KRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIK--MSMGLKISKNGKRPNKQYSTIPLNKDFRRVEKCIKAQ-------------------------------------TVDQAYRADLLDAALARWS 131
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BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: L1JIS0_GUITC (Large subunit ribosomal protein L28e, cytoplasmic n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JIS0_GUITC)

HSP 1 Score: 66.6 bits (161), Expect = 3.190e-9
Identity = 53/151 (35.10%), Postives = 73/151 (48.34%), Query Frame = 2 
Query: 1304 REMTSFFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSK 1756
            R  +SF ++   + SG+I LS +P NLMNKNSFKYSGLAN K+  I+  E+ KG     +  K +K    P KSV K +  + F    +  KK    V+                               +T G YYRPDL+++AL RW+K
Sbjct:   15 RSNSSFLVK---RESGRIQLSKDPFNLMNKNSFKYSGLANGKSADIRQYEN-KG---IVLTTKLTKAATSPAKSVRKVVCSRDF---ERNFKKVANCVS-------------------------------KTVGGYYRPDLEKSALARWTK 124
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A7S4I2J4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I2J4_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 2.890e-8
Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 2 
Query: 1364 SAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTK-----KPNKSVGKSLLKKT-FPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            ++EPNNLMNK++FK+SGLAN  AVG+ F+ D  G      C+ S+K+ K     +P K+  ++  K + F  V++AIK +                                     T G YYR DL  AAL RWS++
Sbjct:   26 TSEPNNLMNKHAFKWSGLANKDAVGVDFNRDANGNVTKG-CVLSTKSRKSSLRRQPAKTWNRTTFKTSDFRRVAKAIKSE-------------------------------------TQGKYYRRDLTNAALARWSQI 125
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A445CFG7_ARAHY (Ribosomal_L28e domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445CFG7_ARAHY)

HSP 1 Score: 64.3 bits (155), Expect = 4.310e-8
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = 2 
Query: 1319 FFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVG---KSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            F ++   + +  +  S E NNL N NSFKYSGLAN K V IQ      G+   A+ L ++K TKK NK      KS++KK FP +++A+KKQV                                       +YYRPDL +AAL R S V
Sbjct:   42 FLVKEFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQ----PAGKD-QAVLLATTK-TKKQNKPAALLHKSIMKKEFPRMAKAVKKQVA-------------------------------------ANYYRPDLTKAALARLSAV 148
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A6A1W052_9ROSI (60S ribosomal protein L28-1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1W052_9ROSI)

HSP 1 Score: 63.2 bits (152), Expect = 6.530e-8
Identity = 52/151 (34.44%), Postives = 74/151 (49.01%), Query Frame = 2 
Query: 1316 SFFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVG---KSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            SF ++   + +  +  S EPNNL N N++K+SGLAN K V IQ     +G+   ++ L ++K TKK NK V    KS++KK FP ++ A+  QV                             AD        +YYRPDL++AAL R S V
Sbjct:   18 SFLVKQFGRGTASVQFSKEPNNLYNLNTYKHSGLANKKTVTIQ----AEGKD-QSVLLATTK-TKKQNKPVALLHKSVMKKEFPRMANAVANQV-----------------------------AD--------NYYRPDLKKAALARLSAV 125
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A7J7L6F9_9MAGN (Ribosomal_L28e domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L6F9_9MAGN)

HSP 1 Score: 63.2 bits (152), Expect = 6.530e-8
Identity = 50/149 (33.56%), Postives = 69/149 (46.31%), Query Frame = 2 
Query: 1316 SFFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKS-SKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            SF I+     S  +  S E NNL N NSFK+SGLAN+K V IQ     +G+  A +   + +K   +P K V KS++KK F  +++A+K QVG                                      ++YRPDL+ AAL R S V
Sbjct:   18 SFLIKEFGNGSQMVQFSKETNNLYNLNSFKHSGLANTKTVSIQ----AEGKDQAVVLATTKTKKQNQPGKLVHKSVMKKEFRRMAKAVKNQVG-------------------------------------DNFYRPDLKDAALARLSVV 125
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A7S3BCU1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BCU1_9EUKA)

HSP 1 Score: 62.0 bits (149), Expect = 1.540e-7
Identity = 44/128 (34.38%), Postives = 59/128 (46.09%), Query Frame = 2 
Query: 1370 EPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWS 1753
            EPNNL   NS+K+SGLAN K VG+    D KG        K+ + +K P KS+ K  L K F  V++AIK++VG                                      ++YRPDL+ AAL +WS
Sbjct:   49 EPNNLKGTNSYKFSGLANPKTVGLAAAADGKGVVMTKKITKADRLSK-PKKSLQKITLTKDFRRVAKAIKQEVG-------------------------------------ANFYRPDLESAALAKWS 138
[Close]
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Match: A0A218XQK3_PUNGR (60S ribosomal protein L28-2-like n=3 Tax=cellular organisms TaxID=131567 RepID=A0A218XQK3_PUNGR)

HSP 1 Score: 62.0 bits (149), Expect = 1.650e-7
Identity = 48/150 (32.00%), Postives = 70/150 (46.67%), Query Frame = 2 
Query: 1316 SFFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDVKGRPCAAICLKSSKNTK--KPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRIFYSRFPCYRLSQHTLVRLSPGGADLT**RTGGSYYRPDLQRAALVRWSKV 1759
            SF ++   + +  +  S EPNNL N NS+K+SGLAN K V IQ +   +     A+ L ++K  K  KP + + KS++KK F  +++A+  QVG                                      +YYRPDL+ AAL R S V
Sbjct:   18 SFLVKEFGRGTASVQFSKEPNNLYNLNSYKHSGLANRKTVAIQPEGKEQ-----AVLLATTKTKKQSKPAQLLHKSVMKKEFSRMAEAVVNQVG-------------------------------------DNYYRPDLKSAALARLSAV 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52054.12491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC2_9PHAE6.480e-3660.00Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]
A0A836CDH5_9STRA6.640e-1657.50Putative 60S ribosomal protein L28 n=1 Tax=Tribone... [more]
A0A7S2DNV5_9STRA3.220e-1039.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L1JIS0_GUITC3.190e-935.10Large subunit ribosomal protein L28e, cytoplasmic ... [more]
A0A7S4I2J4_9EUKA2.890e-833.33Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A445CFG7_ARAHY4.310e-835.33Ribosomal_L28e domain-containing protein n=3 Tax=A... [more]
A0A6A1W052_9ROSI6.530e-834.4460S ribosomal protein L28-1 n=1 Tax=Morella rubra ... [more]
A0A7J7L6F9_9MAGN6.530e-833.56Ribosomal_L28e domain-containing protein n=1 Tax=K... [more]
A0A7S3BCU1_9EUKA1.540e-734.38Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A218XQK3_PUNGR1.650e-732.0060S ribosomal protein L28-2-like n=3 Tax=cellular ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52054contigH-elongata_contig52054:2..4025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.2
Seed ortholog evalue2.2e-26
Seed eggNOG ortholog2880.D8LGI5
Preferred nameRPL28
KEGG rclassRC00002,RC00031
KEGG koko:K00026,ko:K02903,ko:K06210
KEGG ReactionR00137,R00342,R03005,R07136
KEGG Pathwayko00020,ko00270,ko00620,ko00630,ko00710,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,map00020,map00270,map00620,map00630,map00710,map00760,map01100,map01110,map01120,map01130,map01200,map03010
KEGG ModuleM00009,M00011,M00012,M00115,M00168,M00171,M00177
GOsGO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0022625,GO:0022626,GO:0030425,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0035770,GO:0036464,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044297,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044463,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097447,GO:0097458,GO:0120025,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsKOG3412@1,KOG3412@2759
Ec32 ortholog description60S ribosomal protein L28
Ec32 orthologEc-10_001940.1
EC1.1.1.37,2.7.7.1,2.7.7.18
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categorymitochondrion
Exons6
Model size2979
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52054.12491.1prot_H-elongata_contig52054.12491.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52054 1311..2328 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930851.0919118-UTR-H-elongata_contig52054:1..13101622930851.0919118-UTR-H-elongata_contig52054:1..1310Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2..1310 +
1691679597.458946-UTR-H-elongata_contig52054:1..13101691679597.458946-UTR-H-elongata_contig52054:1..1310Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2..1310 +
1622930851.1554585-UTR-H-elongata_contig52054:2328..23341622930851.1554585-UTR-H-elongata_contig52054:2328..2334Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2329..2334 +
1691679597.507377-UTR-H-elongata_contig52054:2328..23341691679597.507377-UTR-H-elongata_contig52054:2328..2334Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2329..2334 +
1622930851.1861281-UTR-H-elongata_contig52054:2369..26051622930851.1861281-UTR-H-elongata_contig52054:2369..2605Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2370..2605 +
1691679597.5210335-UTR-H-elongata_contig52054:2369..26051691679597.5210335-UTR-H-elongata_contig52054:2369..2605Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2370..2605 +
1622930851.2042255-UTR-H-elongata_contig52054:2773..34051622930851.2042255-UTR-H-elongata_contig52054:2773..3405Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2774..3405 +
1691679597.5319026-UTR-H-elongata_contig52054:2773..34051691679597.5319026-UTR-H-elongata_contig52054:2773..3405Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 2774..3405 +
1622930851.2250261-UTR-H-elongata_contig52054:3610..40251622930851.2250261-UTR-H-elongata_contig52054:3610..4025Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 3611..4025 +
1691679597.5418472-UTR-H-elongata_contig52054:3610..40251691679597.5418472-UTR-H-elongata_contig52054:3610..4025Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig52054 3611..4025 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930851.1120667-CDS-H-elongata_contig52054:1310..13451622930851.1120667-CDS-H-elongata_contig52054:1310..1345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 1311..1345 +
1691679597.4720256-CDS-H-elongata_contig52054:1310..13451691679597.4720256-CDS-H-elongata_contig52054:1310..1345Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 1311..1345 +
1622930851.1298532-CDS-H-elongata_contig52054:1742..18901622930851.1298532-CDS-H-elongata_contig52054:1742..1890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 1743..1890 +
1691679597.479959-CDS-H-elongata_contig52054:1742..18901691679597.479959-CDS-H-elongata_contig52054:1742..1890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 1743..1890 +
1622930851.1432443-CDS-H-elongata_contig52054:2130..23281622930851.1432443-CDS-H-elongata_contig52054:2130..2328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 2131..2328 +
1691679597.4876406-CDS-H-elongata_contig52054:2130..23281691679597.4876406-CDS-H-elongata_contig52054:2130..2328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52054 2131..2328 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52054.12491.1

>prot_H-elongata_contig52054.12491.1 ID=prot_H-elongata_contig52054.12491.1|Name=mRNA_H-elongata_contig52054.12491.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MTSFFIRTVMKRSGKIVLSAEPNNLMNKNSFKYSGLANSKAVGIQFDEDV
KGRPCAAICLKSSKNTKKPNKSVGKSLLKKTFPSVSQAIKKQVGFVACRI
FYSRFPCYRLSQHTLVRLSPGGADLT*
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mRNA from alignment at H-elongata_contig52054:2..4025+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52054.12491.1 ID=mRNA_H-elongata_contig52054.12491.1|Name=mRNA_H-elongata_contig52054.12491.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4024bp|location=Sequence derived from alignment at H-elongata_contig52054:2..4025+ (Himanthalia elongata Himel1 dioecious)
AAAAAGAAAAAGAAAAAAAAAAAAAAACGGGATAGAATATACAGAGAGAC
AAGAAAAAGTTCTGGCCTTGCACAAAACGGTGTACGGCTTCAGACCCCGA
CTTCAGGTAGAAAGCGAAACTCAGTATGAACAGGGTGTTGTTTCCCTTCT
ATTTTTTAACAAACCGATTTTGCCAATTTCCGGTGGCGTAGCAACAAAAA
GGGACGATATCCCATATATCCCATTTTCGGCTGCCCCCTCGAGAGGTCGG
TTAGTCACAGTAGAGCATTTATTCCCTGTTGAGCTGGCCCCAAGCAGGAA
TCAACAAAATCCAGTTGATTACATCATGACCACACACTACCTTGGGCGGC
AGTAAACTCACTAGGCTTTGAGGATCACGTGCAGATAGACTTGTTGTAGT
TGTCGGGTCGGTCAAGATGGAAAACGCTCCTCTGCACTTTCGTGTCGTAT
AGTTAATTATATTCGCCCTCACTACTCGGCCACAACCTCAACGGTCGCTG
GGCACGTGAGGGCCTCTCCGGCTTGCTTTTTTTAAGTAGCCGGGAGGGCA
GCGGTTGGCAAACATCTGGCGCGACCGTACGATTTGTTTAGCCTCGTCGT
CGATCAAAGCTCGAATTGCTCTTTGTATACCAAGTATGTCCTATTTTTCA
GTCCATGCGGGAGTTGCCTTCAGCTCGTAGGAGCCAAGCCAGTCACTTTA
CTACGATCAGAGGCACCAAATCGAGCCCAAGGGAGTCCTTCGTGTGTGAC
GTAGAACTAGCTTCCGACGTTGATATCAGTAACATCCCTGTGGCAGAGTA
TTATCCTTGAATGAGTATACATCACTCTCTGTAATAAATAGCAGGTTGGT
CACTTGTACGACCCGTTTACATTCAAAGGTTCCTAGTTTTATCGGTAATC
GCTCACCTCGATTCGCCCCATGTTAGCATTATTTTGCGAGCACCAGCTGC
GGAGACTAATCTTCTACAATTTGGAAGGGCTTGGTAATCAGCAACACACT
CTTCCCCGAAAAACAACGGACCAACACCCCCTCGAGACCCTTTTGTTTCC
CGAAAAGCGTTTGGCCGGTAAAACTGTTCAAATCACCCACCGGATTTTCT
TACTTCAAAAATATATTTTTCACCTTTAAATTAGGCGTTTTCCACCCAAG
GTTTATTGCTGAAACCTTGAAAGCGATCACATAAACAACCAAACGACGGT
GTCCGTTGCCGCAGACATCCTAACCTCTGTGGGGCATTGGTCCCAAAAAA
CAAGCATCGTCTCTACACCGACCGTGGTAAAAAAGGCTTCGGATGCCAGC
GCTCGGGAAATGACGTCATTTTTTATCCGTACGGTAATGAAAAGGCAAGC
TATCTCACAGTTGATCGTGTGGATCCATTTTGTTTGGAGCGTACCCATTG
TATTTAAGTGTTGAACCGTAAGCTTCTTTGGTCACGTCTTCCATCCAGTG
AACCCAACCTTAATTAACGTACAATATTATTATTTTTAACAAGACCCCCG
ACCTGCGTGCGGTCACGCTGACTCGAGGCGACCAAGCGGCCTCAACTCTC
CCTTTGTCATCGCTTTCTCAAGGCGGGTCACTTGGTATGATGACACTATG
GCAAACGTAGTGTTCATATTCCAGCACAAAATAAAGCGACTATTTTTAGT
CAGCCCAAGGGGTGCAACAGTTTTAACGGACATTAGTTGTCCCCCCTTTG
GATAAATGGATGAATGAATGAATGAATGTCCTCATGATCAGGTCGGGCAA
GATCGTTCTATCGGCGGAGCCGAACAACCTCATGAACAAGAATTCTTTCA
AGTACTCTGGTCTTGCCAACTCCAAGGCCGTCGGTATCCAGTTCGATGAA
GACGTCAAGGGTCGCCCGTGCGCGGCCATATGCTTAAAGGTACGACAAGC
TCTATTGGGAAGGGGAGGGGGTCACCATCTAACGTCGAATCGTTTCGTTT
TACTACGATGTTTCATTGTAGCCCTCGAGGGGGTAGCCTTTTTGTGTTAA
ATTGGAAGCAAGGCTTCTTTGGCGTAGAAAAAACGACTCGGAACAGTTAG
TTTTCGGCCGCCACGGTGTTTTTTATGTCTTATACTCAGCTATCCGCGAC
GTTTTTTCGTTTTTTCGTTTTCTGAACAGTCTTCGAAAAACACGAAGAAG
CCCAACAAGTCCGTCGGAAAGTCCCTGCTCAAGAAGACTTTCCCGAGTGT
CTCCCAGGCCATCAAAAAGCAGGTGGGTTTTGTTGCCTGCAGGATATTTT
ATTCGCGTTTCCCCTGCTATCGCCTATCGCAGCACACGCTCGTTCGTCTG
TCCCCTGGAGGTGCTGACCTCACTTGATAACGTGTTTCCGTGGCACTTTT
TTTGTTACCCTTTGTCAGACTGGTGGTTCCTACTACCGACCCGACCTGCA
GCGCGCGGCCCTCGTCCGCTGGTCTAAGGTGGGGTCCGTATGGAAATTGA
TATGGTGTATTTCTCGGTGGATCCGGGCACTCGACTGGTCGACTCGTTTA
TAGTACGCAAAGGAAATAACGGAGCCTTTATGGAGAAGATATGGCCCTTC
CCCTCTGTTTAGCGCCATTTCGCACGGGACGTTCCAGCTTGTTTGATTTT
GTAAAGAGAACAATTATCCTCTAAAGCTTGGACTCCAGAAAGGACCTTAC
ACGTTCCTAATATACAATCCGAAATTAACTTAGATATAACATGTATAATA
CAACCATGTGATTAATAACAGCCACTGTTCACTCTCTGGCTTTACGGCCA
TGATGGATAATGTAACACCTACAAGCTGAAATCAATCGATACCTATGTTC
ACCCTCTAGACCCTGGTTTTGTGTCCCCATACGATGAATAATGCAACATC
TACAACATGAAACCATTTGAGATGTATTTACAATGTAACCATATGTCGAA
TATAACTAACCCTTACTAACCACCATAGTTCACTCACAGGCTCTGGTTTG
ACGTCATAGCTGTCATAGTCCCCATATGGTTTATAATGTAAGTGTATGGA
ACAATGACAGGATCCCCGATGAACACCGGGGAACACGAATATTGACTTGT
ATTATCATTTTGTCCTTAAATGTAGTAGGTTTGATTAATCACGTGTGACG
ATTTTTTGCTCAAAGGTAGTAATGTACACATTCGAGCCTGACGATAGTTG
GTCCCCTGGACTGCATCATCTCTCATGGTGCTAAGAAGGCGTGGATGTTC
GAAAGGTTCTAATGAGTTCAACTTTTTTTTTAAATAAAAACCTGACGATA
GTCCCTCGACTACACTTCTCATTGTTCTAAGAAGGTGTGGATGTTTGGGG
GTTCTGACAACATGTGCCCTCTGCTTAGCGCTCGCACGGGCGTTCCAGTT
TGTTTGTTTTTTGTAAAGAACAGAAGGATGACAACAGATAACTAGCTAGC
CTCTGCTCACTCTCCGACAGCTCCAGATCAACACCGCATCCGTAACGCCA
GTAAATGTGTTGAGAGGCTATTGGCTGTTTTTTGCTTTGAGTTGTGGCCG
TTGTGTACATGGTAGAAATGTACACTGGATACGCTTCTTTTCGTGTCCTG
AACATAGAAAAAAAAAGTAGTCGAATCCACATTTTTGCACCACCTCTCTC
TGTACCGAGGCAAACAGAGAAGTTGCATATTTATGATGATACAGGAAGAG
GGAAAAAAAACAGTAGTAAAAAGGATACATAATTAGAGCACGTGGTTTTC
GAATGGAATTCGAATGTTTACTTTAGTAAGCATATTTATTTTCGTTTTTA
GAGAAGATTATTTTTCTTTTAAAACATACGAACTCATTCTAACCCCTCGA
ACATCCACACCTTCTTCACAACGTGCGAGGTGTAATCCAGGGGACCAACT
ATCGTCAGGTTCGATCGTGGAGATTACTATCGCTAATATAGTAGTAGCAT
TAACATCATTATTGTTACCATTGTTTATGCTTATCCCTATTGTTCCTGCT
CATTCTTGCTTTCTGATAGTTGGTTCCCTGGATTGCATTACGATGACAAG
AAGGTGTGGATGTTCGGAGAGTTA
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Coding sequence (CDS) from alignment at H-elongata_contig52054:2..4025+

>mRNA_H-elongata_contig52054.12491.1 ID=mRNA_H-elongata_contig52054.12491.1|Name=mRNA_H-elongata_contig52054.12491.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig52054:2..4025+ (Himanthalia elongata Himel1 dioecious)
ATGACGTCATTTTTTATCCGTACGGTAATGAAAAGATGACGTCATTTTTT
ATCCGTACGGTAATGAAAAGGTCGGGCAAGATCGTTCTATCGGCGGAGCC
GAACAACCTCATGAACAAGAATTCTTTCAAGTACTCTGGTCTTGCCAACT
CCAAGGCCGTCGGTATCCAGTTCGATGAAGACGTCAAGGGTCGCCCGTGC
GCGGCCATATGCTTAAAGGTCGGGCAAGATCGTTCTATCGGCGGAGCCGA
ACAACCTCATGAACAAGAATTCTTTCAAGTACTCTGGTCTTGCCAACTCC
AAGGCCGTCGGTATCCAGTTCGATGAAGACGTCAAGGGTCGCCCGTGCGC
GGCCATATGCTTAAAGTCTTCGAAAAACACGAAGAAGCCCAACAAGTCCG
TCGGAAAGTCCCTGCTCAAGAAGACTTTCCCGAGTGTCTCCCAGGCCATC
AAAAAGCAGGTGGGTTTTGTTGCCTGCAGGATATTTTATTCGCGTTTCCC
CTGCTATCGCCTATCGCAGCACACGCTCGTTCGTCTGTCCCCTGGAGGTG
CTGACCTCACTTGATCTTCGAAAAACACGAAGAAGCCCAACAAGTCCGTC
GGAAAGTCCCTGCTCAAGAAGACTTTCCCGAGTGTCTCCCAGGCCATCAA
AAAGCAGGTGGGTTTTGTTGCCTGCAGGATATTTTATTCGCGTTTCCCCT
GCTATCGCCTATCGCAGCACACGCTCGTTCGTCTGTCCCCTGGAGGTGCT
GACCTCACTTGA
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