mRNA_H-elongata_contig51907.12473.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A836CF07_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF07_9STRA) HSP 1 Score: 135 bits (340), Expect = 4.820e-35 Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSV-----MERLRRLRAGISHNDSAERF-TKLGVDVYIGRGEFTSRNTVMV 279
+VA+IESHLMGGDCLNVGCVPSKALI AA VAHTV N + YG+ + G V V MER+RRLRAGISH+DSAERF T+LG+DV+IGRG FT NT+ V
Sbjct: 195 KVAIIESHLMGGDCLNVGCVPSKALIKAATVAHTVNNCQEYGISIEGTVKVDFGKVMERMRRLRAGISHHDSAERFATELGIDVFIGRGTFTGPNTIAV 293
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A7S2UV08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV08_9STRA) HSP 1 Score: 126 bits (316), Expect = 7.300e-34 Identity = 64/99 (64.65%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSV-----MERLRRLRAGISHNDSAERFTK-LGVDVYIGRGEFTSRNTVMV 279
+VA++E+HL+GGDCLNVGCVPSKALI A VAH V+ + YGV VTG V V MER+R+LRAGISH+DSAER++K LG+DV++G G+FTS NTV V
Sbjct: 5 KVAIVENHLLGGDCLNVGCVPSKALIKCAEVAHQVKTAAEYGVNVTGTVEVDFGKVMERMRKLRAGISHHDSAERYSKQLGIDVFMGWGKFTSPNTVEV 103
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A3B1DKA9_9ZZZZ (Mercuric ion reductase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DKA9_9ZZZZ) HSP 1 Score: 123 bits (308), Expect = 1.020e-33 Identity = 62/98 (63.27%), Postives = 80/98 (81.63%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSV-----MERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTVMV 279
+VALIE +LMGGDCLNVGCVPSKALISAAR T+R+S+A+G+E+ G+V+V MER+R+LR+GIS +DSA+RF +LGVDV+IG G F TV+V
Sbjct: 59 KVALIERNLMGGDCLNVGCVPSKALISAARKFATIRDSDAFGIEIDGNVNVNFPAVMERMRKLRSGISRHDSAKRFQELGVDVFIGDGRFEDNRTVVV 156
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A7S3ZB25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZB25_9EUKA) HSP 1 Score: 126 bits (317), Expect = 7.870e-32 Identity = 61/98 (62.24%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHV-----SVMERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTVMV 279
+VALIE++L+GGDCLNVGCVPSKA++ +A++AH ++ ++ YG+ ++G +VMERLRRLRAGI+H+DSAERFT LGVDV++G G+FTSRNTV V
Sbjct: 224 KVALIEANLLGGDCLNVGCVPSKAILKSAKIAHQIKKAKEYGI-LSGDAKVDFGAVMERLRRLRAGIAHHDSAERFTSLGVDVFLGHGKFTSRNTVEV 320
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A0G4FLL1_VITBC (DEP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLL1_VITBC) HSP 1 Score: 126 bits (316), Expect = 1.050e-31 Identity = 69/101 (68.32%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNS--EAYGVEVTGHV-----SVMERLRRLRAGISHNDSAERFTK-LGVDVYIGRGEFTSRNTVMV 279
+VALIE HLMGGDCLNVGCVPSKALI AA VAH R + + YGV + G V VM+R+RRLRA ISH+DSAERFTK LGVDVYIG+G FTS NT+ V
Sbjct: 214 KVALIEDHLMGGDCLNVGCVPSKALIKAATVAHHAREAYTKEYGVHIDGSVRVDLGEVMQRMRRLRASISHHDSAERFTKDLGVDVYIGKGVFTSPNTITV 314
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A5B1CI47_9BACT (Mercuric reductase n=1 Tax=Rubripirellula obstinata TaxID=406547 RepID=A0A5B1CI47_9BACT) HSP 1 Score: 125 bits (313), Expect = 1.190e-31 Identity = 65/97 (67.01%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHV----SVMERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTVMV 279
+VALIE +LMGGDCLNVGCVPSKA+ISAARVA +V+N + +GV V G VMER+R LRAGISH+DSA+RF +LGVDV+IG G FTS TV V
Sbjct: 65 KVALIERNLMGGDCLNVGCVPSKAIISAARVAASVKNGDTFGVNVDGFQVDFGKVMERMRSLRAGISHHDSAKRFQELGVDVFIGSGNFTSSGTVEV 161
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A3E0Q0P1_9BACT (Mercuric reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q0P1_9BACT) HSP 1 Score: 124 bits (312), Expect = 1.590e-31 Identity = 66/98 (67.35%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSV-----MERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTVMV 279
+VALIE HLMGGDCLNVGCVPSK L+SAAR A VRN+ +GV V G V V MER+RRLRAGISH+DSA RF LGVDVY+G G FT TV V
Sbjct: 62 RVALIEKHLMGGDCLNVGCVPSKGLLSAARAAAAVRNAANFGVTVDGDVRVDFPAAMERMRRLRAGISHHDSAARFRDLGVDVYLGEGRFTDGATVEV 159
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A532C3Q2_9BACT (FAD-binding protein (Fragment) n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532C3Q2_9BACT) HSP 1 Score: 119 bits (297), Expect = 1.590e-31 Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHV-----SVMERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTVMV 279
+VALIE HLMGGDCLNVGCVPSK +I AAR +RN+E +G+ + V +VM R+R+LRA ISHNDSA R+TKLGVDVYIG G FT +T+ V
Sbjct: 61 KVALIEKHLMGGDCLNVGCVPSKGIIRAARAWADLRNAEEFGLHIPPGVKYDFGAVMARMRKLRAQISHNDSAHRYTKLGVDVYIGSGRFTGADTIQV 158
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A534ZG28_9DELT (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZG28_9DELT) HSP 1 Score: 122 bits (306), Expect = 2.070e-31 Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTG----HVSVMERLRRLRAGISHNDSAERFTKLGVDVYIGRGEFTSRNTV 273
+VAL+E HL+GGDCLNVGCVPSKA+I+AAR A T R + A+GV V+G +VMER+RRLRAGI+ +D AERFT+LGVDV++G G FT R T+
Sbjct: 125 RVALVERHLLGGDCLNVGCVPSKAMIAAARTAATARETSAFGVGVSGVDVDFAAVMERMRRLRAGIAPHDGAERFTRLGVDVFLGEGRFTGRATL 219
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Match: A0A388LFS9_CHABU (DEP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFS9_CHABU) HSP 1 Score: 125 bits (313), Expect = 3.140e-31 Identity = 69/99 (69.70%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 QVALIESHLMGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSV-----MERLRRLRAGISHNDSAERFTK-LGVDVYIGRGEFTSRNTVMV 279
+VAL+E +L+GGDCLNVGCVPSKALI +A+VA TVRN AYGV+V G VSV MERLRRLRA IS NDSA+RFT+ LGVDVY GRGEF S T+ V
Sbjct: 359 KVALVEMNLLGGDCLNVGCVPSKALIKSAKVAATVRNPTAYGVDVKGEVSVDFPKVMERLRRLRAEISVNDSAKRFTEDLGVDVYFGRGEFKSPTTLEV 457 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51907.12473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51907.12473.1 >prot_H-elongata_contig51907.12473.1 ID=prot_H-elongata_contig51907.12473.1|Name=mRNA_H-elongata_contig51907.12473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp MGGDCLNVGCVPSKALISAARVAHTVRNSEAYGVEVTGHVSVMERLRRLRback to top mRNA from alignment at H-elongata_contig51907:1543..2383+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51907.12473.1 ID=mRNA_H-elongata_contig51907.12473.1|Name=mRNA_H-elongata_contig51907.12473.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=841bp|location=Sequence derived from alignment at H-elongata_contig51907:1543..2383+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51907:1543..2383+ >mRNA_H-elongata_contig51907.12473.1 ID=mRNA_H-elongata_contig51907.12473.1|Name=mRNA_H-elongata_contig51907.12473.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=540bp|location=Sequence derived from alignment at H-elongata_contig51907:1543..2383+ (Himanthalia elongata Himel1 dioecious)back to top |