mRNA_H-elongata_contig519.12470.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig519.12470.1
Unique NamemRNA_H-elongata_contig519.12470.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: D7G5E0_ECTSI (Cilia- and flagella-associated protein 157 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E0_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 5.070e-122
Identity = 313/735 (42.59%), Postives = 388/735 (52.79%), Query Frame = 1
Query:    1 DFGNINLDLANLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLEQMKSIDTDMNEE------KLADLEEYLAERSFKSGTTYDARSDNWAG-LDNNSLTSDTSPGFQAGWTINSGAYRGLEYESVDELQDAVGSLKRLHEELQQEARRITARAKEKHIAGALLGRE-------YDPVVANLIEGAEKWILL------------------------------------------SKRAKENRG---DFKGGKNASNLACWEVWRGPNFVGEGRGKGSGCHSSNASWRGKTADGKETNRGFSRATKTKIWRGTMQERQYLAASPT----------ESGPLAKATTTPLLRRELFYHLVEEFRDFQSKSRPENEGSSGSN-GAYKNVDRESKDFADDPRIETPVASREGAHSVGESLVHDAQVEQSSVASCANARSDGASPSDLSSISVRTLCDFSAWGKRNASTQTVAKHFPEKFATVRPARRLVVTNTFLTSNST-----FSTSTVRSAGSGSLSTDG 1980
            + G+++LD A LDDM   L +LE + R LLE+I+ LR R+ADEK DQSDVYYYLHKKLDDNYDVISAL+RQL+VE+ADR+KAE+E+ RQI ELE R DEEL  LK                                          +DLN  RRKKLQEKQRV+ QVEE+I  LS ELFSKKE+ELADK  R  +NN KLH ALQAKAKQAE+++ +N+GL FEN S+RND+DL +ASE VL KRVR++H +VI LK +LEQ ++ D D  ++      +LA+LEE LA              D     LD  S TSDT    Q  W    GA   L YESVDEL+ AV SL+RLH EL++EA R+T R +E   +    G E        DPVV+ LIE AE+W+                                            S+R +  RG   D  G    +N     + R  N    G GK           RGKTAD   + +  + AT  +       +R+    SP+          + G LA AT TPL RRELFYHLV+ FR++Q +   ++ G    + G+ +    E       P   T  A   G    G     +A  E   V        D  S SD  S SVRTLCDF      + STQTVAKHFPEKFA+VRPARRLVV +TFLTS+ST      S STVRS G G+ S DG
Sbjct:   21 ELGDLDLDSAKLDDMVHALGRLELEKRGLLENIRVLRLRLADEKEDQSDVYYYLHKKLDDNYDVISALQRQLMVETADREKAEKEYTRQIEELEARRDEELGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLECEIETTQFTFENDLNTERRKKLQEKQRVRTQVEEEIMTLSSELFSKKEVELADKTVRAKDNNDKLHAALQAKAKQAEQMMVMNQGLIFENRSLRNDLDLAEASEEVLHKRVRLYHELVISLKARLEQ-EACDDDAEDDDVSDGQELAELEESLASXXXXXXXXXXXXDDTTVSCLDTLSSTSDTPSSAQVIWA--GGACGALAYESVDELRVAVESLQRLHTELREEASRLTVRIEEAVDSAPAAGTEGGRGRDTEDPVVSCLIEAAEEWMAAALASRPARPGEERDRIGGXXXXXXXXXXXXXXXXXXXXPASASRRERSVRGSPGDHSGATTPNNNITGAIDRRYNLR-SGSGK-----------RGKTADSSRSGKRGAVAT-ARGGSALANQRRKQTPSPSPCTTPSGGGRDGGALAAATKTPLRRRELFYHLVDAFREYQRRRTSQHVGDGAVDVGSDRLPGGEEWGQKGVPGTGTTAAEAGGPDGGGS----NASTEFPPVGVSFGDDGDLHSASDGLSASVRTLCDFGPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYGAASFDG 735          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A6H5KR66_9PHAE (Cilia- and flagella-associated protein 157 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR66_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.290e-102
Identity = 282/682 (41.35%), Postives = 358/682 (52.49%), Query Frame = 1
Query:  136 DQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLEQMKSIDTDMNEE------KLADLEEYLAERSFKSGTTYDARSDNWAG-LDNNSLTSDTSPGFQAGWTINSGAYRGLEYESVDELQDAVGSLKRLHEELQQEARRITARAKEKHIAGALLGRE-------YDPVVANLIEGAEKWILLSKRAKENR----GDFKGGKNASN-------LACWEVWRGPNFVGEGRGKGSGCHSSN----------------ASWRGKTADGKETNRGFSRATKTKIWRGTMQERQYLAASPTES--GPLA-------------KATTTPLLRRELFYHLVEEFRDFQSKSRPENEGSSGSNGAYKNVDRESKDFADD------PRIETPVASREGAHSVGESLVHDAQVEQSSVASCANARSDGASPSDLSSISVRTLCDFSAWGKRNASTQTVAKHFPEKFATVRPARRLVVTNTFLTSNST-----FSTSTVRSAGSGSLSTDG 1980
            DQSD+YYYLHKKLDDNYDVISAL+RQL++E+ADR+KAE+E+ RQI +LE R DE L  LK                                          +DLN  RRK+LQEKQRV+ QVEE+I  LS +LFSKKE+ELADK  R  +NN+ LH ALQAKAKQAER++ +N+GL FEN  +RND+DL +ASE VL KRVR++H++VI LK +LEQ ++ D D  ++      +LA+LEE LA              D     L+  S TS T    Q  W    GA   L YESVDEL+ AV SL+RLH EL++EA R+TAR +E   +    G E        DPVV+ L+E AE+W+  +  ++  R    GD  GG   +        L      R    V    G  SG  + N                +  RGKTAD     +  S AT      G+  E Q    SP+ S   PL+                  P  RRELFYHLV+ FR++Q +   ++ G    +GA   VD +     ++      P  +T  A   G    G     +A  E   V        D  SPSD  S SVRTLCDF      + STQTVAKHFPEKFA+VRPARRLVV +TFLTS+ST      S STVRS G  ++S+DG
Sbjct:    9 DQSDIYYYLHKKLDDNYDVISALQRQLMIETADREKAEKEYTRQIEQLEARRDEVLGPLKEKLMTEEEQLNGMHEAAKNKQEADAKRARLESEIETTQSTFENDLNTERRKQLQEKQRVRTQVEEEIMTLSSDLFSKKEVELADKTVRAKDNNENLHAALQAKAKQAERMMVMNQGLIFENRGLRNDLDLAEASEEVLHKRVRLYHDLVISLKARLEQ-EACDDDAEDDDVSDGQELAELEESLASXXXXXXXXXXXXDDTTVSCLETLSSTSGTPCSAQVIWA--GGACGALAYESVDELRVAVESLQRLHAELREEASRLTARIEETADSFPTAGTEGGRGRDTEDPVVSCLLEAAEEWMAAAMASRPARPGEEGDRIGGGGGNEREGPPVPLLPAPASRRERSVRGSPGDHSGATNPNNNNIGAIDRRYNLRSGSGNRGKTADSSRNGKRESVATARG---GSALENQRTKQSPSPSPCSPLSGXXXXXXXXXXXXXXXXXPRRRRELFYHLVDAFREYQRRKASQHIG----DGAV-GVDSDRLPGGEEWGQKGVPGTQTTTAEAGGPDGGGS----NASTEFPPVGVSFGDGGDLHSPSDGLSASVRTLCDFRPPDCHSVSTQTVAKHFPEKFASVRPARRLVVNSTFLTSHSTVTNSVLSASTVRSWGYDAVSSDG 675          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A485L6T9_9STRA (Cilia- and flagella-associated protein 157 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6T9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.580e-12
Identity = 64/261 (24.52%), Postives = 122/261 (46.74%), Query Frame = 1
Query:    7 GNINLDLA-NLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLE 786
            G I+  LA  L  M + ++ LE +N LL  +   L+ ++  ++ D++D+YYYLHKKLD NY+VI+ LE  +    A+RD  ++   +Q S  E    +E   L                                             ++ + R+ +QEK+R+K+ +  +I++    L ++ E +L    KR    N ++ + LQ ++K+ E+++   + L  E   +R  + L K +EA ++KR   +  ++  L  +++
Sbjct:   46 GKIDTVLAFELSVMNDFMKSLESENTLLKSENNALKAKLLQQREDEADIYYYLHKKLDANYEVIAQLEADIQTAKAERDAMDRTLRQQASAQEDAFAKEKKELTERIESAEDTLHALEVFRERKVALEDTIAAMETTLATEKESHVKQVHEMERRNVQEKERIKKDMLMKIKENKQNLLARTEDQLHTTTKRTMMENDQMISELQYQSKETEKLLVKYKALEGEVVHLRLQLKLNKETEAEMAKRTHFYQKLIKKLNERVQ 306          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A1V9Z7V1_9STRA (Cilia- and flagella-associated protein 157 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7V1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.260e-10
Identity = 61/255 (23.92%), Postives = 120/255 (47.06%), Query Frame = 1
Query:    7 GNINLDLA-NLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKA--EQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIV 762
            G I+  LA  L  M + ++ +EQ+N LL  +   L+ ++  ++ D++D+Y+YLHKKLD NY+VIS LE ++  ES  R+K   E+++   ++    +  +E                                                 L  + RK +QEK+R+K+++  +I++    L +  E +L    KR    N ++ + LQ ++K+ E+++   + +  E + +R  + L K +E  ++KR   +  ++
Sbjct:   22 GKIDTVLAFELSVMNDHMKTMEQENALLKAENNTLKAKLLQQREDEADIYFYLHKKLDGNYEVISQLENEI--ESVKREKTTMEEQYNSDLAAKTEQFSKEKKDWSERMESAESTLHALELFQERKTALENTLDQLESQLTREKDQHRQQLMDIERKNIQEKERIKKEMLVKIKENKQNLLAMTEDQLHTTTKRTMMENDQMISELQYQSKETEKLLAKYKAIEAEVTQLRLQLKLNKETEVEMAKRTHFYQKLI 274          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A7S3XVY9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVY9_HETAK)

HSP 1 Score: 70.1 bits (170), Expect = 8.810e-9
Identity = 32/73 (43.84%), Postives = 52/73 (71.23%), Query Frame = 1
Query:   97 IKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLK 315
            +K  ++ +  +K DQ+DVYYYLHKKLDDN+D+IS LERQ++ E  DR++ ++E+ R+I      + ++ T L+
Sbjct:   53 VKSQKEELVKQKNDQADVYYYLHKKLDDNFDLISELERQIISEQTDRERKKREYERKIEAKREELSKKTTGLE 125          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A7S3HK28_9STRA (Cilia- and flagella-associated protein 157 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK28_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.890e-9
Identity = 33/79 (41.77%), Postives = 60/79 (75.95%), Query Frame = 1
Query:   43 MREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISEL 279
            +RE++ +LE+    LL +IK+L++++A +K DQ+D+Y+YL+KK D+ ++VI++LE Q++ E  DR+ AE+ +  +I EL
Sbjct:   26 LREMINELEETKLSLLLNIKELKEKLAQQKDDQADIYFYLNKKCDEGFEVIASLEEQIINEQTDREIAEKLYENRIEEL 104          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: W4FVL0_9STRA (Cilia- and flagella-associated protein 157 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVL0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.290e-8
Identity = 58/261 (22.22%), Postives = 118/261 (45.21%), Query Frame = 1
Query:    7 GNINLDLA-NLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLE 786
            G I+  LA  L  M + ++ +E +N L+  +   L+ ++  +K D++D+YYYLHKKLD NY+VI+ LE  +     +RD  ++    +  E +    +E   L                                             +  + R+ +QEK+R+K+ +  +I++    L ++ E +L    KR    N ++ + LQ ++K+ E+++   + L  E   +R  + + K +E  ++KR   +  ++  L  +++
Sbjct:   36 GKIDTVLAFELSVMNDHMKAMEGENALIKAENDMLKAKLVQQKEDEADIYYYLHKKLDANYEVIAQLESDIQTVKLERDAMDKAFHIKQDETQDAFAKEKKELTERIESAEDTLHALEVFRERKIVLEDTIAAMESTLAAEKDNHKKQVVEMERRNVQEKERIKKDMLMKIKENKQNLLARTEDQLDTTTKRTMMENDQMISELQYQSKETEKLLVKYKALETEVVHLRLQLKVNKDTEVEMAKRTHFYQKLIKKLNERVQ 296          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: W4FUP4_9STRA (Cilia- and flagella-associated protein 157 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUP4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.380e-8
Identity = 58/261 (22.22%), Postives = 118/261 (45.21%), Query Frame = 1
Query:    7 GNINLDLA-NLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLE 786
            G I+  LA  L  M + ++ +E +N L+  +   L+ ++  +K D++D+YYYLHKKLD NY+VI+ LE  +     +RD  ++    +  E +    +E   L                                             +  + R+ +QEK+R+K+ +  +I++    L ++ E +L    KR    N ++ + LQ ++K+ E+++   + L  E   +R  + + K +E  ++KR   +  ++  L  +++
Sbjct:   36 GKIDTVLAFELSVMNDHMKAMEGENALIKAENDMLKAKLVQQKEDEADIYYYLHKKLDANYEVIAQLESDIQTVKLERDAMDKAFHIKQDETQDAFAKEKKELTERIESAEDTLHALEVFRERKIVLEDTIAAMESTLAAEKDNHKKQVVEMERRNVQEKERIKKDMLMKIKENKQNLLARTEDQLDTTTKRTMMENDQMISELQYQSKETEKLLVKYKALETEVVHLRLQLKVNKDTEVEMAKRTHFYQKLIKKLNERVQ 296          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A024U2D7_9STRA (Cilia- and flagella-associated protein 157 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2D7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.520e-8
Identity = 59/261 (22.61%), Postives = 117/261 (44.83%), Query Frame = 1
Query:    7 GNINLDLA-NLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEELTSLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLNVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKKLHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVFHNIVIDLKTKLE 786
            G I+  LA  L  M + ++ +E +N L+  +   L+ ++  ++ D++D+YYYLHKKLD NY+VI+ LE  +     +RD  +     +  E E    +E   L                                             L  + R+ +QEK+R+K+ +  +I++    L ++ E +L    KR    N ++ + LQ ++K+ E+++   + L  E   +R  + + K +E  ++KR   +  ++  L  +++
Sbjct:   41 GKIDTVLAFELSLMNDHMKTMEGENALIKAENDMLKAKLVQQREDEADIYYYLHKKLDANYEVIAQLESDIQTVKQERDAMDVAFRLKQHETEEAFAKEKRELTERVEGAEDTLHALEVFRERKIALEDKIAAMESTLVAEKENHRKQLVDMERRNVQEKERIKKDMLMKIKENKQNLLARTEDQLDTTTKRTMMENDQMISELQYQSKETEKLLAKYKALETEVVHLRLQLKVNKETEVEMAKRTHFYQKLIKKLNERVQ 301          
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Match: A0A482RXE3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXE3_9ARCH)

HSP 1 Score: 65.5 bits (158), Expect = 1.330e-7
Identity = 31/82 (37.80%), Postives = 60/82 (73.17%), Query Frame = 1
Query:   34 LDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDVYYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISEL 279
            ++ ++E ++ LE     L+  IK+L+D++A ++ DQ+D+YY+L+KK D+++++I+ LE QL+ E ADR+ +E+ +  +I EL
Sbjct:   12 IETLKETIKTLEDAKLNLVVTIKELKDKLAQQRDDQADIYYFLNKKCDESFEIIATLEEQLLNEQADREISEKLYESKIEEL 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig519.12470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G5E0_ECTSI5.070e-12242.59Cilia- and flagella-associated protein 157 n=1 Tax... [more]
A0A6H5KR66_9PHAE1.290e-10241.35Cilia- and flagella-associated protein 157 n=1 Tax... [more]
A0A485L6T9_9STRA4.580e-1224.52Cilia- and flagella-associated protein 157 n=1 Tax... [more]
A0A1V9Z7V1_9STRA1.260e-1023.92Cilia- and flagella-associated protein 157 n=1 Tax... [more]
A0A7S3XVY9_HETAK8.810e-943.84Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3HK28_9STRA8.890e-941.77Cilia- and flagella-associated protein 157 (Fragme... [more]
W4FVL0_9STRA3.290e-822.22Cilia- and flagella-associated protein 157 n=1 Tax... [more]
W4FUP4_9STRA4.380e-822.22Cilia- and flagella-associated protein 157 n=2 Tax... [more]
A0A024U2D7_9STRA4.520e-822.61Cilia- and flagella-associated protein 157 n=2 Tax... [more]
A0A482RXE3_9ARCH1.330e-737.80Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig519contigH-elongata_contig519:7407..11747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_008720.1
Exons7
Model size2004
Cds size2004
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930848.5096202-CDS-H-elongata_contig519:7406..75381622930848.5096202-CDS-H-elongata_contig519:7406..7538Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 7407..7538 +
1691679596.3605902-CDS-H-elongata_contig519:7406..75381691679596.3605902-CDS-H-elongata_contig519:7406..7538Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 7407..7538 +
1622930848.5319057-CDS-H-elongata_contig519:7914..81241622930848.5319057-CDS-H-elongata_contig519:7914..8124Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 7915..8124 +
1691679596.3716621-CDS-H-elongata_contig519:7914..81241691679596.3716621-CDS-H-elongata_contig519:7914..8124Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 7915..8124 +
1622930848.5447795-CDS-H-elongata_contig519:8688..88951622930848.5447795-CDS-H-elongata_contig519:8688..8895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 8689..8895 +
1691679596.3793607-CDS-H-elongata_contig519:8688..88951691679596.3793607-CDS-H-elongata_contig519:8688..8895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 8689..8895 +
1622930848.559956-CDS-H-elongata_contig519:9263..94341622930848.559956-CDS-H-elongata_contig519:9263..9434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 9264..9434 +
1691679596.3888173-CDS-H-elongata_contig519:9263..94341691679596.3888173-CDS-H-elongata_contig519:9263..9434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 9264..9434 +
1622930848.577145-CDS-H-elongata_contig519:9991..103121622930848.577145-CDS-H-elongata_contig519:9991..10312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 9992..10312 +
1691679596.397278-CDS-H-elongata_contig519:9991..103121691679596.397278-CDS-H-elongata_contig519:9991..10312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 9992..10312 +
1622930848.5923564-CDS-H-elongata_contig519:10483..112871622930848.5923564-CDS-H-elongata_contig519:10483..11287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 10484..11287 +
1691679596.4079945-CDS-H-elongata_contig519:10483..112871691679596.4079945-CDS-H-elongata_contig519:10483..11287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 10484..11287 +
1622930848.6037164-CDS-H-elongata_contig519:11588..117471622930848.6037164-CDS-H-elongata_contig519:11588..11747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 11589..11747 +
1691679596.4160683-CDS-H-elongata_contig519:11588..117471691679596.4160683-CDS-H-elongata_contig519:11588..11747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig519 11589..11747 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig519.12470.1prot_H-elongata_contig519.12470.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig519 7407..11747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig519.12470.1

>prot_H-elongata_contig519.12470.1 ID=prot_H-elongata_contig519.12470.1|Name=mRNA_H-elongata_contig519.12470.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=668bp
DFGNINLDLANLDDMREVLRKLEQDNRLLLEDIKDLRDRIADEKADQSDV
YYYLHKKLDDNYDVISALERQLVVESADRDKAEQEHGRQISELEHRIDEE
LTSLKENVIAMEEQVNSMHEAAGNKRDSEAKKEMLEKEIELTESVVESDL
NVVRRKKLQEKQRVKRQVEEQIQQLSIELFSKKELELADKAKRVAENNKK
LHTALQAKAKQAERIVTVNRGLAFENSSIRNDVDLTKASEAVLSKRVRVF
HNIVIDLKTKLEQMKSIDTDMNEEKLADLEEYLAERSFKSGTTYDARSDN
WAGLDNNSLTSDTSPGFQAGWTINSGAYRGLEYESVDELQDAVGSLKRLH
EELQQEARRITARAKEKHIAGALLGREYDPVVANLIEGAEKWILLSKRAK
ENRGDFKGGKNASNLACWEVWRGPNFVGEGRGKGSGCHSSNASWRGKTAD
GKETNRGFSRATKTKIWRGTMQERQYLAASPTESGPLAKATTTPLLRREL
FYHLVEEFRDFQSKSRPENEGSSGSNGAYKNVDRESKDFADDPRIETPVA
SREGAHSVGESLVHDAQVEQSSVASCANARSDGASPSDLSSISVRTLCDF
SAWGKRNASTQTVAKHFPEKFATVRPARRLVVTNTFLTSNSTFSTSTVRS
AGSGSLSTDGNMKAVFS*
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mRNA from alignment at H-elongata_contig519:7407..11747+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig519.12470.1 ID=mRNA_H-elongata_contig519.12470.1|Name=mRNA_H-elongata_contig519.12470.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4341bp|location=Sequence derived from alignment at H-elongata_contig519:7407..11747+ (Himanthalia elongata Himel1 dioecious)
GACTTCGGCAACATAAATTTGGACTTGGCCAACCTCGATGACATGCGTGA GGTATTGAGAAAGCTCGAGCAAGATAACCGTTTACTTCTCGAGGATATCA AAGATCTCCGTGATCGGATTGCAGACGAAAAGGTTTGAAACAAGCACCAA ATGTCCTCGAAGATTGCCTAGAGAGAGGCATGTTAGGCTCCAATGTTATT TCTACCCAATACTTTCGAATGGGATATAACATAGAAGCATACAAAGATTT GGACCTTCAGTTAGCTATGTGCGCAAGGGTGGTTTGTTAGTTTTCTGTGT GGAAACGCATCGCTGCAATCATCGTAGCTCGCATTGCCGTCCAAGCTGGA TTCTGCATCAGACATGACGTGTCGTGGGAGGCTGATGCATCCTAGTAAAG TTTGATACGGCATCCTCGGCACGAACTCGAGCTTTTTAATGTAAGCTCAA TCGCCAACGTTTCACTGACTCAGGTGATCTCGATCGTTTGTACCCTCTAC ATAAACAGGCAGATCAAAGCGACGTCTACTACTATCTCCACAAGAAGCTT GATGACAACTATGACGTCATTAGTGCCCTCGAGCGACAGCTTGTGGTAGA ATCCGCCGACCGCGACAAGGCCGAGCAAGAGCATGGTCGACAGATCAGCG AGTTAGAGCATCGTATTGACGAGGAGCTGACATCGTTGAAGGAGAATGTC ATCGCGATGGAGGAGCAGGTGTGTGTAAGGACGATATGATCTCGAATATC GTACATCTCAAGCGCAAGCGCTGAATGTATCGCACACGATTTTCTGCCTC AGCTGAAGGTAGGCCGTGTAACCCCGCATTTATGACCGAGGAGAGGCAGG TCAGCACGTAGATGTTCGCAAACTTATTAGAGGTGCGGATATTAGCTCGT TACGTTCCTGTGTGGAAGAAGTGATATATGAAGCGGAAGGAATGTAAGAG TTTTCAGATCACTTGCCCCCCGAATTTTGCACACAGGCACAATATTTCAG GCCGCATAGTACCCGCGCTATTTGGCATCATCGCTCTATAAAGTTTATCA CATTCGCCTCACGAAAAAAAAAGAGGCCATGTTCGATGAAATCGACCGGC AAGCTTATCATCTAGTTTCTCTTTCCATGCGCAAGCACAAATAACTGCGT CGCAAGACCGTCGAGAAAAATAGTATCCCACATCCGTCATCAGTAGCCAC GTATGCGGCATGGCACTTATGAAGAGACGATTGAGTGAGGGTCCCGTCTC GTATATCGTGCCGCCGTGTTCCATGAGCTCAGGTCAACAGCATGCACGAG GCTGCGGGGAACAAGAGGGATTCTGAAGCTAAGAAAGAAATGTTGGAAAA AGAGATCGAGTTGACCGAGTCTGTCGTCGAGTCCGATCTGAACGTCGTGC GGCGAAAAAAATTGCAGGAGAAGCAGCGAGTGAAGCGGCAAGTCGAAGAG CAGATCCAGCAGCTCAGCATCGAGCTCTTCTCTAAGAAGGTTTCCGTCCA GATATCCGATACCACAAGAAGGCAACACTGGCACACATAAGATAAAGCTG GCTCTTAAGGTTGATGCATTTCTCAAGGGGGGATTTAATGCGATGAATCC TGGTGGTAAATGTCGCCATATCGTCGATACGATTTGCACAACATCTTTCA GCGCCAATGTTTCCGCCAGAGTTGGCGTGGAATATTATTTCGATCAAGAT ACAATTTGCTTCGGTCGGCTCACGGAGATGTTTCTATCAGATAACACCTA ATTATCCCAGCCATCGACAGAACAAATAGTAAAGTTAACTGCAGTCCGAG CTCAGAACTACAAAGCCCCTACGCCTCGCAAACAAATGTCCCAACGCGCC TTATCAGGAACTCGAGCTCGCTGACAAAGCCAAGCGGGTGGCTGAGAACA ATAAGAAGCTTCACACGGCCCTCCAGGCGAAGGCCAAGCAAGCGGAAAGG ATTGTGACGGTCAACCGTGGTTTGGCTTTCGAGAACAGCAGTATTAGAAA CGACGTCGATCTCACGAAGGCATCAGAGGTGCGCCGAAAAGGTACAGTAA CGCAAGACCATCCCGCGTCAAGGCCACCGCAATCATAGATCTTGGGGATG TCGGCGATTGCGCTACACTCTATGATTTTGGCAATATTTCAGCTCACTCT CGGGGTAAGATACCCCGCGGCGAAAGGTCGGTCAAGCGCATGATCTTGAC GGTATCTTGCTATTACCATGATTGGTCCCATCAATGTAGAGATCTGCGCA AAGGTGATAGTTCATGTCTGCAACGGAGGCTAATGATCGACACTGACAAG CGCCATGATACGAGGCGACCATAATAACAGTCCCTGTTCGCTCAAGCTAT AGTGATTACCCATCCTCCGCCTCAGCGAATGACCTGGGTGATTCTGAATT ATTTGAGGCACAAAATTGACTGAACGCTTACATATTAGTGCTCCGCTACG CTGTGAGGCTTATTGCTAGTGGTGTCAAATATTTGCGTCAAGTCACACCC CTACTCTTTTACCCTTCATAATTCGTGTATACTACGCAATCTTCTGACTA AATCATCCTTGCGATCATCTGCTCGTTTCCACAAGGCTGTCTTGAGCAAG CGCGTCCGTGTGTTCCACAACATCGTGATTGACCTCAAGACCAAACTTGA GCAAATGAAATCCATTGACACTGATATGAACGAGGAGAAGCTGGCGGACC TTGAAGAGTATCTAGCCGAACGAAGCTTCAAGAGTGGTACTACGTACGAT GCAAGGAGCGATAATTGGGCAGGGCTAGACAACAATTCCCTGACCTCAGA CACTAGCCCAGGCTTTCAAGCTGGTTGGACTATAAATAGCGGGGCGTATA GGGGCTTGGAGTACGAGTCCGTCGACGAGCTTCAAGACGCCGTTGGCAGC CTGAAGGTGATGTATAACCATGTTTTACGATGATATATAAATATATTCAA GCCAAGAAACGCATTCCCAAAAAAATACGGCCTAGATGCCTGAGAGGTCG TAGATTCGCTCAGGAGGGTTCCACTGAGATTTCCCATGCTTTCCGTGCCG TTGACCTTGCACACACGTTCTATCCAGCGCCTGCACGAAGAGCTGCAACA GGAAGCACGGAGGATTACCGCGCGCGCCAAGGAAAAGCATATCGCGGGAG CTCTACTAGGGAGAGAGTATGATCCTGTAGTCGCTAACCTCATCGAGGGC GCCGAGAAGTGGATTTTGCTATCGAAACGGGCTAAAGAGAATCGTGGTGA TTTCAAAGGTGGAAAAAATGCGTCAAATCTGGCTTGTTGGGAAGTTTGGC GGGGACCGAACTTTGTGGGTGAAGGTCGCGGAAAAGGCAGCGGCTGTCAC AGTTCAAACGCCAGCTGGCGAGGAAAGACAGCCGATGGCAAGGAAACTAA TCGAGGCTTTAGTAGGGCTACAAAAACGAAGATATGGCGAGGGACGATGC AAGAGCGGCAATATTTAGCTGCGTCTCCCACCGAGTCGGGACCTCTAGCC AAGGCAACGACGACTCCTCTCCTTCGTCGAGAACTATTCTACCATCTCGT GGAAGAGTTCCGAGATTTCCAGTCGAAGTCGCGGCCAGAAAACGAGGGTT CTTCTGGCAGCAATGGTGCTTATAAAAATGTTGATCGAGAGTCGAAGGAC TTCGCGGATGACCCCCGAATCGAGACGCCGGTGGCAAGCAGGGAGGGAGC GCACAGTGTTGGCGAATCGTTGGTTCATGATGCACAGGTCGAACAAAGCT CCGTGGCTAGTTGTGCGAATGCGAGGAGTGACGGAGCATCACCAAGCGAC CTTTCTTCAATTTCTGTCCGTACTTTATGCGACTTTAGCGCCTGGGGAAA ACGCAATGCCTCGACGCAGACAGTTGCCAAGGTGGGTGTATAGATGATGT TATGGACGCCACACATATAGGCGTACGAAACCAAAAACGATGGAAATCTG AGTTAGAGCGTATATATATTTTCCCTTGGCTATAATTTATGTTTGCTTGT TTTCCCGATGAAAGTATGCCCCGCGTGGCCAAAACCAGATTCCGATGTTC TCCTTGAAGACTCGATTTATCTTCTGTCAGCTTATCATTTTTAGTGTACC TGACCACCGTTTCCTTTGGCTGCCCTTTCTTTTTGACACCGCACACACCC CGTCTTTGGATATCGACATGCTCCCGATGTAGCACTTCCCCGAGAAGTTC GCGACTGTGAGACCGGCACGGAGGTTAGTGGTCACGAACACCTTTTTGAC GTCCAACAGCACATTTTCTACGAGCACGGTGCGGAGCGCGGGGTCAGGGT CCCTATCCACCGACGGTAATATGAAGGCCGTATTTTCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig519:7407..11747+

>mRNA_H-elongata_contig519.12470.1 ID=mRNA_H-elongata_contig519.12470.1|Name=mRNA_H-elongata_contig519.12470.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4008bp|location=Sequence derived from alignment at H-elongata_contig519:7407..11747+ (Himanthalia elongata Himel1 dioecious)
GACTTCGGCAACATAAATTTGGACTTGGCCAACCTCGATGACATGCGTGA
GGTATTGAGAAAGCTCGAGCAAGATAACCGTTTACTTCTCGAGGATATCA
AAGATCTCCGTGATCGGATTGCAGACGAAAAGGACTTCGGCAACATAAAT
TTGGACTTGGCCAACCTCGATGACATGCGTGAGGTATTGAGAAAGCTCGA
GCAAGATAACCGTTTACTTCTCGAGGATATCAAAGATCTCCGTGATCGGA
TTGCAGACGAAAAGGCAGATCAAAGCGACGTCTACTACTATCTCCACAAG
AAGCTTGATGACAACTATGACGTCATTAGTGCCCTCGAGCGACAGCTTGT
GGTAGAATCCGCCGACCGCGACAAGGCCGAGCAAGAGCATGGTCGACAGA
TCAGCGAGTTAGAGCATCGTATTGACGAGGAGCTGACATCGTTGAAGGAG
AATGTCATCGCGATGGAGGAGCAGGCAGATCAAAGCGACGTCTACTACTA
TCTCCACAAGAAGCTTGATGACAACTATGACGTCATTAGTGCCCTCGAGC
GACAGCTTGTGGTAGAATCCGCCGACCGCGACAAGGCCGAGCAAGAGCAT
GGTCGACAGATCAGCGAGTTAGAGCATCGTATTGACGAGGAGCTGACATC
GTTGAAGGAGAATGTCATCGCGATGGAGGAGCAGGTCAACAGCATGCACG
AGGCTGCGGGGAACAAGAGGGATTCTGAAGCTAAGAAAGAAATGTTGGAA
AAAGAGATCGAGTTGACCGAGTCTGTCGTCGAGTCCGATCTGAACGTCGT
GCGGCGAAAAAAATTGCAGGAGAAGCAGCGAGTGAAGCGGCAAGTCGAAG
AGCAGATCCAGCAGCTCAGCATCGAGCTCTTCTCTAAGAAGGTCAACAGC
ATGCACGAGGCTGCGGGGAACAAGAGGGATTCTGAAGCTAAGAAAGAAAT
GTTGGAAAAAGAGATCGAGTTGACCGAGTCTGTCGTCGAGTCCGATCTGA
ACGTCGTGCGGCGAAAAAAATTGCAGGAGAAGCAGCGAGTGAAGCGGCAA
GTCGAAGAGCAGATCCAGCAGCTCAGCATCGAGCTCTTCTCTAAGAAGGA
ACTCGAGCTCGCTGACAAAGCCAAGCGGGTGGCTGAGAACAATAAGAAGC
TTCACACGGCCCTCCAGGCGAAGGCCAAGCAAGCGGAAAGGATTGTGACG
GTCAACCGTGGTTTGGCTTTCGAGAACAGCAGTATTAGAAACGACGTCGA
TCTCACGAAGGCATCAGAGGAACTCGAGCTCGCTGACAAAGCCAAGCGGG
TGGCTGAGAACAATAAGAAGCTTCACACGGCCCTCCAGGCGAAGGCCAAG
CAAGCGGAAAGGATTGTGACGGTCAACCGTGGTTTGGCTTTCGAGAACAG
CAGTATTAGAAACGACGTCGATCTCACGAAGGCATCAGAGGCTGTCTTGA
GCAAGCGCGTCCGTGTGTTCCACAACATCGTGATTGACCTCAAGACCAAA
CTTGAGCAAATGAAATCCATTGACACTGATATGAACGAGGAGAAGCTGGC
GGACCTTGAAGAGTATCTAGCCGAACGAAGCTTCAAGAGTGGTACTACGT
ACGATGCAAGGAGCGATAATTGGGCAGGGCTAGACAACAATTCCCTGACC
TCAGACACTAGCCCAGGCTTTCAAGCTGGTTGGACTATAAATAGCGGGGC
GTATAGGGGCTTGGAGTACGAGTCCGTCGACGAGCTTCAAGACGCCGTTG
GCAGCCTGAAGGCTGTCTTGAGCAAGCGCGTCCGTGTGTTCCACAACATC
GTGATTGACCTCAAGACCAAACTTGAGCAAATGAAATCCATTGACACTGA
TATGAACGAGGAGAAGCTGGCGGACCTTGAAGAGTATCTAGCCGAACGAA
GCTTCAAGAGTGGTACTACGTACGATGCAAGGAGCGATAATTGGGCAGGG
CTAGACAACAATTCCCTGACCTCAGACACTAGCCCAGGCTTTCAAGCTGG
TTGGACTATAAATAGCGGGGCGTATAGGGGCTTGGAGTACGAGTCCGTCG
ACGAGCTTCAAGACGCCGTTGGCAGCCTGAAGCGCCTGCACGAAGAGCTG
CAACAGGAAGCACGGAGGATTACCGCGCGCGCCAAGGAAAAGCATATCGC
GGGAGCTCTACTAGGGAGAGAGTATGATCCTGTAGTCGCTAACCTCATCG
AGGGCGCCGAGAAGTGGATTTTGCTATCGAAACGGGCTAAAGAGAATCGT
GGTGATTTCAAAGGTGGAAAAAATGCGTCAAATCTGGCTTGTTGGGAAGT
TTGGCGGGGACCGAACTTTGTGGGTGAAGGTCGCGGAAAAGGCAGCGGCT
GTCACAGTTCAAACGCCAGCTGGCGAGGAAAGACAGCCGATGGCAAGGAA
ACTAATCGAGGCTTTAGTAGGGCTACAAAAACGAAGATATGGCGAGGGAC
GATGCAAGAGCGGCAATATTTAGCTGCGTCTCCCACCGAGTCGGGACCTC
TAGCCAAGGCAACGACGACTCCTCTCCTTCGTCGAGAACTATTCTACCAT
CTCGTGGAAGAGTTCCGAGATTTCCAGTCGAAGTCGCGGCCAGAAAACGA
GGGTTCTTCTGGCAGCAATGGTGCTTATAAAAATGTTGATCGAGAGTCGA
AGGACTTCGCGGATGACCCCCGAATCGAGACGCCGGTGGCAAGCAGGGAG
GGAGCGCACAGTGTTGGCGAATCGTTGGTTCATGATGCACAGGTCGAACA
AAGCTCCGTGGCTAGTTGTGCGAATGCGAGGAGTGACGGAGCATCACCAA
GCGACCTTTCTTCAATTTCTGTCCGTACTTTATGCGACTTTAGCGCCTGG
GGAAAACGCAATGCCTCGACGCAGACAGTTGCCAAGCGCCTGCACGAAGA
GCTGCAACAGGAAGCACGGAGGATTACCGCGCGCGCCAAGGAAAAGCATA
TCGCGGGAGCTCTACTAGGGAGAGAGTATGATCCTGTAGTCGCTAACCTC
ATCGAGGGCGCCGAGAAGTGGATTTTGCTATCGAAACGGGCTAAAGAGAA
TCGTGGTGATTTCAAAGGTGGAAAAAATGCGTCAAATCTGGCTTGTTGGG
AAGTTTGGCGGGGACCGAACTTTGTGGGTGAAGGTCGCGGAAAAGGCAGC
GGCTGTCACAGTTCAAACGCCAGCTGGCGAGGAAAGACAGCCGATGGCAA
GGAAACTAATCGAGGCTTTAGTAGGGCTACAAAAACGAAGATATGGCGAG
GGACGATGCAAGAGCGGCAATATTTAGCTGCGTCTCCCACCGAGTCGGGA
CCTCTAGCCAAGGCAACGACGACTCCTCTCCTTCGTCGAGAACTATTCTA
CCATCTCGTGGAAGAGTTCCGAGATTTCCAGTCGAAGTCGCGGCCAGAAA
ACGAGGGTTCTTCTGGCAGCAATGGTGCTTATAAAAATGTTGATCGAGAG
TCGAAGGACTTCGCGGATGACCCCCGAATCGAGACGCCGGTGGCAAGCAG
GGAGGGAGCGCACAGTGTTGGCGAATCGTTGGTTCATGATGCACAGGTCG
AACAAAGCTCCGTGGCTAGTTGTGCGAATGCGAGGAGTGACGGAGCATCA
CCAAGCGACCTTTCTTCAATTTCTGTCCGTACTTTATGCGACTTTAGCGC
CTGGGGAAAACGCAATGCCTCGACGCAGACAGTTGCCAAGCACTTCCCCG
AGAAGTTCGCGACTGTGAGACCGGCACGGAGGTTAGTGGTCACGAACACC
TTTTTGACGTCCAACAGCACATTTTCTACGAGCACGGTGCGGAGCGCGGG
GTCAGGGTCCCTATCCACCGACGGTAATATGAAGGCCGTATTTTCTTGAC
ACTTCCCCGAGAAGTTCGCGACTGTGAGACCGGCACGGAGGTTAGTGGTC
ACGAACACCTTTTTGACGTCCAACAGCACATTTTCTACGAGCACGGTGCG
GAGCGCGGGGTCAGGGTCCCTATCCACCGACGGTAATATGAAGGCCGTAT
TTTCTTGA
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