mRNA_H-elongata_contig5169.12445.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5169.12445.1
Unique NamemRNA_H-elongata_contig5169.12445.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 8.950e-139
Identity = 215/328 (65.55%), Postives = 242/328 (73.78%), Query Frame = 3
Query:  234 EDARISTGGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVERLEYDSDLECLGVSGGGEKEGE 1217
            +DARISTGGKEKE F L LA MADG KV  R IFKGTPF PP   GKGK T PRK S+A E+ P NR K GHPA GMSFGVQE SW D REC  WIS S +L PNNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT VI IPG LTPLLQPLDRMLNKQMKRLLR KYTAY+A+AV+D  +GKLKP  RG+VSTWCKE W + TP+ V+TCF I GLTLALDGSEDHA C HNFGE YR+LL++QR      H  V+LPP +LP+VP G    +NPITAA+K V+G+LLP     ESDS+VE LE           GGG  EGE
Sbjct:  141 KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 4.370e-133
Identity = 204/298 (68.46%), Postives = 228/298 (76.51%), Query Frame = 3
Query:  258 GKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVE 1151
            GKEKE F LCLA  ADG+KVPLR IFKGTPF PP  PGKGK TQPRK SIA EV P NR+K G P  GMSFGVQE SWCD RE  LWI +S +L PNNGS++ QR  ILVLDDFKCH+D+ FIA L++  NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A  DP TGKL P GRG V+TWCK  WA+ITP+ V+TCFKI GLTLALDGSEDHA C+HNFG+GYRELL++QRV     HP V+LPP QLP+VP  ES   N I AA K ++  LLP    R  DSD+E
Sbjct:  262 GKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIE 553          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.230e-131
Identity = 203/308 (65.91%), Postives = 226/308 (73.38%), Query Frame = 3
Query:  228 WCEDARISTGGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVE 1151
            W    R       +E F LCLA  ADG KVPLR IFKGTPF PP  PGKGK TQPRK SIA EV P NR+K G P  GMSFGVQE SWCD REC LWI +S +L PNNGSI+ QR  ILVLDDFKCH+D+ FIA L++  NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A  DP TGKL P GRG V+TWCK  WA+ITP+  +TCFKI GLTLALDGSEDHA C+HNFG+GYRELL++QRV     HP V+LPP QLP+VP  ES   N I AA K ++  LLP    R  DSD+E
Sbjct:  259 WKRPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIE 560          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 1.710e-128
Identity = 209/361 (57.89%), Postives = 238/361 (65.93%), Query Frame = 3
Query:  234 EDARISTGGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGE---------------------------------SIGTNPITAAEKGVQGRLLPPTGGRESDSDVERLEYDSDLECLGVSGGGEKEGE 1217
            +DAR+STGG+EKE F L LA  ADG KV LR IF GTPF PP   GKGK T PRK S+A E+ P NR K GHPA GMSFGVQE SW D REC  W S S +L PNNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT VI IPGGLTPLLQPLDRMLNKQ KRLLR KYTAY+A+A +D  +GKLKP  RG+VSTWCK  W +ITP+ V+TCFKI GLTLALDGSEDHA C HNFGE YR+LL++Q       HP V+LPP +LP+VP                                       +NPI AA+K V+G+LLP     ESDS+VE LE           GGG  EGE
Sbjct:   75 KDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASA-TDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 433          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 6.500e-127
Identity = 195/297 (65.66%), Postives = 224/297 (75.42%), Query Frame = 3
Query:  234 EDARISTGGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTG 1124
            +DARISTGGKEKE F LCLA MADG KVPLR IFKG PF PP+   +GK TQPRKGSIA EV P N+T FG+P +GMSFGVQE SW DA ECTLW+SES    PN+GS+I QR SILVLDDF+               NT+VILIPGGLTPLLQPLDRML+K+MKRL+R +YT Y A+A++DP TGKL+P GRG+VSTWCKE+WAAIT + V+ CFK+ GLTLALDGSED A C HNFGEGYRE+L +QR       PGV+LPP QLPEV    + G NPI  AEK V  +LLPP G
Sbjct:  314 KDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFRT--------------NTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEV--SSASGANPIATAEKEVTAKLLPPEG 594          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 1.690e-124
Identity = 197/299 (65.89%), Postives = 217/299 (72.58%), Query Frame = 3
Query:  255 GGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVE 1151
            GGKEKE F LCLA  ADG KVPLR IFKGTPF PP  PGKGK TQPRK SIA EV P NR+K G P  GMSFGVQE SWCD REC LWI  S +L PNNGSI+ QR  ILVLDDFKCH+D+ FIA L++  NT VI IPGGLTPLLQ LDRMLNKQMKRLL              P TGKL P GRG V+TWCK  WA+ITP+ V+TCFKI GLTLALDGSEDHA C+HNFG+GYRELL++QRV     HP V+LPP QLP+VP  ES   N I AA K ++  LLP    R  DSD+E
Sbjct:  273 GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAELLP----RGDDSDIE 565          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 7.710e-124
Identity = 213/375 (56.80%), Postives = 249/375 (66.40%), Query Frame = 3
Query:  234 EDARISTGGKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKY------------------------------------------------TAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVERLEYDSDLECL-----GVSGG 1199
            +DARISTGGKEK+ F  CLA MADG KVP R IFKG PF PP+  G+ K TQ RKG IA EV   NRTKFG+P +GM F VQE SWCDARECTLW+SES R  PN+GS+I QR SILVLDDF+CHR E+F+ DLR+R NT+VILIPGGLTPLLQPLDRMLNK+MKRL+RG                                                  T Y A+A++DP TGKL+P GRG+VST  KE+WAAITP+ V+ CFK+ GLTLALDGSED A   HNFGEGYRE+L +Q    E  HPGV+LPP QLPEV    + G NPI  AEK V  +LLPP G  +SD +VE ++ DSD+E L     G +GG
Sbjct:  210 KDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEV--SSAPGANPIATAEKEVTAKLLPPEG--DSDDEVEIIDGDSDVELLDGPWVGAAGG 580          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.070e-123
Identity = 185/278 (66.55%), Postives = 212/278 (76.26%), Query Frame = 3
Query:  282 LCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLP 1115
            L LA MADG KV  R IFKGTPF  P   G GK T PRK S+A E+ P NR K GHPA GMSFGVQE SW D REC  W S S +L PNNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT VI IPGGLTPLLQPLD  LNKQMKRLLRGK+TAY+++AV+D  +GKLKP  RG+VSTWCKE W +ITP+ V+TCFKI GLTLALDGSEDHA C HNFGE YR+LL++Q       HP V+LPP +LP+VP G    +NPITAA+K V+G+LLP
Sbjct:    2 LVLAVMADGKKVSPRIIFKGTPFTSPTVSGNGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLP 275          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 3.720e-123
Identity = 184/278 (66.19%), Postives = 208/278 (74.82%), Query Frame = 3
Query:  258 GKEKEGFNLCLAAMADGSKVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEK 1091
            GKEKE F L LA MADG KV  R IFKGTPF PP   GKGK T PRK S+A E+ P NR K  HPA GMSFGVQ  SW D REC  WIS S +L PNNGSI+ QRP ILVLDDFKCH+DE FIA L++  NT +I IPGG+T LLQPLDR+LNKQMKRLLRGKYTAY+A+AV+D  +GKLKP  RG+VSTWCKE W +ITP+ V+TCF I  LTLALDGSEDHA C HNFGE YR+LL +Q       HP V+LPP +LP+VP       NPITAA+K
Sbjct:   10 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVPG--RFDPNPITAAQK 285          
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 1.220e-122
Identity = 201/343 (58.60%), Postives = 234/343 (68.22%), Query Frame = 3
Query:  222 EAWCEDARISTGGKEKEGFNLCLAAMADGS------------KVPLRTIFKGTPFNPPNKPGKGKRTQPRKGSIATEVAPGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESSRLHPNNGSIITQRPSILVLDDFKCHRDEAFIADLRKR*NTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVSDPTTGKLKPWGRGMVSTWCKETWAAITPDVVETCFKIFGLTLALDGSEDHA*CMHNFGEGYRELLQKQRVALEEAHPGVSLPPFQLPEVPDGESIGTNPITAAEKGVQGRLLPPTGGRESDSDVERLEYDSDLECLGVSGGGEKEG 1214
            E   +DARI+TGG   EG  L L+   +G+            KV  R I KGTPF PP   GKGK T PRK  +A E  P NR + GHPA GMSFGVQE SW D REC  WIS S +L PNNGSI+ QRP ILVLDD KCH+ E FIA L++  NT VI IPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+ +AV+D  +GKLKP  RG+VSTWCKE W +ITP+ V++CFKI GLTLALDGSEDHA C H+FGE   +LL++Q       HP V+LPP +LP+VP G    +NPITAA+K V+G+LLP     ESDS+VE LE           GGG  EG
Sbjct:    9 ETGAKDARITTGG---EGELLFLSKQREGTLHVRSGCHGGRQKVLPRIIVKGTPFIPPTVSGKGKSTLPRKNYVAWENHPANRAEHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEG 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5169.12445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE8.950e-13965.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE4.370e-13368.46DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE1.230e-13165.91DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE1.710e-12857.89DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE6.500e-12765.66DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE1.690e-12465.89DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE7.710e-12456.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8R4_9PHAE1.070e-12366.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4U1_9PHAE3.720e-12366.19DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQK9_9PHAE1.220e-12258.60DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5169contigH-elongata_contig5169:7463..8919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.5
Seed ortholog evalue8.4e-21
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Exons2
Model size1217
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5169.12445.1prot_H-elongata_contig5169.12445.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5169 7463..8368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930846.0805697-CDS-H-elongata_contig5169:7462..77201622930846.0805697-CDS-H-elongata_contig5169:7462..7720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5169 7463..7720 +
1691679595.4120266-CDS-H-elongata_contig5169:7462..77201691679595.4120266-CDS-H-elongata_contig5169:7462..7720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5169 7463..7720 +
1622930846.104557-CDS-H-elongata_contig5169:7960..83681622930846.104557-CDS-H-elongata_contig5169:7960..8368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5169 7961..8368 +
1691679595.4226894-CDS-H-elongata_contig5169:7960..83681691679595.4226894-CDS-H-elongata_contig5169:7960..8368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5169 7961..8368 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930846.1238256-UTR-H-elongata_contig5169:8368..89191622930846.1238256-UTR-H-elongata_contig5169:8368..8919Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5169 8369..8919 +
1691679595.4310822-UTR-H-elongata_contig5169:8368..89191691679595.4310822-UTR-H-elongata_contig5169:8368..8919Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5169 8369..8919 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5169.12445.1

>prot_H-elongata_contig5169.12445.1 ID=prot_H-elongata_contig5169.12445.1|Name=mRNA_H-elongata_contig5169.12445.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
MAFGTVKKLRKVLLERAGKIFAERNPCASDELPVNGEELSSEQLESVTAE
VFQELGNMDQTPVQHEMPVEATLEKRGARMLASAQEARRRRASISVLLPW
RTAARFLYAPSSKARRSTRRTSRGRARELSRGRGPSQQRLPRGIVPNSGT
RRRACRLVCRRIAGVMRGSAPFGSRRARGFTPTTEASSRSARASWCWTTS
SATVTRPSSLTSERGETPASS*
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mRNA from alignment at H-elongata_contig5169:7463..8919+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5169.12445.1 ID=mRNA_H-elongata_contig5169.12445.1|Name=mRNA_H-elongata_contig5169.12445.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1457bp|location=Sequence derived from alignment at H-elongata_contig5169:7463..8919+ (Himanthalia elongata Himel1 dioecious)
ATGGCGTTTGGAACAGTGAAGAAGCTTCGGAAGGTTCTCCTGGAGCGCGC TGGGAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTCCCCG TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTGACGGCGGAG GTTTTCCAAGAACTCGGCAATATGGACCAGACGCCCGTCCAGCACGAGAT GCCGGTGGAGGCAACTCTGGAGAAGCGTGGTGCGAGGATGCTCGCATCAG CACAGGAGGTGAGAATATTGCGGCTGCGTTCTTGTCGATAGTATGTATTT TGCATCGTTTTAATGTTTTTATTGTACGGTTGCTGCTACTGCTGCTGCTG CCACAACGCGATTTTTGTTTCTCTAGATGATAGGTATTTTTTGCACCGTA AAATGCCCCCGCATGGTGAATACGAAGTATAAATCAAAACATGCAACTGT AACCTCCTCTCGCCCTCTCGTTGTGTCTTTGTGTCGACGCCCCCGTAGGC AAGGAGAAGGAGGGCTTCAATCTCTGTCTTGCTGCCATGGCGGACGGCAG CAAGGTTCCTCTACGCACCATCTTCAAAGGCACGCCGTTCAACCCGCCGA ACAAGCCGGGGAAGGGCAAGAGAACTCAGCCGCGGAAGGGGTCCATCGCA ACAGAGGTTGCCCCGGGGAATCGTACCAAATTCGGGCACCCGGCGGCGGG CATGTCGTTTGGTGTGCAGGAGAATAGCTGGTGTGATGCGCGGGAGTGCA CCCTTTGGATCTCGGAGAGCTCGAGGCTTCACCCCAACAACGGAAGCATC ATCACGCAGCGCCCGAGCATCCTGGTGTTGGACGACTTCAAGTGCCACCG TGACGAGGCCTTCATCGCTGACCTCCGAAAGAGGTGAAACACCAGCGTCA TCCTGATCCCGGGCGGGTTGACTCCTCTCCTCCAGCCGCTGGACCGCATG CTCAACAAGCAGATGAAGCGGCTACTGCGGGGGAAATACACCGCCTACAC CGCCACAGCGGTTTCCGATCCAACTACGGGCAAGCTGAAGCCGTGGGGCC GTGGGATGGTGTCCACGTGGTGCAAGGAGACCTGGGCAGCCATCACCCCC GACGTGGTCGAGACTTGCTTCAAGATCTTCGGTCTTACGCTTGCGCTTGA CGGTAGCGAGGACCACGCCTGATGCATGCACAACTTCGGTGAGGGATACC GCGAGCTGCTCCAGAAGCAGCGCGTTGCGTTGGAGGAGGCACACCCCGGC GTTTCGCTGCCCCCGTTCCAGCTACCAGAGGTACCCGACGGCGAGTCGAT CGGCACCAATCCCATCACGGCTGCAGAGAAGGGGGTTCAAGGACGTCTGC TACCTCCTACCGGTGGGAGGGAAAGCGACAGCGATGTGGAGCGGCTTGAA TATGACAGCGATCTAGAGTGCTTGGGCGTGTCGGGGGGTGGGGAGAAGGA AGGAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig5169:7463..8919+

>mRNA_H-elongata_contig5169.12445.1 ID=mRNA_H-elongata_contig5169.12445.1|Name=mRNA_H-elongata_contig5169.12445.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1332bp|location=Sequence derived from alignment at H-elongata_contig5169:7463..8919+ (Himanthalia elongata Himel1 dioecious)
ATGGCGTTTGGAACAGTGAAGAAGCTTCGGAAGGTTCTCCTGGAGCGCGC
TGGGAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTCCCCG
TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTGACGGCGGAG
GTTTTCCAAGAACTCGGCAATATGGACCAGACGCCCGTCCAGCACGAGAT
GCCGGTGGAGGCAACTCTGGAGAAGCGTGGTGCGAGGATGCTCGCATCAG
CACAGGAGATGGCGTTTGGAACAGTGAAGAAGCTTCGGAAGGTTCTCCTG
GAGCGCGCTGGGAAAATCTTCGCTGAGCGCAACCCGTGTGCTTCTGATGA
GCTCCCCGTGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCAGTGA
CGGCGGAGGTTTTCCAAGAACTCGGCAATATGGACCAGACGCCCGTCCAG
CACGAGATGCCGGTGGAGGCAACTCTGGAGAAGCGTGGTGCGAGGATGCT
CGCATCAGCACAGGAGGCAAGGAGAAGGAGGGCTTCAATCTCTGTCTTGC
TGCCATGGCGGACGGCAGCAAGGTTCCTCTACGCACCATCTTCAAAGGCA
CGCCGTTCAACCCGCCGAACAAGCCGGGGAAGGGCAAGAGAACTCAGCCG
CGGAAGGGGTCCATCGCAACAGAGGTTGCCCCGGGGAATCGTACCAAATT
CGGGCACCCGGCGGCGGGCATGTCGTTTGGTGTGCAGGAGAATAGCTGGT
GTGATGCGCGGGAGTGCACCCTTTGGATCTCGGAGAGCTCGAGGCTTCAC
CCCAACAACGGAAGCATCATCACGCAGCGCCCGAGCATCCTGGTGTTGGA
CGACTTCAAGTGCCACCGTGACGAGGCCTTCATCGCTGACCTCCGAAAGA
GGTGAAACACCAGCGTCATCCTGAGCAAGGAGAAGGAGGGCTTCAATCTC
TGTCTTGCTGCCATGGCGGACGGCAGCAAGGTTCCTCTACGCACCATCTT
CAAAGGCACGCCGTTCAACCCGCCGAACAAGCCGGGGAAGGGCAAGAGAA
CTCAGCCGCGGAAGGGGTCCATCGCAACAGAGGTTGCCCCGGGGAATCGT
ACCAAATTCGGGCACCCGGCGGCGGGCATGTCGTTTGGTGTGCAGGAGAA
TAGCTGGTGTGATGCGCGGGAGTGCACCCTTTGGATCTCGGAGAGCTCGA
GGCTTCACCCCAACAACGGAAGCATCATCACGCAGCGCCCGAGCATCCTG
GTGTTGGACGACTTCAAGTGCCACCGTGACGAGGCCTTCATCGCTGACCT
CCGAAAGAGGTGAAACACCAGCGTCATCCTGA
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