mRNA_H-elongata_contig51246.12382.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51246.12382.1
Unique NamemRNA_H-elongata_contig51246.12382.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: D8LJE9_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJE9_ECTSI)

HSP 1 Score: 499 bits (1284), Expect = 6.100e-172
Identity = 249/269 (92.57%), Postives = 260/269 (96.65%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +VQKIMNHFK+QRQTLLFSATMPQKFQDFAK+VLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQ+ERNEAIKLFK G KDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINK  MVEESALLDLKHLLMEAQQRVPPVLMALEDP  +M+EVDGVKGCAFCGGLGHRITNCPKIDK A++ +GAQ+DVL+ TGGYGGDW
Sbjct:  394 EVQKIMNHFKQQRQTLLFSATMPQKFQDFAKDVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQEERNEAIKLFKEGVKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINK--MVEESALLDLKHLLMEAQQRVPPVLMALEDPDQEMDEVDGVKGCAFCGGLGHRITNCPKIDKTASQKAGAQRDVLADTGGYGGDW 660
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A836CIR5_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR5_9STRA)

HSP 1 Score: 470 bits (1210), Expect = 6.490e-162
Identity = 232/269 (86.25%), Postives = 253/269 (94.05%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +V+ IMNHFK+QRQTLLFSATMPQKFQDFAKNVLV+PV+VNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGK+Q +RN+AI  FK G KDVLIATDIAAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINKA  V ESALLDLKHLL+EAQQRVPPVLMAL+DP  D++++ GVKGCAFCGGLGHRIT+CPKIDK+A ++ GA+KD L+G+GGYGGDW
Sbjct:  309 EVRSIMNHFKQQRQTLLFSATMPQKFQDFAKNVLVQPVIVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKDQADRNKAILQFKNGEKDVLIATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKA--VPESALLDLKHLLIEAQQRVPPVLMALDDPDEDIQDMGGVKGCAFCGGLGHRITDCPKIDKDARRLGGARKDALAGSGGYGGDW 575
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S2Y1C3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1C3_9STRA)

HSP 1 Score: 452 bits (1163), Expect = 3.180e-159
Identity = 223/269 (82.90%), Postives = 244/269 (90.71%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +VQ IMNHF  QRQTLLFSATMPQKFQ+FAK+ LVKP+LVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT+PPV IFCE+K DVDDIHEYLLLKGV+AVSIHGGK+Q ERNEAI LFK G KDVL+ATD+AAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINKA  VEES LLDLKHLL+EA+QRVPPVLMALEDP  D+  + GV+GCAFCGGLGHRIT CPK+DK+A  I+  ++D+L GTGGYGGDW
Sbjct:   11 EVQAIMNHFTGQRQTLLFSATMPQKFQEFAKDTLVKPILVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVAIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQAERNEAISLFKTGAKDVLVATDVAAKGLDFPDIQHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKA--VEESTLLDLKHLLLEAKQRVPPVLMALEDPDEDLAALGGVRGCAFCGGLGHRITQCPKLDKDARSIAQGKRDLLVGTGGYGGDW 277
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S3XUS9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS9_HETAK)

HSP 1 Score: 453 bits (1166), Expect = 2.040e-154
Identity = 222/269 (82.53%), Postives = 246/269 (91.45%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +VQ IMNHF  QRQTLLFSATMP+KFQDFAK+VLVKPV+VNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVC+FCE+K DVDDIHEYLLLKGV+AVSIHG K+Q ERNEAI  FK G+KDVL+ATD+AAKGLDFPDIQHV+NFDMPDEIENYVHRIGRTGRCGKTGVATTFINK   VEES LLDLKHLL+EA+QRVPPVL AL+DP  D+E + GV+GCAFCGGLGHRIT+CPK+DK+A +I+  Q+D L GTGGYGGDW
Sbjct:  370 EVQTIMNHFTCQRQTLLFSATMPKKFQDFAKDVLVKPVVVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCVFCERKGDVDDIHEYLLLKGVEAVSIHGSKDQAERNEAIDSFKRGDKDVLVATDVAAKGLDFPDIQHVVNFDMPDEIENYVHRIGRTGRCGKTGVATTFINKN--VEESTLLDLKHLLIEAKQRVPPVLEALDDPDRDLEGLGGVRGCAFCGGLGHRITDCPKMDKDANRIAQGQRDFLEGTGGYGGDW 636
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S3M683_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M683_9STRA)

HSP 1 Score: 447 bits (1151), Expect = 2.080e-153
Identity = 219/269 (81.41%), Postives = 244/269 (90.71%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +V  I++ F+R RQT+LFSATMPQKFQDFAKN L+KP+LVNVGRAGAANLDVIQEVEYVK+EAKIVYLLECLQKTAPPV IFCE+K DVDDIHEYLLLKGV+AVSIHGGK+Q+ERNEAI+L+K G KDVL+ATDIAAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINK   VEESALLDLKHLL+EA+QRVPPVL AL+DP  D  ++DGVKGCAFCGGLGHRITNCPK+DK+A +I   +KD L+  GGYGGDW
Sbjct:  278 EVHNIIDKFRRPRQTILFSATMPQKFQDFAKNTLIKPLLVNVGRAGAANLDVIQEVEYVKKEAKIVYLLECLQKTAPPVIIFCERKNDVDDIHEYLLLKGVEAVSIHGGKDQEERNEAIRLYKEGTKDVLVATDIAAKGLDFPDIQHVINFDMPGEIENYVHRIGRTGRCGKTGVATTFINKD--VEESALLDLKHLLIEAKQRVPPVLQALDDPDDDFLDLDGVKGCAFCGGLGHRITNCPKLDKDARRIGAGKKDSLAQNGGYGGDW 544
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S2AYX9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AYX9_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 6.890e-149
Identity = 215/269 (79.93%), Postives = 242/269 (89.96%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEE---VDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYG 801
            +VQ I++ FK+QRQTLLFSATMP+KFQDFA+ VLV+P+LVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT+PPV IFCE+KQDVDDIHEYLLLKGV+AVSIHGGK+QDERNEAI  FK  +KDVL+ATDIAAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINK   VEES+LLDLK LL+EA+QRVPPVL A++DP A  EE   V GV+GCAFCGGLGHRIT+CPK DK+A ++   Q+D+L G+GGYG
Sbjct:   56 EVQAIVSFFKKQRQTLLFSATMPKKFQDFAQEVLVRPILVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCERKQDVDDIHEYLLLKGVEAVSIHGGKDQDERNEAIAHFKDSSKDVLVATDIAAKGLDFPDIQHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINK--QVEESSLLDLKQLLLEAKQRVPPVLQAIQDPFAAEEELNVVGGVRGCAFCGGLGHRITDCPKRDKDARRLGAGQRDMLLGSGGYG 322
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S2SHH4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHH4_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 2.690e-146
Identity = 219/271 (80.81%), Postives = 242/271 (89.30%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVD---GVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGD 807
            +VQ I++HFK+QRQTLLFSATMPQKFQDFA+NVLV+PV+VNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPV IFCEKKQDVDDIHEYLLLKGV+AVSIHGGK+QDERNEAI LFK   KDVL+ATD+AAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINK   VEES+LLDLK LL+EA+QRVPPVL AL DP AD  E+    GV+GCAFCGGLGHRIT CPK DK+A ++    +D+L G+ GYGG+
Sbjct:  387 EVQAIVSHFKKQRQTLLFSATMPQKFQDFARNVLVRPVVVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVLIFCEKKQDVDDIHEYLLLKGVEAVSIHGGKDQDERNEAIDLFKDCRKDVLVATDVAAKGLDFPDIQHVINFDMPAEIENYVHRIGRTGRCGKTGVATTFINKN--VEESSLLDLKQLLIEAKQRVPPVLQALSDPFADEGELSALGGVRGCAFCGGLGHRITECPKRDKDARRLGAGVRDMLRGSEGYGGE 655
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S1Z9L8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z9L8_TRICV)

HSP 1 Score: 423 bits (1088), Expect = 2.930e-146
Identity = 204/269 (75.84%), Postives = 235/269 (87.36%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGDW 810
            +V +IMNHF  QRQTLLFSAT P+KFQDFAK  LV+P++VNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPV IFCE + DVDDIHEYLLLKGVDAVSIHGGK+Q+ERNEAI+L+K G KDVL+ATD+AAKGLDF DIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINKA   EE+ LLDLKHLL EA QR+PPVLM ++DP  ++ + DG +GC+FCGGLGH I +CPKIDK+A +++G  KD ++   GYGG++
Sbjct:  112 EVGEIMNHFTHQRQTLLFSATFPKKFQDFAKKTLVRPIVVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVIIFCEHQSDVDDIHEYLLLKGVDAVSIHGGKDQEERNEAIRLYKEGKKDVLVATDVAAKGLDFADIQHVINFDMPSEIENYVHRIGRTGRCGKTGVATTFINKAC--EETTLLDLKHLLKEAHQRIPPVLMIMDDPLENLTKEDGTRGCSFCGGLGHSIVDCPKIDKDARRVAGGHKDAIASGDGYGGEY 378
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A485KPZ7_9STRA (Aste57867_9941 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPZ7_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 3.640e-146
Identity = 220/270 (81.48%), Postives = 239/270 (88.52%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTA-DMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSG-TGGYGGD 807
            +V  I NHFK QRQTLLFSATMPQKFQDFAK VLV+PVLVNVGRAGAANLDV+QEVEYVKQEAKIVYLLECLQKTAPPV IFCE+K DVDDIHEYLLLKGV+AVSIHGGK+Q ERNEAI LFK G+KDVL+ATDIAAKGLDFPDIQHVINFDMP EIENYVHRIGRTGRCGKTGVATTFINK   V ESALLDLKHLL+EA+QRVPPVL ALEDP    ++   G KGCAFCGGLGHRIT+CPK+D NA K++  ++D L G +GGYGGD
Sbjct:  350 EVASIFNHFKHQRQTLLFSATMPQKFQDFAKQVLVRPVLVNVGRAGAANLDVLQEVEYVKQEAKIVYLLECLQKTAPPVLIFCERKGDVDDIHEYLLLKGVEAVSIHGGKDQVERNEAIDLFKRGDKDVLVATDIAAKGLDFPDIQHVINFDMPVEIENYVHRIGRTGRCGKTGVATTFINKN--VPESALLDLKHLLVEAKQRVPPVLKALEDPMEHSLDNKTGSKGCAFCGGLGHRITDCPKLDSNARKLNAGRRDYLGGQSGGYGGD 617
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BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Match: A0A7S1XQX1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQX1_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 7.170e-145
Identity = 213/268 (79.48%), Postives = 238/268 (88.81%), Query Frame = 1 
Query:    4 QVQKIMNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVSIHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPDEIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRVPPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQKDVLSGTGGYGGD 807
            +VQ I+NHF RQRQTLLFSATMPQKFQDFAKN LV+PVLVNVGRAGAANLDVIQEVEYVK EAKIVYLLECLQKTAPPVCIFCE+K DVDDIHEYLLLKGV AVSIHGGK+Q ER  AI+ FK   KDVL+ATDIAAKGLDFPDIQHVINFDMP+EIENYVHRIGRTGRCG+TGVATTFINK   V E ALLDLKHLL+EA+QRVPPVL+AL+DP  D+  V GV+GC++CGGLGHRIT+CPK+DK A + +G ++D+L G GGYG +
Sbjct:  372 EVQGIINHFTRQRQTLLFSATMPQKFQDFAKNTLVRPVLVNVGRAGAANLDVIQEVEYVKSEAKIVYLLECLQKTAPPVCIFCERKGDVDDIHEYLLLKGVAAVSIHGGKDQAERTAAIEAFKRLEKDVLVATDIAAKGLDFPDIQHVINFDMPEEIENYVHRIGRTGRCGRTGVATTFINKN--VPEPALLDLKHLLVEAKQRVPPVLLALDDPDEDLSGVGGVRGCSYCGGLGHRITDCPKLDKTARQQAGQRRDMLRGGGGYGAE 637
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51246.12382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJE9_ECTSI6.100e-17292.57DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CIR5_9STRA6.490e-16286.25RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2Y1C3_9STRA3.180e-15982.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XUS9_HETAK2.040e-15482.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3M683_9STRA2.080e-15381.41Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2AYX9_9STRA6.890e-14979.93Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2SHH4_9STRA2.690e-14680.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1Z9L8_TRICV2.930e-14675.84Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A485KPZ7_9STRA3.640e-14681.48Aste57867_9941 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S1XQX1_9STRA7.170e-14579.48Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51246contigH-elongata_contig51246:1655..4038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score494.2
Seed ortholog evalue3.8e-137
Seed eggNOG ortholog2880.D8LJE9
Preferred nameDDX41
KEGG koko:K13116
GOsGO:0000375,GO:0000377,GO:0000398,GO:0001817,GO:0001819,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0008026,GO:0008104,GO:0008150,GO:0008152,GO:0008186,GO:0008219,GO:0008283,GO:0008380,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010501,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012501,GO:0012505,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032502,GO:0032991,GO:0033036,GO:0034097,GO:0034641,GO:0035456,GO:0035458,GO:0035770,GO:0036464,GO:0042221,GO:0042623,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060293,GO:0065007,GO:0070013,GO:0070035,GO:0070887,GO:0071013,GO:0071310,GO:0071345,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0098542,GO:0140098,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.ATP-dependent RNA helicase activity
EggNOG OGsKOG0341@1,KOG0341@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041
Hectar predicted targeting categoryother localisation
Exons5
Model size813
Cds size795
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51246.12382.1prot_H-elongata_contig51246.12382.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51246 1655..4020 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930838.988908-CDS-H-elongata_contig51246:1654..18011622930838.988908-CDS-H-elongata_contig51246:1654..1801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 1655..1801 -
1691679592.1470625-CDS-H-elongata_contig51246:1654..18011691679592.1470625-CDS-H-elongata_contig51246:1654..1801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 1655..1801 -
1622930839.0300374-CDS-H-elongata_contig51246:2150..22611622930839.0300374-CDS-H-elongata_contig51246:2150..2261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 2151..2261 -
1691679592.1618714-CDS-H-elongata_contig51246:2150..22611691679592.1618714-CDS-H-elongata_contig51246:2150..2261Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 2151..2261 -
1622930839.0474224-CDS-H-elongata_contig51246:2556..27391622930839.0474224-CDS-H-elongata_contig51246:2556..2739Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 2557..2739 -
1691679592.1790042-CDS-H-elongata_contig51246:2556..27391691679592.1790042-CDS-H-elongata_contig51246:2556..2739Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 2557..2739 -
1622930839.065115-CDS-H-elongata_contig51246:3294..34021622930839.065115-CDS-H-elongata_contig51246:3294..3402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 3295..3402 -
1691679592.1941767-CDS-H-elongata_contig51246:3294..34021691679592.1941767-CDS-H-elongata_contig51246:3294..3402Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 3295..3402 -
1622930839.0802457-CDS-H-elongata_contig51246:3774..40201622930839.0802457-CDS-H-elongata_contig51246:3774..4020Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 3775..4020 -
1691679592.2041118-CDS-H-elongata_contig51246:3774..40201691679592.2041118-CDS-H-elongata_contig51246:3774..4020Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51246 3775..4020 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930839.0973504-UTR-H-elongata_contig51246:4020..40381622930839.0973504-UTR-H-elongata_contig51246:4020..4038Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51246 4021..4038 -
1691679592.2194755-UTR-H-elongata_contig51246:4020..40381691679592.2194755-UTR-H-elongata_contig51246:4020..4038Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51246 4021..4038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51246.12382.1

>prot_H-elongata_contig51246.12382.1 ID=prot_H-elongata_contig51246.12382.1|Name=mRNA_H-elongata_contig51246.12382.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
MNHFKRQRQTLLFSATMPQKFQDFAKNVLVKPVLVNVGRAGAANLDVIQE
VEYVKQEAKIVYLLECLQKTAPPVCIFCEKKQDVDDIHEYLLLKGVDAVS
IHGGKEQDERNEAIKLFKAGNKDVLIATDIAAKGLDFPDIQHVINFDMPD
EIENYVHRIGRTGRCGKTGVATTFINKASMVEESALLDLKHLLMEAQQRV
PPVLMALEDPTADMEEVDGVKGCAFCGGLGHRITNCPKIDKNATKISGAQ
KDVLSGTGGYGGDW*
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mRNA from alignment at H-elongata_contig51246:1655..4038-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51246.12382.1 ID=mRNA_H-elongata_contig51246.12382.1|Name=mRNA_H-elongata_contig51246.12382.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2384bp|location=Sequence derived from alignment at H-elongata_contig51246:1655..4038- (Himanthalia elongata Himel1 dioecious)
AAACAGGTGCAGAAAATTATGAACCATTTCAAGCGACAACGTCAGACGCT
GCTCTTCTCGGCCACCATGCCCCAAAAGTTTCAAGATTTCGCGAAGAACG
TTCTCGTAAAACCCGTGCTGGTGAACGTCGGGCGGGCGGGCGCCGCGAAC
CTGGACGTGATCCAGGAGGTGGAGTACGTGAAGCAGGAGGCAAAAATCGT
GTATCTGCTAGAGTGCCTGCAGAAGACGGCTCCTCCGGTTTGCATTTTTT
GCGAGAAGAAACAGGTGAGGGAGCTGCTTCCTCTCTGTAGACAGTGCTCT
CGCGGGAGTAGGGGTATCGAAACGCCTTGGGTGGTAAGTAGTAGCCGCGG
CGCGACACCAGGCGTTGCAGCAGCACATCGTCCGATGTATATCCGTGCCA
CCCCGTGTTTTTGATTAGAAAGAGCGAAGAAATCGGCTGTGTCGGAGCGA
CAGGAAGGCCCCCCCCCCCCCGTGTGCGGCTATTTCTTCGAACAGCGTAC
CCGTGCTCTTTGCTCCGAAAAAAAAAGTGCTTGAGGCGTTTCTGAAACGG
GTGATACTCCAAGCCTCGAGGTGGGGTACGACAAGAAGCGCAATACCTCA
CTACACCGCTACCTTCCCCATCTGTCGACCCCGCAGGACGTGGACGACAT
TCACGAGTACCTCCTGCTGAAGGGCGTCGACGCGGTGAGTATCCACGGGG
GGAAGGAACAAGACGAGCGAAACGAAGCCATCAAACTCTTCAAGGTGCGC
ATGTAAAGACGAGGAGTGGGTGGGGAGGGGACGCTGGAGGGGTCCGTTCG
AGCCCGCACGGCACTTGTTATAGTTTCAAGACACGGTCGGACTCGGACTC
GTAGAGCAGGGAAACACTTGGGGTTTTCTCGAAGGTTTTGCGCTCGACCC
CGATCACCGATAACGCTCATTTCCCTTCTCCGTCTCACTTGTATTTTTTC
TCTCAATTCCGGCGTCGCACGATTCAATATATGCAACATTATCTACAACA
ATATGTCCGAAATGTTTCCGAAATTTTGAAGCGCAAGCAATGGTCGCTCG
CTCGTAAGCAAATACCTTCGGGTTTTTTCCAGTCGCTCTACTAAACACTA
TTATGGCGGTATAAAATACACGGACAACCGCCCGCCCCCCCCCCCCCACC
CCCCCCCCAACCCCCCCACCCCACCACCCCNNNNNNNNNNCCAGTCGCTC
AACTAAACCCTATTATGGCGGTATAAAATGCCCCACCCCCCGCCCCCCCC
ACCTCTCACCCTATCCACTTTAACCAAAAATCGATGGCGCATTCGACAGG
CGGGAAATAAAGACGTGTTGATTGCCACCGACATCGCCGCGAAGGGCCTG
GATTTCCCCGACATCCAGCACGTCATCAACTTCGACATGCCGGACGAGAT
CGAGAACTACGTGCACAGGATCGGACGAACCGGGCGCTGCGGGAAGACGG
GGGTCGCGACGACTTTCATAAACAAGGCAAGTGTATTTTTTTGTGACGTA
TGTTATGTTGTATGACTCGACTGTGCGCGCCGTGTTAGCCCCGTGCACCG
CCTCTCGCAGAGGTGAGATCGCACCAAGTCTGGGATTGGGAGACGACGCG
GCTCGATCTCGATCTCGGTGGCAGCAATCCTTTTATCAACCGCTGACGAT
TTTTTCACCGTATGCTGTGATAGTGCTGCGCGTCAGCGGGTGGCCTTGCT
TGGCGTGCCCGCCCGCCCACGCTGCCGCGCCCAATCATAAGCAAATGATT
TGTGGCCCGTGTTTTTTACGATCGCAGATGGTAGAGGAGTCTGCCTTGCT
GGACCTGAAGCACCTACTCATGGAGGCTCAGCAGCGCGTCCCGCCTGTCC
TAATGGCGTTGGAAGACCCGACAGCAGACATGGAAGAGGTGCGGCAAGGT
TATCAGTAGTTTTTGAAAGAAAGGATGTTTGTGTGGTATAGGCGTAGGCC
CCGTCGTCCGTCGATTACTTTCAAAGTTTCAGGCAGCAGCGCAGGAGCAG
TCCATCCAGAGCTCTTGGAGGAAATTATATCCTTGTTTCCCGCGGCGATC
GGGAAGGGTGCGCCTATTCTTCAGACGTGATTTCGGATAGGAATGTGCCC
CAGCTTGAAAAACTTCACGCCCAATCCAAGCAGACAAGGTTAAAGGCAAT
ACGCCAGCTTTTTCGACCCGTAGCCCTCCTTGCTCCTAGAAAGAAAAAAT
ATGTAAGTCTCGGTACCGTTTTTGCCCCTCTAAACAGGTTGACGGCGTGA
AAGGCTGTGCCTTCTGCGGTGGGCTGGGCCACCGTATCACCAATTGTCCC
AAGATAGACAAGAACGCGACGAAAATCAGCGGGGCCCAGAAGGACGTGCT
CTCAGGAACTGGCGGCTACGGGGGAGACTGGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig51246:1655..4038-

>mRNA_H-elongata_contig51246.12382.1 ID=mRNA_H-elongata_contig51246.12382.1|Name=mRNA_H-elongata_contig51246.12382.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at H-elongata_contig51246:1655..4038- (Himanthalia elongata Himel1 dioecious)
ATGAACCATTTCAAGCGACAACGTCAGACGCTGCTCTTCTCGGCCACCAT
GCCCCAAAAGTTTCAAGATTTCGCGAAGAACGTTCTCGTAAAACCCGTGC
TGGTGAACGTCGGGCGGGCGGGCGCCGCGAACCTGGACGTGATCCAGGAG
GTGGAGTACGTGAAGCAGGAGGCAAAAATCGTGTATCTGCTAGAGTGCCT
GCAGAAGACGGCTCCTCCGGTTTGCATTTTTTGCGAGAAGAAACAGATGA
ACCATTTCAAGCGACAACGTCAGACGCTGCTCTTCTCGGCCACCATGCCC
CAAAAGTTTCAAGATTTCGCGAAGAACGTTCTCGTAAAACCCGTGCTGGT
GAACGTCGGGCGGGCGGGCGCCGCGAACCTGGACGTGATCCAGGAGGTGG
AGTACGTGAAGCAGGAGGCAAAAATCGTGTATCTGCTAGAGTGCCTGCAG
AAGACGGCTCCTCCGGTTTGCATTTTTTGCGAGAAGAAACAGGACGTGGA
CGACATTCACGAGTACCTCCTGCTGAAGGGCGTCGACGCGGTGAGTATCC
ACGGGGGGAAGGAACAAGACGAGCGAAACGAAGCCATCAAACTCTTCAAG
GACGTGGACGACATTCACGAGTACCTCCTGCTGAAGGGCGTCGACGCGGT
GAGTATCCACGGGGGGAAGGAACAAGACGAGCGAAACGAAGCCATCAAAC
TCTTCAAGGCGGGAAATAAAGACGTGTTGATTGCCACCGACATCGCCGCG
AAGGGCCTGGATTTCCCCGACATCCAGCACGTCATCAACTTCGACATGCC
GGACGAGATCGAGAACTACGTGCACAGGATCGGACGAACCGGGCGCTGCG
GGAAGACGGGGGTCGCGACGACTTTCATAAACAAGGCAAGTGCGGGAAAT
AAAGACGTGTTGATTGCCACCGACATCGCCGCGAAGGGCCTGGATTTCCC
CGACATCCAGCACGTCATCAACTTCGACATGCCGGACGAGATCGAGAACT
ACGTGCACAGGATCGGACGAACCGGGCGCTGCGGGAAGACGGGGGTCGCG
ACGACTTTCATAAACAAGGCAAGTATGGTAGAGGAGTCTGCCTTGCTGGA
CCTGAAGCACCTACTCATGGAGGCTCAGCAGCGCGTCCCGCCTGTCCTAA
TGGCGTTGGAAGACCCGACAGCAGACATGGAAGAGATGGTAGAGGAGTCT
GCCTTGCTGGACCTGAAGCACCTACTCATGGAGGCTCAGCAGCGCGTCCC
GCCTGTCCTAATGGCGTTGGAAGACCCGACAGCAGACATGGAAGAGGTTG
ACGGCGTGAAAGGCTGTGCCTTCTGCGGTGGGCTGGGCCACCGTATCACC
AATTGTCCCAAGATAGACAAGAACGCGACGAAAATCAGCGGGGCCCAGAA
GGACGTGCTCTCAGGAACTGGCGGCTACGGGGGAGACTGGTAGGTTGACG
GCGTGAAAGGCTGTGCCTTCTGCGGTGGGCTGGGCCACCGTATCACCAAT
TGTCCCAAGATAGACAAGAACGCGACGAAAATCAGCGGGGCCCAGAAGGA
CGTGCTCTCAGGAACTGGCGGCTACGGGGGAGACTGGTAG
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