mRNA_H-elongata_contig5053.12300.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5053.12300.1
Unique NamemRNA_H-elongata_contig5053.12300.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A6H5JNW3_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNW3_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 2.730e-143
Identity = 214/289 (74.05%), Postives = 248/289 (85.81%), Query Frame = 2 
Query:  461 PSEWPGWVWGCITLWLLTSCYFMLFALAMYLQELKSYAG--RVSFLKMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLFFNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALPYARGMLERQAKEK 1321
            PS+WP W W C+ +W+L SCYF+LFA+AMYLQELKSY G  RVSF KM+AF+LTWM GSL CS + +PDLLLG RERAAE+VHY+G +MG+ MFRI++  P+V GLENLPPDGEKGMVYVSNHQTS+DIA+FY+IG  RKFSWVSKSTVF IPGVGLLMKIA YVAL RG++ SV +MF+DCK+ LA+GWSVMIFPQGTRRRLKVLDFKDGAFQLAIDS S VVPFT+DLPE+LF    QR+KI VH+P+ PGDP FKDV+TLR+HCFD V GALPYA GMLE Q K+K
Sbjct:   43 PSQWPRWAWVCLGVWVLLSCYFLLFAVAMYLQELKSYGGASRVSFPKMLAFSLTWMNGSLLCSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPVRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQK 331
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: D8LS64_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS64_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 2.180e-89
Identity = 150/212 (70.75%), Postives = 170/212 (80.19%), Query Frame = 2 
Query:  719 MGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLFFNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALPYARGMLERQAKEKEAAAAVAAVAE 1354
            MG+ MFRI++  P+V GLENLP DGEKGMVYVSNHQTS+DIA+FY+IG  RKFSWVSKSTVF IPGVGLLMKIA YVAL RG++ SV +MF+DCK+ LA+GWSVMIFPQGTRRRLKVLDFKDGAFQLAIDS S VVPFT+DLPE+LF    QR+KI VH+PI PGDP FKDV+TLR+HCFD V               K+KEAAAA A   E
Sbjct:    1 MGQLMFRILSKPPVVIGLENLPSDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTV-------------MRKQKEAAAAAAMAGE 199
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BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A835YS94_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS94_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.200e-63
Identity = 120/246 (48.78%), Postives = 164/246 (66.67%), Query Frame = 2 
Query:  629 SLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDC-KQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLF-FNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALPYARGMLERQAKEKEAAAAVAAVAENV 1360
            S   SL  +P LL+G R+RA E  HY G V+ + + RI     ++ G+ENLPP  E   VYV+NHQ+++DIA+F+   + R ++WVSK++VF +PGVGLLM++A YV+L+RG K S  +M EDC K  L  GWSV+IFPQGTRRR K+LDFK GAF+LA +++  +VP TI+LPE ++      R ++I+HKPI P DP F+D   L  H F  + GAL Y   ML+RQ  +  AAA + A A  V
Sbjct:    4 SFLGSLPAIPLLLIGQRKRARELTHYNGGVIARTLQRICFYPSVITGMENLPPP-ETACVYVANHQSTVDIAVFF--AIRRNYAWVSKASVFLVPGVGLLMRLAGYVSLQRGSKESGKKMMEDCRKDCLEKGWSVVIFPQGTRRRHKILDFKMGAFKLAQEARVPIVPVTIELPEKMYGIGCKDRPRLIIHKPIAPDDPLFQDRDALLAHTFGTIVGALSYGPAMLQRQRADAAAAARLTAAAAEV 246
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A7S2UZR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 8.600e-48
Identity = 121/292 (41.44%), Postives = 171/292 (58.56%), Query Frame = 2 
Query:  467 EWP---GWVWGCITLWLLTSCYFMLFALAMYLQELKSYAGRVSFLKMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGC----VMGKFMFRIVAARPIVEGLENLPPDGE-KG--------MVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLL-----------ASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLFFNSMQRS----KIIVHKPIHPGDPEFKDVSTLRQ 1249
            EWP   G V G I  ++L   + +++  A+YLQE+K+Y  +V  L+   F L W+YGS +  +   P  +    +    +V   G     V+ ++MFR     P V G+ENLP   E KG        ++YV NHQ+ IDIA+FYF  V R+F+WVSKSTVF IPGVG +M +A+Y+ L+RG   S+ +MF  C++ L           A  +SV IFPQGTRRR ++L FK GAFQLA+++   VVP T+ LP D++FN   R     K+IVHKP+ P D  FK +  +R+
Sbjct:    2 EWPEVLGLVLGLI--FVLFFIWALVYVFAIYLQEMKTYK-KVHVLRFSLFTLKWIYGSAYFVICLFPTWVSVGFQAFHPKVRALGHKKAGVLARWMFRSTFHEPEVVGMENLPAIPEDKGRGKFEHDAVIYVVNHQSMIDIALFYF--VERRFAWVSKSTVFTIPGVGWIMTMAQYIPLERGKGESIAKMFGLCRKSLGASPEGDNTKKADSFSVTIFPQGTRRRFELLPFKAGAFQLAMETGCRVVPITMYLPPDIWFNPSARGGDKCKLIVHKPMDPKD--FKTMEAMRE 286
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BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A7S3Y3G5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3G5_HETAK)

HSP 1 Score: 174 bits (442), Expect = 3.180e-45
Identity = 97/255 (38.04%), Postives = 151/255 (59.22%), Query Frame = 2 
Query:  416 VFGRWSSLRAAMDTVPSEWPGWVW-GCITLWLLTSCYFMLFALAMYLQELKSYAGRVSFLKMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCV------MGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLF 1159
              G W   +A  +        +V  G +   +L S +    A  MY QE +SY G V F +   F+L  +YGS+ C ++ +P ++    ER  + V            + K +FR     P+V+GLENLP +G++ +V+V NHQ+ +D+A+ +F+   R+F++VSK+  F +PG G LM++  +V LKRG+K S++RMFE C Q + S  +++IFPQGTR+R + + FKDGAF  A+D+  TVVP T+ LP DL+
Sbjct:   16 ALGGWQHYQALNELSMESLGAYVVEGLLIALVLYSLWVFFAAYMMYRQERRSY-GEVGFARAFFFSLFCLYGSMICCVLVLPVIVF---ERGTKSVKVRNTAFQKNQQVSKKIFRFFFGDPVVQGLENLPQEGDRPVVFVMNHQSMVDVALSFFLD--RRFAFVSKAITFLLPGAGTLMRLCHFVPLKRGNKASILRMFEKCAQAMESDCNIVIFPQGTRKRHEWVPFKDGAFSFAVDNNYTVVPVTLALPADLW 264
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: W4G7D7_9STRA (PlsC domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7D7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 7.230e-43
Identity = 104/246 (42.28%), Postives = 147/246 (59.76%), Query Frame = 2 
Query:  548 YLQELKSYAGRVSFLKMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLF-FNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALP 1282
            Y +E K +A  ++  K++ F L W+  S     + +P  L+          H    V+ + +  +     +VEG  N  PD E  M+ V+NHQT +DI   YF+G    FSWVSKS +F IPG G LMK+A YV L R +KTSV+RMFE  +   A+GWSV++FPQGTRRR + L FKDGAF LAI ++  V+P TI +P+DL+ +N + + K+++ KPI   D   ++   L+Q  FDVV G LP
Sbjct:   22 YYEEKKHFAN-IAHGKILLFGLFWVLVSALQFALVLPLKLVLAPNELHIVAHETCQVVARSLHVLFFGPVVVEGRPNANPD-EVYMI-VANHQTMMDITSLYFLG--GNFSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELARDRFANGWSVVVFPQGTRRRTEFLPFKDGAFDLAIGAKVRVLPVTIIIPDDLWTWNRLGKVKLVIGKPIAIEDGMTRE--QLKQKAFDVVLGNLP 260
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A024U0I6_9STRA (PlsC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0I6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.300e-42
Identity = 98/231 (42.42%), Postives = 138/231 (59.74%), Query Frame = 2 
Query:  593 KMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVAARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLF-FNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALP 1282
            K++ F L W+  S    ++ +P   +          H    V+ + +  +     +VEG  N+ PD  K  + V+NHQT +DI   YF+G    FSWVSKS +F IPG G LMK+A YV L R +KTSV+RMFE  K   A GWSV++FPQGTRRR + L FKDGAF LA+D+   ++P TI +P+DL+ +N + + K+++ KPI  G+   KD   L+Q  +DVV   LP
Sbjct:   36 KILLFGLFWVIVSWIEFMLILPLKFVVAPNELHIVAHETCMVVARTLHVLFFGPVVVEGRMNVNPD--KVYMIVANHQTMMDITSLYFLG--GNFSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELAKDRFAHGWSVVVFPQGTRRRTEFLPFKDGAFDLAVDANVEILPVTIIIPDDLWTWNRLGKVKLVIGKPIAVGNAT-KD--ELKQKAYDVVLSNLP 259
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A485LJH2_9STRA (Aste57867_21395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJH2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.190e-35
Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 2 
Query:  758 IVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLF-FNSMQRSKIIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALP 1282
            +VEG E++ P+ E  M+ V+NHQT +DI   Y +     FSWVSKS++F +PG G +MK+A YV L R  K SV++MFE  K    +GWSV IFPQGTR+R + L FKDGAF LA+ +   V+P T+ +P+DL+ +    + K+IVHKP+  G  +    + L+Q   DV+  ++P
Sbjct:   91 VVEGKEHMNPN-EVYMI-VANHQTMMDITALYHLD--GNFSWVSKSSIFLLPGAGWIMKLANYVPLTRKSKDSVLKMFEAAKDRFHNGWSVCIFPQGTRQRGEFLPFKDGAFDLAVTANVRVLPVTVIIPDDLWAWTRPGKVKLIVHKPLEKGLTK----AELKQQSHDVIAASMP 258
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A7R9U941_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U941_9STRA)

HSP 1 Score: 143 bits (360), Expect = 7.150e-34
Identity = 87/251 (34.66%), Postives = 140/251 (55.78%), Query Frame = 2 
Query:  482 VWGCITLWLLTSCYFMLFALAMYLQELKSYAGRVSFLKMMAFALTWMYGSL-FCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVAARPIVEGLENLPPDGEKGM----VYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLFFNSMQRSKIIVHKPIHPGDP 1219
            V G +   LL+S Y       + LQE   +  R + LK+MAF LTW   SL + +++ +  ++ G         H     + K +  +     ++EG E++P +  KG     +   NH + +D+ +   +     F+WV+KS+VF +PG+G L+ +A  V L RG K+S ++M E C++ L  GWSV+I+PQGTR R K L +K GAF+L+I+ Q  ++P +I LP+D + N   +  + VH PIHP +P
Sbjct:   11 VGGVVATILLSSAY------VINLQEKPQFLRR-NRLKIMAFGLTWQCLSLIYAAVLLLTSVIRGREWLRVAASHSAAEGISKLLCTVFFGEVVLEGTEHIPKNSMKGQAQPAIVAPNHSSMVDVLLCAMLP--GDFTWVAKSSVFILPGIGQLLWMAGTVPLVRGKKSSALQMLEGCRKALDDGWSVLIYPQGTRNRRKWLPWKYGAFKLSIEKQVPIIPVSIVLPDDTWTNLECKLIVKVHPPIHPPEP 252
[Close]
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Match: A0A7S0FSA7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSA7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.730e-30
Identity = 86/265 (32.45%), Postives = 147/265 (55.47%), Query Frame = 2 
Query:  590 LKMMAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRI----VAARPIVEGLENLPPD----GEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKSTVFWIPGVGLLMKIARYVALKRGDKT--SVIRMFEDCKQLLASGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLP----EDLFFNSMQ----RSK----IIVHKPIHPGDPEFKDVSTLRQHCFDVVTGALPYARGMLERQAKE 1318
            +K+  F + W   +   SL+ +P  LLG    + E++ +  CV+ +   R+    +A   +V G E+LPPD    G+   VYV+NH + ID+   Y++   R+F W++K +V ++PGVG +M ++ +V +KR  K   S+  ++    + + SG  + +FPQGTRR  + + FKDGAF +AI++++ +VP +ID P     DL+  S+     R+K    + VH+PI        D + L+Q C+D++   LP  R   E++  E
Sbjct:   65 IKVYLFNVIWFTWTFVGSLLLLPLWLLGGCGNSVEKLAH--CVVERHGARVCIAAMAGPVVVRGAEHLPPDVSPPGQPAPVYVANHSSQIDVGAVYYLF--RRFKWIAKQSVIYLPGVGQIMHLSGHVFIKRTGKNKGSISNLYVKSNEAVQSGVPMFLFPQGTRRLAQRMPFKDGAFNIAIENETQIVPISIDNPLGAFNDLYPLSLLWGGGRTKEPIVMTVHRPIQCRKDT--DKAKLKQECYDIIYSVLPDYRTDEEKKRSE 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5053.12300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNW3_9PHAE2.730e-14374.05PlsC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LS64_ECTSI2.180e-8970.751-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A835YS94_9STRA1.200e-6348.78PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2UZR3_9STRA8.600e-4841.44Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y3G5_HETAK3.180e-4538.04Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W4G7D7_9STRA7.230e-4342.28PlsC domain-containing protein n=5 Tax=Aphanomyces... [more]
A0A024U0I6_9STRA1.300e-4242.42PlsC domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A485LJH2_9STRA5.190e-3544.89Aste57867_21395 protein n=1 Tax=Aphanomyces stella... [more]
A0A7R9U941_9STRA7.150e-3434.66Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0FSA7_9STRA1.730e-3032.45Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5053contigH-elongata_contig5053:4666..10582 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.5
Seed ortholog evalue3.9e-78
Seed eggNOG ortholog2880.D8LS64
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655,ko:K13509
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975
KEGG ModuleM00089
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0019637,GO:0022414,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090407,GO:1901576
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG2848@2759
EC2.3.1.51
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Hectar predicted targeting categorysignal anchor
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-12_004670.1
Exons3
Model size3821
Cds size1002
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5053.12300.1prot_H-elongata_contig5053.12300.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5053 5114..8211 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930830.828335-UTR-H-elongata_contig5053:4665..51131622930830.828335-UTR-H-elongata_contig5053:4665..5113Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5053 4666..5113 +
1691679589.0243552-UTR-H-elongata_contig5053:4665..51131691679589.0243552-UTR-H-elongata_contig5053:4665..5113Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5053 4666..5113 +
1622930830.898653-UTR-H-elongata_contig5053:8211..105821622930830.898653-UTR-H-elongata_contig5053:8211..10582Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5053 8212..10582 +
1691679589.0660837-UTR-H-elongata_contig5053:8211..105821691679589.0660837-UTR-H-elongata_contig5053:8211..10582Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5053 8212..10582 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930830.8521135-CDS-H-elongata_contig5053:5113..57881622930830.8521135-CDS-H-elongata_contig5053:5113..5788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 5114..5788 +
1691679589.0347028-CDS-H-elongata_contig5053:5113..57881691679589.0347028-CDS-H-elongata_contig5053:5113..5788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 5114..5788 +
1622930830.8709352-CDS-H-elongata_contig5053:7512..76591622930830.8709352-CDS-H-elongata_contig5053:7512..7659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 7513..7659 +
1691679589.0437074-CDS-H-elongata_contig5053:7512..76591691679589.0437074-CDS-H-elongata_contig5053:7512..7659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 7513..7659 +
1622930830.8842084-CDS-H-elongata_contig5053:8031..82111622930830.8842084-CDS-H-elongata_contig5053:8031..8211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 8032..8211 +
1691679589.0554507-CDS-H-elongata_contig5053:8031..82111691679589.0554507-CDS-H-elongata_contig5053:8031..8211Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5053 8032..8211 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5053.12300.1

>prot_H-elongata_contig5053.12300.1 ID=prot_H-elongata_contig5053.12300.1|Name=mRNA_H-elongata_contig5053.12300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp
MDTVPSEWPGWVWGCITLWLLTSCYFMLFALAMYLQELKSYAGRVSFLKM
MAFALTWMYGSLFCSLITVPDLLLGHRERAAERVHYFGCVMGKFMFRIVA
ARPIVEGLENLPPDGEKGMVYVSNHQTSIDIAIFYFIGVGRKFSWVSKST
VFWIPGVGLLMKIARYVALKRGDKTSVIRMFEDCKQLLASGWSVMIFPQG
TRRRLKVLDFKDGAFQLAIDSQSTVVPFTIDLPEDLFFNSMQRSKIIVHK
PIHPGDPEFKDVSTLRQHCFDVVTGALPYARGMLERQAKEKEAAAAVAAV
AENVTVAGTVEEATEEPEGPTETAVLLEDKKTK*
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mRNA from alignment at H-elongata_contig5053:4666..10582+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5053.12300.1 ID=mRNA_H-elongata_contig5053.12300.1|Name=mRNA_H-elongata_contig5053.12300.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5917bp|location=Sequence derived from alignment at H-elongata_contig5053:4666..10582+ (Himanthalia elongata Himel1 dioecious)
GATTGAACTCTTATGAAACCCACTCTCCCGATGTAATCTAGCACTAGAAG
ACCCGCTTCTCTCGAGCATTCATGGAAAGATTAAATTTCCGTTTGGAAGG
GTAGAGGTACGACAACAATTCTAACACTTAAGGACGTCGCTTCTGTTTGA
GAAATAACGGGACCCTATCTACGATTGGAATCGTCACAGCAACGGTCGAA
CGCGGCCTGAGACGAAAACTTGCCGATCAAATTTTCGATTTTTTCACCTT
CAGAGCTCAGGAGAAATTCGAAACTATATAATCTTGTGCTGACTCCACCT
CTTGTGAGGCCCATCTCGACCTACGGAGCTTTGTCACACTACACAGAGCG
ATTACACGTTTTCGGGCGAAAAAGGCTGAAATACCCGAAGGCGAAGGAGG
GATAGACCCTAACGGGTTTTTGGCAGGTGGAGCAGTCTCAGGGCAGCGAT
GGACACGGTGCCGAGCGAGTGGCCGGGATGGGTCTGGGGGTGTATTACAC
TTTGGCTTCTTACGAGCTGCTACTTCATGTTGTTCGCGCTCGCCATGTAT
CTCCAGGAGCTCAAGTCCTACGCCGGACGAGTGAGCTTCCTGAAGATGAT
GGCCTTTGCCCTGACGTGGATGTACGGTAGCCTGTTCTGCTCCTTGATCA
CAGTGCCTGATCTCTTGCTCGGCCACAGAGAACGGGCAGCGGAGCGAGTG
CACTACTTCGGGTGCGTCATGGGTAAATTTATGTTCCGTATCGTGGCAGC
GCGGCCCATCGTCGAAGGCCTGGAGAACCTCCCACCAGACGGTGAGAAGG
GCATGGTCTATGTATCGAACCACCAGACCTCAATTGATATTGCGATATTC
TACTTCATCGGAGTTGGGCGGAAGTTCTCGTGGGTGTCGAAGAGCACCGT
CTTCTGGATTCCCGGGGTAGGGTTGCTGATGAAGATCGCGAGGTATGTAG
CTCTCAAGAGAGGCGACAAGACCAGCGTGATCAGGATGTTTGAGGACTGC
AAGCAGCTCCTCGCGTCAGGATGGTCCGTCATGATATTCCCTCAGGGTAC
GCGCCGCCGACTGAAGGTCCTCGACTTCAAAGACGGAGCGTTTCAGCTCG
CCATCGACAGCCAAAGCACCGTCGTGAGTGTTCGTAGAGAATGGCGCTTC
CATCTTTTCCCACTAATATCGGTATGCTTCCAAAAGGGTTAGACAAGTCG
ATGTTTTGATGACACGCTCATTTGGGTGATTTGTGATTTAGCTTCGACAG
CGTCACCAACCTTCATGCTGGAGATGATGTCACAGCTTTGCACCCAGTAT
ACTCTTATTAACCTTCATGCCGGAGATGATGTCACAGCTTTGCACCCAGT
TTACTCTTATATCATCCACCTCGGGAGAGGGCTAAATGGGGCTGTGTCTA
GGGAGTAGGAATGGCGGTGTCTCGTTCGGTGCTAATTATTTTAAACCAAG
GGAAAGTGTGAAATCGTGATTAAAAATGTCGGGCCAACTCAACCCAATAT
ACTTGTAGGGGAGACGTAAACAACCGCCCGCAACAATTGTTTTAGTTTCT
GAAAACACTCCGTAGCTCTTTAATATACCTACCATCGTAGGTTCCTACAT
TCCTAACAGAGATCTCGAATCCTTATAGCCATTTTCTATCCTCCAATCCG
AGCCGTAATCGGCGAATACGCAAGGATGTCTGTCATGGGATGTTATCGTA
CTGTAAGGTATTTACACTTAGACTTTCTTTACTGGCCTATATATCCTTTT
TTTTATACAGTATATACTCACTCGCGTGTGACGATTTTGTGCTCAAAGGT
AGTAAGTAATGTACACATTCGAACCAGACGATAGTTGGTCCACCGGATGG
TACATCTCACGGCGCAAAGAAGGGGTGGATATTCGGGGGGTTGGAATGAG
CTCAAGGCTTTAAAAATAATAATGCGAAATTCAAGCAACATTGTTTTGCA
GAAGCACTCGATGAACGTGGGGGGTGATGTGGAGAGCACGCTGGTACTTT
ATGATGAATTTATCCACGAACAGTTTGCCCCGAAACGCGCATGGACGCTT
GGAAGGTTTCCAACTTTGCCCAGGACTTACAGTACCCACATTGCAGACCA
CGAGAAAAAATTGTGAGGCGCCAGGGATGGGGGCAACGGGCGACATACTT
GTTGATTTTGGTACATGGCCCTCTAACGGCCTCTTTTGGGGTATAGGCTC
CTTTTTCGCTATGTACCTAATATCCATTCTGTGAACTACTTTTTTGTGTA
GATTTTACTTTTAAAACTTTGAACTCATTCCAACCCTCCGAATATCCACA
CCTTCTTAGCACCGTGAGAGGTGTAATCCAGGGGACCAACTATCGTCAGG
TTCGAATATGTACATTACTACCTTTGAGCACAAAATCGTCGCAACATGTG
ATTAATCGTGTTCCCCATTAGTAGATTAATCGGGTCAACGGTGTAATGTC
GAGGGTTCCATCATTATCCCGTACACTTAGATAATTCATCATGGGGGGAC
GATGACGTCAAACCAGAGCCTAGAGGGTGTTGGTTAGTATAATAGATGTA
AGTTCATTACTCGTAAACTGTAGAAAAATAATAATAACTTCGTAGTTATC
GTGGTTTTTTAGAAATCTTCCCCATTTGTATCCGGGGCAAACACACCCTT
GATCATCTTACCAGCGTGCTCTCCATACTTTTCAGGGTACATTTTGTTCC
CTCCATGGGCCCAAAATTACGCGACTCCCTCACTTGACCATCTGCGCCAT
GCCTTTTTGAAAAAATGTATTCTTAAAAGCCTCTAATGCCTAGGCGGGGA
AACATGCAACTGAACGGCCTACACGTGGCAATGACAACCACACACAGGTC
CCCTTCACGATAGATCTGCCAGAGGACTTGTTCTTCAACTCGATGCAGCG
GAGCAAGATCATCGTTCACAAGCCCATACACCCGGGAGACCCAGAGTTCA
AGGATGTGTCAACGTTGCGCCAGCACTGCTTTGACGTTGTGACGGTGAGC
GCCGAGAGCTCGAGAAATCGAGACGCTTTCCTACACAAGCATAAAGGTAG
CTCTGTCCTTACGTCTGTCCCTGGGCGGAAGTATCATCGCGTGGTTTATT
CTAAGGCTGCGATGCTTCATGCTGCACAGCATGACCCGTCAGGGCTGTTC
AGTCACGTGTAGCGGACACGGCTGCGGGATTGTGTCCCGTGGACATGGCG
TTTATTTGACGTTCATTGAGAAGGCCGAACTGATATGGTGTCAAACGTGC
TTCGTCGTTTCTGGTTGCTGCCTTGCTTAAGCTGCACCCTACCTTCCTTT
CCTCCGTACGCCTTTTTTTTCTCGTCTTGGACATTGTTTTGCGTTAAAAA
CATCCATACTTCAAAGGGGGCACTTCCTTACGCGAGGGGGATGCTTGAAC
GGCAAGCAAAAGAGAAGGAAGCGGCCGCAGCGGTGGCGGCGGTAGCTGAA
AATGTAACTGTGGCTGGTACCGTCGAGGAAGCGACAGAGGAACCAGAAGG
GCCAACGGAGACAGCCGTACTACTAGAAGACAAGAAGACAAAGTAAATCG
GGCGCCAGGACCGGATTGGACGGCCAACGTTTTTGAGGGACAGTAGGAGG
AGTGGAAGCGTTAAGAGCACAACATGTCTGTATTTGGCGTTACCGGGGGA
TCCAGTGCTTTAATCACGTCGTCGAGAAGGGCATATGTCAGTGCTTCGTC
GCTGTGCGATTGGCGGACAAAAGGGATGATATCCCTACTGTGATTACGAT
CGATCGATCTTCACGGTTGGTTTTGTGCAAGCGTTGATCCCTAAAACGGC
TATAAGACACCCGTGGGGCTCGAACAGGTGGGCAAGGCCACTGGCTTCCT
CAGGTTGCTGTATTTATCAAAACCATTCTTATGTTTGGACATTCCCATCT
TCGCAGTTGATAATATCTATCGGAGAAGGCGAGTCCTTGGCGTGCGAGCG
ACTGTCAATTATCGCTTCTATCCTTTCGATGACATGATTGAAACAACGAT
AGTCTCCTGCCACCGTAAACTCGGGTAGAGCGAAGGACATGGGAGTGGTG
GTTTGGGTTAGTTGCATTCCAGAAGTGTCCCGCCGTTGCCTTGAAAAGTT
GTTTTGGATTTGACGTTACCGGAGGTAGCGTGCATGTGTCTGCCCAAGAG
CGGCAGTCTCGGGATCAAAGGGTCTTTCTCTGGCTCTCTAGCGGCTGCTG
TTGGTGTTCTGAGGTCACACACGAATGCCCGACGTGTCTTAGCGCATCAA
GATCTTCTCGCTCGGAAGGCTAGAATTTTTGCGTCGTGTCTTGGAAATAG
AGACCTCCCAGGCAGCGCTCGGACGGTAGACGGTGTTTAGGCTCTTATTG
AGCACGTGGTGCACTTTTGTGTCGTTTCCTTCACCGCCGAGAACCCGCGC
AGCATTTTTTCATACGTTGATTGGTTGTTGAGTAGAGTTTGTGTCTTGTC
TTGCCTTGAGTGTTTTTGTTGTAGATCTTGTTTTAAGTGTTCCAACTTTT
GAATCTTGGCTTATTCTGGGAAAAGAGAAAACTGCGCTGAAATAATTTCT
CCGGGCGTTCGCGGCCATCGATGCCCGCGGGCCTGCTCGAGGTTGTAGAG
TACCGATAGCGCCACTCATTTTAGAGTCCCTCCGGCCTTCTGTCGTGGCA
GGCGTGATCAAAACGAGTTTTGGGTCATTTGTGGAGTTTGTGCGTTTAAT
CAATGGCGAGGCGTAGCAAGTGCGGTACAAGCTGGGATAATGGGCAGGAA
AAGAGTGGCGCAGTATAGCACGCAGGGAGCCGTTGGCTTTTCTCGTGAAC
CGTGGTTCAGAATAACAGACCAGAAGAAATCTTAACCCTGTTGACACTGT
GAATTCATATGTTGTTAATGCCTGTGTGCTCTTTCGCGACAAATTAGTTT
TTGTACTCTCGACGCCCCCTCTTGTGTACCGTGTCGGTCGTTGAAGAAAT
GAAAAATGAGGCTCAGCGAAAAGAGAGATGGGTGAGGGCCTAAGGCGCTC
GGGAGTACGTATCATCGACGAATCGTTCTGGGGAAATTGAAATTATGGAG
CTGCATGCCACGTGGTTTTGTTTCCTAGCGCCGTGCCACTCTTATCCTCC
CACCAGCACGCTCTCCAATCACAGTTTCAATATCCCCGTTCGAGAGTCCT
TGCGTGGCGACTGAGGCGTTATCGGCGCTTCAGTAAAGTCGTAACATGTA
TAGTATATTCGCACACACGCGCAAGTTTGCGCGGGGGGGTTATCAATAGT
GTGACAGCCGGTAGCGGTCATGCGTCGCCTTCTCACAGTGCGTACATAGT
GCTTTTGAGTTGAGTTTTTATGTAGACGTGGGTGCGTGTTTTTAAGTGTA
AGAAGGAAATAAATGAGGTGTATCGGCGAAAGGCTTGTGCAGTATATGGG
AGGGGTGTCATGTTTATATCAGTAGAATGGCTTTGTGGGGAGTAAGTGGG
GAGGCAACTCGCGTCTATTCGTCCATGCGGCCGAGGAAAGAGGAAATATA
AGCTCGCTTTTCTTGTCAGATGAAATAACCGCTGTTTGTTTGTTTTTTTA
CATGTAGCAAGGGGAGAGCTGCGATGTGTTTTGTCCTTGGATCCTTGGCC
CCGAAATAGTACCTTGTACCTTCATTCACCCTATATATTATGTATAGTAG
AGATTCAAGAATATATTTTTGGCTTTCCCCATCCCTACGAGGGAACTATT
ACTTAGCACCGCATATCATACCACGATTTTATTGTATGGTTTTGAAAACG
TTTGGGATTTATATGATTCAGATTTCTGAAGGTCGCGAGCAAGAACGTTC
GAAGCATTAAAAAGAAACCACGTTGAAGCGTGAGGGAGACACGTTAAAGC
GTGAGGGAGAGCACCTACTTCCACCATGTTACTTATTACTTACCCCCGTC
TCCGACACCGTCCTTTA
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Coding sequence (CDS) from alignment at H-elongata_contig5053:4666..10582+

>mRNA_H-elongata_contig5053.12300.1 ID=mRNA_H-elongata_contig5053.12300.1|Name=mRNA_H-elongata_contig5053.12300.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at H-elongata_contig5053:4666..10582+ (Himanthalia elongata Himel1 dioecious)
ATGGACACGGTGCCGAGCGAGTGGCCGGGATGGGTCTGGGGGTGTATTAC
ACTTTGGCTTCTTACGAGCTGCTACTTCATGTTGTTCGCGCTCGCCATGT
ATCTCCAGGAGCTCAAGTCCTACGCCGGACGAGTGAGCTTCCTGAAGATG
ATGGCCTTTGCCCTGACGTGGATGTACGGTAGCCTGTTCTGCTCCTTGAT
CACAGTGCCTGATCTCTTGCTCGGCCACAGAGAACGGGCAGCGGAGCGAG
TGCACTACTTCGGGTGCGTCATGGGTAAATTTATGTTCCGTATCGTGGCA
GCGCGGCCCATCGTCGAAGGCCTGGAGAACCTCCCACCAGACGGTGAGAA
GGGCATGGTCTATGTATCGAACCACCAGACCTCAATTGATATTGCGATAT
TCTACTTCATCGGAGTTGGGCGGAAGTTCTCGTGGGTGTCGAAGAGCACC
GTCTTCTGGATTCCCGGGGTAGGGTTGCTGATGAAGATCGCGAGGTATGT
AGCTCTCAAGAGAGGCGACAAGACCAGCGTGATCAGGATGTTTGAGGACT
GCAAGCAGCTCCTCGCGTCAGGATGGTCCGTCATGATATTCCCTCAGGGT
ACGCGCCGCCGACTGAAGGTCCTCGACTTCAAAGACGGAGCGTTTCAGCT
CGCCATCGACAGCCAAAGCACCGTCATGGACACGGTGCCGAGCGAGTGGC
CGGGATGGGTCTGGGGGTGTATTACACTTTGGCTTCTTACGAGCTGCTAC
TTCATGTTGTTCGCGCTCGCCATGTATCTCCAGGAGCTCAAGTCCTACGC
CGGACGAGTGAGCTTCCTGAAGATGATGGCCTTTGCCCTGACGTGGATGT
ACGGTAGCCTGTTCTGCTCCTTGATCACAGTGCCTGATCTCTTGCTCGGC
CACAGAGAACGGGCAGCGGAGCGAGTGCACTACTTCGGGTGCGTCATGGG
TAAATTTATGTTCCGTATCGTGGCAGCGCGGCCCATCGTCGAAGGCCTGG
AGAACCTCCCACCAGACGGTGAGAAGGGCATGGTCTATGTATCGAACCAC
CAGACCTCAATTGATATTGCGATATTCTACTTCATCGGAGTTGGGCGGAA
GTTCTCGTGGGTGTCGAAGAGCACCGTCTTCTGGATTCCCGGGGTAGGGT
TGCTGATGAAGATCGCGAGGTATGTAGCTCTCAAGAGAGGCGACAAGACC
AGCGTGATCAGGATGTTTGAGGACTGCAAGCAGCTCCTCGCGTCAGGATG
GTCCGTCATGATATTCCCTCAGGGTACGCGCCGCCGACTGAAGGTCCTCG
ACTTCAAAGACGGAGCGTTTCAGCTCGCCATCGACAGCCAAAGCACCGTC
GTCCCCTTCACGATAGATCTGCCAGAGGACTTGTTCTTCAACTCGATGCA
GCGGAGCAAGATCATCGTTCACAAGCCCATACACCCGGGAGACCCAGAGT
TCAAGGATGTGTCAACGTTGCGCCAGCACTGCTTTGACGTTGTGACGGTC
CCCTTCACGATAGATCTGCCAGAGGACTTGTTCTTCAACTCGATGCAGCG
GAGCAAGATCATCGTTCACAAGCCCATACACCCGGGAGACCCAGAGTTCA
AGGATGTGTCAACGTTGCGCCAGCACTGCTTTGACGTTGTGACGGGGGCA
CTTCCTTACGCGAGGGGGATGCTTGAACGGCAAGCAAAAGAGAAGGAAGC
GGCCGCAGCGGTGGCGGCGGTAGCTGAAAATGTAACTGTGGCTGGTACCG
TCGAGGAAGCGACAGAGGAACCAGAAGGGCCAACGGAGACAGCCGTACTA
CTAGAAGACAAGAAGACAAAGTAAGGGGCACTTCCTTACGCGAGGGGGAT
GCTTGAACGGCAAGCAAAAGAGAAGGAAGCGGCCGCAGCGGTGGCGGCGG
TAGCTGAAAATGTAACTGTGGCTGGTACCGTCGAGGAAGCGACAGAGGAA
CCAGAAGGGCCAACGGAGACAGCCGTACTACTAGAAGACAAGAAGACAAA
GTAA
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