mRNA_H-elongata_contig50496.12294.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50496.12294.1
Unique NamemRNA_H-elongata_contig50496.12294.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A6H5KC29_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC29_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.510e-162
Identity = 232/302 (76.82%), Postives = 258/302 (85.43%), Query Frame = 1
Query:    1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARRP 906
            +ASFH GFL W YASRLLA   +FL+++Y+NALATMV+THRNPYAM+LD SGEPL +HTLPDLGHDLWA  L RLG+HTDYIDEHALPDRMV FAG V   FILCHP RLKI+RRVF IFGTVL++RAVSVSVTVLPDASPVCRER EE  AI+ LFP AF EAA F WSPTSFVTCGDMVFSGHTTCLLMVAMTF +YCRA  LQTKV+ RGFHLSE +LSAVRR VYAYV +G LVIIGSKLHYTLDVLLA L+  C FS YHDWA HDLLRK  R+++WLES++VRE D LAYT+A+RP
Sbjct:  181 RASFHRGFLCWNYASRLLAAGFFFLLAVYLNALATMVATHRNPYAMLLDRSGEPLGAHTLPDLGHDLWALLLNRLGHHTDYIDEHALPDRMVSFAGMVGDLFILCHPQRLKIMRRVFIIFGTVLMMRAVSVSVTVLPDASPVCRERFEEDAAIAELFPGAFFEAARFVWSPTSFVTCGDMVFSGHTTCLLMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVTLGALVIIGSKLHYTLDVLLAVLVTFCTFSFYHDWALHDLLRKNVRVMEWLESDEVREQDLLAYTMAKRP 482          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: D7FZR1_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR1_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 7.410e-137
Identity = 202/256 (78.91%), Postives = 221/256 (86.33%), Query Frame = 1
Query:    1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALI 768
            +ASFH GFL W YASRLLA   +FLV++Y+NALATMV+THRNPYAM+LD SGEPL +HTLPDLGHDLWA  L RLG+HTDYIDEHALPDRMV FAG V   FILCHP RLKI+RRVF IFGTVL++RAVSVSVTVLPDASPVCRER EE  AI+ LFP AF EAA F WSPTSFVTCGDMVFSGHTTCL+MVAMTF +YCRA  LQTKV+ RGFHLSE +LSAVRR VYAYV +G LVIIGSKLHYTLDVLLA L+
Sbjct:  175 RASFHRGFLCWTYASRLLAAGFFFLVAVYLNALATMVATHRNPYAMLLDRSGEPLGAHTLPDLGHDLWALLLNRLGHHTDYIDEHALPDRMVSFAGMVGDLFILCHPQRLKIMRRVFIIFGTVLMMRAVSVSVTVLPDASPVCRERFEEDAAIAELFPGAFLEAARFVWSPTSFVTCGDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVALGALVIIGSKLHYTLDVLLAVLV 430          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A835YVL2_9STRA (PAP2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL2_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.320e-108
Identity = 174/304 (57.24%), Postives = 212/304 (69.74%), Query Frame = 1
Query:    1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAI---SSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            +A F  GFL   Y SRLL   ++FLV  Y+NA+ATMVS+HRNPY  +LD  G  L +HT+PDLGHDLWA  LTRLG+HTD+IDEH+LPDR+V   G+V F  I+ HP R     RV  IFG +LL+RAVSVSVTVLPDASPVC  +            LFP  FA AA F   PTS +TCGDM+FSGHTTCL+M A+ F +Y RAKHLQTKV+FRG  +SE  L+ +R  VYAYV  GCLVIIGSKLHY++DVL A  +    F  YH+WAR    R++ R+++WLE + VR LD+ AY  ARR
Sbjct:  153 RACFSRGFLSHQYLSRLLFSVAFFLVCAYLNAIATMVSSHRNPYIRLLDLHGNLLPTHTMPDLGHDLWAVVLTRLGHHTDFIDEHSLPDRLVSALGRVTFFLIIAHPRR-----RVSMIFGALLLMRAVSVSVTVLPDASPVCHAQFTSAAGAYKHQPLFPAVFARAARFVLDPTSTITCGDMMFSGHTTCLMMFALVFRQYLRAKHLQTKVLFRGA-VSERFLAPIRHAVYAYVACGCLVIIGSKLHYSIDVLYAIGLSFFTFRTYHEWARTAQSRRRNRLLQWLEDDTVRGLDDAAYARARR 450          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A8K1C3K0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3K0_PYTOL)

HSP 1 Score: 194 bits (492), Expect = 2.020e-55
Identity = 121/296 (40.88%), Postives = 164/296 (55.41%), Query Frame = 1
Query:   25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEE-RGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            L +AY SRL    + F ++ Y+NALA +++  R P+ ++L    +   S TLPDLGHDL+ + + +    T YI+   LPD  +   G VV   ++ HP RL I+RR   IF  + L+RA  V+VT LPDASP+C  + E  +G   S+  FP+AF  A      P+  +TCGDMVFSGH   L++ AM    YC    L T    R  ++    L  VR  VYA    G   I+G++LHYTLDVL+A  I T  +  YH    H   R  FRI+ WLE E+V  +D  AY  ARR
Sbjct:  105 LSFAYLSRLGVSLAIFAIASYLNALAAVIAGWRTPHVVILTLDNQDSGSKTLPDLGHDLFKYVMGKFYGQTTYIEWFDLPDEFIGAVGTVVGVLLVLHPRRLLILRRFCAIFACINLMRACCVAVTSLPDASPMCISQFENGKGVYKSMPMFPKAFVRAWKVLTRPSQHITCGDMVFSGHCVFLMLCAMIVKTYCVRAELNTPFTRRYSYV----LWMVRYYVYAAAFGGIFAIVGTRLHYTLDVLIAMYITTQVWFTYHWLCMHP--RMSFRILNWLEHEEVHFIDMDAYRKARR 394          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: K3XC87_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC87_GLOUD)

HSP 1 Score: 188 bits (477), Expect = 3.530e-53
Identity = 118/297 (39.73%), Postives = 160/297 (53.87%), Query Frame = 1
Query:   25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERL--EERGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            L +AY SR     + F ++ Y+NALA  ++  R P  ++L+   +     TLPDLGHDL+ F +T++   T YI+   LPD  +   G VV   ++ HP RL I+RR   IF  + L+RA  V+VT LPDASP+C  +   E RG   SL  FP+AF  A      P+  +TCGDMVFSGHT   ++  M    YC    L T    R  ++    L  VR  VY     G   I+G++LHYTLDVL+A  I    +  YH    H   +  FR++ WLE E+V  +D  AY  ARR
Sbjct:  105 LSYAYLSRFAFSLAIFAIASYLNALAAAIAGWRTPNVVILNLDKQNSGLKTLPDLGHDLFKFVMTKIYGQTAYIEWFDLPDEFLAAVGTVVGILLIVHPRRLLILRRFCAIFACINLMRACCVAVTSLPDASPMCISQFDSEVRGLYKSLPIFPKAFGRAWKVLVRPSQHITCGDMVFSGHTVFFMLCCMIVKTYCVKSELNTPFTRRYSYV----LWMVRYYVYTGAAFGIFAIVGTRLHYTLDVLIAVYITAQVWFTYHWLCAHP--KSSFRVLNWLEHEEVHFIDLDAYRKARR 395          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A2D4BK11_PYTIN (PAP2_C domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK11_PYTIN)

HSP 1 Score: 188 bits (478), Expect = 4.280e-53
Identity = 117/294 (39.80%), Postives = 165/294 (56.12%), Query Frame = 1
Query:   13 HPGF----LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEE-RGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAM---TFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDV 864
            H GF    L WAY SRL    + F ++ Y+NALA++++  R P  ++L+ + +     TLPDLGHDL+ F +T++  HT  ++   LPD  +   G VV   ++ HP RL I+RR   IF  + L+RA  V+ T LPDASP+C  + E  +G   S+  FP+AF  A      P+  +TCGDM+FSGH+  L++ AM   T   YC    L T    R       +L  +R  VYA    G   IIG++LHYTLDVL+A  I T  +  YH  + +   R  FR++KWLE +DV
Sbjct:   96 HQGFIAEMLSWAYLSRLAFSVAIFALASYLNALASVIAGWRTPNVVILNLNKQDTGEKTLPDLGHDLFKFVMTKIYGHTTNLEWFXLPDEFIGTVGSVVGLLLVVHPRRLLILRRFCAIFACINLMRACCVTATSLPDASPLCISQFESGKGLYKSMPMFPKAFFRAFKVLTRPSQHITCGDMIFSGHSVFLMLCAMIVRTVXVYCVESELNTPFTRR----FPYVLWMLRYFVYAGAAGGIFAIIGTRLHYTLDVLIAMYITTQVWLTYHWLSANP--RSSFRVIKWLEHDDV 383          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A3F2RRE6_9STRA (PAP2_C domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRE6_9STRA)

HSP 1 Score: 187 bits (474), Expect = 5.930e-53
Identity = 114/296 (38.51%), Postives = 162/296 (54.73%), Query Frame = 1
Query:   25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLE-ERGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            L +AY SRL    S F ++ Y+N LA +++  R P  ++L  + E  ++ TLPDLGHDL+ F +T++   T YI+   LPD  +   G      ++ HP RL I+RR   IF  + L+RA  V+VT LPDASP+C  + + ERG   S+  FP+AF  A      P+  +TCGDM+FSGH   L++  M    YC    L T    R       +L  +R  +YA    G   I+G++LHYTLDVL+A  I    +  YH    H   ++ F ++ WLE E+V  +D  AY  ARR
Sbjct:   90 LSYAYLSRLAFSLSIFAIASYLNTLAAVIAGWRTPNVVILSLTKESTSAKTLPDLGHDLFKFVMTKIYGQTTYIEWFDLPDEFLAAVGMTTTLILILHPRRLLILRRFCFIFAIINLMRACCVAVTSLPDASPMCISQFDSERGDYKSMPIFPKAFFRAWKVLIRPSQHITCGDMIFSGHAVFLMLCVMFARTYCVRSELNTPFTRR----FPCVLWMIRYYIYAGSAFGAFAIVGTRLHYTLDVLIAIYITAQVWFTYHWLTTHP--QESFALLNWLEHEEVHFIDHNAYRKARR 379          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A5D6Y6V8_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6V8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 6.570e-52
Identity = 118/293 (40.27%), Postives = 164/293 (55.97%), Query Frame = 1
Query:   34 AYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERL---EERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            AY SRL       LV+ Y+NALA +++  R P  ++LD + E     TLPD+GHD + +  TR+ +    I    LPD+ +   G +V   ++ HP RL I+RR   IF  + L+RA+ V+ T LPDASP+C  +    + R     +FP AFA A      P   +TCGDMVFSGHT   ++ AMT   YC    L T    R       +L  VR TVYA V +G  +I+G++LHYTLDVL+A  + T  + +YH W   +  R  F +++WLE +DVR +D  AY  ARR
Sbjct:  101 AYLSRLAFAVLTMLVTSYLNALAAVIAGWRTPNIIILDLNNEDSGEKTLPDIGHDTFKYVATRI-FGRFVITWFHLPDQFLGAVGALVVLLLVFHPRRLLILRRFCAIFACINLMRAMCVAATSLPDASPMCIAQFGSADGRYKARPIFPAAFARALKVLLRPADHITCGDMVFSGHTVFFMLCAMTVKWYCIKAELNTPFTRR----YPFVLWLVRYTVYAGVALGIFMIVGTRLHYTLDVLVAIYVTTQVWFMYH-WLLSNP-RPGFGVLQWLEHDDVRFIDSDAYRQARR 386          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A813EHY7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EHY7_POLGL)

HSP 1 Score: 184 bits (466), Expect = 1.390e-51
Identity = 115/314 (36.62%), Postives = 170/314 (54.14%), Query Frame = 1
Query:    1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYH----TDYIDEHA--LPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEER-GAISS--LFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIF---------RGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRI--------VKWLESEDV 864
            +A F   FL   Y  RL     +FL++ YVN+LA++++ +R P+ ++ D  G  L + TLPD+GHDL +  +T LG+     T +++ +   +PD +V F       FI  HP R +I+RRV  I   V LLRA+ V VT LPDA P C+ +     G+     +FP AF  A    W P   +TCGDMVFSGHT+ L+  AM    YCR + L    +F           F L+E   + VR     Y  +  ++II ++LHYTLDV LA  + + +F  YHD A ++ L+++  I        ++WLE+E+V
Sbjct:   59 RAGFTFHFLSREYLQRLAFAVVFFLIAAYVNSLASVIAGYRTPWVVVKDLDGNLLDTSTLPDIGHDLSSALVTSLGFEVHEVTKWLEVNGSLIPDALVHFMVACTGIFIFAHPKRFQIIRRVLMILAFVFLLRALCVFVTQLPDAHPKCQAQFTSATGSYKRRPMFPHAFYRAWLVLWHPDKHITCGDMVFSGHTSVLMQCAMVVWHYCRLEELPGGPVFTKPMQILTCNRFALTERFCTLVRAATILYTAIAAILIIATRLHYTLDVALAVYLNSRSFRWYHDAASYEKLKRRKSIFLLGYGSVMQWLEAEEV 372          
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A5D6Y591_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y591_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.980e-51
Identity = 113/293 (38.57%), Postives = 157/293 (53.58%), Query Frame = 1
Query:   25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
            L +AY SR     + F ++ Y+NALA +++  R P  ++LD + +     TLPDLGHDL+ + +T++   T YI+   LPD  +   G  +   ++ HP RL I+RR   IF  + ++RA  V+VT LPDASP C         IS  F RA+         P+  +TCGDMVFSGHT   ++ AMT   YC    L T    R       +L  VR  VY  V  G   I+G++LHYTLDVL+A  I    ++ YH    H   +  FR++ WLE E+V  +D  AY  ARR
Sbjct:  105 LSYAYLSRFAFSLTIFAIASYLNALAAVIAGWRTPNVVILDLNKQDTGEKTLPDLGHDLFKYVMTKIYGQTTYIEWFDLPDEFLAAVGTCIGILLIVHPRRLLILRRFCAIFACINMMRAFCVAVTSLPDASPNC---------ISQAFDRAWKVLV----RPSQHITCGDMVFSGHTVFFMLCAMTVKTYCVKSELNTPFTRR----FPYVLWMVRYYVYTGVAFGVFAIVGTRLHYTLDVLIAVYITAQVWATYHWLCAHP--KSSFRVLNWLEHEEVHFIDLDAYRKARR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC29_9PHAE1.510e-16276.82PAP2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FZR1_ECTSI7.410e-13778.91PAP2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YVL2_9STRA1.320e-10857.24PAP2_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A8K1C3K0_PYTOL2.020e-5540.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3XC87_GLOUD3.530e-5339.73PAP2_C domain-containing protein n=1 Tax=Globispor... [more]
A0A2D4BK11_PYTIN4.280e-5339.80PAP2_C domain-containing protein n=2 Tax=Pythium i... [more]
A0A3F2RRE6_9STRA5.930e-5338.51PAP2_C domain-containing protein n=2 Tax=Phytophth... [more]
A0A5D6Y6V8_9STRA6.570e-5240.27PAP2_C domain-containing protein n=1 Tax=Pythium b... [more]
A0A813EHY7_POLGL1.390e-5136.62Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A5D6Y591_9STRA2.980e-5138.57PAP2_C domain-containing protein n=1 Tax=Pythium b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50496contigH-elongata_contig50496:420..3851 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.7
Seed ortholog evalue2.9e-109
Seed eggNOG ortholog2880.D7FZR1
KEGG rclassRC00017
KEGG koko:K04714
KEGG ReactionR08969
KEGG Pathwayko00600,ko01100,ko04071,map00600,map01100,map04071
EggNOG free text desc.sphingomyelin synthase activity
EggNOG OGsKOG3058@1,KOG3058@2759
Ec32 ortholog descriptionSphingomyelin synthase-like domain
Ec32 orthologEc-21_004030.1
EC2.7.8.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons5
Model size909
Cds size909
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50496.12294.1prot_H-elongata_contig50496.12294.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50496 420..3851 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930830.2876058-CDS-H-elongata_contig50496:419..6401622930830.2876058-CDS-H-elongata_contig50496:419..640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 420..640 +
1691679588.8052108-CDS-H-elongata_contig50496:419..6401691679588.8052108-CDS-H-elongata_contig50496:419..640Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 420..640 +
1622930830.3040547-CDS-H-elongata_contig50496:1271..14941622930830.3040547-CDS-H-elongata_contig50496:1271..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 1272..1494 +
1691679588.819672-CDS-H-elongata_contig50496:1271..14941691679588.819672-CDS-H-elongata_contig50496:1271..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 1272..1494 +
1622930830.3179057-CDS-H-elongata_contig50496:1951..20371622930830.3179057-CDS-H-elongata_contig50496:1951..2037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 1952..2037 +
1691679588.8294919-CDS-H-elongata_contig50496:1951..20371691679588.8294919-CDS-H-elongata_contig50496:1951..2037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 1952..2037 +
1622930830.3343437-CDS-H-elongata_contig50496:2672..29181622930830.3343437-CDS-H-elongata_contig50496:2672..2918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 2673..2918 +
1691679588.8393931-CDS-H-elongata_contig50496:2672..29181691679588.8393931-CDS-H-elongata_contig50496:2672..2918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 2673..2918 +
1622930830.3481154-CDS-H-elongata_contig50496:3718..38511622930830.3481154-CDS-H-elongata_contig50496:3718..3851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 3719..3851 +
1691679588.8495634-CDS-H-elongata_contig50496:3718..38511691679588.8495634-CDS-H-elongata_contig50496:3718..3851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50496 3719..3851 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50496.12294.1

>prot_H-elongata_contig50496.12294.1 ID=prot_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp
QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDH
SGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVF
PFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEER
GAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYC
RAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDV
LLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLAR
RP*
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mRNA from alignment at H-elongata_contig50496:420..3851+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50496.12294.1 ID=mRNA_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3432bp|location=Sequence derived from alignment at H-elongata_contig50496:420..3851+ (Himanthalia elongata Himel1 dioecious)
CAGGCCTCGTTCCACCCGGGCTTCCTGCGCTGGGCGTACGCGTCGCGCCT CCTCGCCGTGGCCTCGTACTTCTTGGTGTCAATGTACGTTAACGCCCTTG CCACCATGGTGTCCACCCACCGCAACCCCTACGCCATGATGCTCGACCAC TCCGGGGAGCCGCTGGCCTCGCACACGCTGCCGGACCTCGGTCACGACCT GTGGGCCTTCTGCCTCACAAGGTGCGGCTTTCTTCTTTTAGGGGTGCGCT AGATTTTGATTTTTTTCAGGTTTTTAGGTCTAGAGGTTTTCACTCTCGGA TGGAAGGGGAGGTCATTTCCGATCGGTTGGAGGGGGAGGGGAGGGGAGAG GTGGTCTACCGAAAGAAAATGTACTATGTCCAGTGATGTTTTCTCCCCCC CCTCGTAAATGGCATTTATTGTTTTGGCGTAGGACTACAGAATGTCATTG GCGATTCGATTTTGGATAAAAGCGACGACCCCGACGATTGTTTTGAACGA AATTGAGTAGAAGTGGTGTCATCGTCAATGATGTTGCTGAATGGGTGGTC GTAGCGACTTACAGACAAAAACAGCCGAGCCTCGCCTCCGGAGCTCGTGT GACGCGCGCGCGCGTCTTTGCGATGATGTCTGCGCCTCCCAAACACACCT GCCCTCGCTGCGGCGGCTGGGCGTTTCGTGGCCTGGTCTGGTCTCTGCCT CCATCCAGAGAGAGGAGCCCTTCGCATACGACCTTACCTGGCCGCATTCA CGACACGACACACAGAAGTAGCAGGAGGTTTTCCATCCTCATACATCATC TTCCCCTTTTGTTTGCTTTTCGCTGGTCCGGTGTCCGGTGGCGTTGGGCC AGGCTGGGGTACCACACGGACTACATCGACGAGCACGCCCTTCCTGATCG CATGGTGAAGTTCGCGGGCAAGGTGGTGTTCCCGTTTATTCTGTGCCACC CTCACCGGCTGAAGATCGTCCGGAGAGTCTTCACGATCTTCGGTACGGTG CTACTCCTGAGGGCGGTGTCTGTTTCCGTGACGGTGCTGCCAGACGCGTC TCCCGTTTGCCGAGAGAGACTGGAGGTGCGGAGAGCATGAGTAGGCAAAT CGCGTGAGCAAAAAAACAAAGCAAAAAATAATTTTATTTCTCCTTACATC CCCCCCGCCCCCCCTCCTTTTCCTTTCTTCCGCGTTTTGAGCGTTTTGTC TCTTTTCGTCTCCGTTGTCGGGTTTGTTTGTTTTTTTGCGAGGTCGGGGT CGATGAGGGTTCGCTAGCTTTGCTAAAAAGAACCCAAAATTCGTTCTCCT TGTTGGTAATCTTAGGCAATTTCATGCGAGAGAGAGATAGGAAAAGACGG GACGAAATGACTTCCAGGGATTGAATCGAGATCGTGGATAAAGACGGCAA GTTGCCTCCGAACCTCTCCCTCCGCCCCCCCCCCCAAAAAAGCAATTTTT CGCACATATTCTGCCCTTACCTTGACGTGGATGCCCTTATTTCTTCTTGT GTATCTAACCACCCGCCCTGTGGTGCCCGCAGGAGCGCGGTGCGATCTCG AGCCTTTTCCCCCGGGCGTTCGCTGAGGCGGCATATTTCACATGGTCGCC GACCAGTTTCGTCACTTGGTGAGGGACCGCGTTTCCCCCCCCTCAAATGC GCTGAAGGCGTTTCCCGGTCGGGGACGGGGGAGGCACTGTACGCAAGAAC CTAATCGGTGGCATCAGTGTAGCTGGTAGTGCTACGGTTATGGTCGCGGT CGAGAGAGAGGGACGGGGAGAGAGCGTCGTTGGCAGGGTTACGTGGTCAG GATGAGGGTAAGGCGGGGGGGGCATCGTTCCACCTTATGCCTCACTAGCA ATCGGTCTCACGATTCACGTAAGACTCGTGTCGTGTGAGTGCCTGTCGCG GACGAGGACAAAAAATGCGGTCCGTTCGCCCGCGTCGAGCATCGATGAGA GGCTATTGGCGGTTTCATTTTTCTTTGAGGAGATTTTTGCTAAGATTGCG TTCTGGGATAATGGTGACCAATTGGAAGCGTTTCCCCCGAGTGGATAAAT AGCTTGCCAGCTTTATACAGTTTACTGTCCCAAATCGATCAAAAGCGATG GACGTGCGAAAGCCCGCCTGCCTGCTATCCCCCCCCCAACCCCTGCCCAC CCTAGAACCTTATGTCTATCTGTCTCACGTAAACCCCAAAACACGGCATG CCCTCCCCCATTACCTGCTTCGTTCTCGGAACGTAAAACGCTTGGCTGCA TAGTGGTGACATGGTGTTTTCTGGGCACACGACGTGTCTCCTGATGGTGG CTATGACGTTTGGCAAGTACTGCCGCGCGAAGCACCTCCAGACGAAGGTC ATCTTCAGAGGTTTCCACCTGTCTGAGAATCTGCTCTCGGCTGTCAGGCG GACGGTGTACGCCTACGTGGTCATGGGGTGCCTCGTTATCATCGGGTCGA AGCTACACTATACCCTAGATGTATTGCTCGCGGCACTGATCTGCACATGG TGAGCCTTGTCCCCTCCCTAGCCGTCGCTTCGTGGCTCCTCGCGATACAT ATATGGTGTGGGTACCGGTAGCTGCTCTAATTAGTTGTTGAAGGCCTCGT CAAGTGCATGGAGCTTTATAGAGAGGCATTGGATTATTTCTCAAGAAGGG GAAGAGAGAGGGAAAGTAAAGGCGGGGATGCACGCTAGGTGACTGTCGTC CCCTCCCCCCCCCGCCCCCCCCCTTTTAGAGAGAAATAAGACTGTACGGA TATCCCGCATGTCCTGACTACTCCATACCCCGCATATTTGTAGGGTACAG TATCTGCAATCAATGTAGAATCGCGCAAGTTTCCGCGCGCAATTGGTATT GAAAAGAAGGAGCGCAACATGAACGTTGTCATACGCAGCCCCCACCAGTG CAGACGCGTTTTGCCTATATCGCTCCGGTGAATGGTCCTGTAGTCAAGGG GTGAAACCTTGAGTACGCCCCTCCCCTCCCCCAACCAGTGTTAAATTATA CATACAGTACACGGAGCGCTTTTTGCTCCCTTTTTACCCATCTCAGGTCT CTTATCAGGCTTTCAAGAGACAACCGAAGAAGATATAAACGAAAACGCCC GGAGGCGTTGCTGACCCCGTTCGACCTTCCACGCTTTTTGTTGACTTACA ACACAACTCTCCTCATCACTAAAACACAGTACAAGGTAGTGCTTGTCTTC TCCTGCCAACACCGTCCCCCGCCTCCCTCATGCTTTTTTCTCTTGTCCAA ACCCATCTTCTTCCCTTGCTGCGTGTTTTGCGGGGGGGGGACATCGCAGC GCGTTTTCGGTTTACCATGATTGGGCAAGGCACGACCTCTTGCGAAAGAA GTTCCGCATCGTGAAGTGGCTGGAATCCGAGGATGTTCGAGAACTGGACG AGCTGGCCTACACCCTGGCCAGACGTCCATGA
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Coding sequence (CDS) from alignment at H-elongata_contig50496:420..3851+

>mRNA_H-elongata_contig50496.12294.1 ID=mRNA_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig50496:420..3851+ (Himanthalia elongata Himel1 dioecious)
CAGGCCTCGTTCCACCCGGGCTTCCTGCGCTGGGCGTACGCGTCGCGCCT
CCTCGCCGTGGCCTCGTACTTCTTGGTGTCAATGTACGTTAACGCCCTTG
CCACCATGGTGTCCACCCACCGCAACCCCTACGCCATGATGCTCGACCAC
TCCGGGGAGCCGCTGGCCTCGCACACGCTGCCGGACCTCGGTCACGACCT
GTGGGCCTTCTGCCTCACAAGCAGGCCTCGTTCCACCCGGGCTTCCTGCG
CTGGGCGTACGCGTCGCGCCTCCTCGCCGTGGCCTCGTACTTCTTGGTGT
CAATGTACGTTAACGCCCTTGCCACCATGGTGTCCACCCACCGCAACCCC
TACGCCATGATGCTCGACCACTCCGGGGAGCCGCTGGCCTCGCACACGCT
GCCGGACCTCGGTCACGACCTGTGGGCCTTCTGCCTCACAAGGCTGGGGT
ACCACACGGACTACATCGACGAGCACGCCCTTCCTGATCGCATGGTGAAG
TTCGCGGGCAAGGTGGTGTTCCCGTTTATTCTGTGCCACCCTCACCGGCT
GAAGATCGTCCGGAGAGTCTTCACGATCTTCGGTACGGTGCTACTCCTGA
GGGCGGTGTCTGTTTCCGTGACGGTGCTGCCAGACGCGTCTCCCGTTTGC
CGAGAGAGACTGGAGGCTGGGGTACCACACGGACTACATCGACGAGCACG
CCCTTCCTGATCGCATGGTGAAGTTCGCGGGCAAGGTGGTGTTCCCGTTT
ATTCTGTGCCACCCTCACCGGCTGAAGATCGTCCGGAGAGTCTTCACGAT
CTTCGGTACGGTGCTACTCCTGAGGGCGGTGTCTGTTTCCGTGACGGTGC
TGCCAGACGCGTCTCCCGTTTGCCGAGAGAGACTGGAGGAGCGCGGTGCG
ATCTCGAGCCTTTTCCCCCGGGCGTTCGCTGAGGCGGCATATTTCACATG
GTCGCCGACCAGTTTCGTCACTTGGAGCGCGGTGCGATCTCGAGCCTTTT
CCCCCGGGCGTTCGCTGAGGCGGCATATTTCACATGGTCGCCGACCAGTT
TCGTCACTTGTGGTGACATGGTGTTTTCTGGGCACACGACGTGTCTCCTG
ATGGTGGCTATGACGTTTGGCAAGTACTGCCGCGCGAAGCACCTCCAGAC
GAAGGTCATCTTCAGAGGTTTCCACCTGTCTGAGAATCTGCTCTCGGCTG
TCAGGCGGACGGTGTACGCCTACGTGGTCATGGGGTGCCTCGTTATCATC
GGGTCGAAGCTACACTATACCCTAGATGTATTGCTCGCGGCACTGATCTG
CACATGTGGTGACATGGTGTTTTCTGGGCACACGACGTGTCTCCTGATGG
TGGCTATGACGTTTGGCAAGTACTGCCGCGCGAAGCACCTCCAGACGAAG
GTCATCTTCAGAGGTTTCCACCTGTCTGAGAATCTGCTCTCGGCTGTCAG
GCGGACGGTGTACGCCTACGTGGTCATGGGGTGCCTCGTTATCATCGGGT
CGAAGCTACACTATACCCTAGATGTATTGCTCGCGGCACTGATCTGCACA
TGCGCGTTTTCGGTTTACCATGATTGGGCAAGGCACGACCTCTTGCGAAA
GAAGTTCCGCATCGTGAAGTGGCTGGAATCCGAGGATGTTCGAGAACTGG
ACGAGCTGGCCTACACCCTGGCCAGACGTCCATGACGCGTTTTCGGTTTA
CCATGATTGGGCAAGGCACGACCTCTTGCGAAAGAAGTTCCGCATCGTGA
AGTGGCTGGAATCCGAGGATGTTCGAGAACTGGACGAGCTGGCCTACACC
CTGGCCAGACGTCCATGA
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