mRNA_H-elongata_contig50496.12294.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A6H5KC29_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC29_9PHAE) HSP 1 Score: 470 bits (1209), Expect = 1.510e-162 Identity = 232/302 (76.82%), Postives = 258/302 (85.43%), Query Frame = 1
Query: 1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARRP 906
+ASFH GFL W YASRLLA +FL+++Y+NALATMV+THRNPYAM+LD SGEPL +HTLPDLGHDLWA L RLG+HTDYIDEHALPDRMV FAG V FILCHP RLKI+RRVF IFGTVL++RAVSVSVTVLPDASPVCRER EE AI+ LFP AF EAA F WSPTSFVTCGDMVFSGHTTCLLMVAMTF +YCRA LQTKV+ RGFHLSE +LSAVRR VYAYV +G LVIIGSKLHYTLDVLLA L+ C FS YHDWA HDLLRK R+++WLES++VRE D LAYT+A+RP
Sbjct: 181 RASFHRGFLCWNYASRLLAAGFFFLLAVYLNALATMVATHRNPYAMLLDRSGEPLGAHTLPDLGHDLWALLLNRLGHHTDYIDEHALPDRMVSFAGMVGDLFILCHPQRLKIMRRVFIIFGTVLMMRAVSVSVTVLPDASPVCRERFEEDAAIAELFPGAFFEAARFVWSPTSFVTCGDMVFSGHTTCLLMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVTLGALVIIGSKLHYTLDVLLAVLVTFCTFSFYHDWALHDLLRKNVRVMEWLESDEVREQDLLAYTMAKRP 482
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: D7FZR1_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR1_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 7.410e-137 Identity = 202/256 (78.91%), Postives = 221/256 (86.33%), Query Frame = 1
Query: 1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALI 768
+ASFH GFL W YASRLLA +FLV++Y+NALATMV+THRNPYAM+LD SGEPL +HTLPDLGHDLWA L RLG+HTDYIDEHALPDRMV FAG V FILCHP RLKI+RRVF IFGTVL++RAVSVSVTVLPDASPVCRER EE AI+ LFP AF EAA F WSPTSFVTCGDMVFSGHTTCL+MVAMTF +YCRA LQTKV+ RGFHLSE +LSAVRR VYAYV +G LVIIGSKLHYTLDVLLA L+
Sbjct: 175 RASFHRGFLCWTYASRLLAAGFFFLVAVYLNALATMVATHRNPYAMLLDRSGEPLGAHTLPDLGHDLWALLLNRLGHHTDYIDEHALPDRMVSFAGMVGDLFILCHPQRLKIMRRVFIIFGTVLMMRAVSVSVTVLPDASPVCRERFEEDAAIAELFPGAFLEAARFVWSPTSFVTCGDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVALGALVIIGSKLHYTLDVLLAVLV 430
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A835YVL2_9STRA (PAP2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL2_9STRA) HSP 1 Score: 332 bits (850), Expect = 1.320e-108 Identity = 174/304 (57.24%), Postives = 212/304 (69.74%), Query Frame = 1
Query: 1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAI---SSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
+A F GFL Y SRLL ++FLV Y+NA+ATMVS+HRNPY +LD G L +HT+PDLGHDLWA LTRLG+HTD+IDEH+LPDR+V G+V F I+ HP R RV IFG +LL+RAVSVSVTVLPDASPVC + LFP FA AA F PTS +TCGDM+FSGHTTCL+M A+ F +Y RAKHLQTKV+FRG +SE L+ +R VYAYV GCLVIIGSKLHY++DVL A + F YH+WAR R++ R+++WLE + VR LD+ AY ARR
Sbjct: 153 RACFSRGFLSHQYLSRLLFSVAFFLVCAYLNAIATMVSSHRNPYIRLLDLHGNLLPTHTMPDLGHDLWAVVLTRLGHHTDFIDEHSLPDRLVSALGRVTFFLIIAHPRR-----RVSMIFGALLLMRAVSVSVTVLPDASPVCHAQFTSAAGAYKHQPLFPAVFARAARFVLDPTSTITCGDMMFSGHTTCLMMFALVFRQYLRAKHLQTKVLFRGA-VSERFLAPIRHAVYAYVACGCLVIIGSKLHYSIDVLYAIGLSFFTFRTYHEWARTAQSRRRNRLLQWLEDDTVRGLDDAAYARARR 450
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A8K1C3K0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3K0_PYTOL) HSP 1 Score: 194 bits (492), Expect = 2.020e-55 Identity = 121/296 (40.88%), Postives = 164/296 (55.41%), Query Frame = 1
Query: 25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEE-RGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
L +AY SRL + F ++ Y+NALA +++ R P+ ++L + S TLPDLGHDL+ + + + T YI+ LPD + G VV ++ HP RL I+RR IF + L+RA V+VT LPDASP+C + E +G S+ FP+AF A P+ +TCGDMVFSGH L++ AM YC L T R ++ L VR VYA G I+G++LHYTLDVL+A I T + YH H R FRI+ WLE E+V +D AY ARR
Sbjct: 105 LSFAYLSRLGVSLAIFAIASYLNALAAVIAGWRTPHVVILTLDNQDSGSKTLPDLGHDLFKYVMGKFYGQTTYIEWFDLPDEFIGAVGTVVGVLLVLHPRRLLILRRFCAIFACINLMRACCVAVTSLPDASPMCISQFENGKGVYKSMPMFPKAFVRAWKVLTRPSQHITCGDMVFSGHCVFLMLCAMIVKTYCVRAELNTPFTRRYSYV----LWMVRYYVYAAAFGGIFAIVGTRLHYTLDVLIAMYITTQVWFTYHWLCMHP--RMSFRILNWLEHEEVHFIDMDAYRKARR 394
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: K3XC87_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC87_GLOUD) HSP 1 Score: 188 bits (477), Expect = 3.530e-53 Identity = 118/297 (39.73%), Postives = 160/297 (53.87%), Query Frame = 1
Query: 25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERL--EERGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
L +AY SR + F ++ Y+NALA ++ R P ++L+ + TLPDLGHDL+ F +T++ T YI+ LPD + G VV ++ HP RL I+RR IF + L+RA V+VT LPDASP+C + E RG SL FP+AF A P+ +TCGDMVFSGHT ++ M YC L T R ++ L VR VY G I+G++LHYTLDVL+A I + YH H + FR++ WLE E+V +D AY ARR
Sbjct: 105 LSYAYLSRFAFSLAIFAIASYLNALAAAIAGWRTPNVVILNLDKQNSGLKTLPDLGHDLFKFVMTKIYGQTAYIEWFDLPDEFLAAVGTVVGILLIVHPRRLLILRRFCAIFACINLMRACCVAVTSLPDASPMCISQFDSEVRGLYKSLPIFPKAFGRAWKVLVRPSQHITCGDMVFSGHTVFFMLCCMIVKTYCVKSELNTPFTRRYSYV----LWMVRYYVYTGAAFGIFAIVGTRLHYTLDVLIAVYITAQVWFTYHWLCAHP--KSSFRVLNWLEHEEVHFIDLDAYRKARR 395
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A2D4BK11_PYTIN (PAP2_C domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK11_PYTIN) HSP 1 Score: 188 bits (478), Expect = 4.280e-53 Identity = 117/294 (39.80%), Postives = 165/294 (56.12%), Query Frame = 1
Query: 13 HPGF----LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEE-RGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAM---TFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDV 864
H GF L WAY SRL + F ++ Y+NALA++++ R P ++L+ + + TLPDLGHDL+ F +T++ HT ++ LPD + G VV ++ HP RL I+RR IF + L+RA V+ T LPDASP+C + E +G S+ FP+AF A P+ +TCGDM+FSGH+ L++ AM T YC L T R +L +R VYA G IIG++LHYTLDVL+A I T + YH + + R FR++KWLE +DV
Sbjct: 96 HQGFIAEMLSWAYLSRLAFSVAIFALASYLNALASVIAGWRTPNVVILNLNKQDTGEKTLPDLGHDLFKFVMTKIYGHTTNLEWFXLPDEFIGTVGSVVGLLLVVHPRRLLILRRFCAIFACINLMRACCVTATSLPDASPLCISQFESGKGLYKSMPMFPKAFFRAFKVLTRPSQHITCGDMIFSGHSVFLMLCAMIVRTVXVYCVESELNTPFTRR----FPYVLWMLRYFVYAGAAGGIFAIIGTRLHYTLDVLIAMYITTQVWLTYHWLSANP--RSSFRVIKWLEHDDV 383
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A3F2RRE6_9STRA (PAP2_C domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRE6_9STRA) HSP 1 Score: 187 bits (474), Expect = 5.930e-53 Identity = 114/296 (38.51%), Postives = 162/296 (54.73%), Query Frame = 1
Query: 25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLE-ERGAISSL--FPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
L +AY SRL S F ++ Y+N LA +++ R P ++L + E ++ TLPDLGHDL+ F +T++ T YI+ LPD + G ++ HP RL I+RR IF + L+RA V+VT LPDASP+C + + ERG S+ FP+AF A P+ +TCGDM+FSGH L++ M YC L T R +L +R +YA G I+G++LHYTLDVL+A I + YH H ++ F ++ WLE E+V +D AY ARR
Sbjct: 90 LSYAYLSRLAFSLSIFAIASYLNTLAAVIAGWRTPNVVILSLTKESTSAKTLPDLGHDLFKFVMTKIYGQTTYIEWFDLPDEFLAAVGMTTTLILILHPRRLLILRRFCFIFAIINLMRACCVAVTSLPDASPMCISQFDSERGDYKSMPIFPKAFFRAWKVLIRPSQHITCGDMIFSGHAVFLMLCVMFARTYCVRSELNTPFTRR----FPCVLWMIRYYIYAGSAFGAFAIVGTRLHYTLDVLIAIYITAQVWFTYHWLTTHP--QESFALLNWLEHEEVHFIDHNAYRKARR 379
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A5D6Y6V8_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6V8_9STRA) HSP 1 Score: 184 bits (468), Expect = 6.570e-52 Identity = 118/293 (40.27%), Postives = 164/293 (55.97%), Query Frame = 1
Query: 34 AYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERL---EERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
AY SRL LV+ Y+NALA +++ R P ++LD + E TLPD+GHD + + TR+ + I LPD+ + G +V ++ HP RL I+RR IF + L+RA+ V+ T LPDASP+C + + R +FP AFA A P +TCGDMVFSGHT ++ AMT YC L T R +L VR TVYA V +G +I+G++LHYTLDVL+A + T + +YH W + R F +++WLE +DVR +D AY ARR
Sbjct: 101 AYLSRLAFAVLTMLVTSYLNALAAVIAGWRTPNIIILDLNNEDSGEKTLPDIGHDTFKYVATRI-FGRFVITWFHLPDQFLGAVGALVVLLLVFHPRRLLILRRFCAIFACINLMRAMCVAATSLPDASPMCIAQFGSADGRYKARPIFPAAFARALKVLLRPADHITCGDMVFSGHTVFFMLCAMTVKWYCIKAELNTPFTRR----YPFVLWLVRYTVYAGVALGIFMIVGTRLHYTLDVLVAIYVTTQVWFMYH-WLLSNP-RPGFGVLQWLEHDDVRFIDSDAYRQARR 386
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A813EHY7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EHY7_POLGL) HSP 1 Score: 184 bits (466), Expect = 1.390e-51 Identity = 115/314 (36.62%), Postives = 170/314 (54.14%), Query Frame = 1
Query: 1 QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYH----TDYIDEHA--LPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEER-GAISS--LFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIF---------RGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRI--------VKWLESEDV 864
+A F FL Y RL +FL++ YVN+LA++++ +R P+ ++ D G L + TLPD+GHDL + +T LG+ T +++ + +PD +V F FI HP R +I+RRV I V LLRA+ V VT LPDA P C+ + G+ +FP AF A W P +TCGDMVFSGHT+ L+ AM YCR + L +F F L+E + VR Y + ++II ++LHYTLDV LA + + +F YHD A ++ L+++ I ++WLE+E+V
Sbjct: 59 RAGFTFHFLSREYLQRLAFAVVFFLIAAYVNSLASVIAGYRTPWVVVKDLDGNLLDTSTLPDIGHDLSSALVTSLGFEVHEVTKWLEVNGSLIPDALVHFMVACTGIFIFAHPKRFQIIRRVLMILAFVFLLRALCVFVTQLPDAHPKCQAQFTSATGSYKRRPMFPHAFYRAWLVLWHPDKHITCGDMVFSGHTSVLMQCAMVVWHYCRLEELPGGPVFTKPMQILTCNRFALTERFCTLVRAATILYTAIAAILIIATRLHYTLDVALAVYLNSRSFRWYHDAASYEKLKRRKSIFLLGYGSVMQWLEAEEV 372
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Match: A0A5D6Y591_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y591_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.980e-51 Identity = 113/293 (38.57%), Postives = 157/293 (53.58%), Query Frame = 1
Query: 25 LRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHSGEPLASHTLPDLGHDLWAFCLTRLGYHTDYIDEHALPDRMVKFAGKVVFPFILCHPHRLKIVRRVFTIFGTVLLLRAVSVSVTVLPDASPVCRERLEERGAISSLFPRAFAEAAYFTWSPTSFVTCGDMVFSGHTTCLLMVAMTFGKYCRAKHLQTKVIFRGFHLSENLLSAVRRTVYAYVVMGCLVIIGSKLHYTLDVLLAALICTCAFSVYHDWARHDLLRKKFRIVKWLESEDVRELDELAYTLARR 903
L +AY SR + F ++ Y+NALA +++ R P ++LD + + TLPDLGHDL+ + +T++ T YI+ LPD + G + ++ HP RL I+RR IF + ++RA V+VT LPDASP C IS F RA+ P+ +TCGDMVFSGHT ++ AMT YC L T R +L VR VY V G I+G++LHYTLDVL+A I ++ YH H + FR++ WLE E+V +D AY ARR
Sbjct: 105 LSYAYLSRFAFSLTIFAIASYLNALAAVIAGWRTPNVVILDLNKQDTGEKTLPDLGHDLFKYVMTKIYGQTTYIEWFDLPDEFLAAVGTCIGILLIVHPRRLLILRRFCAIFACINMMRAFCVAVTSLPDASPNC---------ISQAFDRAWKVLV----RPSQHITCGDMVFSGHTVFFMLCAMTVKTYCVKSELNTPFTRR----FPYVLWMVRYYVYTGVAFGVFAIVGTRLHYTLDVLIAVYITAQVWATYHWLCAHP--KSSFRVLNWLEHEEVHFIDLDAYRKARR 378 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50496.12294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig50496.12294.1 >prot_H-elongata_contig50496.12294.1 ID=prot_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp QASFHPGFLRWAYASRLLAVASYFLVSMYVNALATMVSTHRNPYAMMLDHback to top mRNA from alignment at H-elongata_contig50496:420..3851+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig50496.12294.1 ID=mRNA_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3432bp|location=Sequence derived from alignment at H-elongata_contig50496:420..3851+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig50496:420..3851+ >mRNA_H-elongata_contig50496.12294.1 ID=mRNA_H-elongata_contig50496.12294.1|Name=mRNA_H-elongata_contig50496.12294.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig50496:420..3851+ (Himanthalia elongata Himel1 dioecious)back to top |