mRNA_H-elongata_contig50204.12246.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50204.12246.1
Unique NamemRNA_H-elongata_contig50204.12246.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A6H5JXQ6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ6_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 8.330e-133
Identity = 270/621 (43.48%), Postives = 347/621 (55.88%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKVSREKPSGGIPSLQTSPSPTGSKIMHSRQECEKRPEEKRLSNILTEGKEEGWGAATDGAELWFASRGSGSVGSDHSTVASWGVGDETAAGDIRSGVGVTSDDLVAAAAVVESDYRSGSAESASREEYIPEVSDGVTYDDEETRRLQLKASEVLTLSGMGLNRLQRELTEQAIEKTDLRSLKLSRQLSPPTLERLIIDETEAKDPLDPDTSFDKSPEVPNMKRRSLPTITWGPSVVNNTKTNIAMSGAIDGSVNGYECSEGADAAESPEYIRRCSVAKTFSPRDLGLGDVQDNVVDDERPAGAT---SGWRRDTIVNKLSKLGTGPRVCGDGHKTSLDEVFGFDETQSVLGDIPPERLFSQTGMLHPDAPVKV 1854
            TTVGYGDITSASDLER  +IVGMIIGATVFGYIIGNVA I+ENF+  D+IENGKM+QI++WLYDRKFP ALA+KIRRQYRYIF E+ VFD+ EI++ MPGVMSTS+++AQHR++  GVGFL +RPPVLV RLL+KMVPCFA+ G+VLYLEHE+G HWY LR G +SFYV+++ L+ QSEV+ MR+LS DGHFGL P+LL+VLNSETATATA A+LLTIRK DLIDIL  WPE+  EL +EAE  F E+K         +  + T  S +G                     +  EG+ E  G+  +G++                 VA        A     +G G+  D+ +    V       G+ E+A           GV +    T          + ++           T   +E    R+ K   +L PP +          KD   P  S D S E                    N  +N+A               +G D +  PE++RRC VAKTFSP DLGLG   D     E    A+   +  RR TI   ++++        DG K S+DEV G  +  ++LG IPPERLFS TGM HP+AP+K+
Sbjct:    8 TTVGYGDITSASDLERCFSIVGMIIGATVFGYIIGNVAAIMENFNVTDAIENGKMNQIKEWLYDRKFPPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVMSTSLLYAQHRAVAKGVGFLRQRPPVLVGRLLRKMVPCFANCGDVLYLEHEVGGHWYFLRAGTISFYVSMSPLETQSEVLLMRSLSDDGHFGLTPVLLNVLNSETATATAAAELLTIRKVDLIDILQHWPEVMAELTIEAERLFKEVKAE------AVGDVSTDDSSSG--------------------ELEREGRREAEGSGGEGSKXXXX------XXXXXXRVA------RKAEAAAMAGKGIGFDESLRIPGVA------GAEEAA-----------GVLHAAATTXXXXXXXXPTVGVAAG---------TTNPVEAARGRAAK---KLRPPPIV--------TKDA--PLISLDLSSEKTQDDDH-------------NKNSNVA--------------GDGNDMSADPEHMRRCFVAKTFSPSDLGLGVSADGASTPEAVTKASLMKAQRRRRTINKGITEI--------DGRKQSVDEVLGLSD--ALLGSIPPERLFSITGMFHPEAPIKL 514          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: D8LFK4_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK4_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 9.360e-115
Identity = 257/625 (41.12%), Postives = 324/625 (51.84%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKVSR-EKPSGGIPSLQTSPSPTGSKIMHSRQECEKRPEEKRLSNILTEGKEEGWGAATDGAELWFASRGSGSVGSDHSTVASWGVGDETAAGDIRSGVGVTSDDLVAAAAVVESDYRSGSAESASREEYIPEVS--DGVTYDDEETRRLQLKASEVLTLSGMGLNRLQRELTEQAIEKTDLRSLKLSRQLSPPTLERLIIDETEAKDPLDPDTSFDKSPEVPNMKRRSLPTITWGPSVVNNTKTNIAMSGAIDGSVNGYECSEGADAAESPEYIRRCSVAKTFSPRDLGLGDVQDNVVDDERPAGAT---SGWRRDTIVNKLSKLGTGPRVCGDGHKTSLDEVFGFDETQSVLGDIPPERLFSQTGMLHPDAPVKVG 1857
            TTVGYGDITSASDLER  +IVGMIIGATVFGYIIGNVA I+E+F+  D+IENGKM+QI++WLYDRKFP ALA+KIRRQYRYIF E+ VFD+ EI++ MPGV+STS+++AQHR++  GVGFL +RPPVLV RLL+KMVPCFA+ G+VLYLEHE+G HWY LR G VSFYV+V+ L+ QSEV+ MR+LS DGHFGL P+LL+VLNSETAT TA A+LLTIRK DLIDIL  WPE+  EL +EAE  F E+K  R  K S G+  LQ   S T                E  L+  L E                                        T AG                             + + + E + +VS  D  + + E   R + + S                  E+ +E+                                         E   M  + +                    G +D                 PE++RRC VAKTFSP DLGLG   D     E    A+   +  RR TI   ++++        DG K S+DEV G  +  ++LG +PPERLFS TGM HP+AP+KV 
Sbjct:  347 TTVGYGDITSASDLERCFSIVGMIIGATVFGYIIGNVAAIMESFNVTDAIENGKMNQIKEWLYDRKFPPALADKIRRQYRYIFTEVGVFDNSEIVDVMPGVISTSLLYAQHRAVAKGVGFLRQRPPVLVGRLLRKMVPCFANCGDVLYLEHEVGGHWYFLRAGTVSFYVSVSPLETQSEVLLMRSLSDDGHFGLTPVLLNVLNSETATVTAAAELLTIRKDDLIDILQHWPEVMAELTIEAERLFKEVKKFRARKQSAGV-KLQAFSSRT----------------ENTLNGSLAESARNNSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQAGGDXXXXXXXXXXXXXXXXXXXXXGMLFRGDESKQAEAVGDVSAVDSSSGESEREGRREAEGSXXXXXXXXXXX----XXXERRVER---------------------------------------QAEAAAMAAKGI--------------------GLVD-----------------PEHMRRCFVAKTFSPSDLGLGVSADGASTPEAVTKASLMKAQRRRRTINKGITEI--------DGRKQSVDEVLGLSD--ALLGSVPPERLFSITGMFHPEAPIKVS 864          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 2.670e-37
Identity = 86/283 (30.39%), Postives = 152/283 (53.71%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVT----VNLLKAQSEVVHMR---------NLSGDGHF----------------GLAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKVSREK 762
            TTVGYGD+   + +ER   +VGM+IGATVFGYI+GNV++++E+FD   ++   KM ++++++  R+FP   + ++ +QY+Y +K++SV D++ IL ++P    TS++FAQ+      + FL   PP+ V  L+  +   +A  G+VL+ + E+    Y L  GKV+ + T    V   K  S+  H           N++G+G F                G   ++L V     A A +  D+ TI K +L+  L  + +++  L  +AE +   +   +++
Sbjct:  416 TTVGYGDVVVTTTVERCFCVVGMLIGATVFGYIVGNVSVMMESFDLKSALRTEKMDRVKEYIVSRRFPQKFSRRVLQQYKYHYKKISVLDNYAILESLPTTARTSLLFAQYHDAVDQLSFLQNNPPIFVSNLVGALSASYAKPGDVLFYQEEVASDLYFLVTGKVNLFATFSAKVTAEKTFSDGFHRSTMGHGDLEANVTGEGPFAVQTFSFAKVFKDSRIGEVGVMLDVQQPIAAVAMSVCDMFTIGKENLLSALDGFVKVQASLIEDAENFMRRLDEFKKR 698          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A7S1CDH6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDH6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.980e-26
Identity = 71/243 (29.22%), Postives = 130/243 (53.50%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGH-FGLAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAE 726
            TTVGYGD+ + +  ER+ A+V M++GA+VFG+IIGN++ +L + DA  +    KM +++++L DR+FP  LA+++R+ + Y     S+FD   IL+ +   + + ++   +      + FL ++    V  ++Q++ P F  +GE + +E ++G+  Y L  G V     +       + +    L  +GH FG   +L   +    ATA    D  ++ K DL   +  +P+ R  L+  A+
Sbjct:  370 TTVGYGDVNAGTTYERLYAMVAMLVGASVFGFIIGNISSLLGSMDARQAAYKHKMDEVKEYLRDRRFPVPLAKRVRKYFEYYMDRRSIFDENVILSELSNNLRSQVVMQSNHDTISRIHFLREQDKGFVTAVMQRIKPMFVVAGERIMMEGDVGKEMYFLLRGTVEISCNLRENVKHDDTI---GLFTEGHYFGEDALLSGNVRPYNATAVGHCDTFSLAKEDLEMSIFHFPDSRRVLEEAAK 609          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A024TQP4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQP4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.080e-24
Identity = 80/273 (29.30%), Postives = 129/273 (47.25%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHVLNS----ETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKVSREKPSGGIPSLQTSPSPT 807
            TT+GYGDI   +  E ILA+  M+IG ++FGY+IGN+  +++N +A   +++ +++ ++++   R  P A  +++   + Y ++  SVFD   ILN +P VM   ++          + FLA+    LV  L   M P F    E +YL++EI  H + L  G+VS    V     Q     +  L+   HFG   I   V         A A +   L  + +  + +I H WPEI    +L A       KV R    G + +    P P+
Sbjct:  308 TTIGYGDIIPKTKTELILAMFVMVIGVSMFGYVIGNITALVDNINASGRMQSERLTSLKEYAMVRNLPKATTKRMMDHFEYFYRHRSVFDEEAILNNLPTVMRNEVVHHVLSKFISRIDFLAEFHEGLVSDLAVAMNPFFCIKDEAVYLQNEIAVHVFFLTKGEVSL---VKSYPNQLADTTLLTLTSGKHFGEVEIYHQVYGQGVRLSCAVAKSYCQLTFLSRQVIENIGHTWPEILDHFRLNAIA-----KVKRMSKRGSLDNYSPDPPPS 572          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A2M9Y9L8_9LEPT (Cyclic nucleotide-binding protein n=8 Tax=Leptospira TaxID=171 RepID=A0A2M9Y9L8_9LEPT)

HSP 1 Score: 115 bits (289), Expect = 4.970e-24
Identity = 75/237 (31.65%), Postives = 122/237 (51.48%), Query Frame = 1
Query:    4 TVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELK 714
            TVGYGDIT ++D++RI  I  M++GA V+  +IGN+A IL N D   + +  KM+Q+  +L  R  PA +  ++R  Y YI       D   +LN +P  +   +    HRS+   V FL    P LV  L+  + P    +G+ ++ + E G+  YIL  G      +V++L +  + V + NL     FG   ++     S T  AT+T ++ T+ K D    L ++ E R+ ++
Sbjct:  196 TVGYGDITPSTDVQRIYTIFVMMLGAGVYATVIGNIASILGNLDITKAAQMKKMAQVDSFLKARNIPADMRRRVRDYYMYIIDRGWGEDESLLLNDLPLSLRKEVKIQLHRSLLEKVPFLKGADPALVASLVFSLTPTIFLNGDTVFKKGEKGDCLYILSEG------SVDILGSDDKTV-LLNLQEGQFFGELALVTEEPRSATVRATSTCEIYTLSKSDFDHSLERFSEFRSAIE 425          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A024FVJ1_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVJ1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.720e-23
Identity = 71/262 (27.10%), Postives = 130/262 (49.62%), Query Frame = 1
Query:    4 TVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHV-LNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEG--YFHEIKVSREKPSGGIP 780
            T+GYGDI + ++ ER+++IV M +G T+FGY+IG ++ ++ NFDA  S+ + +M  +++++  R  P  L  +++  + Y ++  SVF    IL  +P  +   MI   +  I   + +       L+  L+  M P  A   E +Y ++EI  H + +  G+ S  +T     A+ E++  +   GD HFG   +     +   +A  T  ++L  + +  +  +  QWPEIR      A+     +E K +     G +P
Sbjct:  298 TIGYGDIVAQNNYERLVSIVIMAVGVTLFGYVIGTISSLVSNFDAQASLYDEQMLLVKEYIISRSMPTHLRTRVQEHFEYYYQNRSVFKERRILERLPTTLRNEMIHHSNSKIVAVIAYFRHCHESLISDLVMAMHPFNALKDEYIYTQNEIASHVFFILKGETSILLTS--AGARKEILIAKIEVGD-HFGELEVFAGKDIRIVSAIVTTYSELTFLSRSAIAKVSDQWPEIRQHFDQAAQENILLYEEKTNLSFNDGFVP 556          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A7S1C9S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9S5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.820e-23
Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKV 495
            TTVGYGDI + +D ERILAI  M++GA+VFGY++GNV ++LEN D   ++   KM  +++++ DRK P  L+ K+RR Y Y +   SVF+   IL  MP V    +             +L      ++  LL  + P      E+++ + ++G   +I+  G+V
Sbjct:  320 TTVGYGDINATNDTERILAICSMLVGASVFGYVVGNVTVLLENIDPQAALRKEKMESVKEFVRDRKLPPYLSRKVRRYYEYFYLRKSVFEEDTILANMPSVFRGQVAKCGFERFLRDCKYLRSASNFIISGLLLAIRPQMVEPWEIVFAQGDLGNDMFIIVSGEV 484          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: W4GBE9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBE9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 8.250e-23
Identity = 79/275 (28.73%), Postives = 128/275 (46.55%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLHVLNSETATATATADL---LTIRKGDLID-ILHQWPEIRTELKLEAEGYFHEIKVSREKPSGGIPSLQTSPSPTGS 813
            TT+GYGDI   +  E I+A+  M+IG ++FGY+IGN+  +++N +A   ++  +++ +++++  R  P   ++++   + Y +   SVFD   ILN +P VM   ++          + FLA+    LV  +   M P F    E +YL++EI  H + L  G VS    V     Q     +  L+G  HFG   +   V       + A A     LT     +I+ I H WPEI    +L +       KV R    G + +      PT S
Sbjct:  319 TTIGYGDIIPKTKTELIIAMSVMVIGVSMFGYVIGNITALVDNINASGRMQTERLTSLKEYVMVRNLPKQTSKRVLDHFEYFYSHRSVFDEEAILNNLPTVMRNEVVHHVLNKFISRIDFLAEFHEGLVSDMAVAMNPFFCIKDEAVYLQNEIAVHVFFLTKGTVSL---VKSYPNQLADTTLMTLTGGQHFGEVELYHQVYGQGVRLSCAVAKTYCQLTFMSRQVIENIGHTWPEILDHFRLNSIS-----KVKRMSKRGCLDNYSPDVPPTAS 585          
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Match: A0A7S3UWF8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF8_HETAK)

HSP 1 Score: 112 bits (280), Expect = 1.090e-22
Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 1
Query:    1 TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSIENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPGVMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLEHEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFG-LAPILLHVLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKVSREK 762
            TTVGYGDIT+   LE    I+ MI+G ++FGYIIGNVA ++ + D    +   K+  +  ++  R FP  LA KIRR Y Y +K   V++  EIL+ +P  + T      H+     V FLA     +V  L+ ++ P  A  G+++  E   G+  Y + GG +     V      SE V +R L    +F   A I+    +  +  A A  DL  + + +  D    +PE+          Y   I++ RE+
Sbjct:   76 TTVGYGDITAQLPLEVGWTILIMILGTSLFGYIIGNVASLMTHEDETAMLVKAKIQSVLAYMRYRDFPDTLARKIRRHYEYSWKRSQVYNEEEILSELPHTVRTECALHIHKDTIAKVPFLADLGEDVVPLLVTRLRPMLAAHGDLIIREGMFGDEMYFVAGGTLRMEAEVYSNAVHSEEVLVRKLHVGEYFAEYAVIMDQPKHPISVRAAAYCDLFMLNRDNFNDFGEIFPEV----------YMKVIQMGRER 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50204.12246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXQ6_9PHAE8.330e-13343.48Cyclic nucleotide-binding domain-containing protei... [more]
D8LFK4_ECTSI9.360e-11541.12Cyclic nucleotide-binding domain-containing protei... [more]
D8LB68_ECTSI2.670e-3730.39Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S1CDH6_9STRA1.980e-2629.22Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A024TQP4_9STRA2.080e-2429.30Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2M9Y9L8_9LEPT4.970e-2431.65Cyclic nucleotide-binding protein n=8 Tax=Leptospi... [more]
A0A024FVJ1_9STRA2.720e-2327.10Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S1C9S5_9STRA6.820e-2335.15Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W4GBE9_9STRA8.250e-2328.73Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A7S3UWF8_HETAK1.090e-2230.98Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50204contigH-elongata_contig50204:289..3857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.7
Seed ortholog evalue6.3e-106
Seed eggNOG ortholog2880.D8LFK4
EggNOG free text desc.voltage-gated potassium channel activity
EggNOG OGsKOG0498@1,KOG0498@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-04_001880.1
Exons7
Model size1872
Cds size1872
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930825.6295974-CDS-H-elongata_contig50204:288..7561622930825.6295974-CDS-H-elongata_contig50204:288..756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 289..756 -
1691679586.7771657-CDS-H-elongata_contig50204:288..7561691679586.7771657-CDS-H-elongata_contig50204:288..756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 289..756 -
1622930825.6439295-CDS-H-elongata_contig50204:828..11041622930825.6439295-CDS-H-elongata_contig50204:828..1104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 829..1104 -
1691679586.7899225-CDS-H-elongata_contig50204:828..11041691679586.7899225-CDS-H-elongata_contig50204:828..1104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 829..1104 -
1622930825.659741-CDS-H-elongata_contig50204:1236..15951622930825.659741-CDS-H-elongata_contig50204:1236..1595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 1237..1595 -
1691679586.8018122-CDS-H-elongata_contig50204:1236..15951691679586.8018122-CDS-H-elongata_contig50204:1236..1595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 1237..1595 -
1622930825.6744373-CDS-H-elongata_contig50204:1971..21291622930825.6744373-CDS-H-elongata_contig50204:1971..2129Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 1972..2129 -
1691679586.8108528-CDS-H-elongata_contig50204:1971..21291691679586.8108528-CDS-H-elongata_contig50204:1971..2129Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 1972..2129 -
1622930825.6931605-CDS-H-elongata_contig50204:2574..27591622930825.6931605-CDS-H-elongata_contig50204:2574..2759Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 2575..2759 -
1691679586.8199527-CDS-H-elongata_contig50204:2574..27591691679586.8199527-CDS-H-elongata_contig50204:2574..2759Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 2575..2759 -
1622930825.7161825-CDS-H-elongata_contig50204:3202..34301622930825.7161825-CDS-H-elongata_contig50204:3202..3430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 3203..3430 -
1691679586.8297336-CDS-H-elongata_contig50204:3202..34301691679586.8297336-CDS-H-elongata_contig50204:3202..3430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 3203..3430 -
1622930825.738007-CDS-H-elongata_contig50204:3659..38571622930825.738007-CDS-H-elongata_contig50204:3659..3857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 3660..3857 -
1691679586.8397415-CDS-H-elongata_contig50204:3659..38571691679586.8397415-CDS-H-elongata_contig50204:3659..3857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50204 3660..3857 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50204.12246.1prot_H-elongata_contig50204.12246.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50204 289..3857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50204.12246.1

>prot_H-elongata_contig50204.12246.1 ID=prot_H-elongata_contig50204.12246.1|Name=mRNA_H-elongata_contig50204.12246.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=624bp
TTVGYGDITSASDLERILAIVGMIIGATVFGYIIGNVAIILENFDAMDSI
ENGKMSQIQDWLYDRKFPAALAEKIRRQYRYIFKELSVFDSFEILNAMPG
VMSTSMIFAQHRSITVGVGFLAKRPPVLVCRLLQKMVPCFAHSGEVLYLE
HEIGEHWYILRGGKVSFYVTVNLLKAQSEVVHMRNLSGDGHFGLAPILLH
VLNSETATATATADLLTIRKGDLIDILHQWPEIRTELKLEAEGYFHEIKV
SREKPSGGIPSLQTSPSPTGSKIMHSRQECEKRPEEKRLSNILTEGKEEG
WGAATDGAELWFASRGSGSVGSDHSTVASWGVGDETAAGDIRSGVGVTSD
DLVAAAAVVESDYRSGSAESASREEYIPEVSDGVTYDDEETRRLQLKASE
VLTLSGMGLNRLQRELTEQAIEKTDLRSLKLSRQLSPPTLERLIIDETEA
KDPLDPDTSFDKSPEVPNMKRRSLPTITWGPSVVNNTKTNIAMSGAIDGS
VNGYECSEGADAAESPEYIRRCSVAKTFSPRDLGLGDVQDNVVDDERPAG
ATSGWRRDTIVNKLSKLGTGPRVCGDGHKTSLDEVFGFDETQSVLGDIPP
ERLFSQTGMLHPDAPVKVGHIFL*
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mRNA from alignment at H-elongata_contig50204:289..3857-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50204.12246.1 ID=mRNA_H-elongata_contig50204.12246.1|Name=mRNA_H-elongata_contig50204.12246.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3569bp|location=Sequence derived from alignment at H-elongata_contig50204:289..3857- (Himanthalia elongata Himel1 dioecious)
ACAACGGTGGGGTACGGTGACATCACGAGCGCAAGCGATCTTGAGCGAAT CTTGGCGATTGTCGGGATGATCATCGGTGCCACAGTCTTCGGTTATATAA TTGGTAATGTGGCGATAATATTGGAGAACTTTGACGCGATGGATTCTATC GAAAACGGCAAGATGAGCCAGATCCAGGACTGGCTGTACGACCGGAAGGT AATGCACCGCCCGAGAAGGTAGATCCCGCTTGGACAACATACTATTGATC CAAGAACAATGTATCGCGAGTTTTTGCCTTCACCTGGTCTACTGCAGGCA TATTATTGAGGCGATCCAAGCATTTTGATGTTACAATTCAACGTTCCGCC GTACGTACCTCGTGCATGCGATGCGTTGCCACCCCCACCCTGTTCTCTTT TCTATGAACAAACGGGTTTACAACCAGTTTCCTGCGGCACTGGCAGAAAA AATACGGCGTCAGTACCGCTACATCTTCAAGGAGTTAAGCGTTTTTGACA GCTTTGAGATATTGAACGCGATGCCCGGGGTCATGTCGACCTCAATGATA TTCGCCCAGCATCGTTCGATCACGGTAGGGGTGGGGTTCCTGGCGAAGCG ACCCCCGGTTCTAGTCTGCCGACTGCTGCAAAAAATGGTCCCATGCTTCG CACACGTGAGAAAGTTGATGCGTTGGGTATTTTATTTGTTGAATAGGTTG GTAGGGCGTTCACATGATACTTGTGCTCCACAAGAACTCATGGAGTTCCA AAACTGTTGCGTTGAACTTATTTTATATATGTATTTAGTTTCTTCCAACA TTGGAGCCTCTCAATCGGAAGAAGTAGATTTTCAGAACATTGGTGCTTAT CTTATTCCTAAAACCAACGACACAGAAATATACAGGAATATCTTTAGCCC TGCCGTATCAACCTGTGCTCACGGTCAGTAACGACGCCATACACCAACAG AATGTATAATAAGCAGCCCCATATATAGTTCTGTAGAGCTAGCCTCTTAC ACCCACAAGTCATATGTTGCGTCAACTGCTTTGTGCACTGCTCGCTTCGG GCGCATACGTGGTTCTGGTGGCCGGTACAATTGTTGGGGCCGTGTAAGAG TGGCGAAGTCTTGTACCTCGAGCATGAGATAGGGGAACACTGGTACATTC TCCGCGGGGGGAAGGTTTCGTTCTACGTGACTGTCAACCTCCTGAAGGCA CAGTCCGAGGTGGTTCACATGCGGAACTTGTCCGGAGACGGGCACTTCGG CCTTGCACCAATTCTGCTCCACGTACTCAACAGGTCTGGTGGCACGCGTT GCTAGATTCAGAATGTCTAGTAAAAAAAACTTTCCCCCAGAGCTACTTAG CGTCAGAGGGAGTCACAAGCGCTCCGCTGCTTAGCACCAGTTTGCGTTAG AACGGGTGTCAATACATATGTAATCCAGGAGCGTCGCTGTTGCGTCGTTT CGCTCGTCTGGAAATAATCTTGAAATGATCCGCTCGGTGGCTTTGTACAG TGCGTTTTCGTTTATCTCGTGTTTTGGTAGGGGTAAACGCCCGACAAGGT TTGTCATACGCTCAACACCGTGGAAGAGCCTTTGGAAGGTTATTCCAGAC ACCTTAGCTCGAGAGGATGCACCGTGTAATCAGCGTTAGCCGCCGAAGTT TTACTTTGCTCCCTACGCATGTAGAGGTTTCGGTCGGGTATAAGATAACC GTCGCTGTATGTTTCTCTTTCTCTCTAGCGAGACGGCCACCGCTACGGCA ACGGCTGACTTGCTGACGATCCGGAAGGGTGACTTGATCGATATTTTGCA CCAATGGCCGGAGATCAGGACGGAGCTTAAGCTCGAGGCAGAGGGTTATT TTCATGAGATCAAGGTCAGCAGGGAAAAGCCAAGTGGTACAGTCGACCAT CGAGAGCCTTGGAGACGAAAATCATTTGGCTTCGCGTGATTTCCACGAGT TGAAACATTGACTAATGGTGAACCCATCCCCCTAGTTGTCATCAAACACT ACTCGGTTTCCGTTCCAGCCTTAGGTTCCTACGAAAACACTTCAGCGATG TTGGAAGTCCCCGTCATTCGATCGCACCATCGCTGCATCATTGTTATCGC GTTAACGCTATGTCGGTCCTCCACTCCATGGTTTCACACTGGCTCCACAC TACCATGTGTTGCAGAAGTTCAAGGCAGCGAAGCGAGGCCTGGTATATGC CAACCACCACAACCATAGACGGAAGACATACACGAGCCCAATAAAGTGGC CGAGGCACCAAGGTGGAATCCCATCTCTACAGACTTCTCCGAGTCCCACA GGTAGCAAAATTATGCACTCGAGACAAGAATGCGAAAAAAGGCCAGAAGA AAAGCGATTAAGCAATATACTGACAGAAGGAAAAGAGGAAGGGTGGGGCG CCGCTACTGATGGTGCTGAGCTGTGGTTCGCATCCAGAGGTAGCGGGAGT GTGGGGTCAGATCATTCAACTGTGGCTTCGTGGGGAGTAGGAGACGAGAC AGCGGCGGGAGACATCAGGTCGGGCGTGGGAGTAACGTCAGACGACCTCG TTGCAGCCGCAGCAGTGGTAGAGTCTGACTATAGGTCCGGGAGTGCGGAA TCGGCGAGTCGCGAAGAATATGTGGACGAAGGACACCACTCCAGAAGAAC CACAGATGATCACAAGTCCAGAAAGAGGCTGGTACCATCAATCGATCTTC CGTCGCTGCCGCGCAGTGATGATATATTGTTCAGAGATATATCTTTACAC GAGATCCCGGAGGTGAGTGACGGGGTAACATATGACGATGAAGAGACGCG AAGGCTACAGCTTAAGGCCTCGGAAGTACTAACTTTGTCAGGGATGGGCT TGAACCGACTGCAACGGGAACTCACAGAGCAGGCGATCGAGAAAACGGAT TTGCGGTCCTTGAAACTCTCCAGGCAATTGTCACCTCCGACACTGGAGAG ACTCATCATTGATGAGACGGAAGCAAAGGATCCATTAGACCCAGATACCT CTTTTGATAAGTCACCGGAAGTTCCAAACGTGGAAGCAGCTGATGCAATC GTGGTGCCAACTGCTGATGGGGTGGCTGCCGTTGACATAAATCATTGTCA GATGAAGCGTCGCTCACTGCCGACTATTACCTGGGGGCCATCTGTTGTCA ACAACACGAAAACCAACATCGCCATGTCTGGTGCCATAGATGGTAGTGTC AACGGATACGAATGCAGTGAAGGCGCAGATGCGGCAGAGTCTCCGGAGTA CATACGAAGATGCTCTGTCGCGAAAACATTTTCTCCACGCGACCTCGGGT TAGGAGATGTTCAAGATAATGTGGTAGACGACGAGAGGCCAGCTGGAGCT ACGAGTGGCTGGAGGCGAGACACTATCGTTAATAAATTAAGCAAACTAGG GACAGGTCCGAGGGTCTGTGGAGATGGGCACAAAACCAGTTTGGATGAAG TCTTTGGCTTTGACGAGACACAGTCCGTGCTGGGAGATATACCTCCCGAA AGATTGTTCTCCCAAACCGGCATGTTACATCCGGACGCGCCAGTGAAGGT GGGTCATATCTTTCTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig50204:289..3857-

>mRNA_H-elongata_contig50204.12246.1 ID=mRNA_H-elongata_contig50204.12246.1|Name=mRNA_H-elongata_contig50204.12246.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3744bp|location=Sequence derived from alignment at H-elongata_contig50204:289..3857- (Himanthalia elongata Himel1 dioecious)
ACAACGGTGGGGTACGGTGACATCACGAGCGCAAGCGATCTTGAGCGAAT
CTTGGCGATTGTCGGGATGATCATCGGTGCCACAGTCTTCGGTTATATAA
TTGGTAATGTGGCGATAATATTGGAGAACTTTGACGCGATGGATTCTATC
GAAAACGGCAAGATGAGCCAGATCCAGGACTGGCTGTACGACCGGAAGAC
AACGGTGGGGTACGGTGACATCACGAGCGCAAGCGATCTTGAGCGAATCT
TGGCGATTGTCGGGATGATCATCGGTGCCACAGTCTTCGGTTATATAATT
GGTAATGTGGCGATAATATTGGAGAACTTTGACGCGATGGATTCTATCGA
AAACGGCAAGATGAGCCAGATCCAGGACTGGCTGTACGACCGGAAGTTTC
CTGCGGCACTGGCAGAAAAAATACGGCGTCAGTACCGCTACATCTTCAAG
GAGTTAAGCGTTTTTGACAGCTTTGAGATATTGAACGCGATGCCCGGGGT
CATGTCGACCTCAATGATATTCGCCCAGCATCGTTCGATCACGGTAGGGG
TGGGGTTCCTGGCGAAGCGACCCCCGGTTCTAGTCTGCCGACTGCTGCAA
AAAATGGTCCCATGCTTCGCACACTTTCCTGCGGCACTGGCAGAAAAAAT
ACGGCGTCAGTACCGCTACATCTTCAAGGAGTTAAGCGTTTTTGACAGCT
TTGAGATATTGAACGCGATGCCCGGGGTCATGTCGACCTCAATGATATTC
GCCCAGCATCGTTCGATCACGGTAGGGGTGGGGTTCCTGGCGAAGCGACC
CCCGGTTCTAGTCTGCCGACTGCTGCAAAAAATGGTCCCATGCTTCGCAC
ACAGTGGCGAAGTCTTGTACCTCGAGCATGAGATAGGGGAACACTGGTAC
ATTCTCCGCGGGGGGAAGGTTTCGTTCTACGTGACTGTCAACCTCCTGAA
GGCACAGTCCGAGGTGGTTCACATGCGGAACTTGTCCGGAGACGGGCACT
TCGGCCTTGCACCAATTCTGCTCCACGTACTCAACAGAGTGGCGAAGTCT
TGTACCTCGAGCATGAGATAGGGGAACACTGGTACATTCTCCGCGGGGGG
AAGGTTTCGTTCTACGTGACTGTCAACCTCCTGAAGGCACAGTCCGAGGT
GGTTCACATGCGGAACTTGTCCGGAGACGGGCACTTCGGCCTTGCACCAA
TTCTGCTCCACGTACTCAACAGCGAGACGGCCACCGCTACGGCAACGGCT
GACTTGCTGACGATCCGGAAGGGTGACTTGATCGATATTTTGCACCAATG
GCCGGAGATCAGGACGGAGCTTAAGCTCGAGGCAGAGGGTTATTTTCATG
AGATCAAGGTCAGCAGGGAAAAGCCAAGTGCGAGACGGCCACCGCTACGG
CAACGGCTGACTTGCTGACGATCCGGAAGGGTGACTTGATCGATATTTTG
CACCAATGGCCGGAGATCAGGACGGAGCTTAAGCTCGAGGCAGAGGGTTA
TTTTCATGAGATCAAGGTCAGCAGGGAAAAGCCAAGTGGTGGAATCCCAT
CTCTACAGACTTCTCCGAGTCCCACAGGTAGCAAAATTATGCACTCGAGA
CAAGAATGCGAAAAAAGGCCAGAAGAAAAGCGATTAAGCAATATACTGAC
AGAAGGAAAAGAGGAAGGGTGGGGCGCCGCTACTGATGGTGCTGAGCTGT
GGTTCGCATCCAGAGGTAGCGGGAGTGTGGGGTCAGATCATTCAACTGTG
GCTTCGTGGGGAGTAGGAGACGAGACAGCGGCGGGAGACATCAGGTCGGG
CGTGGGAGTAACGTCAGACGACCTCGTTGCAGCCGCAGCAGTGGTAGAGT
CTGACTATAGGTCCGGGAGTGCGGAATCGGCGAGTCGCGAAGAATATGTG
GAATCCCATCTCTACAGACTTCTCCGAGTCCCACAGGTAGCAAAATTATG
CACTCGAGACAAGAATGCGAAAAAAGGCCAGAAGAAAAGCGATTAAGCAA
TATACTGACAGAAGGAAAAGAGGAAGGGTGGGGCGCCGCTACTGATGGTG
CTGAGCTGTGGTTCGCATCCAGAGGTAGCGGGAGTGTGGGGTCAGATCAT
TCAACTGTGGCTTCGTGGGGAGTAGGAGACGAGACAGCGGCGGGAGACAT
CAGGTCGGGCGTGGGAGTAACGTCAGACGACCTCGTTGCAGCCGCAGCAG
TGGTAGAGTCTGACTATAGGTCCGGGAGTGCGGAATCGGCGAGTCGCGAA
GAATATATCCCGGAGGTGAGTGACGGGGTAACATATGACGATGAAGAGAC
GCGAAGGCTACAGCTTAAGGCCTCGGAAGTACTAACTTTGTCAGGGATGG
GCTTGAACCGACTGCAACGGGAACTCACAGAGCAGGCGATCGAGAAAACG
GATTTGCGGTCCTTGAAACTCTCCAGGCAATTGTCACCTCCGACACTGGA
GAGACTCATCATTGATGAGACGGAAGCAAAGGATCCATTAGACCCAGATA
CCTCTTTTGATAAGTCACCGGAAGTTCCAAACATCCCGGAGGTGAGTGAC
GGGGTAACATATGACGATGAAGAGACGCGAAGGCTACAGCTTAAGGCCTC
GGAAGTACTAACTTTGTCAGGGATGGGCTTGAACCGACTGCAACGGGAAC
TCACAGAGCAGGCGATCGAGAAAACGGATTTGCGGTCCTTGAAACTCTCC
AGGCAATTGTCACCTCCGACACTGGAGAGACTCATCATTGATGAGACGGA
AGCAAAGGATCCATTAGACCCAGATACCTCTTTTGATAAGTCACCGGAAG
TTCCAAACATGAAGCGTCGCTCACTGCCGACTATTACCTGGGGGCCATCT
GTTGTCAACAACACGAAAACCAACATCGCCATGTCTGGTGCCATAGATGG
TAGTGTCAACGGATACGAATGCAGTGAAGGCGCAGATGCGGCAGAGTCTC
CGGAGTACATACGAAGATGCTCTGTCGCGAAAACATTTTCTCCACGCGAC
CTCGGGTTAGGAGATGTTCAAGATAATGTGGTAGACGACGAGAGGCCAGC
TGGAGCTACGAGTGGCTGGAGGCGAGACACTATCGTTAATAAATTAAGCA
AACTAGGGACAGGTCCGAGGGTCTGTGGAGATGGGCACAAAACCAGTTTG
GATGAAGTCTTTGGCTTTGACGAGACACAGTCCGTGCTGGGAGATATACC
TCCCGAAAGATTGTTCTCCCAAACCGGCATGTTACATCCGGACGCGCCAG
TGAAGGTGGGTCATATCTTTCTGTAGATGAAGCGTCGCTCACTGCCGACT
ATTACCTGGGGGCCATCTGTTGTCAACAACACGAAAACCAACATCGCCAT
GTCTGGTGCCATAGATGGTAGTGTCAACGGATACGAATGCAGTGAAGGCG
CAGATGCGGCAGAGTCTCCGGAGTACATACGAAGATGCTCTGTCGCGAAA
ACATTTTCTCCACGCGACCTCGGGTTAGGAGATGTTCAAGATAATGTGGT
AGACGACGAGAGGCCAGCTGGAGCTACGAGTGGCTGGAGGCGAGACACTA
TCGTTAATAAATTAAGCAAACTAGGGACAGGTCCGAGGGTCTGTGGAGAT
GGGCACAAAACCAGTTTGGATGAAGTCTTTGGCTTTGACGAGACACAGTC
CGTGCTGGGAGATATACCTCCCGAAAGATTGTTCTCCCAAACCGGCATGT
TACATCCGGACGCGCCAGTGAAGGTGGGTCATATCTTTCTGTAG
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