mRNA_H-elongata_contig4974.12184.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig4974.12184.1
Unique NamemRNA_H-elongata_contig4974.12184.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: D7FKU2_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKU2_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 5.890e-70
Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 3 
Query:   48 MLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDAWTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIIN 416
            MLAVAGHLVQQNFRLPGMLSTSA+LSFADMPNG+AALSKIPALGLFQIIAFIGFLE+GVMKQKEGSFPGDMTL GEP AWT+  D VK+QKRAIELNNGRAAQMGILGLMMHE V+NHPYIIN
Sbjct:    1 MLAVAGHLVQQNFRLPGMLSTSADLSFADMPNGLAALSKIPALGLFQIIAFIGFLEIGVMKQKEGSFPGDMTLGGEPYAWTKFSDEVKEQKRAIELNNGRAAQMGILGLMMHEAVNNHPYIIN 123
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BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.220e-66
Identity = 110/150 (73.33%), Postives = 121/150 (80.67%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI AF+GFLEL VMK  EGSFPGD T  G P A  W  + +  ++ KRAIELNNGRAAQMGIL LM+HE ++N PYIINDLLG  YTFN
Sbjct:   69 FERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.450e-66
Identity = 109/150 (72.67%), Postives = 120/150 (80.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEP--DAWTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI AFIGFLEL VMK  EGSFPGD TL G P   +W  + +  +  KRAIELNNGRAAQMGIL LM+HE ++N PY+INDLLG  Y FN
Sbjct:   32 FERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.650e-66
Identity = 109/150 (72.67%), Postives = 120/150 (80.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            FDRLRYVE+KHGRI MLAVAGHLV QN+R PG LS  A L+FADMPNGVAA+SKIP LGL QI+AFIGFLEL VMK  EGSFPGDMT+ G P A  W  + +  K  KRAIELNNGRAAQMGIL +M+HE + N PYIINDLL  PYTFN
Sbjct:   57 FDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 218 bits (556), Expect = 2.990e-66
Identity = 109/150 (72.67%), Postives = 120/150 (80.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI  FIGFLEL VMK  EGSFPGD TL G P A  W  + +  ++ KRAIELNNGRAAQMGIL LM+HE ++N PY+INDLLG  Y FN
Sbjct:   33 FERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 219 bits (559), Expect = 3.330e-66
Identity = 109/150 (72.67%), Postives = 121/150 (80.67%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEP--DAWTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI AFIGFLEL VMK  EGSFPGD TL G P   +W  + +  +  KRAIELNNGRAAQMGIL LM+HE ++N PY+INDL+G  YTFN
Sbjct:   68 FERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 5.960e-65
Identity = 108/150 (72.00%), Postives = 120/150 (80.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SA+LSFADMPNGVAALSKIP  GL QI AF+GFLEL VMK  EGSFPGD T  G P A  W  + +  +  KRAIELNNGRAAQMGIL LM+HE ++N PY+INDLLG  YTFN
Sbjct:   72 FERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.050e-64
Identity = 110/150 (73.33%), Postives = 121/150 (80.67%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEP--DAWTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI AFIGFLEL VMK  EGSFPGD TL G P   +W  + +  +  KRAIELNNGRAAQMGIL LM+HE ++N PY+INDLLG  YTFN
Sbjct:  228 FERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 215 bits (547), Expect = 1.710e-64
Identity = 108/150 (72.00%), Postives = 117/150 (78.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+KHGRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI  FIGFLEL VMK  EGSFPGD  + G P A  W  +    +  KRAIELNNGRAAQMGILG+M+HE + N PYI NDLLG  YTFN
Sbjct:   62 FERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211
[Close]
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 211 bits (537), Expect = 6.290e-63
Identity = 108/150 (72.00%), Postives = 117/150 (78.00%), Query Frame = 3 
Query:    3 FDRLRYVEIKHGRICMLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIAFIGFLELGVMKQKEGSFPGDMTLAGEPDA--WTRLPDAVKDQKRAIELNNGRAAQMGILGLMMHECVDNHPYIINDLLGFPYTFN 446
            F+RLRYVE+K GRI MLA+AGHL QQN RLPGMLS SANLSFADMPNGVAALSKIP  GL QI  FIGFLEL VMK  EGSFPGD TL G P A  W  +    +  KRAIELNNGRAAQMGIL LM+HE ++N PY+INDLLG  Y FN
Sbjct:   67 FERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4974.12184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKU2_ECTSI5.890e-7090.24Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5KCX6_9PHAE1.220e-6673.33LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A6H5JDS8_9PHAE1.450e-6672.67LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KBS3_9PHAE1.650e-6672.67LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY2.990e-6672.67Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPB_MACPY3.330e-6672.67Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE5.960e-6572.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNK6_ECTSI1.050e-6473.33Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPF_MACPY1.710e-6472.00Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
FCPC_MACPY6.290e-6372.00Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4974contigH-elongata_contig4974:1836..3950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.5
Seed ortholog evalue3.1e-47
Seed eggNOG ortholog2880.D7FWR1
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-17_001380.2
Exons3
Model size1285
Cds size402
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4974.12184.1prot_H-elongata_contig4974.12184.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig4974 1883..3114 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930819.0736418-UTR-H-elongata_contig4974:1835..18821622930819.0736418-UTR-H-elongata_contig4974:1835..1882Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4974 1836..1882 +
1691679583.736258-UTR-H-elongata_contig4974:1835..18821691679583.736258-UTR-H-elongata_contig4974:1835..1882Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4974 1836..1882 +
1622930819.1381197-UTR-H-elongata_contig4974:3114..39501622930819.1381197-UTR-H-elongata_contig4974:3114..3950Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4974 3115..3950 +
1691679583.7825873-UTR-H-elongata_contig4974:3114..39501691679583.7825873-UTR-H-elongata_contig4974:3114..3950Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig4974 3115..3950 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930819.0931535-CDS-H-elongata_contig4974:1882..21581622930819.0931535-CDS-H-elongata_contig4974:1882..2158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 1883..2158 +
1691679583.7548106-CDS-H-elongata_contig4974:1882..21581691679583.7548106-CDS-H-elongata_contig4974:1882..2158Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 1883..2158 +
1622930819.1093872-CDS-H-elongata_contig4974:2577..26761622930819.1093872-CDS-H-elongata_contig4974:2577..2676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 2578..2676 +
1691679583.7640162-CDS-H-elongata_contig4974:2577..26761691679583.7640162-CDS-H-elongata_contig4974:2577..2676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 2578..2676 +
1622930819.1233196-CDS-H-elongata_contig4974:3087..31141622930819.1233196-CDS-H-elongata_contig4974:3087..3114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 3088..3114 +
1691679583.7731714-CDS-H-elongata_contig4974:3087..31141691679583.7731714-CDS-H-elongata_contig4974:3087..3114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4974 3088..3114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig4974.12184.1

>prot_H-elongata_contig4974.12184.1 ID=prot_H-elongata_contig4974.12184.1|Name=mRNA_H-elongata_contig4974.12184.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MLAVAGHLVQQNFRLPGMLSTSANLSFADMPNGVAALSKIPALGLFQIIA
FIGFLELGVMKQKEGSFPGDMTLAGEPDAWTRLPDAVKDQKRAIELNNGR
AAQMGILGLMMHECVDNHPYIINDLLGFPYTFN*
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mRNA from alignment at H-elongata_contig4974:1836..3950+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig4974.12184.1 ID=mRNA_H-elongata_contig4974.12184.1|Name=mRNA_H-elongata_contig4974.12184.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2115bp|location=Sequence derived from alignment at H-elongata_contig4974:1836..3950+ (Himanthalia elongata Himel1 dioecious)
GGTTCGACCGCCTTCGCTACGTCGAGATTAAGCATGGACGTATCTGCATG
CTGGCCGTCGCGGGACACCTCGTTCAGCAAAATTTCCGGCTGCCTGGTAT
GCTGTCGACTTCGGCGAACTTATCGTTCGCGGACATGCCAAACGGTGTCG
CGGCACTATCGAAGATTCCCGCTCTCGGGCTGTTCCAGATCATTGCCTTT
ATCGGTTTCCTGGAACTGGGAGTAATGAAGCAGAAGGAGGGCTCGTTCCC
GGGCGACATGACCCTCGCCGGCGAGCCAGATGCTTGGACCAGATTGCCCG
ACGCGGTCAAGGACCAGAAAAGGGTAAGTCGGGAAATAAATCGTCTACCG
GTACCGGCTTTACTTGAGTTTTAGCTCTACCCTCACCAATGGTAATATTA
TGAAAGTGGAGGTGTCGCCATCGATTGTAAAATCCGATTTCGTGATCATA
AAGCTGATTGCCGTCGGAGTAGTCAACACGGACTCGCATATTTTATCAGA
AGTAAGAAGTTCTAAATTGCCATTGTGGCAGATTCGCAGTTCCTAGGAAA
AAATGTTGAAACGACCGAGATACTGCTTTACCAATAGCTGGTGATGTATC
ATAAACTGCCCCGGTAGTCGTTGGATGATTTCATGCTTTTGAGCGATGCA
CCAAGCGTCAACTTTGTGCGAAGTTGATTCGAACTAATATACTTCTAGTA
ATTGATGAACTGAAGTCTCGAAGCTGTCCTATACTATCGCAGGCGATCGA
GCTCAACAACGGACGTGCGGCTCAAATGGGCATCTTGGGCCTAATGATGC
ACGAGTGCGTCGACAACCACCCGTACATCATCAACGACTTGGTGAGGGTG
GCTGCTATTTTTGTTGCTAACGATGTACAGTACAGCACTGACTTTCAGTG
GAACACTCTTGGCAGAAACTTAAATATTTTGTCGTGTGTCATTGCCATAT
ATTGTCATTCACCTGTGACGCAGCGGTTAGCTGAACCTTTTACCTATCCA
CATTACTTCTGATGCAAACCACGCTCAAGCAGAATCATACGAGCAATGCA
GCTCGAATGTGAGCGATTCGAGTTTCGCGCTGACCAATCCGCCGCCAGTG
CGGGTGACTGGTATAATGTGATGTCCTGAATGCAACGATAAAAGCTGCAT
CCTTCGAATCAAAATATTTTTTTCATTTTTGTTAATATCTTGTTCCGCCT
CCCCTTCCTTTACCCGCGCACCGTTTTTCCCCCGTTCGCTGGGTATGTAC
AGCTGGGATTCCCGTACACATTCAACTAAGACTGATTTAGTTGTCTTACG
CTACAACTGCATTGATTACATGCGGGGGATGGGCACAACACTCGTAAATG
CTTGTTTCTCTTCTGTGAAGCATCGAACCGGAGCCGTTGCTGGCGACTTA
ACGAAGCTAAATGTAGATCGTTAGGAATACAAGTTAGAGCATAGAATGAC
CAGCAGGCAGACTGCTGGCATTCGTAGGCTCGTGTCACATCGAGGAGTCG
TCTGCAGTACGACATAGACAATACTTCCGGGGTCTGATGTTGTGGACGTT
GATTTGTCTTCCTCTCAAAATAGCATAATCAGAACCAGCGGCGCTCAGTC
AGCATCGTCGGTGACCTATTGTTTCATATTAATGAATATTTGGCAACAAT
TACTGGATCGTTAACGCGTTCTGAATTCACGAGCTTGGCGATGTTATTAT
CCCCAATTTTCAGCCCCCACTAAAACTACCGTAGAGTATAAAAGAACGAG
AAACCACCTGTGAAGGGGAAGCAGCGTTTCGGAGTAATACTAATAATAGT
TCTACTCGAAAGAAAATTGGAATTAGTTCATGGGGGGGGGGTTAAATGCC
AAGAACATGGTGCGGCCCCGCGAGGACTGCCCTTGCGATCCATAGTGCTG
GACTCCCGAGAGGTGAAATGTGTATCTCACGCTTTAAATCCCTGGCAGCA
TACTCGTTGATTGTGGCCTATGACCCTCTAACGGCCTCTCTATGGATATC
GACACACACTCGCCGTAAACCACTTGCGAGCGGGTCTCCTGGGGTCAAAT
CAATACAAGCCTCGAAGTAAAAACAAGCCTTAGGTAACTGCAATAACTCC
ACAAAAATAAGGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig4974:1836..3950+

>mRNA_H-elongata_contig4974.12184.1 ID=mRNA_H-elongata_contig4974.12184.1|Name=mRNA_H-elongata_contig4974.12184.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at H-elongata_contig4974:1836..3950+ (Himanthalia elongata Himel1 dioecious)
ATGCTGGCCGTCGCGGGACACCTCGTTCAGCAAAATTTCCGGCTGCCTGG
TATGCTGTCGACTTCGGCGAACTTATCGTTCGCGGACATGCCAAACGGTG
TCGCGGCACTATCGAAGATTCCCGCTCTCGGGCTGTTCCAGATCATTGCC
TTTATCGGTTTCCTGGAACTGGGAGTAATGAAGCAGAAGGAGGGCTCGTT
CCCGGGCGACATGACCCTCGCCGGCGAGCCAGATGCTTGGACCAGATTGC
CCGACGCGGTCAAGGACCAGAAAAGGATGCTGGCCGTCGCGGGACACCTC
GTTCAGCAAAATTTCCGGCTGCCTGGTATGCTGTCGACTTCGGCGAACTT
ATCGTTCGCGGACATGCCAAACGGTGTCGCGGCACTATCGAAGATTCCCG
CTCTCGGGCTGTTCCAGATCATTGCCTTTATCGGTTTCCTGGAACTGGGA
GTAATGAAGCAGAAGGAGGGCTCGTTCCCGGGCGACATGACCCTCGCCGG
CGAGCCAGATGCTTGGACCAGATTGCCCGACGCGGTCAAGGACCAGAAAA
GGGCGATCGAGCTCAACAACGGACGTGCGGCTCAAATGGGCATCTTGGGC
CTAATGATGCACGAGTGCGTCGACAACCACCCGTACATCATCAACGACTT
GGCGATCGAGCTCAACAACGGACGTGCGGCTCAAATGGGCATCTTGGGCC
TAATGATGCACGAGTGCGTCGACAACCACCCGTACATCATCAACGACTTG
CTGGGATTCCCGTACACATTCAACTAACTGGGATTCCCGTACACATTCAA
CTAA
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