mRNA_H-elongata_contig49727.12182.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49727.12182.1
Unique NamemRNA_H-elongata_contig49727.12182.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 4.830e-104
Identity = 175/263 (66.54%), Postives = 208/263 (79.09%), Query Frame = 1 
Query:    1 VLAHRSDEIHTTMLQVSEFVCSKAWIRNKCPSIEALMRTYKLKPKVSFHIWRPVINENLMKHWFPKPGTKTEKEQKEEADANRFIQELEASIPEL--IPGLSPLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLHLIEAPQFNRYV 783
            VL HR+DE HTT+LQ  EFVCSKAWI++KCP+I+ L+ TY L+P+V FHIWRPVINENL+K WFPK GTKTE+EQ++EA A RFI ELEASI EL  +P  SPLT+KL LIFWALSL DVYIPTKKY QVV+NMN+ KRRA+ KL QAE   VT++KAE++RY  ++KT P +A+KLE EK +QS HVK+VKNKLREIKA+LF        G       E +DA+LKHLVAPR+ MGP+EAYFCSKFFNTLH IEAP FN  V
Sbjct: 1209 VLGHRADETHTTLLQAMEFVCSKAWIKSKCPAIKTLLTTYGLEPRVVFHIWRPVINENLIKCWFPKAGTKTEREQRDEAIAKRFIGELEASITELSIVPECSPLTSKLILIFWALSLPDVYIPTKKYAQVVTNMNEAKRRADSKLQQAEEEGVTMSKAERSRYMLDRKTSPAVAAKLETEKGSQSAHVKRVKNKLREIKASLFAAKDKHETG------AETIDAVLKHLVAPRMGMGPEEAYFCSKFFNTLHAIEAPNFNSLV 1465
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: A0A0U9HNT5_KLENI (THO complex subunit 2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HNT5_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 4.080e-8
Identity = 77/302 (25.50%), Postives = 126/302 (41.72%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVCS---KAWIRNKCPSIEALMRTYKLKPKVSFHIWRPVINENLMKHWFPKPGTKTEKEQK-------------EEADANRFIQEL---------------EASIPELIPGLSPLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKN---------KLREIKA--------TLFXXXXXXXVGDGRRMDTE-----AVDAILKHLVAPRLSMGPDEAYFCSKFFNTLHLIEAP 765
            D +H   +Q+ E++     +A   +  P +  L+ +Y L+P+++  I+RPV+ +  +K   P P      E               E AD N+   +L                   P     +SPL   L+L FW+LSLSD+Y+P  +Y   +S + K ++ A+    +AE    +LT +++ +   E K      + LE E A Q + V+ VK          ++R  KA         L          DGR  D       A+    +  + PR+++   +A FC  F N LH I AP
Sbjct:  870 DMLHKIFIQLYEYLVKAVPEAEFASLVPPLNELVHSYHLEPELAMLIYRPVLQDLKLK---PAPKLARPSEANGDALEEAVTDWTTEPADDNQLAVKLGDVTLTWKSLLGTVQSFHAPATWHIMSPL---LYLRFWSLSLSDIYVPKARY---LSEIEKVQKAAKDAAKEAE----SLTGSDQKKRDREAKFLRDTVTNLENELAAQEKTVEAVKQILIREKDQWQIRHKKAGDRASTERVLSDQACGDRAADGRPTDDPPEKRTAISDFFQTCIFPRVTLSLPDALFCFHFLNLLHEINAP 1158
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: A0A1W0WG42_HYPDU (THO complex subunit 2 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WG42_HYPDU)

HSP 1 Score: 62.0 bits (149), Expect = 3.180e-7
Identity = 65/269 (24.16%), Postives = 115/269 (42.75%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVCS---KAWIRNKCPSIEALMRTYKLKPKVSFHIWRPVI-------NENLMKHWFPKPGTKTEKEQK--EEADANRFIQELEASIPELIPGLSP-----LTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLHLIEAPQFN 774
            D  H T++Q   F+ +   K+      PS+E L+R Y +  + S  + R V         E+  K      GT   +  K  +E  +  F   + + +  + P ++      ++ + +++FW LSL D+Y+P   Y Q V  +       ++  A A+ G+  L K  K R   E      +  KL+ E + Q QHV+ ++N L E K   F           +   ++ V   L+  V PR +    +A F + F ++LH +    F+
Sbjct:  804 DMCHDTLVQYGTFLATNLTKSEYEKTFPSLEVLIRVYNIPFETSIFLLRSVYWNEITTEIEHFKKQEKIPDGTLNGEHFKLVQEKFSKTFDNVITSVVDLITPVMTQAPMEDISLRFYVLFWFLSLYDLYVPVAVYEQEVEKLQ------QVVAAAADPGDEDLGKEIKRRK--ESTRAQIVIEKLQEEMSVQKQHVQMLRNHLAEEKDRWFQ--------SAKSNKSDVVSQFLQMCVLPRSTFSTIDALFSAHFISSLHELRTQNFS 1056
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: F1KR79_ASCSU (THO complex subunit 2 n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KR79_ASCSU)

HSP 1 Score: 60.1 bits (144), Expect = 1.370e-6
Identity = 63/261 (24.14%), Postives = 111/261 (42.53%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVCSKAW---IRNKCPSIEALMRTYKLKPKVSFHIWRPVINENLMKHWFPKPGTKTEKE-QKEEADANRF-----------IQELEASIPELIPGL--SPLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLH 750
            D+    ++Q   F+ S        ++  S+  L+  Y L    +F + RP     +   +        E +  K + D NR            + +LE  +  L+P    + ++AK+F+IFWAL++ D+ +P   Y + +  +    RR+   LA+        T+  KT+ + E++   G+  KL  E   Q +HV++V + LR  K  LF        G         +   L+H V PR      +A +C+ F + LH
Sbjct:  761 DQCQEALVQFGSFIRSNLRQDEYSSRIMSVPELISRYYLSTDAAFFLCRPSFMHRVYNAFDKCRRALRESDGSKTKLDTNRKFAIFKSAFDEELSDLEQKLVHLLPEALWADISAKVFVIFWALTMYDISVPKAAYEREIQRV----RRSFASLAEN-------TEISKTKRSKEEEQLRGVEKKLSDELKRQGEHVERVLSILRHDKELLFADCAPNMRG-------MQMARFLQHCVLPRAIFTDIDAVYCAHFVHLLH 1003
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: A0A158R5S7_9BILA (THO complex subunit 2 n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A158R5S7_9BILA)

HSP 1 Score: 58.9 bits (141), Expect = 3.300e-6
Identity = 69/264 (26.14%), Postives = 116/264 (43.94%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVCSKAWIRN-----KCPSIEALMRTYKLKPKVSFHIWRPV-------INENLMKHWFPKPGTKTEKE--QKEEADANRFIQ---ELEASIPELIPGLS--PLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLHL 753
            D+   T++Q   F+ S   IRN     + PS+  L+  + L    +F + RP        + +   K      G+K + +  QK E     F +   ELE +   L+P ++   ++ K+F+IFW L+L D+YIP   Y   +  + K+          A +  V L+K   TR   E++   G   KL  E   Q++HV+++ N LR  K   F        G         +   L+H + PR      +A +C+KF + +H+
Sbjct:  764 DKCQETLVQFGSFLRSN--IRNEEYLNRMPSLCELISRFHLTTDAAFFLSRPTFMPRIYSLFDKARKALRDPDGSKVKLDGTQKFELFKKCFDEVFGELEKTAVPLLPEVAWTDISPKVFMIFWGLTLYDIYIPKGGYENEMVKVRKS--------ISALQENVDLSK---TRRAKEEEQLKGTEKKLGEELKRQTEHVERILNILRIDKERFFAECHPKLRG-------MQMAHFLQHCILPRAVFTDVDAAYCAKFVHLMHV 1007
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: A0A0F4ZKP1_9PEZI (THO complex subunit 2 n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZKP1_9PEZI)

HSP 1 Score: 58.9 bits (141), Expect = 3.450e-6
Identity = 64/261 (24.52%), Postives = 108/261 (41.38%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVC---SKAWIRNKCPSIEALMRTYKLKPKVSFHIWRPVINENLMKHWFPKPGTKTEKE-QKEEADANRFIQELEASIPELIPGL-------------SPLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLH 750
            D+ H  ++Q  +F+     +    +  PSI  LM+ YKL   ++F + RP +  ++     PKP    E +   + AD ++ +      + E +  L             S +T + F  FWAL +SDVY+P  +Y +  S       RA  +  +  +    +T A  ++   + K    LAS+L  EK        K++  L E     F        G        A DA+++  + PRL + P +A F  +    LH
Sbjct: 1110 DDSHQVLIQYLDFLTYNLPRESFVSLTPSIGVLMKKYKLDASLAFMVGRPGLLFDI-----PKPDFSPESDGDVDMADVSKALPGSNNVVYETLKPLIFDVETAKEPDFWSCITPEFFTTFWALQMSDVYVPENRYEKEYS-------RAVSQSRELSKDRSDMTHAGISKRAEKMKAVTDLASQLSAEKKQHKLAFIKIRQGLIERVNCWFGGSVTAPHG--------ASDALIEQCLLPRLLLSPADADFAHRILRFLH 1350
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BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Match: A0A0N4V0A7_ENTVE (THO complex subunit 2 n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V0A7_ENTVE)

HSP 1 Score: 58.5 bits (140), Expect = 4.400e-6
Identity = 72/282 (25.53%), Postives = 120/282 (42.55%), Query Frame = 1 
Query:   19 DEIHTTMLQVSEFVCSKAWIRN-----KCPSIEALMRTYKLKPKVSFHIWRPVIN-------ENLMKHWFPKPGTKT--EKEQKEEADANRFIQ---ELEASIPELIPGLS--PLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGEVTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATLFXXXXXXXVGDGRRMDTEAVDAI-------------------LKHLVAPRLSMGPDEAYFCSKFFNTLH 750
            D+   T++Q   F+ S   IRN     + P +  L+  + L    +F++ RP          +   K      G+KT  +  QK E    RF +   ELE +I  L+P ++   +++K+F+IFW L+L D+YIP   Y   +  + K        L    +  + L+K   TR   E++    L  KL  E   Q++HV++V   L+  K +LF          G  +   A  ++                   L+H + PR      +A +C+KF + LH
Sbjct:  754 DKCQETLVQFGSFLRSN--IRNEEYSSRMPPLTELISRFHLPTDAAFYLSRPTFMPRVYTCFDKTRKAMREPDGSKTKLDNSQKFELFKKRFNEIFGELEQAIVPLLPEVAWTDISSKVFMIFWGLTLYDIYIPKGAYENEMLRVKK--------LMAGLQDNIELSK---TRRAKEEEQLRTLEKKLSDELKRQTEHVERVLAILKLEKESLFSECHPSTFVAGVAVVIIASVSVSHSENVFLLELRGMQMAHFLQHCILPRAVFTDVDAAYCAKFVHLLH 1022
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49727.12182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LD24_ECTSI4.830e-10466.54THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A0U9HNT5_KLENI4.080e-825.50THO complex subunit 2 n=1 Tax=Klebsormidium nitens... [more]
A0A1W0WG42_HYPDU3.180e-724.16THO complex subunit 2 n=1 Tax=Hypsibius dujardini ... [more]
F1KR79_ASCSU1.370e-624.14THO complex subunit 2 n=1 Tax=Ascaris suum TaxID=6... [more]
A0A158R5S7_9BILA3.300e-626.14THO complex subunit 2 n=1 Tax=Syphacia muris TaxID... [more]
A0A0F4ZKP1_9PEZI3.450e-624.52THO complex subunit 2 n=1 Tax=Thielaviopsis punctu... [more]
A0A0N4V0A7_ENTVE4.400e-625.53THO complex subunit 2 n=1 Tax=Enterobius vermicula... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49727contigH-elongata_contig49727:257..3890 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.8e-91
Seed eggNOG ortholog2880.D8LD24
Preferred nameZC3H13
KEGG koko:K12837,ko:K12879
KEGG Pathwayko03013,ko03040,map03013,map03040
KEGG ModuleM00405,M00406
GOsGO:0001510,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016071,GO:0016556,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034641,GO:0034708,GO:0036396,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045293,GO:0046483,GO:0050789,GO:0050793,GO:0051239,GO:0065007,GO:0070013,GO:0071704,GO:0080009,GO:0090304,GO:1901360,GO:1902494,GO:1990234,GO:2000036
EggNOG free text desc.mRNA transport
EggNOG OGsKOG1874@1,KOG1874@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTHO complex, subunitTHOC2, C-terminal
Ec32 orthologEc-11_000130.1
Exons6
Model size783
Cds size783
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49727.12182.1prot_H-elongata_contig49727.12182.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49727 257..3890 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930818.73321-CDS-H-elongata_contig49727:256..3761622930818.73321-CDS-H-elongata_contig49727:256..376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 257..376 -
1691679583.5779748-CDS-H-elongata_contig49727:256..3761691679583.5779748-CDS-H-elongata_contig49727:256..376Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 257..376 -
1622930818.7558997-CDS-H-elongata_contig49727:799..9621622930818.7558997-CDS-H-elongata_contig49727:799..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 800..962 -
1691679583.5907414-CDS-H-elongata_contig49727:799..9621691679583.5907414-CDS-H-elongata_contig49727:799..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 800..962 -
1622930818.7866018-CDS-H-elongata_contig49727:1363..15191622930818.7866018-CDS-H-elongata_contig49727:1363..1519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 1364..1519 -
1691679583.603665-CDS-H-elongata_contig49727:1363..15191691679583.603665-CDS-H-elongata_contig49727:1363..1519Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 1364..1519 -
1622930818.8093126-CDS-H-elongata_contig49727:2461..25951622930818.8093126-CDS-H-elongata_contig49727:2461..2595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 2462..2595 -
1691679583.614073-CDS-H-elongata_contig49727:2461..25951691679583.614073-CDS-H-elongata_contig49727:2461..2595Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 2462..2595 -
1622930818.8274717-CDS-H-elongata_contig49727:3061..31631622930818.8274717-CDS-H-elongata_contig49727:3061..3163Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 3062..3163 -
1691679583.6252816-CDS-H-elongata_contig49727:3061..31631691679583.6252816-CDS-H-elongata_contig49727:3061..3163Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 3062..3163 -
1622930818.8573997-CDS-H-elongata_contig49727:3782..38901622930818.8573997-CDS-H-elongata_contig49727:3782..3890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 3783..3890 -
1691679583.6472135-CDS-H-elongata_contig49727:3782..38901691679583.6472135-CDS-H-elongata_contig49727:3782..3890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49727 3783..3890 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49727.12182.1

>prot_H-elongata_contig49727.12182.1 ID=prot_H-elongata_contig49727.12182.1|Name=mRNA_H-elongata_contig49727.12182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
VLAHRSDEIHTTMLQVSEFVCSKAWIRNKCPSIEALMRTYKLKPKVSFHI
WRPVINENLMKHWFPKPGTKTEKEQKEEADANRFIQELEASIPELIPGLS
PLTAKLFLIFWALSLSDVYIPTKKYGQVVSNMNKTKRRAEIKLAQAERGE
VTLTKAEKTRYTYEKKTCPGLASKLEVEKATQSQHVKKVKNKLREIKATL
FTVFTVFTVGDGRRMDTEAVDAILKHLVAPRLSMGPDEAYFCSKFFNTLH
LIEAPQFNRYV
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mRNA from alignment at H-elongata_contig49727:257..3890-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49727.12182.1 ID=mRNA_H-elongata_contig49727.12182.1|Name=mRNA_H-elongata_contig49727.12182.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3634bp|location=Sequence derived from alignment at H-elongata_contig49727:257..3890- (Himanthalia elongata Himel1 dioecious)
GTATTGGCCCACCGGTCGGATGAGATTCACACCACCATGCTGCAAGTATC
AGAATTCGTATGTTCGAAGGCCTGGATAAGGAACAAGTGCCCCAGCATAG
AAGCCCTGGTGAGAATTTAGCATAGAACTTAGCGAAGAAACAGTTAGGGG
AATGGATTTAGCGTGGTACAGTATTTGATTGGGCGTGATAATTCTGATTA
CTTTTAAGAGAGTAGAGGTGGAATTTAAAACTTACAATTTATAAGTTGTC
CAAGTAACCGAACTGTACGGCTGGATTGTATTGTATTGTATTGGATCGTA
CGGTCTACGTACTGTACTATAGCTGACTAGTTCTTGGTGTGTCGCCCTAG
TTCTTGGTGTGATATATATTGATATTGATATATATTGATGTTGATGTTAT
TGCAGATACAAAATACAACCAGAGAGTGTGAATTAATGTTTGAGTGAGTG
AAATAATGAATCGGTCATCAACGACAAGATCAGCAGCGGACAAGGCAATG
TAAGGTAATATAATGTTTAGGGTTAGGGTTAGGGTTAGCCGGCATCGCGA
TAAAGAGACGTTTTGGAGCAGAGGGGCTGCGGAGAAGACCCTCGAGGTCG
GGATTAACTGATGTATATAGTACAGTATTTTATTTTAAAACTTTGAACTC
ATTCCAACCCTCCGATTATATGGCTTAAAGTTCGGTAATTGCCGGTAACT
ACCGTAACCTCAAATCGATATTGACAGATGAGGACTTACAAGCTCAAGCC
TAAAGTGTCCTTTCACATCTGGCGACCGGTGATCAACGAGAACCTCATGA
AGCACTGGTTCCCCAAGCCAGGAACCAAGGTTAGGTGTACTCAGTAGTAT
TTTGTTAGGGTTAGGGTTAGTGTCACGGTTGAGCGACGGTCGCGCGCTTG
TAAAGTGAACCAGTCTCATACTGTGGCAAGTGAACCAGTCCCGGTACTCT
AACCCTAACCCTAACCCTATTGATAGGCCTGTAAAGTGACTGCTGTGAGC
GCTGTGACTGCTGTGAGCGCCTGAGTGCTGTGACTGCTGTGATTGCTTGG
TTCATGATGAACCACTGTACGATACATAAGAGATAGAGGCAGATACAGTT
TTCCCTCCCCTCCCCTCCCCTCCCCTCATTCATTGCCGTATAACCCTAAC
CCATTTAACGCATTTAACGCATTTGACGCTGTAGTCTGTTTGCTACCCTC
ATGTATGTAGCATGTACCACGCGTGATGTACATCATTGCCCGAACTCCCG
CTCTCTTCTCTCTCTAACCATGACCCTAACCCTAACTGCCCCAAGACGGA
GAAAGAGCAGAAAGAGGAAGCCGATGCCAATCGTTTCATCCAGGAACTGG
AGGCCTCCATTCCCGAGCTGATTCCTGGCCTTAGCCCGCTCACCGCCAAG
CTATTTCTTATCTTCTGGGCGCTTTCTCTGTGAGTATTGAGTATTGAGTA
TCGTGCTGACTGTTGACTGTTGCAGGTACTGCTACTCCTGCAGTACTGCA
GTACATTAGGGTTAGGGTTAGGGTTAGTACTCTACTGTACATGCCCCACA
TTGAGGATCTGAGGATAGTGTACTGGTATTGTGTTGTGCTAATAGTATAG
TGTTGCAGTGTTAATAGTATAGTGTACCGGTATTGTGTTAATAGTATAGT
GTACCGGTATTGTGTTCTGCTAATAGTATAATAGTCTTTTGGTGTAGTGT
TGTGCTAATAGTATAGTCTTTTGGTATAGTGTTGCAGTGTTATTAGTATA
GTCTTCTGGTATAGTGTTGCAATGTTAATAGTATAGTGTTTTCGGCAGCC
GTCTTCTGGTTTTGTGCTGCAGTGTTTGTGCTCTAAACACAAGTCGGATG
GTCGATGGTGCTTAGTTCAATGCCAATTGAGCTGCTGGGCTCCACTAACC
GATTTCAATTTTGACCGTATCCGTGTGAGTATAGTATAGAGTGTGGATGT
TCGGAGGGTTGGAATGAGTTCAAGTTTTTTTTAATAACAATAGTATAGTA
GTCCTTTCTTGGAGAGGAAGGGGAAACATTGATTAAAATATATCTGAAGT
CAATCACACCCTAACCCTCACCCTCACCCTAACCCTAACATACATGTCTT
CTTTACACCATAAAATGCTAACTAAGGTAATAATGTACCATACTGTTATT
GAGTACTATTAATAGTACTATTATTAGTATCGGTGACATAAAGCGAGATG
GATGGAATAGCAGTGTAACCCTAACCCTAACCCCGATGGACGGACATGAA
GTAAATCAAACAAGACTCGTATTGTGCTCTCTCTAACCCTAACCCTAACT
TTAACCCTAACTCTAACCCTAACTCTAACGGTGTCCCAAATGGTGATGAT
GGTAATCGTAATCGTAATCAGGTCGGACGTTTACATTCCGACCAAGAAGT
ACGGGCAGGTGGTGTCTAACATGAACAAGACCAAGCGGAGAGCAGAGATA
AAGCTGGCACAGGCCGAGAGGGGCGAGGTGACGCTCACTAAGGCCGAGAA
GACTCGATATACCTACGAGAAGAAGACGTGAGGGTTGACTTAAGACATTG
AACCCTCTGGGAGAAAGCCAAGCTACGCGAAACCCTGGAAAAACGCTCTC
TTCCGTGAAACCCTCCTAGAATGCTGTATAAAGCTACAGTAGTGGATGTG
GTTTTGAGCTGTAGGTGTAACCCTAACTGTAGCCCCAACCCTAGCCCTAA
CTGTAACCCTAGCCCTAGCCCTAATCTTTACGCGATGTATCGTTTGAATG
TACTCTTTTTGGGTGTTCTGCGTAATTACCTCTAGTGTGAACCTTTTGGG
GATATATCCTTTTTCTAATGTGTGTGATTTTTTATATACATATCTCGCGA
GGGAGCTTTTTTGTACCTTCCCATACATTTTTTGTATGCGTTTTTTGCTT
CATAATTATTTTTATTTTATTCTGGAAGGTGTCCCGGTCTAGCGTCCAAG
CTTGAGGTGGAAAAGGCGACACAAAGCCAGCACGTCAAAAAGGTTAAGAA
TAAACTCCGGGAGATCAAGGCGACCCTGTTCACGGTGTTCACTGTGTTCA
CTGTCGGGGACGGAAGGCGCATGGACACGGAAGCCGTGGATGTGAGTACA
TTGCTATTAATTCTAATAGTACTATTAATAGTACTACTAAGAACAATTCT
AAGTGGTAGTAAGTAGTAATAGTCTAACGTGGTAAAGTTTAAATATGAAA
ACATCCTGTGATATTTTGTATAGAGAGAGCTTTTGCCCCCAATTATAGGA
TGTTACAAAACAATTTATTATTTATTTTATCGTGGTTCATTGCGATTGGG
TTAGAGTTAGGGTTAGGGTTGGCCGATTGCTGTCGACATGCATGTATCGA
GATCATCCAGAGATCGCCTGCCTGTACAGTATTGATGCAATGCAAAGTCT
GCTGTATTGTGATCTGAATGATGTGTTGTGATGTGAAGCGATCTTTGACT
GGGTTAGGCTGGACTTCGAAGGTGCTTTGTTTTTTTGTTGCCTTTATTTT
TTTATGCTATTTAGGCTATCCTGAAGCATTTGGTGGCGCCTCGTCTCTCA
ATGGGGCCCGACGAGGCTTATTTCTGCTCCAAGTTTTTCAACACGCTCCA
CTTGATAGAGGCTCCGCAATTCAACAGGTATGTA
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Coding sequence (CDS) from alignment at H-elongata_contig49727:257..3890-

>mRNA_H-elongata_contig49727.12182.1 ID=mRNA_H-elongata_contig49727.12182.1|Name=mRNA_H-elongata_contig49727.12182.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1566bp|location=Sequence derived from alignment at H-elongata_contig49727:257..3890- (Himanthalia elongata Himel1 dioecious)
GTATTGGCCCACCGGTCGGATGAGATTCACACCACCATGCTGCAAGTATC
AGAATTCGTATGTTCGAAGGCCTGGATAAGGAACAAGTGCCCCAGCATAG
AAGCCCTGGTATTGGCCCACCGGTCGGATGAGATTCACACCACCATGCTG
CAAGTATCAGAATTCGTATGTTCGAAGGCCTGGATAAGGAACAAGTGCCC
CAGCATAGAAGCCCTGATGAGGACTTACAAGCTCAAGCCTAAAGTGTCCT
TTCACATCTGGCGACCGGTGATCAACGAGAACCTCATGAAGCACTGGTTC
CCCAAGCCAGGAACCAAGATGAGGACTTACAAGCTCAAGCCTAAAGTGTC
CTTTCACATCTGGCGACCGGTGATCAACGAGAACCTCATGAAGCACTGGT
TCCCCAAGCCAGGAACCAAGACGGAGAAAGAGCAGAAAGAGGAAGCCGAT
GCCAATCGTTTCATCCAGGAACTGGAGGCCTCCATTCCCGAGCTGATTCC
TGGCCTTAGCCCGCTCACCGCCAAGCTATTTCTTATCTTCTGGGCGCTTT
CTCTACGGAGAAAGAGCAGAAAGAGGAAGCCGATGCCAATCGTTTCATCC
AGGAACTGGAGGCCTCCATTCCCGAGCTGATTCCTGGCCTTAGCCCGCTC
ACCGCCAAGCTATTTCTTATCTTCTGGGCGCTTTCTCTGTCGGACGTTTA
CATTCCGACCAAGAAGTACGGGCAGGTGGTGTCTAACATGAACAAGACCA
AGCGGAGAGCAGAGATAAAGCTGGCACAGGCCGAGAGGGGCGAGGTGACG
CTCACTAAGGCCGAGAAGACTCGATATACCTACGAGAAGAAGACGTCGGA
CGTTTACATTCCGACCAAGAAGTACGGGCAGGTGGTGTCTAACATGAACA
AGACCAAGCGGAGAGCAGAGATAAAGCTGGCACAGGCCGAGAGGGGCGAG
GTGACGCTCACTAAGGCCGAGAAGACTCGATATACCTACGAGAAGAAGAC
GTGTCCCGGTCTAGCGTCCAAGCTTGAGGTGGAAAAGGCGACACAAAGCC
AGCACGTCAAAAAGGTTAAGAATAAACTCCGGGAGATCAAGGCGACCCTG
TTCACGGTGTTCACTGTGTTCACTGTCGGGGACGGAAGGCGCATGGACAC
GGAAGCCGTGGATGTGTCCCGGTCTAGCGTCCAAGCTTGAGGTGGAAAAG
GCGACACAAAGCCAGCACGTCAAAAAGGTTAAGAATAAACTCCGGGAGAT
CAAGGCGACCCTGTTCACGGTGTTCACTGTGTTCACTGTCGGGGACGGAA
GGCGCATGGACACGGAAGCCGTGGATGCTATCCTGAAGCATTTGGTGGCG
CCTCGTCTCTCAATGGGGCCCGACGAGGCTTATTTCTGCTCCAAGTTTTT
CAACACGCTCCACTTGATAGAGGCTCCGCAATTCAACAGGTATGTAGCTA
TCCTGAAGCATTTGGTGGCGCCTCGTCTCTCAATGGGGCCCGACGAGGCT
TATTTCTGCTCCAAGTTTTTCAACACGCTCCACTTGATAGAGGCTCCGCA
ATTCAACAGGTATGTA
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