mRNA_H-elongata_contig49702.12178.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A6H5KZT2_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZT2_9PHAE) HSP 1 Score: 154 bits (389), Expect = 3.360e-42 Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVEGKPVQ 342
MMTEFKDQGESD KI++MITKENF KY+E+VRKNVTRGL+ SL+ THIAEKE L ++ +VDD++D +RAQAKGQE DEAK RD IEA+LE+ +VLDWI++RS IT++ KPV+
Sbjct: 403 MMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKARDKIEAQLEREMVLDWIDDRSKITWLPAKPVE 516
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A836CEY7_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY7_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.660e-24 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 MMTEFKDQG-ESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVEGKP 336
MM + K QG SDE+++ MIT ENF+KY +I R + T+ L SL ++ IAEKE L+ +P +VDD+++ +RA+AKG+ DEA R+ +EA LEK +VL WI ERSTI Y E P
Sbjct: 345 MMADMKAQGTHSDEELRGMITPENFNKYKDIARGSTTKQLQVSLALSDIAEKEGLQVNPLEVDDQMELLRAEAKGEPFDEAAARERVEATLEKEMVLQWIAERSTINYTEVAP 457
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A6T5LN79_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LN79_HETAK) HSP 1 Score: 98.6 bits (244), Expect = 9.140e-22 Identity = 56/111 (50.45%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 MMTEFKDQG-ESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQ-EIDEAKVRDAIEARLEKNLVLDWIEERSTITYVE 327
MM + K +G +SDE++K MIT ENF+KY EIVR +VTRGL+AS+++ IA++E L D +V+D++ V+ QA+G DE VR IEA L+KN+VLDW+ ++ TIT+ E
Sbjct: 386 MMADMKTEGSKSDEELKEMITPENFEKYKEIVRPSVTRGLAASIILADIAKREELAIDELEVEDQLQLVKNQARGDPNFDEEGVRARIEATLQKNIVLDWLADKGTITWNE 496
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: R7Q214_CHOCR (Peptidylprolyl isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q214_CHOCR) HSP 1 Score: 95.1 bits (235), Expect = 1.500e-20 Identity = 50/114 (43.86%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYV---EGK 333
M++ FKD G SD+++K M+TKENF+ Y + + NV + L + ++ IA+++ +K D ++V+++I VRA+ KGQE++E K+RD +EA+LE++LVL +I+E +T+T V EGK
Sbjct: 372 MLSSFKDNGMSDDQVKAMVTKENFELYKKRAKGNVEKNLKVNFAVSKIAKEKDIKIDAEEVENQIALVRAELKGQEMEEEKIRDQVEAQLERDLVLKYIKETATVTLVKKEEGK 485
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A7S2G352_9STRA (Peptidylprolyl isomerase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G352_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.480e-19 Identity = 50/114 (43.86%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQA--KGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVEGKP 336
MM+EF+ QG DE+IK MITKE F+KY +I N+ + L +SL + IA KE +K D V+D++ ++AQA KG++ D+ RD IE +++++LVL+W+ ER I +V+ P
Sbjct: 386 MMSEFRAQGTPDEEIKKMITKEGFEKYKKIATPNIVKVLKSSLAVNDIANKEGIKVDKLDVEDQVALIKAQAEQKGEDFDDKTARDQIECQMQRDLVLNWLAERVEIEFVDVAP 499
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A2V3J6T1_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6T1_9FLOR) HSP 1 Score: 92.4 bits (228), Expect = 1.630e-19 Identity = 48/111 (43.24%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVEGK 333
M++ FKD+G SDE++K+M+TKEN++ Y E + NV + L + ++ IA+ ++L FD ++V++++ VRA+ KG+E+DE +VRD IEA+LE+ LVL I++ + +T V K
Sbjct: 500 MLSSFKDKGMSDEQVKSMVTKENYEMYKERAKGNVEKSLRVNFAVSQIAKDQNLAFDEKEVENQMALVRAELKGEEMDEQRVRDQIEAQLERELVLQHIKKSAKVTLVPPK 610
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A7S1XHY7_9RHOD (Peptidylprolyl isomerase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHY7_9RHOD) HSP 1 Score: 82.8 bits (203), Expect = 3.340e-16 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYV 324
MMT+FK QG D ++K MI EN++KY + R NV R L S IAE E + Q+++D+I VRA+ KG+E+DE K+R+++EA L + VL+ I + IT V
Sbjct: 332 MMTDFKQQGMDDAQVKAMINPENYEKYAKNARPNVIRALKLSFAHARIAEVEGMAPTAQEIEDQITLVRAELKGEEVDEEKLRESVEAELTREKVLELIRSSAKITMV 439
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: H6WB92_VAULI (Peptidylprolyl isomerase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB92_VAULI) HSP 1 Score: 82.4 bits (202), Expect = 4.600e-16 Identity = 42/94 (44.68%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 1 MMTEFKDQGESDE-KIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKN 279
MM + K QG+ D+ +++ MIT ENF+KY E+VR++ T+ L SL ++ IAEKE ++ D +++D+++ +RA+ KG+E DEA ++ IEA L+KN
Sbjct: 345 MMADMKSQGQQDDAELRKMITPENFNKYKEVVRESTTKQLKVSLALSMIAEKEGIELDQGEIEDQLELIRAEVKGEEFDEAVAKERIEATLQKN 438
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: K8Z9T8_NANGC (Peptidylprolyl isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z9T8_NANGC) HSP 1 Score: 81.6 bits (200), Expect = 9.370e-16 Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQAKGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVE 327
MM E QG+S+E++K MITKENF+KY EI + L + +AE E L+ DP ++ D+ID + +A+ Q +DE +RD +EA+L ++VLD + +++ ITYV+
Sbjct: 388 MMQEMSTQGKSEEEVKKMITKENFEKYREIAYPQTVKTLMLGVATAKVAEDEGLQVDPLELQDQIDLRKLEAERQGLDEKALRDQLEAKLLADMVLDRLADQADITYVD 496
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Match: A0A7S2DP20_9EUKA (Peptidylprolyl isomerase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DP20_9EUKA) HSP 1 Score: 80.5 bits (197), Expect = 2.500e-15 Identity = 41/111 (36.94%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 1 MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEKESLKFDPQQVDDEIDEVRAQA--KGQEIDEAKVRDAIEARLEKNLVLDWIEERSTITYVE 327
M+ + ++QG++DEK+K +IT EN+++Y +I R VT + A + + +++++ L VDDE+ ++AQA +G++ E++VR + A LEK++VL+W+E +T+T VE
Sbjct: 404 MLADMREQGQTDEKLKEIITPENYERYKKISRPMVTSTIKADMALKAVSQQQGLTVPEDSVDDEVMTLQAQALQRGEKFKESEVRPKVRASLEKSMVLNWLESHATVTIVE 514 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49702.12178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49702.12178.1 >prot_H-elongata_contig49702.12178.1 ID=prot_H-elongata_contig49702.12178.1|Name=mRNA_H-elongata_contig49702.12178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MMTEFKDQGESDEKIKNMITKENFDKYLEIVRKNVTRGLSASLLMTHIAEback to top mRNA from alignment at H-elongata_contig49702:2357..4151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49702.12178.1 ID=mRNA_H-elongata_contig49702.12178.1|Name=mRNA_H-elongata_contig49702.12178.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1795bp|location=Sequence derived from alignment at H-elongata_contig49702:2357..4151- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49702:2357..4151- >mRNA_H-elongata_contig49702.12178.1 ID=mRNA_H-elongata_contig49702.12178.1|Name=mRNA_H-elongata_contig49702.12178.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig49702:2357..4151- (Himanthalia elongata Himel1 dioecious)back to top |