mRNA_H-elongata_contig4959.12155.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: D7FKH8_ECTSI (Peptide n-glycanase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH8_ECTSI) HSP 1 Score: 639 bits (1647), Expect = 3.550e-204 Identity = 407/826 (49.27%), Postives = 484/826 (58.60%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALISARLQEERRQLEGYELIARGEDPEADREEEEGRRSGDADWIASRGEDG-VSTAIEAPSNSPQTTSPLVGAPVGQLYPGGDLALCVAAVVEGPGKAAVLVGGAPVCRSLGNTH---GTLCAGAVSSTTGFLLDARTFSLQAVGETSALMAELPEWLDDLPEGVVVAVAYGGGRASGSTATLTDELKSTLEQLLHGD---QANAAQNSFARKGEGATGLGWTLVGWKG--TGVQKWTRRQDCAA-GHGKRSALYVELLFPPPASRAGQPSTVPSPTSKSRHIELQNKMCLYPLRSLDQDHYNDQAPVPTTTLPHEGIDWPARGVCRRPGETTVSVGPTVGLVDCPGWTTILNAPEDRGEAGVACVEGGGEAS--PPVAWRVTTVVPAVGDWCSQTTPFDGTADGCPSAVVGGSP--MSPSNGTPVHLPVARVREIIVWSEQGINGVRVVYDVGGDVVYGVKEVGSFGPYRQSKLTLDVEDGEVVTEISVKTRRRIVESLSIKTNRGKDKKWGGEGGHAEQQTWSVSSGSSFLGFHGGRGDYYLQCLGVILVEHGRVTETQEGNAXXXXXXXXPYGWNGAPDIITATIPWSPVVKTGFYNTDPVSRACAQLVAFNMTSAAESLTSAG--------------------VLTALRTALKYAENLLASPRDERLSRIRLSNAFFHRKIGRLSGGGGVMRAMGFELAEDGGRMHYVFQKQGARGGLDRLRRARRVLEKLLARL 2376
+IWIPARN WVHAD CENKLDKPLMYE GWNKRLSYV+AF +DGAVDVTRRYT RW++VLSRR LVPEKWL GV+ + AAR I AR EE+R+LE YE + R + D EE+EGR+SGDA+WIASRGE G + A SP G P+ L PGG LALCVAAVVE G A+VLVGGA VCR G G +C AVS+TTG LL A TF L + +++A WLD LP+G VVAVA G A L L + L G+ + T +VG K TG ++W RRQ G G R ALY E+L PPPAS G+ + V +ELQ+K+ L PLRSL + A TTT + ARG CRR GE TVS+GP V LVDCPGWTT+L P D AG A E S PPV W VTTV PAVG T FD GCP+ V+GGSP ++ P LP RVREI+ WS +NGV+VVYDV GD V G K +G G YRQS LDVE GEV+TEISVK IV+S+ ++TN+G++K WGG GGH Q+TW V +GSSFLGFHGG G + + LGV L E G G + ++ PVVKT Y D V+RACAQ +AFN V+TAL T KYA+NLLASP D ++SRIRL+N FF RKIGRL+GGGGV+RAMGFELA++GGRMHYVF++QG GGL LRRAR+ L L A L
Sbjct: 552 EIWIPARNAWVHADACENKLDKPLMYEQGWNKRLSYVVAFGKDGAVDVTRRYTRRWLQVLSRRNLVPEKWLAGVIGSHS----AARTGTIVARFAEEQRELERYESM-RCDGDGLDNEEKEGRQSGDAEWIASRGEGGGPAGAAXXXXXXXXXASPFTGVPMAVLQPGGGLALCVAAVVERSGDASVLVGGATVCRLSGGGRVHRGAVCVAAVSATTGVLLGANTFVLGSEADSAAAA-----WLDGLPDGAVVAVATATGGQRKDQAGLGSGLTEAMLTQLFGEGSPDTDXXXXXXXXXXXXXTPTAIAVVGLKKGPTGARRWARRQHRGEDGGGGRCALYTEILLPPPAS--GRAAAV--------QVELQDKLSLCPLRSLPAE---GDAAAATTTPSAVAVSASARGTCRRAGEPTVSMGPAVDLVDCPGWTTVLQVPGDMAGAGSADDAEKEEVSAVPPVGWVVTTVHPAVGGTHEDTEEFDDGPVGCPAFVMGGSPVALTADGSAPPFLPAGRVREIVGWSGDAVNGVQVVYDVQGDAVRGPKRMGDHGLYRQSNFVLDVEGGEVLTEISVKAGA-IVDSVRVRTNKGREKTWGGAGGHL-QRTWHVPTGSSFLGFHGGVGGH-VHSLGVTLAERGGQAAGASGES---------------------SLALDPVVKTNLYAADRVARACAQFLAFNAPXXXXXXXXXXXXXXXXXXXXXXXXXXALEEVVTALETMRKYADNLLASPLDPKVSRIRLANGFFDRKIGRLAGGGGVVRAMGFELADEGGRMHYVFRRQGGGGGLGGLRRARQTLIDLAAAL 1330
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A836CB71_9STRA (Putative peptide n-glycanase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB71_9STRA) HSP 1 Score: 204 bits (520), Expect = 7.970e-50 Identity = 248/799 (31.04%), Postives = 338/799 (42.30%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALI--SARLQEERRQLEGYELIAR------GEDPEADREEEEGRRSGDADWIASRGEDGVSTAIEAPSNSPQTTSPLVGAPVGQLYPGGDLALCVAAVVEGPGKAAVLVGGAPVCRSLGNTHGTLCAGAVSSTTGFLLDARTFSLQAVGETSALMAELPEWLDDLPEGVVVAVAYG-GGRASGSTATLTDELKSTLEQLLHGDQANAAQNSFARKGEGATGLGWTLVGWKGTGVQKWTRRQDCAAGHGKRSALYVELLFPPPASRAGQPSTVPSPT-----SKSRHIELQNKMCLYPLRSLD---------------QDHYNDQAPVPTTTLPHEGIDWPARGVCRRPGETTV--SVGPTVGLVDCPGWTTILNAPEDRGEAGVACVEGGGEASPPVAWRVTTVVPAVGDWCSQTTPFD---------GTADGCPSAVVGGSPMSPSNGTPVHLPVARVREIIVW-SEQGINGVRVVYDVGGDVVYGVKEVGSFGPYRQSKLTLDVEDGEVVTEISVKTRRRIVESLSIKTNRGKDKKWGGEGGHAEQQTWSVSSGSSFLGFHGGRGDYYLQCLGVILVEHGRVTETQEGNAXXXXXXXXPYGWNGAPDIITATIPWSPVVKTGFYNTDPVSRACAQLVAFNMT--SAAESLTSAGVLTALRTALKYAENLLASPRDE-RLSRIRLSNAFFHRKIGRLSGGGGVMRAMGFEL 2265
+IW+ + W HAD CE+KLD PLMYE GW K+L+Y++A +G +DVT RYT RW V RR LVP + L LAN+ R AL S E +E EL A E P++D E EGR SGD W+ASRGEDG + A N P P GA L G A+ +AAV +GP AAV A +C S +G LL T+ G + +L L LPEG ++A A G + L + ST L D ++ AQ + +R W L+G G V W R +C +A +EL P A + + ++ + L L LD A C PG+ + V + G V PGW+T L PE G G A + WRV A G T F G G +AVV G + + LP+ V EI+ W S+ +NGV++ Y +G GV+ +G G YRQS + L+ DGE V + V+ +V+ +++ T +G+ WG + +++SV G +FLGF GG G + L LG+I V +ET A A D A +P Y+ DP RA A L+ + S+ +A A TALKYA N+L RD + SRIR NA F KIG + GG ++RA+GFEL
Sbjct: 487 EIWLSGQ--WTHADSCEDKLDSPLMYEHGWGKQLTYIVAAGTEGVLDVTPRYTRRWRHVACRRTLVPARGLAQELANINLK---IRTALAPPSREQAEAAEAVETAELQAMCLLTYDAERPKSD--EAEGRISGDRAWVASRGEDG---GMCAAGNVPL---PQAGA---SLSIG---AMTLAAVTKGPAAAAV----AAICCS----------------SGTLLFCGTYG---TGSGVSSFEQLQSDLAALPEGALIAAAAARGDNTLYLRSALAAAISSTAVPLSTADDSSDAQPASSRT--------WVLLGAAGAHVP-WAR-VNCGYSSAPVAAA-LELAVPQTAQAXXXXXXXXXXXXXXSDASALLVDTALALPLLQLPPLDLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTALSYC--PGQPVLIGEVCGSGGAVHAPGWSTTL-LPESVGVDGAAARGALPQGDDRGVWRVVETHDATGSAHDDTIAFSDADTVFPAVGADGGAAAAVVLGGSIGGA-----LLPLPHVVEILGWASDAHVNGVQLHYRIGTVRATGVRHLGDHGTYRQSAMMLN--DGEGVASVDVRAGL-LVDQVTVTTTKGRSHTWGSALTESPLRSYSVPDGHTFLGFSGGVGGH-LHSLGIITVSE---SETLAAAA--------------AAD---ADMPRFAAAVPLLYSADPARRAVAALMHLSADGGSSDSEAAAAAARIAAETALKYAANVL---RDAAKFSRIRAGNAVFAAKIGSVRGGPLLLRALGFEL 1197
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: E1ZBY3_CHLVA (TGc domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZBY3_CHLVA) HSP 1 Score: 117 bits (293), Expect = 3.210e-23 Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALISARLQEERRQLEGYELIARGEDPEADREEEEGRRSGDADWIASRGEDGVSTA 426
+ W P++ RW+H DPCE DKPL+YEAGW KRLSYV+A R G DVTRRYT+++ E SRR+LV E WL G L ++ A + + L E+R +L+ +L++ G A+ R++GDA W+A+RGEDG A
Sbjct: 207 ECWSPSQRRWMHLDPCEAAADKPLLYEAGWGKRLSYVVAVGRHGVADVTRRYTTQYDE--SRRQLVSEGWLAGYLRHVTGRLRAGLSPELRREL-EQRDELDRRQLLSSGT-AAAEEVALPARQTGDAAWLAARGEDGSGVA 344
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A2P6V6U1_9CHLO (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asp aragine amidase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V6U1_9CHLO) HSP 1 Score: 116 bits (291), Expect = 1.800e-22 Identity = 64/142 (45.07%), Postives = 83/142 (58.45%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVL----ANMGSNRPAARNALISARLQEERRQLEGYELIARGEDPEADREEEEGRRSGDADWIASRGEDG 414
+ W A+ +WVH DPCE+ DKPL+YEAGW K+LSYVLA R GA D TRRYT RW +V RR+LV E WL L A + + PA + AR + +R+ + L + G A R +GDA W+ +RGEDG
Sbjct: 1268 EAWSEAQQKWVHLDPCEDACDKPLLYEAGWGKKLSYVLAVGRHGAADATRRYTQRWADVCQRRQLVDEAWLQAALREATARLRAGLPADERQRLDARDEADRQAM----LCSAGPSA-AQLATLPARTTGDAAWLVARGEDG 1404
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A2P6TQU9_CHLSO (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asp aragine amidase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQU9_CHLSO) HSP 1 Score: 115 bits (287), Expect = 3.780e-22 Identity = 70/162 (43.21%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAA-----RNALISARLQEERRQLEGYELIARGEDPEADREEEE--GRRSGDADWIASRGEDGVSTAIEAPSNSPQTTSP 465
++W A+ WVH DPCE DKPL+YEAGW KRL+YV+A R GA DVTRRY+ + + L RR LV E WL L ++ AA R AL E R LE L A G+ + E++ GR +GDA W+A+RGEDG S ++ P + P
Sbjct: 554 EVWSEAQQCWVHLDPCEAAFDKPLLYEAGWGKRLNYVIAVGRHGATDVTRRYSRDYADTLKRRGLVLESWLADYLRSVTGRLRAALPPTERQAL------EARDALEQQSLAAAGQGLLSAEEQQALPGRTTGDAAWLAARGEDGSS--VQRPGGAAAAVPP 707
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A8J9SHN2_9CHLO (Peptide-N(4)-(N-acetyl-beta-glucosaminyl) asparagine amidase A n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SHN2_9CHLO) HSP 1 Score: 111 bits (277), Expect = 1.880e-21 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 4 IWIP----ARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALISARLQEERRQLEGYELIARGEDPEADREEEEGRRSGDADWIASRGEDGVSTAI---EAPSNSPQTTS 462
+W+ + RW+H DPCE D+PL+YE GW K+L+YV+AF +DG DVTRRYT++W E+L+RR V E WL + A A +RL E+R +E +L E P AD GR++G +W A+RGE G +T+ + PS +P+ S
Sbjct: 220 VWVEYYSESLGRWIHMDPCEAAYDQPLLYEGGWGKKLTYVVAFSKDGVKDVTRRYTAKWGELLNRRAEVSEPWLMSACHALTVRLRAQLGASERSRL-EQRNAVEDRQLSNGLEPPSADTSLP-GRQTGSVEWRAARGELGSATSASCGQTPSAAPEIAS 377
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: W7U624_9STRA (Peptide-n-(N-acetyl-beta-glucosaminyl)asparagine amidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U624_9STRA) HSP 1 Score: 111 bits (277), Expect = 7.000e-21 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWV-EVLSRRKLVPEKWLTGVLANMGSNRPAARNAL-ISARLQEERRQLEGYELIA------RGEDPEADREEEEGRRSGDADWIASRGEDGV 417
++W PA+ R++H D CEN D PLMYE GW K+LSYV+AF R+ VDV+RRYT + E+LSRR+ VPE+ L +A++ N+ RN L + R +ER + E +EL + G E +GR SGDA W +RGEDG
Sbjct: 410 EVWSPAQERFIHLDSCENAADTPLMYEGGWGKKLSYVIAFGRNHCVDVSRRYTRNFENEMLSRRQSVPEQILIQQIASL--NQQLCRNGLSVPVRQSQERMRQEQFELHSLTVLKDAGGGMNIKASERQGRISGDAAWKRARGEDGA 554
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A2P6R604_ROSCH (Putative peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6R604_ROSCH) HSP 1 Score: 110 bits (274), Expect = 8.510e-21 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALISARLQEERRQLEGYELIARGEDPEADREEEEGRRSGDADWIASRGEDGVSTAIEAPSNS 447
+ + + RW+H DPCE DKPL+YE+GWNK+L+YVLA +DG DVT+RYT +W EVLSRR ++ E L+ VLAN+ + + + L E+R + E +L + GRRSGD +W SR EDG + +S
Sbjct: 280 ECFSESLERWMHLDPCEGVYDKPLLYESGWNKKLNYVLAIGKDGVCDVTKRYTRKWHEVLSRRNIIAEPALSSVLANITKECRRGFTSQVRSAL-EDRDEKERQQLERDLHSTDDASTSLPGRRSGDKEWRKSRMEDGSDESFSLTGSS 427
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: A0A4D9DCD8_9STRA (TGc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCD8_9STRA) HSP 1 Score: 111 bits (277), Expect = 9.070e-21 Identity = 73/174 (41.95%), Postives = 103/174 (59.20%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWV-EVLSRRKLVPEKWLTGVLANMGSNRPAARNALIS-ARLQEERRQLEGYELIA------RGEDPEADREEEEGRRSGDADWIASRGEDGVS--TAIEAPSNSPQTTSPLVGAPVGQL 492
++W PA+ R++H D CEN D PLMYE GW K+LSYV+AF R+ VDV+RRYT + E+LSRR+ VPE+ L +A++ N+ RN L + R +ER + E +EL + G E +GR SGDA W +RGEDG +A + S TS + AP+G++
Sbjct: 208 EVWSPAQERFIHLDSCENAADTPLMYEGGWGKKLSYVIAFGRNHCVDVSRRYTRNFENEMLSRRQSVPEQILIQQIASL--NQQLCRNGLSAPVRQSQERMRQEQFELHSLTVLKDAGGGMNIQASERQGRISGDAAWKRARGEDGADLPSAGQQDRRSASVTS-VSQAPIGKV 378
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Match: UPI001BB2B7E6 (peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2B7E6) HSP 1 Score: 108 bits (271), Expect = 1.340e-20 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 1 QIWIPARNRWVHADPCENKLDKPLMYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVLANMGSNRPAARNALISARLQEERRQLE---GYELIARGEDPEADRE-EEEGRRSGDADWIASRGEDGVSTAIEA 435
+++ ++ RW+H DPCEN DKPL+YE GWNK+LSY++AF + VDVT RYT++ EV+ RRK EKWL +A + R A + RR+LE G+EL+ P+ R+ E++GR SG A W +RGE G E+
Sbjct: 296 EVYSNSQKRWLHMDPCENCCDKPLLYEHGWNKKLSYIIAFSFEEVVDVTWRYTAKEQEVIGRRKECREKWLMESIAKLNQRRQANQTGA-------RRRELEERFGHELVE-FLSPKTIRDGEDQGRLSGSAAWRVARGESGAGGLSES 436 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4959.12155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4959.12155.1 >prot_H-elongata_contig4959.12155.1 ID=prot_H-elongata_contig4959.12155.1|Name=mRNA_H-elongata_contig4959.12155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=776bp MYEAGWNKRLSYVLAFDRDGAVDVTRRYTSRWVEVLSRRKLVPEKWLTGVback to top mRNA from alignment at H-elongata_contig4959:116..4955+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4959.12155.1 ID=mRNA_H-elongata_contig4959.12155.1|Name=mRNA_H-elongata_contig4959.12155.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4840bp|location=Sequence derived from alignment at H-elongata_contig4959:116..4955+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4959:116..4955+ >mRNA_H-elongata_contig4959.12155.1 ID=mRNA_H-elongata_contig4959.12155.1|Name=mRNA_H-elongata_contig4959.12155.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4656bp|location=Sequence derived from alignment at H-elongata_contig4959:116..4955+ (Himanthalia elongata Himel1 dioecious)back to top |