mRNA_H-elongata_contig49575.12152.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49575.12152.1
Unique NamemRNA_H-elongata_contig49575.12152.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: D7FIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP6_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 1.870e-169
Identity = 292/476 (61.34%), Postives = 337/476 (70.80%), Query Frame = 1
Query:  187 MRLRSSGIPAHSYGQAYVPWDHLVIDQRWDITIPVVTERDVAVAQ-ASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFS-VSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGCPGPAGQEDGLEDP-----------AADPPGSMEYTTVDGGFIIETPDDECPAGSYLSVDSGHCTACHAGTFGKDPGLVGQGCPGVCPRRYYCPEGTATPILRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVANSNECGAVSYFCPQGSGERKPASVGHYTTPEAPPGSSEMEIAAS--RRTRFTRRIVSGRFQGEPGTYCAAGVRRFCPPGTFGATAGLAAHACSGPCPAGSYCPEGSAEPI 1569
            MRL SSGIP HSYGQ   PW HLV +QRWD+TIP+ ++ D   AQ A  R+VDP EFLT AAREDRP+GMALNGVPFFSPLTA G DTVNPLPG+VA N+TLFD+CAGSLQ  TGAYGYRVMPPCLHG+  + V E GGY  A  L+GF   +     + P ESPLLGFAMDGRRLYGP+D+T SLAWGLDVCNGRWE   +  +  G  +    YTYRATP FPYL+GC GPAG   G                A   G   Y+ ++GGFI+E  +D CPAGS+LS+DSG C AC AGT+GK  GLVG+GCPGVCPR +YCP+GTATP LR  XXXXXXXXXXXXXXXXXXXXXXXXXXX     +SNECG++ Y+CP+GSG+R P + G+YTT    P  S    +A   + T   RR+ SG  Q E GT+C  G RR CP GTFGAT GL +  CS  CP GSYCPEGS EPI
Sbjct:    1 MRLVSSGIPVHSYGQGDEPWAHLVKEQRWDLTIPLTSDEDGIDAQIALSRDVDPTEFLTNAAREDRPIGMALNGVPFFSPLTATGADTVNPLPGKVAENETLFDECAGSLQAKTGAYGYRVMPPCLHGETSAAVLEAGGYKAANVLLGFEDENPEGLPSTPRESPLLGFAMDGRRLYGPYDSTLSLAWGLDVCNGRWEE--QVDDIGGSTAGVYAYTYRATPSFPYLVGCWGPAGVPIGAASAMTTAAGAAAGDVASESGGFVYSKIEGGFIVEAVEDGCPAGSFLSIDSGACEACRAGTYGKSAGLVGKGCPGVCPRGFYCPDGTATPTLRCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSMRYYCPKGSGQRTPVTSGYYTTTAVTPDGSRPGASADAEQETATARRVRSGEAQCEAGTFCVGGRRRPCPSGTFGATKGLTSSNCSDVCPEGSYCPEGSTEPI 474          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: A0A7S2S4K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4K2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.460e-31
Identity = 135/416 (32.45%), Postives = 174/416 (41.83%), Query Frame = 1
Query:  103 GAKPACPTHLFDADLVTAK-DWDRD-GRWFMRLRSSGIPAHSYGQAYVPWDHLVIDQRWDITIPVVTERDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGS-LQT-TTGAYGYRVMPPCLHGDIFSVSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGCPGPAGQEDGLEDPAADPPGSMEYTTVDGGFIIETPDDECPAGSYLSVDSGHCTACHAGTFGKDPGLVGQGCPGVCPRRYYCPEGTATPILRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVANSNECGAVSYFCPQGSGERKPASVGHYTTPE 1338
            GA   CP+  F    V A   +D D G   + + S+G+P H+   + +  + L   Q W  ++ +   R     +A      PR     A  +D P+G+ALNGVPFF+           P P +        D+C G+ L T T+GAY YR  PPCL G          YD    L GF             +  +LG+ +DG  LYGPFDA  +L   LD CNG++  G               Y Y ATP FPY+ GC GP  Q   ++     PP +   +          PD ECPAG   S+  G C  C  G  G         C   C   +YCP GT  P L                     XXXXXXXX  ST A +  CG    FCP+GS    P   G+YT PE
Sbjct:   54 GALDRCPSGDFRGAGVDAHCSFDFDLGDLVLHVTSTGLPDHT---SRLVSEGLAQSQPWSFSLRL--PRGGVPPEA------PRPEGGRALPQDSPVGVALNGVPFFAA----------PAPLDELEAGEALDECLGTTLDTATSGAYVYRAAPPCLDGQ-----TTVAYDLQSMLEGFSRR----------QPKILGYMLDGFPLYGPFDAAGNLHTDLDSCNGKFVDGA--------------YAYYATPNFPYIAGCFGPGVQ---VQQQVELPPLASSSSA---------PDTECPAGMQPSLLGG-CELCPGGRHGPR-------CERECGPGFYCPPGTLAP-LPCPAGRYGASPGLVSADCSGPXXXXXXXXEQSTSATAQPCGGPHVFCPEGSTLPTPVVAGYYTVPE 398          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: F0YLW7_AURAN (MYND-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLW7_AURAN)

HSP 1 Score: 120 bits (302), Expect = 5.830e-25
Identity = 112/378 (29.63%), Postives = 157/378 (41.53%), Query Frame = 1
Query:  112 PAC----PTH-LFDADLVTAK--DWDRDGRWFMRLRSSGIPAHSYGQAYV--PWDHLVIDQRWDITIPVVTERDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGY-DPALAL-IGFGSP------DLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKET-----------TGRVSDNRTYTYRATPEFPYLIGCPGPAGQEDGLEDPAADPPGSMEYTTVDGGFIIETPDDECPAGSYLSVDSGHCTACHAGTFGKDP---------GLVGQGCPGVCPRRYYCPEGTATP 1134
            PAC    P+H L DAD+   +  D+D +  +     ++G+P H Y  ++   P+D +V        +P     D A  +    +    +   A      P+G A++GVP F      G + V P PG    +    D C G    ++GAY YR+ PPCL+GD     +RG Y  PA A  +GFG+         A     P   PL+G  +DG  L+GP D       GLD C G+++   R + +           T +      Y Y AT   PY I C GP         P   PP S     VD G        +CPAG +++   G C AC AG +  +          G   + C G C    YCP GT  P
Sbjct:   12 PACALDFPSHFLRDADVAVEQLVDYDANAEFLEISSATGLPLHRYDASFGAHPYDAVV-------ALP----GDPAAYRQRGFHFGGADLPAAG-----PIGYAVDGVPIFPYYDGDGANAVEPPPGGAPADR---DGCWGFRDPSSGAYVYRIAPPCLYGD-----DRGTYGSPAAAAHLGFGAAVAPGGTAAARARGRPGSVPLVGVMVDGFPLWGPLDKDGKEHGGLDECGGKYQGSTRVRNSQLQRLRSRPFSTRKYDGRGRYAYYATAAPPYTIACFGPGVAAAAGLPPT--PPASPGAGAVDAG-------PDCPAGRHVAA--GACAACPAGRYALEAPAGRAAYAAGSPARHCGGSCGLGAYCPAGTPRP 354          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: A0A2D4CF56_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF56_PYTIN)

HSP 1 Score: 112 bits (279), Expect = 1.200e-22
Identity = 72/195 (36.92%), Postives = 89/195 (45.64%), Query Frame = 1
Query:  985 CPAGSYLSVDSGHCTACHAGTFGKDPGLVGQGCPGVCPRRYYCPEGTATPILRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVANSNECGAVSYFCPQGSGERKPASVGHYTTPEAPPGSSEMEIAASRRTRFTRRIVSGRFQGEPGTYCAAGVRRFCPPGTFGATAGLAAHACSGPCPAGSYCPEGSAEPI 1569
            C  GSY S   G C  C AGTFG  PGL+   C G C   ++CP G                                     ST A    CG+  ++CPQGSG R+    G YT  + P   +  +    +R   +    S + Q EPG +C+ G+RR CPPGT G   GL   ACSGPCPAG YCPE +A PI
Sbjct:   11 CLQGSYQS--GGQCLLCPAGTFGDRPGLLSPACSGPCAPGFFCPAG-------------------------------------STSATLRACGSARFYCPQGSGARRLVDAGFYTM-QLP--FTVDDGGFRQRHEPSSSSASQQRQCEPGFFCSDGIRRPCPPGTVGDRPGLTTAACSGPCPAGFYCPEATAVPI 163          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: A0A024UCP5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCP5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.440e-19
Identity = 67/197 (34.01%), Postives = 87/197 (44.16%), Query Frame = 1
Query:  985 CPAGSYLSVDSGHCTACHAGTFGKDPGLVGQGCPGVCPRRYYCPEGTATPILRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVANSNECGAVSYFCPQGSGERKPASVGHYTTPEAPPGSSEMEIAASRRTRFTRRIVSGRFQGEPGTYCAAGVRRFCPPGTFGATAGLAAHACSGPCPAGSYCPEGSAEPIPC 1575
            CP GSY    +G  T C  G +G   GL    C G CP  +YCP GT TPI                                        C   S +CP  S + +  S+G+Y+ P A P  S +++                   +PG+YCA GV+  CP G+FG T GL + +CSG CPAGSYCP G+ EP+PC
Sbjct:  258 CPPGSYCI--NGLVTPCPLGRYGNATGLTTALCSGPCPEGFYCPVGTETPIA---------------------------------------CLDPSTYCPIESSKPQVVSLGYYSLPTASPTRS-LQLPC-----------------DPGSYCANGVKTKCPAGSFGITLGLTSSSCSGTCPAGSYCPAGTVEPLPC 395          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: A0A067CQQ8_SAPPC (YHYH domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQQ8_SAPPC)

HSP 1 Score: 87.4 bits (215), Expect = 3.570e-14
Identity = 68/232 (29.31%), Postives = 100/232 (43.10%), Query Frame = 1
Query:  184 FMRLRSSGIPAHSYG---QAYVPWDHLVIDQRWDITIPVVTERDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGC 870
            F+ + S+G+P   +G    AY P  H +  + +   +P            +  NV P + L       RP+G+ LNG+PF+S   + G    NP       N  + D C G +  T GAY Y   P CL   +  V+              G+P           SP++G+A+DG  +YG +D+T ++  GLD CNG+W V G             +Y Y  T   PY IGC
Sbjct: 4154 FLYVSSTGLPDGVFGPFPNAYNP--HKIKRRAYTFVLP---------RSPTWSNV-PTQVLPG-----RPIGVMLNGIPFYSYTDSSGNSLRNP----ATANYLILDACNGYVDGT-GAYRYYAAPDCLLDALNDVA--------------GTP-----------SPIVGYALDGYPIYGRYDSTGAMPLGLDACNGKWHVDG-------------SYGYHVTDAPPYTIGC 4325          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: D0N856_PHYIT (YHYH domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N856_PHYIT)

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-13
Identity = 71/231 (30.74%), Postives = 93/231 (40.26%), Query Frame = 1
Query:  193 LRSSGIPAHSYGQAYVPWDHL-VIDQRWDITIPVVTERDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLT----ARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGC 870
            +RSSG+P+ SYG     ++   V  Q +    P    R  A+A A           T +   D P+G+ +NGVPFF+  +        DT NP          L DKC G L  + G Y Y   P CL   +  + ++ G                        SPL+GFA DG  LYGP+         LD CN             GRV D+ TY Y  T   PYL+GC
Sbjct: 4424 VRSSGVPSESYGSFPNAYNRFSVYKQDYVFQFP----RHPAIAGA-----------TTSLPRDTPIGVMVNGVPFFAAYSDVYGGAVVDTSNPAYS-------LLDKCNG-LVDSGGDYRYYASPDCL---LHELGDKAGQP----------------------SPLIGFAFDGFPLYGPYGENGQTPSDLDACN-------------GRVGDDGTYRYHVTLTAPYLLGC 4593          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: T0QSW7_SAPDV (YHYH domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QSW7_SAPDV)

HSP 1 Score: 83.6 bits (205), Expect = 5.810e-13
Identity = 65/232 (28.02%), Postives = 96/232 (41.38%), Query Frame = 1
Query:  184 FMRLRSSGIPAHSYG---QAYVPWDHLVIDQRWDITIPVVTERDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGC 870
            F+ + S+GIP   +G    AY P  H +  + +   +P            +  NV P   L      DRP+G+ LNG+PF+S + + G    NP     + N  + D C G +    GAY Y   P CL                           A+++     SP++G+A+DG  +YG +D+T ++   LD CNG+W   GRY              Y  T   PY I C
Sbjct: 4157 FLYVSSTGIPDGVFGPFPNAYNP--HTIKQKAYTFVLP---------RSPTWSNV-PSPVLP-----DRPIGVMLNGIPFYSYMDSSGNSLRNP----ASANYLILDACNGYVDGA-GAYRYYAAPDCLLD-------------------------ALNDVAGTTSPVIGYALDGYPVYGRYDSTGAVPLDLDACNGKWHADGRYG-------------YHVTDTPPYTINC 4328          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: A0A329T208_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T208_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.450e-12
Identity = 103/257 (40.08%), Postives = 123/257 (47.86%), Query Frame = 1
Query:  991 AGSYLSVDSG-HCT-----ACHAGTFGKDPGLVGQGCPGVCPRRYYCPEGTATPI--------------------------LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVANSNEC---------------------GAVSYFCPQGSGERKPASVGHYTTPEAPPGSS-----------EMEIAASRR--TRFTRRIVSGRFQGEPGTYCAAGVRRFCPPGTFGATAGLAAHACSGPCPAGSYCPEGSAE 1563
            AG  +  + G +C      AC AG FG+   +    C   CP+  YCPE T  P+                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX STV     C                     GAV  FCP+GS     A+ G+YTT +A  GSS           E    A R   TR  + I       + G+YC  GV+R CP GT+GAT GL+  AC+GPCPAG YCP G+A+
Sbjct:  121 AGQQIRCEKGFYCVFGIRRACPAGVFGESTRVTSPECSAPCPKGSYCPEATVVPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVNGVLSCLPSPXXXXXXXXXXXXXXXXXGAVGRFCPKGSSAPTIATAGYYTTWKAYTGSSVTGEQLALQYVEGNSLAIRNQTTRSNQHIC------DKGSYCITGVKRLCPAGTYGATDGLSTAACTGPCPAGFYCPIGTAD 371          
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Match: UPI001455B194 (uncharacterized protein LOC117304015 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455B194)

HSP 1 Score: 75.9 bits (185), Expect = 5.290e-12
Identity = 56/163 (34.36%), Postives = 70/163 (42.94%), Query Frame = 1
Query:  382 PLGMALNGVPFFSPLTARGTDTVNPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGYDPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGLDVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGC 870
            P+G+A+NG+PFFSP T+ G D V            +FD C G   T TGAY Y  MP      +F V E             G P           S ++G A DG  +YGP D            NG     G   +  GR+ D + Y Y AT +FPY IGC
Sbjct:  105 PIGVAINGIPFFSPYTSDGLDAVET---------EVFDDCDGH-PTQTGAYHYHKMPSSC---VFDVIE-------------GQP-----------SSVIGVAFDGFLIYGPNDE-----------NGVTLTSGDLNDCHGRIVDGK-YRYHATSDFPYTIGC 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49575.12152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP6_ECTSI1.870e-16961.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2S4K2_9STRA2.460e-3132.45Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0YLW7_AURAN5.830e-2529.63MYND-type domain-containing protein n=1 Tax=Aureoc... [more]
A0A2D4CF56_PYTIN1.200e-2236.92Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A024UCP5_9STRA2.440e-1934.01Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A067CQQ8_SAPPC3.570e-1429.31YHYH domain-containing protein n=1 Tax=Saprolegnia... [more]
D0N856_PHYIT1.100e-1330.74YHYH domain-containing protein n=2 Tax=Phytophthor... [more]
T0QSW7_SAPDV5.810e-1328.02YHYH domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A329T208_9STRA1.450e-1240.08Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
UPI001455B1945.290e-1234.36uncharacterized protein LOC117304015 n=1 Tax=Aster... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49575contigH-elongata_contig49575:632..4076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.1
Seed ortholog evalue1e-19
Seed eggNOG ortholog164328.Phyra96524
KEGG rclassRC00005
KEGG koko:K00694,ko:K10999,ko:K20924
KEGG TC4.D.3.1.2,4.D.3.1.4,4.D.3.1.5,4.D.3.1.6,4.D.3.1.7,4.D.3.1.9
KEGG ReactionR02889
KEGG Pathwayko00500,ko01100,ko02026,map00500,map01100,map02026
GOsGO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005938,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009653,GO:0009987,GO:0010927,GO:0016020,GO:0016043,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0016759,GO:0016760,GO:0022607,GO:0030154,GO:0030243,GO:0030244,GO:0030435,GO:0030587,GO:0031150,GO:0031154,GO:0032502,GO:0032989,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044448,GO:0044464,GO:0045177,GO:0045179,GO:0045229,GO:0046527,GO:0048646,GO:0048856,GO:0048869,GO:0051273,GO:0051274,GO:0051703,GO:0051704,GO:0070590,GO:0070726,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090702,GO:0099120,GO:0099568,GO:0099738,GO:1901576
EggNOG free text desc.Cellulose synthase
EggNOG OGs2QQSH@2759,3QCHY@4776,COG1215@1
EC2.4.1.12
COG Functional cat.M
CAZyGT2
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko02000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionInsulin-like growth factor binding protein, N-terminal
Ec32 orthologEc-27_000560.1
Exons7
Model size1608
Cds size1608
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930815.8642058-CDS-H-elongata_contig49575:631..7881622930815.8642058-CDS-H-elongata_contig49575:631..788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 632..788 +
1691679582.2918518-CDS-H-elongata_contig49575:631..7881691679582.2918518-CDS-H-elongata_contig49575:631..788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 632..788 +
1622930815.9030564-CDS-H-elongata_contig49575:1036..13151622930815.9030564-CDS-H-elongata_contig49575:1036..1315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 1037..1315 +
1691679582.3024378-CDS-H-elongata_contig49575:1036..13151691679582.3024378-CDS-H-elongata_contig49575:1036..1315Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 1037..1315 +
1622930815.9176738-CDS-H-elongata_contig49575:1812..19641622930815.9176738-CDS-H-elongata_contig49575:1812..1964Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 1813..1964 +
1691679582.3112576-CDS-H-elongata_contig49575:1812..19641691679582.3112576-CDS-H-elongata_contig49575:1812..1964Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 1813..1964 +
1622930815.9345613-CDS-H-elongata_contig49575:2182..26831622930815.9345613-CDS-H-elongata_contig49575:2182..2683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 2183..2683 +
1691679582.3205068-CDS-H-elongata_contig49575:2182..26831691679582.3205068-CDS-H-elongata_contig49575:2182..2683Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 2183..2683 +
1622930815.949218-CDS-H-elongata_contig49575:2873..30161622930815.949218-CDS-H-elongata_contig49575:2873..3016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 2874..3016 +
1691679582.3294058-CDS-H-elongata_contig49575:2873..30161691679582.3294058-CDS-H-elongata_contig49575:2873..3016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 2874..3016 +
1622930815.9641078-CDS-H-elongata_contig49575:3372..35461622930815.9641078-CDS-H-elongata_contig49575:3372..3546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 3373..3546 +
1691679582.34038-CDS-H-elongata_contig49575:3372..35461691679582.34038-CDS-H-elongata_contig49575:3372..3546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 3373..3546 +
1622930815.9786143-CDS-H-elongata_contig49575:3874..40761622930815.9786143-CDS-H-elongata_contig49575:3874..4076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 3875..4076 +
1691679582.3552256-CDS-H-elongata_contig49575:3874..40761691679582.3552256-CDS-H-elongata_contig49575:3874..4076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49575 3875..4076 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49575.12152.1prot_H-elongata_contig49575.12152.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49575 632..4076 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49575.12152.1

>prot_H-elongata_contig49575.12152.1 ID=prot_H-elongata_contig49575.12152.1|Name=mRNA_H-elongata_contig49575.12152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=536bp
MDLLMAVILSAVSPSGATWTTSSSDYNDAPFIKDGAKPACPTHLFDADLV
TAKDWDRDGRWFMRLRSSGIPAHSYGQAYVPWDHLVIDQRWDITIPVVTE
RDVAVAQASRRNVDPREFLTAAAREDRPLGMALNGVPFFSPLTARGTDTV
NPLPGEVATNDTLFDKCAGSLQTTTGAYGYRVMPPCLHGDIFSVSERGGY
DPALALIGFGSPDLAIDETLPPESPLLGFAMDGRRLYGPFDATRSLAWGL
DVCNGRWEVGGRYKETTGRVSDNRTYTYRATPEFPYLIGCPGPAGQEDGL
EDPAADPPGSMEYTTVDGGFIIETPDDECPAGSYLSVDSGHCTACHAGTF
GKDPGLVGQGCPGVCPRRYYCPEGTATPILRCPVGTFGAAPGMGHASCSG
ECQAGYFCLSGSTVANSNECGAVSYFCPQGSGERKPASVGHYTTPEAPPG
SSEMEIAASRRTRFTRRIVSGRFQGEPGTYCAAGVRRFCPPGTFGATAGL
AAHACSGPCPAGSYCPEGSAEPIPCPPGRYGGDLP*
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mRNA from alignment at H-elongata_contig49575:632..4076+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49575.12152.1 ID=mRNA_H-elongata_contig49575.12152.1|Name=mRNA_H-elongata_contig49575.12152.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3445bp|location=Sequence derived from alignment at H-elongata_contig49575:632..4076+ (Himanthalia elongata Himel1 dioecious)
ATGGACCTTCTGATGGCGGTGATACTGTCAGCAGTATCACCGTCGGGCGC TACGTGGACAACCTCGTCGTCTGACTACAACGATGCCCCTTTCATTAAGG ACGGCGCTAAGCCTGCATGCCCTACACATCTCTTTGACGCGGATCTTGTG ACAGCCAGTTGCCATCAAGGCGAGCAAGTAGGCTAAAAAATACATCATCG ACCTTTGTGTTGCGGAAGGAAATACCGGCACGGTGTGCGGTGACACAATT TCAGTCGGCTTATCTGGTAGCTTTGAGTTTATTTTTTTTGCGGCATCCAC AGATCTCCATTCGCACTTTGAAATCCCCGTGTCTATGATGCTGAGCCAGC CGTATTTTTATCTGATAAGTGCAAAACTGGTGCATGATCTATTGATTCTA ATCAGAAGATTGGGACCGTGACGGGCGGTGGTTTATGCGTCTCCGTTCCT CTGGGATACCCGCGCACTCCTACGGTCAAGCTTACGTACCGTGGGACCAC CTCGTCATTGATCAACGGTGGGATATAACAATACCTGTCGTGACCGAGAG AGACGTGGCCGTCGCTCAAGCTTCTCGCCGAAACGTAGACCCTAGGGAGT TCCTGACCGCTGCCGCACGAGAGGATAGACCCCTCGGCATGGCACTCAAC GGCGTACCCTTCTTTTCTCCACTTACCGCGCGAGGTGTACAAGGTTCAGC GCACACCACTATTACGTACCACAAGCTTTACTTTTTTGACGCGGTCGTAC AAATCATCCCTTGTTGCCAGCACCGACTGGTGGAAGTGGCTACAGGCTAC ATCTTACGTATATAGAAAAGCTAAATCGGATAACAAATGCTAAATGTGGC ATCCAAACAAAACCCCGATATCATCCTAAGCTCGCCATCCCTGCGATCAG CGCTGTCATACGTGTTCCTTTCTCTGCGTGGATAATGCGGCATGTCTTCC CGTCATTGTGGTCACAAGGAATTAAGCCTCCAATCTAGCCTTTGTTTGGC GCATCATGAAATTATCCACGCTACGTAGTCGGCGGAAGCGATTGCATACT ACAAGTGACACTACACTGTACAGTTTTAGAACCTTTGTGGAATGTACGCT ATGAGTATCTAGGTAATGTAGGTCGACTCAGCATTTGATTTTGCCCCCAT ACACCAAAATATTTTTATCAACGGGGGGTAGGCACTGACACGGTAAACCC ACTGCCTGGTGAAGTGGCGACGAACGACACGTTGTTCGACAAGTGCGCTG GGTCCTTGCAGACAACAACGGGAGCATACGGGTATCGCGTCATGCCTCCC TGCCTACACGGGGATATTTTTTCGGTCTCCGAGGTGAAGTGGGAGTATGG CCTACTCTTAAGGCTCTCAGAGGGTTTTGTAGTGTTTTGCGCGAGGAGTT CAAACACTTTCTCCCTCTTACTTGATTTATCTCTATCTTTCTCTCTCACC CTCTCGCATCATCCGAACCCTCTCGGGCGGAATTCACAAGGTGTACTCGA GCCCAACCGCCCAAGCCTTGCCATGCTCACCCAAATATCGTGCGTTTGCA GAGGGGTGGTTACGATCCCGCTCTTGCCTTGATTGGGTTCGGATCGCCTG ACCTTGCGATCGACGAGACCTTGCCACCAGAGTCCCCCCTTCTCGGCTTC GCCATGGATGGACGGAGACTCTACGGACCGTTTGACGCAACTCGATCGCT GGCGTGGGGCCTCGACGTATGCAACGGTCGGTGGGAGGTCGGAGGCCGCT ACAAAGAGACCACCGGCCGCGTCAGTGACAACCGAACTTACACGTACCGG GCGACGCCGGAGTTTCCTTACCTCATCGGCTGCCCAGGCCCCGCGGGACA GGAAGATGGTCTAGAGGATCCAGCGGCCGATCCCCCTGGTAGCATGGAAT ACACAACCGTCGACGGTGGGTTTATCATAGAAACGCCAGACGACGAGTGT CCTGCAGGGAGCTATCTGAGCGTAGATTCGGGGCACTGCACGGCGTGTCA CGCCGGGACGTTCGGAAAGGATCCAGGTCTGGTGGGGCAAGGATGCCCGG GGGTAAGTTATTCACGCACGATATCCGCTTGGCGAGCGTCGATTATCGGG GGGGGGGGGGTAGGGGGAGACTTCCGGTTCCAATAACAAAACGACACGAC TTTGATTAACTTTACCGCGCTCGCTAATCATTTGATTGTGTTACTATCTA CGTGCATCGACCGTTTATGCTTCAACAACGTTTTTGCGACAGGTGTGTCC ACGCCGGTATTACTGCCCAGAGGGTACCGCGACACCCATCCTGAGATGCC CTGTGGGTACGTTCGGCGCGGCTCCAGGAATGGGACACGCTTCTTGCAGT GGTGAATGTCAAGCGGGGTATTTCTGTCTATCTGGGTGAGGTGCTTCCGA CAAAGACAAGACTACGCCAGGCCTCCATGGGGCCGTGACTTTTCCAATAG TAGTTTCGATTGGGTTGTCACAGCATCAGTGATAAATCAAGCGCTCAATG TTCATGGCATCGCTACGGCTATTCCACAGCATTCTCTGAAGACATTTTGA GTGCAACCCTGACCAAACCGTTCCTACAAGACATCAGTTGCCTTGATTCT GCGATGTTACTGTGGTGCTAGAATCACGAAAATCATCCCCGTTTGGAGGC TGCTTTCGCTTGCCTCGATGCCCTCGTCGCCATGTCTTGGGTGTTAACCT TGTTTTCTACGTCGTATGCCTCGTGACCTGTCGATCGGCAGCTCGACTGT TGCGAACAGCAACGAGTGTGGAGCCGTTTCATATTTTTGTCCACAGGGAA GCGGCGAACGGAAGCCGGCGAGCGTCGGGCACTACACTACGCCCGAAGCA CCGCCGGGTTCATCCGAGATGGAAATCGCCGCATCGCGCCGAACAAGGTT CACCCGCCGTATTGTGTACTCGTCCGCGCATCCAAGTGATATTTTCTTGC AAAAAAGACAACATGAGCAAGGTAGCGTACACCAGCGTCTGCCGGTCGAT ATTCTTACGCCTCCAAATGTAATTGGCATCGAGTGAGGGGTCACATCCTC GTGTGTGATGGGTCTCTTTTCGGCAGCAACCAAATGGGGCGGGCTGCTAG TGGTCGGGCTCAGTCCTTCCATGGGCGAGGGAAACATAATCCTCGTATTT TCAAGTCAAACCTGTACTTTTTATGTACGGGGGGGGGGGGGTAAAGGTCC GCTCTTACCAACGATAACTTGTTTTACCCCCCCCCCGTAAAAGGTCCGGG CGGTTTCAAGGGGAGCCGGGAACGTACTGTGCGGCTGGGGTTAGAAGATT TTGCCCCCCCGGTACTTTTGGCGCGACCGCGGGGCTTGCGGCGCACGCAT GCAGCGGCCCGTGTCCGGCGGGGAGCTACTGCCCCGAGGGGAGCGCAGAA CCTATCCCATGCCCACCCGGAAGATACGGAGGTGATTTGCCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig49575:632..4076+

>mRNA_H-elongata_contig49575.12152.1 ID=mRNA_H-elongata_contig49575.12152.1|Name=mRNA_H-elongata_contig49575.12152.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3216bp|location=Sequence derived from alignment at H-elongata_contig49575:632..4076+ (Himanthalia elongata Himel1 dioecious)
ATGGACCTTCTGATGGCGGTGATACTGTCAGCAGTATCACCGTCGGGCGC
TACGTGGACAACCTCGTCGTCTGACTACAACGATGCCCCTTTCATTAAGG
ACGGCGCTAAGCCTGCATGCCCTACACATCTCTTTGACGCGGATCTTGTG
ACAGCCAATGGACCTTCTGATGGCGGTGATACTGTCAGCAGTATCACCGT
CGGGCGCTACGTGGACAACCTCGTCGTCTGACTACAACGATGCCCCTTTC
ATTAAGGACGGCGCTAAGCCTGCATGCCCTACACATCTCTTTGACGCGGA
TCTTGTGACAGCCAAAGATTGGGACCGTGACGGGCGGTGGTTTATGCGTC
TCCGTTCCTCTGGGATACCCGCGCACTCCTACGGTCAAGCTTACGTACCG
TGGGACCACCTCGTCATTGATCAACGGTGGGATATAACAATACCTGTCGT
GACCGAGAGAGACGTGGCCGTCGCTCAAGCTTCTCGCCGAAACGTAGACC
CTAGGGAGTTCCTGACCGCTGCCGCACGAGAGGATAGACCCCTCGGCATG
GCACTCAACGGCGTACCCTTCTTTTCTCCACTTACCGCGCGAGAAGATTG
GGACCGTGACGGGCGGTGGTTTATGCGTCTCCGTTCCTCTGGGATACCCG
CGCACTCCTACGGTCAAGCTTACGTACCGTGGGACCACCTCGTCATTGAT
CAACGGTGGGATATAACAATACCTGTCGTGACCGAGAGAGACGTGGCCGT
CGCTCAAGCTTCTCGCCGAAACGTAGACCCTAGGGAGTTCCTGACCGCTG
CCGCACGAGAGGATAGACCCCTCGGCATGGCACTCAACGGCGTACCCTTC
TTTTCTCCACTTACCGCGCGAGGCACTGACACGGTAAACCCACTGCCTGG
TGAAGTGGCGACGAACGACACGTTGTTCGACAAGTGCGCTGGGTCCTTGC
AGACAACAACGGGAGCATACGGGTATCGCGTCATGCCTCCCTGCCTACAC
GGGGATATTTTTTCGGTCTCCGAGGCACTGACACGGTAAACCCACTGCCT
GGTGAAGTGGCGACGAACGACACGTTGTTCGACAAGTGCGCTGGGTCCTT
GCAGACAACAACGGGAGCATACGGGTATCGCGTCATGCCTCCCTGCCTAC
ACGGGGATATTTTTTCGGTCTCCGAGAGGGGTGGTTACGATCCCGCTCTT
GCCTTGATTGGGTTCGGATCGCCTGACCTTGCGATCGACGAGACCTTGCC
ACCAGAGTCCCCCCTTCTCGGCTTCGCCATGGATGGACGGAGACTCTACG
GACCGTTTGACGCAACTCGATCGCTGGCGTGGGGCCTCGACGTATGCAAC
GGTCGGTGGGAGGTCGGAGGCCGCTACAAAGAGACCACCGGCCGCGTCAG
TGACAACCGAACTTACACGTACCGGGCGACGCCGGAGTTTCCTTACCTCA
TCGGCTGCCCAGGCCCCGCGGGACAGGAAGATGGTCTAGAGGATCCAGCG
GCCGATCCCCCTGGTAGCATGGAATACACAACCGTCGACGGTGGGTTTAT
CATAGAAACGCCAGACGACGAGTGTCCTGCAGGGAGCTATCTGAGCGTAG
ATTCGGGGCACTGCACGGCGTGTCACGCCGGGACGTTCGGAAAGGATCCA
GGTCTGGTGGGGCAAGGATGCCCGGGGAGGGGTGGTTACGATCCCGCTCT
TGCCTTGATTGGGTTCGGATCGCCTGACCTTGCGATCGACGAGACCTTGC
CACCAGAGTCCCCCCTTCTCGGCTTCGCCATGGATGGACGGAGACTCTAC
GGACCGTTTGACGCAACTCGATCGCTGGCGTGGGGCCTCGACGTATGCAA
CGGTCGGTGGGAGGTCGGAGGCCGCTACAAAGAGACCACCGGCCGCGTCA
GTGACAACCGAACTTACACGTACCGGGCGACGCCGGAGTTTCCTTACCTC
ATCGGCTGCCCAGGCCCCGCGGGACAGGAAGATGGTCTAGAGGATCCAGC
GGCCGATCCCCCTGGTAGCATGGAATACACAACCGTCGACGGTGGGTTTA
TCATAGAAACGCCAGACGACGAGTGTCCTGCAGGGAGCTATCTGAGCGTA
GATTCGGGGCACTGCACGGCGTGTCACGCCGGGACGTTCGGAAAGGATCC
AGGTCTGGTGGGGCAAGGATGCCCGGGGGTGTGTCCACGCCGGTATTACT
GCCCAGAGGGTACCGCGACACCCATCCTGAGATGCCCTGTGGGTACGTTC
GGCGCGGCTCCAGGAATGGGACACGCTTCTTGCAGTGGTGAATGTCAAGC
GGGGTATTTCTGTCTATCTGGGTGTGTCCACGCCGGTATTACTGCCCAGA
GGGTACCGCGACACCCATCCTGAGATGCCCTGTGGGTACGTTCGGCGCGG
CTCCAGGAATGGGACACGCTTCTTGCAGTGGTGAATGTCAAGCGGGGTAT
TTCTGTCTATCTGGCTCGACTGTTGCGAACAGCAACGAGTGTGGAGCCGT
TTCATATTTTTGTCCACAGGGAAGCGGCGAACGGAAGCCGGCGAGCGTCG
GGCACTACACTACGCCCGAAGCACCGCCGGGTTCATCCGAGATGGAAATC
GCCGCATCGCGCCGAACAAGGTTCACCCGCCGTATTGTCTCGACTGTTGC
GAACAGCAACGAGTGTGGAGCCGTTTCATATTTTTGTCCACAGGGAAGCG
GCGAACGGAAGCCGGCGAGCGTCGGGCACTACACTACGCCCGAAGCACCG
CCGGGTTCATCCGAGATGGAAATCGCCGCATCGCGCCGAACAAGGTTCAC
CCGCCGTATTGTGTCCGGGCGGTTTCAAGGGGAGCCGGGAACGTACTGTG
CGGCTGGGGTTAGAAGATTTTGCCCCCCCGGTACTTTTGGCGCGACCGCG
GGGCTTGCGGCGCACGCATGCAGCGGCCCGTGTCCGGCGGGGAGCTACTG
CCCCGAGGGGAGCGCAGAACCTATCCCATGCCCACCCGGAAGATACGGAG
GTGATTTGCCTTGAGTCCGGGCGGTTTCAAGGGGAGCCGGGAACGTACTG
TGCGGCTGGGGTTAGAAGATTTTGCCCCCCCGGTACTTTTGGCGCGACCG
CGGGGCTTGCGGCGCACGCATGCAGCGGCCCGTGTCCGGCGGGGAGCTAC
TGCCCCGAGGGGAGCGCAGAACCTATCCCATGCCCACCCGGAAGATACGG
AGGTGATTTGCCTTGA
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