mRNA_H-elongata_contig49483.12136.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49483.12136.1
Unique NamemRNA_H-elongata_contig49483.12136.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A6H5KF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF67_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.470e-103
Identity = 169/275 (61.45%), Postives = 198/275 (72.00%), Query Frame = 1
Query:   25 ENTSLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGA----------ERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            E  SLNV+K+LLQMCLTT+NVVCWLVPMKIRSFVESKRAISMANAFSGG+FLSLAFGH++P + HGFE +GLP N+PYFLTLSGYMLIFFVEK+AFDAH IM++G            A  + + V A                       L+ALGVHALMETMALGLSS+                      LVSFLKSGL ERQ+I  LS+FSC+GP G+G+GIA+SEF G+LADA+M+A+AAGTFIYVGATEVIAEEFE+P +KWKKF AL+ 
Sbjct:   87 EKMSLNVMKILLQMCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHLMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHSIMHEGDGHGQQQHGGGKAMADGSSVTAVXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFTGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFFALTA 361          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: D7G198_ECTSI (ZIP divalent metal transporters n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G198_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 8.170e-89
Identity = 157/272 (57.72%), Postives = 182/272 (66.91%), Query Frame = 1
Query:   34 SLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAERVTSSG----------RSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            SLNV+K+LLQ                IRSFVESKRAISMANAFSGG+FLSLAFGHM+P +  GFE SGLP N+PYFLTLSGYMLIFFVEK+AFDAH+IM++G        X                              RSA ILL+ALGVHALMETMALGLSS+                      LVSFLKSGL ERQ+I  LS+FSC+GP G+G+GIA+SEF G+LADA+M+A+AAGTFIYVGATEVIAEEFE+P +KWKKF AL+ 
Sbjct:    2 SLNVMKILLQ----------------IRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATLGFEESGLPANVPYFLTLSGYMLIFFVEKVAFDAHNIMHEGDGHGQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAIILLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGLGLGIAISEFAGKLADAVMVAMAAGTFIYVGATEVIAEEFESPHDKWKKFSALTA 257          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A836CLP2_9STRA (ZIP divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP2_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.090e-83
Identity = 130/235 (55.32%), Postives = 170/235 (72.34%), Query Frame = 1
Query:  115 RSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            R F ESK  ISMANAFSGG+FLSLAFGHMLP + HGFE SGLPE+ P++LTL+GY+LIFFVEKIAFD H +++D          ++   D      + +V +SGRSAT+LL+AL VH+L ETMALGLS+S                      LVSFLK+GL + +I+ ML++FSC+GP+GVG+G+A +++ G L DA++++LAAGTF+YVGATEV+A+EFETP +KWKKF AL G
Sbjct:    2 RRFTESKVGISMANAFSGGVFLSLAFGHMLPHAAHGFENSGLPESTPFYLTLTGYLLIFFVEKIAFDTHEMLHDAHDNGPQSPSTIKPIDSS---NSAQVAASGRSATVLLLALSVHSLFETMALGLSTSRLNALLLAMSIGLHQPAESLALLVSFLKTGLPQGKIVKMLALFSCVGPLGVGLGVAAAQYAGDLVDAVLVSLAAGTFVYVGATEVVADEFETPHHKWKKFAALLG 233          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A448Z4G5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4G5_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.300e-78
Identity = 141/262 (53.82%), Postives = 180/262 (68.70%), Query Frame = 1
Query:   49 KVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLP---ENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAERVTS--SGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            K+L Q  LTTINVVCWLVP++ +SF E+K A+S+ANAFSGGIFLSLAFGHM+P+ VH +  S +    E  PY L LSGY+LIFFVEK+AFDAH IM++          +  +K      G++  T+  +GRSA ILL ALGVH+++E MALGLS S        X             LV+FLKSG+ ++ IIT LSVFS +GP+GV +G+AV+EF   + DAIM+A+ AGTF+YVGATEVI EE+E  E+KWKKF AL G
Sbjct:  165 KILFQAFLTTINVVCWLVPLRSKSFGENKLALSLANAFSGGIFLSLAFGHMIPECVHEYAASAVGDYNEATPYMLVLSGYLLIFFVEKVAFDAHEIMHEMEQGGQSDDGNAVSKSS----GSDATTTKNTGRSAMILLAALGVHSILEMMALGLSDSFSDSAILTXSIALHQPAESIALLVAFLKSGMPKKDIITFLSVFSAMGPIGVXLGMAVNEFAAPIVDAIMLAVVAGTFVYVGATEVIPEEWEDSEHKWKKFFALMG 422          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: B5Y3R5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3R5_PHATC)

HSP 1 Score: 243 bits (621), Expect = 8.430e-75
Identity = 137/264 (51.89%), Postives = 177/264 (67.05%), Query Frame = 1
Query:   37 LNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMN-----DGXXXXXXXXXSVSAKDEMAVVGAERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLAL 813
            LN  KV+ Q  LT INV+CWLVP++ +   E+K A+S+ANAFSGG+FLSLAFGH++P+ +HGFE S   E  P+ L L+GY+LIFFVEK+AFDAH I++     D  XXXX  XX    K       A    SSGRSA ILL AL VH+++E MALGL+ +                      LV+FLKSG+ E QII  LS+FSC+GP+GV +G+AV+EF   + D++M+A+ AGTF+YVGATEVI EE+E   +KWKKF AL
Sbjct:  151 LNAWKVIFQAILTAINVICWLVPLRSKKMSENKLALSLANAFSGGVFLSLAFGHLIPECIHGFEASTYAETTPFMLVLAGYLLIFFVEKVAFDAHDILHEMQGDDHHXXXXPDXXXXXXKKSSGGTEAASSLSSGRSAVILLGALAVHSILEMMALGLADTFGDCALLTMSISLHQPAESIALLVAFLKSGVPEAQIIQYLSIFSCMGPIGVALGMAVNEFAAPIVDSMMLAVVAGTFVYVGATEVIPEEWEDSTHKWKKFAAL 414          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A1E7FJQ0_9STRA (Zinc/iron permease n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJQ0_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.820e-74
Identity = 135/274 (49.27%), Postives = 173/274 (63.14%), Query Frame = 1
Query:   28 NTSLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGS------GLPEN--LPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAE----RVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLAL 813
            N  LN  K++ Q  LT +NVVCWLVP+K +SF E+K A+S+ANAFSGG+FLSLAFGH++P+ VHGF  +      GL  N   PY L LSGYMLIFFVEK+AFDAH  +++                +  V        +  +SGRSA ILL AL VH+++E  ALGLS +                      LV+FLKSG+ + QII  LS+FS +GP+G G+GI V+EF   + D+IM+A+ AGTF+YVGATEVI EEFE  +NKWKKF AL
Sbjct:    4 NIPLNGWKIIFQTFLTILNVVCWLVPLKSKSFGENKLALSLANAFSGGVFLSLAFGHLIPECVHGFSSNTGGLVGGLMSNEATPYMLVLSGYMLIFFVEKVAFDAHGALHEMEHAQDNTNKVKGNNKKNGVAHTHSKDAQQQNSGRSAVILLAALAVHSILEMAALGLSDTFSDSALLTVSIALHQPAESIALLVAFLKSGMPKNQIIVFLSIFSLMGPIGCGLGIVVNEFADPIVDSIMLAVVAGTFVYVGATEVIPEEFEDSDNKWKKFTAL 277          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A1Z5JFF0_FISSO (Solute carrier family 39 (Zinc transporter), member 1/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFF0_FISSO)

HSP 1 Score: 240 bits (612), Expect = 1.090e-73
Identity = 134/263 (50.95%), Postives = 179/263 (68.06%), Query Frame = 1
Query:   37 LNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAERVT--SSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            LN  KV+ Q  LTT+NV+CWL+P+K +   ++K A+SMANAFSGG+FLSLAFGH++P+ VHGF  + LPE  PY L L+GY+LIFFVEK+AFDAH I+++     XXXXX    +        + VT   SGR A ILL AL VH+++E MALGL+++                      LV+FLKSG+ E Q++  LS+FSC+GP+GV +G+AVSE+   + D+IM+A+ AGTF+YVGATEVI EE+E   +KW KF AL G
Sbjct:  136 LNSWKVIFQALLTTMNVLCWLIPLKSKKISQNKFALSMANAFSGGVFLSLAFGHLIPECVHGF--ANLPEETPYLLVLAGYLLIFFVEKVAFDAHEILHEMQGEGXXXXXXXXXQVVNTKESKQEVTPAGSGRGAVILLGALAVHSVLEMMALGLANNFGDCALLTLSISLHQPAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVSEYAAPIVDSIMLAVVAGTFVYVGATEVIPEEWEDGHHKWAKFAALMG 396          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A7S0UKI6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKI6_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.870e-73
Identity = 134/267 (50.19%), Postives = 173/267 (64.79%), Query Frame = 1
Query:   28 NTSLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLP---ENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEMAVVGAERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLALSG 819
            N  LN  K++ Q+ LTTINVVCWLVP++ +SF E+K A+S+ANAFSGG+FLSLAFGH++P+ V GF  S +    E  PY L LSGY+LIFFVEK+AFDA  I  +          ++S K E          ++ RSA ILL AL VH+++E MALGLS S                      LV+FLKSG+ + +II  LSVFS +GP+GV +G+AV+EF   + DA+ +A+ AGTF+YVGATEVI EEFE  E+KW KF AL G
Sbjct:   74 NIPLNGWKIIFQVILTTINVVCWLVPLQSKSFGENKLALSLANAFSGGVFLSLAFGHLIPECVEGFASSLVGHYNEATPYMLVLSGYLLIFFVEKVAFDADAIKEELEHAQEDSNGAISKKSEDG-------KNTSRSAVILLAALAVHSILEMMALGLSDSFSDSAILTVSIALHQPAESIALLVAFLKSGMPKGEIIKFLSVFSMMGPIGVALGMAVNEFAAPIVDAVTLAIVAGTFVYVGATEVIPEEFEDSEHKWMKFAALMG 333          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A7S1YY76_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY76_TRICV)

HSP 1 Score: 238 bits (607), Expect = 4.780e-73
Identity = 133/269 (49.44%), Postives = 175/269 (65.06%), Query Frame = 1
Query:   37 LNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMNDGXXXXXXXXXSVSAKDEM----------AVVGAERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLAL 813
            LN+ KV+ Q  LTT+NV+CWL+P++      +K A+S+ANAFSGG+FLSLAFGH++P+ VHGF G    E LPY L L GY+LIFFVEK+AFDAH +M+ G             K++           A  G E +  SGRSA ILL AL VH+++E  ALGL+++                      LV+FLKSG+ + QI+  LS+FS +GPVGV IG+AV+EF   + DAIM+A+ AGTF+YVGATEVI EE+E P++KWKKF AL
Sbjct:  119 LNLWKVIFQAMLTTMNVLCWLIPLRSEKISSNKLALSLANAFSGGVFLSLAFGHLIPECVHGF-GPEYNEALPYMLVLGGYLLIFFVEKVAFDAHGLMHAGEEGHDERGHHTHGKEKAVSNGTSNKDDAAEGGEGL-GSGRSAVILLGALAVHSVLEMTALGLANTFGESALLSLSIALHQPAESIALLVAFLKSGMPKPQIVQYLSIFSAMGPVGVAIGMAVNEFAAPIVDAIMLAIVAGTFVYVGATEVIPEEWEEPDHKWKKFAAL 385          
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Match: A0A6S8XAZ7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XAZ7_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.090e-71
Identity = 131/275 (47.64%), Postives = 172/275 (62.55%), Query Frame = 1
Query:   28 NTSLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISMANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVEKIAFDAHHIMND---GXXXXXXXXXSVSAKDEMA----------VVGAERVTSSGRSATILLVALGVHALMETMALGLSSSXXXXXXXXXXXXXXXXXXXXXXLVSFLKSGLKERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGATEVIAEEFETPENKWKKFLAL 813
            N  LN+ KV+ Q+ LT +NV CWL+P++ +   E+K A+ +ANAFSGG+FLSLAFGH++P+ +HGFEG+GL E LPY + L GY+LIFFVEK+AFDAH +M+    G          V  K +               A    ++GRSA ILL AL VH+++E  ALGL+ +                      LV+FLKSG+ +  II  LSVFS +GPVGV IG+AV+ F   + D+IM+A  AGTFIYVGATEVI EE+E  E+KW KF AL
Sbjct:  219 NIPLNMWKVIFQIFLTAMNVACWLIPLRAKKITENKYALGIANAFSGGVFLSLAFGHLIPECIHGFEGTGLNEALPYMIVLGGYLLIFFVEKVAFDAHGLMHGCGPGDGSGDEHGKEVVVKKDXXXXXXXXXXGDTATATATANNGRSAVILLGALAVHSILEMTALGLARTFGDSALLSLSIALHQPAESIALLVAFLKSGMPKSDIIKYLSVFSAMGPVGVAIGMAVTSFAAPIVDSIMLATVAGTFIYVGATEVIPEEWEDQEHKWPKFFAL 493          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49483.12136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF67_9PHAE1.470e-10361.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G198_ECTSI8.170e-8957.72ZIP divalent metal transporters n=1 Tax=Ectocarpus... [more]
A0A836CLP2_9STRA1.090e-8355.32ZIP divalent metal transporter n=1 Tax=Tribonema m... [more]
A0A448Z4G5_9STRA2.300e-7853.82Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B5Y3R5_PHATC8.430e-7551.89Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1E7FJQ0_9STRA1.820e-7449.27Zinc/iron permease n=1 Tax=Fragilariopsis cylindru... [more]
A0A1Z5JFF0_FISSO1.090e-7350.95Solute carrier family 39 (Zinc transporter), membe... [more]
A0A7S0UKI6_9STRA1.870e-7350.19Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S1YY76_TRICV4.780e-7349.44Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6S8XAZ7_9STRA2.090e-7147.64Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49483contigH-elongata_contig49483:1886..3794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.6
Seed ortholog evalue5.4e-62
Seed eggNOG ortholog2850.Phatr46780
KEGG koko:K14709
KEGG TC2.A.5.1,2.A.5.3,2.A.5.6
EggNOG free text desc.ZIP Zinc transporter
EggNOG OGs2XF5Z@2836,KOG1558@1,KOG1558@2759
COG Functional cat.P
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZIP divalent metal transporters
Ec32 orthologEc-12_005290.1
Exons4
Model size820
Cds size819
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49483.12136.1prot_H-elongata_contig49483.12136.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49483 1886..3794 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930813.8417532-CDS-H-elongata_contig49483:1885..20521622930813.8417532-CDS-H-elongata_contig49483:1885..2052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 1886..2052 -
1691679581.3761494-CDS-H-elongata_contig49483:1885..20521691679581.3761494-CDS-H-elongata_contig49483:1885..2052Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 1886..2052 -
1622930813.8677783-CDS-H-elongata_contig49483:2335..24381622930813.8677783-CDS-H-elongata_contig49483:2335..2438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 2336..2438 -
1691679581.3902123-CDS-H-elongata_contig49483:2335..24381691679581.3902123-CDS-H-elongata_contig49483:2335..2438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 2336..2438 -
1622930813.8807125-CDS-H-elongata_contig49483:2732..30881622930813.8807125-CDS-H-elongata_contig49483:2732..3088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 2733..3088 -
1691679581.3985527-CDS-H-elongata_contig49483:2732..30881691679581.3985527-CDS-H-elongata_contig49483:2732..3088Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 2733..3088 -
1622930813.8961437-CDS-H-elongata_contig49483:3601..37941622930813.8961437-CDS-H-elongata_contig49483:3601..3794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 3602..3794 -
1691679581.4105375-CDS-H-elongata_contig49483:3601..37941691679581.4105375-CDS-H-elongata_contig49483:3601..3794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49483 3602..3794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49483.12136.1

>prot_H-elongata_contig49483.12136.1 ID=prot_H-elongata_contig49483.12136.1|Name=mRNA_H-elongata_contig49483.12136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp
ASAIAGAVENTSLNVIKVLLQMCLTTINVVCWLVPMKIRSFVESKRAISM
ANAFSGGIFLSLAFGHMLPQSVHGFEGSGLPENLPYFLTLSGYMLIFFVE
KIAFDAHHIMNDGGGSHHHHGGSVSAKDEMAVVGAERVTSSGRSATILLV
ALGVHALMETMALGLSSSKLSAGLLAMSIGLHQPAESLALLVSFLKSGLK
ERQIITMLSVFSCIGPVGVGIGIAVSEFFGQLADAIMIALAAGTFIYVGA
TEVIAEEFETPENKWKKFLALSG
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mRNA from alignment at H-elongata_contig49483:1886..3794-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49483.12136.1 ID=mRNA_H-elongata_contig49483.12136.1|Name=mRNA_H-elongata_contig49483.12136.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1909bp|location=Sequence derived from alignment at H-elongata_contig49483:1886..3794- (Himanthalia elongata Himel1 dioecious)
GCTTCGGCAATAGCGGGGGCGGTCGAGAACACGAGCCTCAACGTGATCAA GGTCCTTCTGCAGATGTGCCTCACCACCATCAACGTGGTCTGCTGGCTGG TGCCAATGAAGATTCGCAGCTTCGTGGAGTCGAAAAGGGCCATCAGCATG GCAAATGCCTTCAGCGGTGGTATATTTCTCTCGCTAGCCTTCGGTGAGCG TGGATCAGACGAAGTCTATCCGAGACAGAAATACCGGTAGATTGCCGCAG TTGCCCAACAGAGACATGAGACTGTGTTCCCTTAAATGCCACACATCACG TTAGCTCCGCACGCCACCTCGAACAAGAGATCGAGCAACGGTTGAGCTTC GAAGCGCAAACGCAAACAGCGGGCGGCTCATGAATACAAAATAAGGGTTT GATTGCGTTCATGTTGTTGTTGTTGGTCACACATTTGGCAGAAGATCAAC CGGATTTGGTTGTCTTCTGCTCGTGGTCAACTGAGGAGGTAAAATAATTT TCCCCTGTCCCCATTATGTTTTTTAGAAAAAGGTACACGCCTCCTAATCT GAAGATGTTCGTTCTTGCGCTCTGAAGAGCAAGGTCTATTTACCCTGTAT CTCACCGCGTCAATCGGAGTGTCCGAGCATCAACCCCGCGTGCTGTAATG GAAGTGCAACCCCGATTATTTTTATTTGCCTGGGCAATTCACTACCCGAA ACCCAGGACACATGCTTCCGCAATCCGTACACGGGTTCGAGGGCTCGGGA CTGCCGGAGAACCTGCCGTACTTCCTGACGTTGTCGGGGTACATGCTTAT TTTTTTTGTCGAGAAAATTGCATTTGATGCGCATCACATCATGAACGACG GGGGGGGGAGTCACCACCACCATGGTGGCAGCGTTAGCGCGAAGGACGAG ATGGCGGTTGTTGGCGCGGAAAGGGTGACTTCGAGCGGCCGTTCGGCGAC GATCCTCCTGGTGGCGCTGGGGGTGCACGCGCTGATGGAGACGATGGCTT TGGGGTTGAGCTCGAGCAAGCTGAGCGCTGGGCTCCTCGCCATGAGCATC GGGCTTCATCAGGTCTGGACAAAGGATAAGATCCGCGTGTTTTAACGTGT TCAGCAGGCCACAAGCACTCTGTAGCAATCTCAAACACTACTTTTTTTTA CGAAATAGTTAACCAGCCTTTTTCGGGTATTTGTATGATGACGATGTTCT TGTGGGCACGAGACCAAACGTCTGGCACGGTGAACTGACAGGACATCGGC ATTTCGACGAGCGTCCAAATCTGCCTGCTGTTCTCGCCGCAGCCCAAGCC TTCGTGACCCCGTCGCTCTTCCTGTCCGCCGTTTTCTCACCCCCCTGGCT ATGCAGCCAGCGGAGTCACTGGCACTGCTTGTGTCGTTTTTGAAGTCGGG GCTGAAAGAGAGGCAGATCATCACAATGCTTTCAGTCTTCAGCTGCATTG GACCTGTAGGTGACCCGGCATGTTGGGGGGGGGGATGATTATACAGCAAT TGGCGTGGCTTTAAGAGTCGTACACCGGCAGCGCAAGGCATGTCGTGTAC CCGTACGAGGGTTCATCTTCCGCTCCGCTCCGCCATGCGTCGTGCATAAT GGTCTAGAGCGTCCACCGTACACGGCCCCAGGGACTCCAAAAAACGCAAC ACACTAAGATGTTTGATTTCGCATGCGTAACGCCGACTCCTTCCGCCATT GGGCGTGTCGTGTTCCTCGCGTAATTGTGCCAATAAAAAAAGGGGTAGGC ATTGGGATCGCCGTCTCGGAGTTCTTCGGGCAGCTCGCGGACGCCATCAT GATAGCGCTTGCGGCAGGGACTTTTATTTACGTAGGAGCAACGGAGGTCA TCGCGGAGGAGTTCGAGACCCCAGAAAACAAGTGGAAAAAGTTCTTGGCG CTTTCAGGT
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Coding sequence (CDS) from alignment at H-elongata_contig49483:1886..3794-

>mRNA_H-elongata_contig49483.12136.1 ID=mRNA_H-elongata_contig49483.12136.1|Name=mRNA_H-elongata_contig49483.12136.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1638bp|location=Sequence derived from alignment at H-elongata_contig49483:1886..3794- (Himanthalia elongata Himel1 dioecious)
GCTTCGGCAATAGCGGGGGCGGTCGAGAACACGAGCCTCAACGTGATCAA
GGTCCTTCTGCAGATGTGCCTCACCACCATCAACGTGGTCTGCTGGCTGG
TGCCAATGAAGATTCGCAGCTTCGTGGAGTCGAAAAGGGCCATCAGCATG
GCAAATGCCTTCAGCGGTGGTATATTTCTCTCGCTAGCCTTCGGCTTCGG
CAATAGCGGGGGCGGTCGAGAACACGAGCCTCAACGTGATCAAGGTCCTT
CTGCAGATGTGCCTCACCACCATCAACGTGGTCTGCTGGCTGGTGCCAAT
GAAGATTCGCAGCTTCGTGGAGTCGAAAAGGGCCATCAGCATGGCAAATG
CCTTCAGCGGTGGTATATTTCTCTCGCTAGCCTTCGGACACATGCTTCCG
CAATCCGTACACGGGTTCGAGGGCTCGGGACTGCCGGAGAACCTGCCGTA
CTTCCTGACGTTGTCGGGGTACATGCTTATTTTTTTTGTCGAGAAAATTG
CATTTGATGCGCATCACATCATGAACGACGGGGGGGGGAGTCACCACCAC
CATGGTGGCAGCGTTAGCGCGAAGGACGAGATGGCGGTTGTTGGCGCGGA
AAGGGTGACTTCGAGCGGCCGTTCGGCGACGATCCTCCTGGTGGCGCTGG
GGGTGCACGCGCTGATGGAGACGATGGCTTTGGGGTTGAGCTCGAGCAAG
CTGAGCGCTGGGCTCCTCGCCATGAGCATCGGGCTTCATCAGGACACATG
CTTCCGCAATCCGTACACGGGTTCGAGGGCTCGGGACTGCCGGAGAACCT
GCCGTACTTCCTGACGTTGTCGGGGTACATGCTTATTTTTTTTGTCGAGA
AAATTGCATTTGATGCGCATCACATCATGAACGACGGGGGGGGGAGTCAC
CACCACCATGGTGGCAGCGTTAGCGCGAAGGACGAGATGGCGGTTGTTGG
CGCGGAAAGGGTGACTTCGAGCGGCCGTTCGGCGACGATCCTCCTGGTGG
CGCTGGGGGTGCACGCGCTGATGGAGACGATGGCTTTGGGGTTGAGCTCG
AGCAAGCTGAGCGCTGGGCTCCTCGCCATGAGCATCGGGCTTCATCAGCC
AGCGGAGTCACTGGCACTGCTTGTGTCGTTTTTGAAGTCGGGGCTGAAAG
AGAGGCAGATCATCACAATGCTTTCAGTCTTCAGCTGCATTGGACCTGTA
GCCAGCGGAGTCACTGGCACTGCTTGTGTCGTTTTTGAAGTCGGGGCTGA
AAGAGAGGCAGATCATCACAATGCTTTCAGTCTTCAGCTGCATTGGACCT
GTAGGGGTAGGCATTGGGATCGCCGTCTCGGAGTTCTTCGGGCAGCTCGC
GGACGCCATCATGATAGCGCTTGCGGCAGGGACTTTTATTTACGTAGGAG
CAACGGAGGTCATCGCGGAGGAGTTCGAGACCCCAGAAAACAAGTGGAAA
AAGTTCTTGGCGCTTTCAGGTGGGTAGGCATTGGGATCGCCGTCTCGGAG
TTCTTCGGGCAGCTCGCGGACGCCATCATGATAGCGCTTGCGGCAGGGAC
TTTTATTTACGTAGGAGCAACGGAGGTCATCGCGGAGGAGTTCGAGACCC
CAGAAAACAAGTGGAAAAAGTTCTTGGCGCTTTCAGGT
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