mRNA_H-elongata_contig49195.12103.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: A0A6H5JAS9_9PHAE (Glyco_18 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAS9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 7.030e-74 Identity = 133/237 (56.12%), Postives = 158/237 (66.67%), Query Frame = 1
Query: 19 LSIEDLLHMAELLVQEALLRSYHGFVLDIPMSDGIEEFVSAIVRTSERSGIHLLIIQSVRPMAKLSPRHIERLVPLVHRFSLMTYDY-------GAGGGW--ATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGG--TQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDR---DMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
LS DL MAELLV EA+ R Y G+VLDIP+SDGIEEFVS I R + R G L++IQSVRP LS +RLVPL+HRFSLMTYDY GA G GGVPNSP SW+RECVEA AP G G LR K L+G+PFYG N ++ + G + G + L WD +EH++SYR+R M +H ATFPTL FIQER+ LA ELGVG+A+WELG GMPY+FDLL
Sbjct: 239 LSRADLREMAELLVAEAVQRGYDGYVLDIPLSDGIEEFVSGIERAASRRGEDLILIQSVRPGVSLSAHLTDRLVPLIHRFSLMTYDYRPSDNSQGAFHGHRRGVGGVPNSPLSWVRECVEAFAPRGRGSELRAKTLIGIPFYGYDNGRAITSGDVVSLLTGGK----VLPAGLEWDSEWKEHILSYRERRAEGMQEHVATFPTLAFIQERIDLASELGVGLALWELGQGMPYWFDLL 471
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: W2LN82_PHYPR (GH18 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2LN82_PHYPR) HSP 1 Score: 126 bits (317), Expect = 9.250e-31 Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 1
Query: 16 QLSIEDLLHMAELLVQEALLRSYHGFVLDIPMSDGIEEFVSAI---VRTSERSGIHLLIIQSVRPMAKLSPRHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATF-PTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+LS ED+ + E +++ + G V +IP+ +G + + I R +++ I +L S ++ L PLVHRFS+ YD+ A G PN+P+ W+++ +E ++P RQKVLMG+PFYG N + +G T + D++ + WD + E +Y D H F P L F+Q+RL+L QE VGVA+WELG G+ +F+DLL
Sbjct: 198 RLSSEDVPIIIEKMLELVNEYKFDGMVFEIPVMEGTVDMLQQIGSAFRAADKLLILVLSRSSQEGELPVTHEIFNELAPLVHRFSMNAYDFSAPG-------PNAPYPWLKKTLEKMSPME-----RQKVLMGIPFYGYDNSDAITGSTYI----QSLKDNDVSKIRWDATAHECQHTYTTADTHSHHVVFFPCLQFLQDRLKLFQEKHVGVAIWELGQGLDFFYDLL 409
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: G4ZE89_PHYSP (GH18 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZE89_PHYSP) HSP 1 Score: 121 bits (303), Expect = 1.290e-30 Identity = 69/206 (33.50%), Postives = 111/206 (53.88%), Query Frame = 1
Query: 82 YHGFVLDIPMSDGIEEFVSAIVRTSERSG-IHLLIIQSVRPMAKLSPRH--IERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATF-PTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+ G V +IP++ G + + + R + + +L++ +L H L PLVHRFS+ YD+ A G PN+P+ W+++ +E ++P RQ++L+GLPFYG N + +G T + D++ + WD + E Y +D H F P L F+Q+RL+L +E GVGVA+WELG G+ +F+DLL
Sbjct: 10 FDGMVFEIPVTAGTLDMLQQMGRAFRAADKLLILVLSRSTNEGELPVTHELFAELAPLVHRFSMNAYDFSAPG-------PNAPYPWLKKTLEKMSPME-----RQRILLGLPFYGYDNGDAITGSTYI----QSLKDNDVSKIRWDSTAHECQHVYTAQDTGSHHVVFFPCLQFLQDRLKLYKERGVGVAIWELGQGLDFFYDLL 199
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: A0A1S3H3M1_LINUN (chitinase domain-containing protein 1-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H3M1_LINUN) HSP 1 Score: 121 bits (304), Expect = 1.620e-30 Identity = 80/233 (34.33%), Postives = 116/233 (49.79%), Query Frame = 1
Query: 7 VYFQLSIEDLLHMAELLVQEALLRSYHGFVLDIPMSDGIEEFVSAIVRTSERSGIHLLI---IQSVRPMAKLSPRHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSG---GTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+Y +L+ ++L+H ELL S + F+ E F +E + L++ + + E L P++ FSLMTYDY + G PNSP SW+R CVE L PE S R+K+L+GL FYG + G G Q ++ + P L WD S EH Y+ + H +P+L I++RL LA ELG G+++WE+G G+ YFFDLL
Sbjct: 1 MYDELTKKELVHFLELLYYIVHSLSCYYFLXXXXXXXXXEHFAEDF--HAENKKVILVLPPPLMQRNSQGMVGVEDFEALAPVMDAFSLMTYDYS--NPMSPG--PNSPLSWMRSCVETLVPE-SASPYRRKILLGLNFYGADYVPGGGGPILGQQFIEILT----KHKPKLVWDATSSEHTFQYKT-GIGSHVVYYPSLQSIKDRLDLANELGTGISIWEIGQGLDYFFDLL 221
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: UPI0003339FF0 (chitinase domain-containing protein 1 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI0003339FF0) HSP 1 Score: 125 bits (314), Expect = 1.930e-30 Identity = 78/236 (33.05%), Postives = 123/236 (52.12%), Query Frame = 1
Query: 28 EDLLHMAELLVQEALLRSYHGFVLDI------PMSDGIEEFVSAIVRTSERSGIHLLIIQSVRP--------MAKLSPRHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPE--DDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+++ + + LVQ A + + GFV+++ G+ ++ + +++ HLL++ +V P + + + E+L P++ FSLMTYDY A PN+P SW+R CV+ L P+ R K+L+GL FYG + + + V G + P L WD + EHV Y+ H +PTL +Q RL LAQELGVG+++WELG G+ YF+DLL
Sbjct: 167 DEIEELGKTLVQVAKNQHFDGFVVEVWTQLLGQKQAGLVHMLTHMAEALQQA--HLLLLLAVPPAVTPGTHQLGMFTQQEFEQLAPMLDGFSLMTYDYST----AQQPGPNAPLSWVRACVQVLDPKSKW---RSKILLGLNFYG-VDYSASRDAREPVVGSRYIQMLKEHRPQLMWDGQAAEHVFEYKRSRGGRHVVFYPTLKSVQVRLDLAQELGVGLSIWELGQGLDYFYDLL 392
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: UPI00136227DF (chitinase domain-containing protein 1 isoform X1 n=2 Tax=Hylobates moloch TaxID=81572 RepID=UPI00136227DF) HSP 1 Score: 119 bits (298), Expect = 5.040e-30 Identity = 65/161 (40.37%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 220 RHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSG-----GTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+ E+L P++ FSLMTYDY A PN+P SW+R CV+ L P+ R K+L+GL FYG S G + + +D + P + WD + EH Y+ H +PTL +Q RL+LAQELGVGV++WELG G+ YF+DLL
Sbjct: 37 KEFEQLAPVLDGFSLMTYDYST----AHQPGPNAPLSWVRACVQVLDPKSKW---RSKILLGLNFYGMDYATSKDAREPVVGARYIQTLKD----HRPRMVWDSQASEHFFEYKKSRSGRHIVFYPTLKSLQVRLELAQELGVGVSIWELGQGLDYFYDLL 186
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: D0NMM5_PHYIT (GH18 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMM5_PHYIT) HSP 1 Score: 119 bits (298), Expect = 7.150e-30 Identity = 69/206 (33.50%), Postives = 108/206 (52.43%), Query Frame = 1
Query: 82 YHGFVLDIPMSDGIEEFVSAIVRTSERSG-IHLLIIQSVRPMAKLSPRH--IERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATF-PTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+ G V +IP+ G + + I R + + +L++ +L H L PLVHRFS+ YD+ G PN+P+ W+++ +E ++P RQKVLMG+PFYG N + +G T + +D+ + WD + E +Y + H F P L F+Q+RL+L +E VGVA+WELG G+ +F+DLL
Sbjct: 10 FDGMVFEIPVMQGTVDMLQHIGRAFRAADKLLILVLSRSSKEGELPVTHEIFNELAPLVHRFSMNAYDFSMPG-------PNAPYPWLKKTLEKMSPME-----RQKVLMGIPFYGYDNRDAITGSTYI----QSLTDNEVSKIRWDATAHECQHTYTAVETNSHHVVFFPCLQFLQDRLKLYKEKHVGVAIWELGQGLEFFYDLL 199
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: A0A670IDC8_PODMU (Chitinase domain containing 1 n=5 Tax=Lacertinae TaxID=162266 RepID=A0A670IDC8_PODMU) HSP 1 Score: 124 bits (310), Expect = 7.500e-30 Identity = 79/225 (35.11%), Postives = 116/225 (51.56%), Query Frame = 1
Query: 55 LVQEALLRSYHGFVLDIPMSDGIEE---FVSAIVRTSE-----RSGIHLLIIQSVRP----MAKLSPRHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPE--DDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
L+Q A ++ GFV ++ G ++ + + SE R + L+I +V P + + + ++L P+V FSLMTYDY A PNSP W+R CV+ L PE R K+L+GL FYG + + S + + G + + + P L WD EH Y+ H +PTL IQ RL+LA+ELG G+A+WELG G+ YF+DLL
Sbjct: 178 LIQIAKNENFDGFVAEVWSQLGNQKQTGLIHLLTHLSEALHQVRLKLMLVIPPTVMPGTNQLGSFTKKEFDQLAPIVDSFSLMTYDYSAPQRPG----PNSPLPWMRACVQMLDPEAKW---RSKILLGLNFYG-MDYSALSASGEPIIGNKYIEILKEHKPKLVWDEQIAEHYFEYKKSKGGKHAVFYPTLKSIQLRLELAKELGTGIAIWELGQGLDYFYDLL 394
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: A0A0P1AEY4_PLAHL (Ca2: cation antiporter family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEY4_PLAHL) HSP 1 Score: 124 bits (310), Expect = 9.950e-30 Identity = 72/206 (34.95%), Postives = 108/206 (52.43%), Query Frame = 1
Query: 82 YHGFVLDIPMSDGIEEFVSAIVRTSERSG-IHLLIIQSVRPMAKLSPRH--IERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQAVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATF-PTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+ G V +IP+ +G + + I R + + +L++ +L H L PLVHRFS+ YDY G PN+P++W+ + ++ ++P RQKVLMGLPFYG N + +G T + S++ + WD + E SY H F P L F+Q+RL+L +E VGVA+WELG G+ YF+DLL
Sbjct: 224 FDGIVFEIPVQEGTVDMLQQIGRAFRAANKLLILVLSRCSQEGELPVTHEMFNELAPLVHRFSINAYDYSMPG-------PNAPYTWLEKTLKNMSPME-----RQKVLMGLPFYGYDNTDAITGSTYI----QSLSENEISEIRWDAKAHECHHSYSAAQTRSHHVVFYPCLQFLQDRLKLFREQHVGVAIWELGQGLEYFYDLL 413
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Match: UPI0018D61A7A (chitinase domain-containing protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D61A7A) HSP 1 Score: 123 bits (309), Expect = 1.060e-29 Identity = 78/217 (35.94%), Postives = 110/217 (50.69%), Query Frame = 1
Query: 76 RSYHGFVLDIPMSDG------IEEFVSAIVRTSERSGIHLLIIQSVRPMAK----LSPRHIERLVPLVHRFSLMTYDYGAGGGWATGGVPNSPFSWIRECVEALAPEGSGEGLRQKVLMGLPFYGETNLKSFSGGTQ---AVDGPEDDSDSNTPSLYWDLMSREHVISYRDRDMVDHRATFPTLTFIQERLQLAQELGVGVAVWELGHGMPYFFDLL 687
+S+ G VL++ G ++ V I S + L+++ MA S + L P+V FSLMTYDY + A PNSP W+R CV+ +AP+ + R K+L+GL FYG + G Q A+ GP L W+ EHV Y+ H+ +P+L IQ RLQLAQELG G+++WELG G+ YF+DLL
Sbjct: 190 QSFDGIVLEVWSQLGGQAKTELQHLVVDIADAMHNSHMKLVLVIPPPVMASGPGMFSSSDFKTLYPVVDEFSLMTYDYSS----AQSPGPNSPIDWVRSCVKEIAPDNEADQ-RSKILLGLNFYG------YDYGPQSAEAIIGPRYLDLLKKHKLKWNTAQAEHVFDYKKDGPWVHQVYYPSLKSIQVRLQLAQELGTGISIWELGQGLDYFYDLL 395 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49195.12103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49195.12103.1 >prot_H-elongata_contig49195.12103.1 ID=prot_H-elongata_contig49195.12103.1|Name=mRNA_H-elongata_contig49195.12103.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp MCVYFQLSIEDLLHMAELLVQEALLRSYHGFVLDIPMSDGIEEFVSAIVRback to top mRNA from alignment at H-elongata_contig49195:10..2320+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49195.12103.1 ID=mRNA_H-elongata_contig49195.12103.1|Name=mRNA_H-elongata_contig49195.12103.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2311bp|location=Sequence derived from alignment at H-elongata_contig49195:10..2320+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49195:10..2320+ >mRNA_H-elongata_contig49195.12103.1 ID=mRNA_H-elongata_contig49195.12103.1|Name=mRNA_H-elongata_contig49195.12103.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig49195:10..2320+ (Himanthalia elongata Himel1 dioecious)back to top |