mRNA_H-elongata_contig49178.12101.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A6H5JXF8_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF8_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 4.000e-168 Identity = 216/259 (83.40%), Postives = 241/259 (93.05%), Query Frame = 1
Query: 28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARRALTN 804
WPAL++WT+ L A HGDLRLHAGGLEFALKDYLRYA ES+DELPLYVFDK+FVDKCP LGR+Y VP+VF DDLFSVLG+++RPD+RWLIAGPARSGSSFHVDPNCTSAWNAT+SG+KKW+MFPPG+TPPGVHPSEDGLDLAAPVS+ EWFLNFYEECH PGR VRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLP V++FLLTQKHLISGLPPDQR DLGERF++A++ +RPDLG EIA RA ++
Sbjct: 7 WPALEKWTRSRLSAAHGDLRLHAGGLEFALKDYLRYARESKDELPLYVFDKRFVDKCPDLGREYDVPSVFADDLFSVLGEERRPDYRWLIAGPARSGSSFHVDPNCTSAWNATVSGRKKWIMFPPGETPPGVHPSEDGLDLAAPVSITEWFLNFYEECHAPGRRVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPHVVKFLLTQKHLISGLPPDQRDDLGERFVTAMSEQRPDLGVSEIAERATSS 265
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: D8LEI9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI9_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 1.430e-164 Identity = 217/271 (80.07%), Postives = 243/271 (89.67%), Query Frame = 1
Query: 1 IVSCPRSLSWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARRALTNAAA 813
+V + SWPAL++WT+ L A HGDLR+HAGGLEFALKDYLRYA ES+DELPLYVFDK+FVDKCP LGR+Y VP+VF DDLFSVLG+++RPDHRWLIAGPARSGSSFHVDPNCTSAWNAT+SG+KKW+MFPPG+TPPGVHPSEDGLDLAAPVS+ EWFLNFYEECH P R VRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLP V++FLLTQKHLISGLPPDQR DLGE F++A++ +RPDLG EIA RA + A
Sbjct: 199 VVLTDAAASWPALEKWTRSRLSAAHGDLRVHAGGLEFALKDYLRYARESKDELPLYVFDKRFVDKCPDLGREYDVPSVFADDLFSVLGEERRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGRKKWIMFPPGETPPGVHPSEDGLDLAAPVSITEWFLNFYEECHAPTRRVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPHVVKFLLTQKHLISGLPPDQRDDLGESFVTAMSEQRPDLGVSEIAERATASTTA 469
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A835YQR8_9STRA (JmjC domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR8_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.970e-102 Identity = 151/245 (61.63%), Postives = 181/245 (73.88%), Query Frame = 1
Query: 28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERP 762
W A W + + HGDL +HAGG+EF L+DYL YA+ +RD++PLYVFDK+F K P LGR + VP F DDLF +LG++ RPD+RWLI GPARSGSSFHVDPN TSAWNA + G+KKWV+FPP PPGVHPS DG+DL APVS+MEWFLNFY+ + LECVVSAGEVVFVP GWWHCVLNL+++VAITQNFVSRVNL V+ FL + +SGLPP R L F++AL P
Sbjct: 204 WRAHGTWGRSYFNSAHGDLSVHAGGVEFKLRDYLEYADATRDDMPLYVFDKRFAAKAPELGRAFGVPPQFADDLFGLLGEN-RPDYRWLIMGPARSGSSFHVDPNQTSAWNAVLEGRKKWVLFPPNCPPPGVHPSSDGMDLVAPVSVMEWFLNFYDAAKRQRNGM--LECVVSAGEVVFVPRGWWHCVLNLDFTVAITQNFVSRVNLAPVLSFLRRRPDNVSGLPPALRPRLHADFVAALRERAP 445
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A5B8MUQ5_9CHLO (JmjC domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUQ5_9CHLO) HSP 1 Score: 298 bits (764), Expect = 3.020e-94 Identity = 136/247 (55.06%), Postives = 178/247 (72.06%), Query Frame = 1
Query: 28 WPALQRWTQGELLAE--HGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERP 762
WPA ++W E + + G+ +H GG +F+++ Y Y + + DE+PLY+FDKKF +K P L DY+VP+ F +DLF VLG +RPD+RWLI GPARSGSSFH DPNCTSAWNA ++G+KKW+MFPP PPGVH SE+ L +A VSL+EWFLNFY++ + V P ECVV AGEV+FVP GWWH V+NLE SVA+TQNFVS NL V++++ L+SG P +QR L ERF+ A+ +RP
Sbjct: 221 WPAYEKWRNREYILDAFEGET-VHVGGYQFSMEQYYEYTDNTNDEMPLYLFDKKFAEKSPKLAGDYTVPSYFAEDLFQVLGPGERPDYRWLIIGPARSGSSFHKDPNCTSAWNAVLTGRKKWIMFPPHVMPPGVHASENELHVATSVSLIEWFLNFYQQTKE--CEVAPRECVVEAGEVIFVPRGWWHLVVNLEESVALTQNFVSSANLKHVLKYI-KDAELVSGCPLEQRASLHERFVQAMKEQRP 463
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: M4BBI9_HYAAE (JmjC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBI9_HYAAE) HSP 1 Score: 296 bits (758), Expect = 9.290e-94 Identity = 133/250 (53.20%), Postives = 172/250 (68.80%), Query Frame = 1
Query: 28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAE 777
W A+ +WT L G AGG +F L++YL YA +D+ PL++FDKKF K L RDY+VP F DD F+ LG+ +RPD+RWLI GPA+SGSSFH+DPN T+AWN I G+KKW+MFPPGQ PPG+HPSEDG +++APVSLMEWF+ FY+ C ++PLE + GEV+FVP GWWH VLN+E S+A+TQNFVS N+ V+ F + +SG P DQR +LG F LA P+L A+
Sbjct: 148 WSAMTKWTDKYLEDVCGSTTFDAGGFQFPLEEYLNYARTLQDDQPLFIFDKKFAGKVSQLARDYTVPKYFCDDYFAFLGEARRPDYRWLIIGPAKSGSSFHIDPNATNAWNGVIRGRKKWIMFPPGQVPPGIHPSEDGSEVSAPVSLMEWFMTFYKTCQKLPAHLKPLEGICREGEVMFVPHGWWHTVLNIEESIAVTQNFVSSCNVKSVLAFFDEKPDQVSGCPIDQRQELGRLFRDVLARNVPELFAK 397
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A484EC20_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC20_BRELC) HSP 1 Score: 294 bits (752), Expect = 1.320e-92 Identity = 129/253 (50.99%), Postives = 174/253 (68.77%), Query Frame = 1
Query: 25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEI 783
+WPA++ WT + +AGG +F++ YL Y RD+ PL++FDK F K P L DYSVP F +D F++LG+++RPDHRWLI GP ++GSSFH+DPN T+AWN+ I G KKW+MFPPGQ PPG+HPS+DG ++++PVSLMEWF+ FY++ + +PLE + GE VFVP GWWH VLN++ S+AITQNFVS N+ V F+ Q L+SG P +QR LGE F A+A PD+ A+ I
Sbjct: 215 NWPAMKNWTDEYFIRVCKGKTFYAGGFQFSMDKYLSYCRALRDDQPLFIFDKDFAAKVPQLANDYSVPIYFQEDYFALLGENERPDHRWLIIGPKKAGSSFHIDPNATNAWNSVIRGAKKWIMFPPGQVPPGIHPSDDGSEVSSPVSLMEWFVTFYKDVENLPSHRKPLEGICREGETVFVPHGWWHTVLNIDESIAITQNFVSSGNVRSVFEFITEQPELVSGCPREQRCKLGEMFRDAMAKSAPDMYAKVI 467
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A2G2VVE0_CAPBA (JmjC domain-containing protein n=5 Tax=Capsicum TaxID=4071 RepID=A0A2G2VVE0_CAPBA) HSP 1 Score: 292 bits (747), Expect = 1.070e-91 Identity = 138/248 (55.65%), Postives = 180/248 (72.58%), Query Frame = 1
Query: 25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKH--LISGLPPDQRGDLGERFISALAAERP 762
+WPAL++W + L+ + GD+R G +E L+DY RYA++ R+E PLY+FD KF +K P LG+D+ VP F +DLFSVLG+ +RPD+RW+I GPA SGSSFH+DPN TSAWNA I G KKW++FPP PPGVHPS DG ++A+PVS+MEWF+NFY + + RP+ECV AGEV+FVP GWWH V+NLE S+AITQNFVSR NL +V+ FL L+SG R +L ++F SA+ A P
Sbjct: 214 NWPALEKWNREYLIEKCGDVRFSVGPVEMKLEDYFRYADQVREERPLYLFDPKFAEKVPQLGKDFDVPIFFNEDLFSVLGN-ERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWILFPPDVVPPGVHPSPDGAEVASPVSIMEWFMNFYNATKNLKK--RPIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKRPNACTLVSGT--SDRVNLHDKFKSAIEAYLP 456
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A3F2RLN6_9STRA (JmjC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLN6_9STRA) HSP 1 Score: 294 bits (753), Expect = 2.420e-91 Identity = 129/250 (51.60%), Postives = 173/250 (69.20%), Query Frame = 1
Query: 28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAE 777
WPA+++WT G L L +AGG +FA+ Y +YA D+ PL+VFDK+F K P L DY+VP F +D F++LG++ RP++RWLI GP +SGS FH+DPN T+AWN I G KKW+MFPPGQ PPG+HPSEDG +++APVSLMEWF+ FY+E ++PLE + GE +FVP GWWH VLN+E SVA+TQNFVS N+ V++FL + +SG P +QR LG F ++ + PDL A+
Sbjct: 291 WPAMEKWTDGYLAEVCNGLTFYAGGFQFAMDKYFKYARTLVDDQPLFVFDKEFAAKVPQLAEDYTVPKYFQEDYFALLGEENRPNYRWLIIGPKKSGSGFHIDPNATNAWNGVIRGSKKWIMFPPGQVPPGIHPSEDGSEVSAPVSLMEWFVTFYKEVQKLPAHLKPLEGICREGETMFVPHGWWHTVLNIEESVAMTQNFVSSGNVKSVLQFLTEKPDQVSGCPTEQRPKLGGMFRDVMSKQAPDLFAK 540
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A250XF21_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XF21_9CHLO) HSP 1 Score: 291 bits (744), Expect = 4.830e-91 Identity = 138/256 (53.91%), Postives = 178/256 (69.53%), Query Frame = 1
Query: 28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLT-QKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARR 792
WPAL++W+ L + AG E YL+Y + + DE+PLY FDK F K P L D+SVP F DDLFSVLG++ RPD+RW+I GP+RSGSSFHVDPNCTSAWNA I+G+KKW+++PP PPGVH S D D+A P+SL+EWF+NFYEE G+ V+P+ECVVS GE++FVP GWWH +NLE +AITQNFVSR NLP V+ +L + L+SG R L +RF++ALA P++ E A+R
Sbjct: 209 WPALKKWSLPYLSKVFQGKTIVAGNYEMPFDTYLKYWDSNHDEMPLYFFDKTFCIKAPQLQNDFSVPEYFSDDLFSVLGEEGRPDYRWMIMGPSRSGSSFHVDPNCTSAWNAVITGRKKWILYPPHVEPPGVHASPDRADVATPLSLVEWFMNFYEEAQ-VGK-VKPIECVVSPGELIFVPRGWWHMAINLEPGIAITQNFVSRTNLPHVLSYLKPGRSDLVSGCALHDRASLHDRFVAALAERCPEVLKELEAKR 462
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A1S4DJP0_TOBAC (F-box protein At5g06550-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4DJP0_TOBAC) HSP 1 Score: 290 bits (741), Expect = 1.360e-90 Identity = 137/248 (55.24%), Postives = 179/248 (72.18%), Query Frame = 1
Query: 25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKH--LISGLPPDQRGDLGERFISALAAERP 762
SWPAL++W + L E GD++ G +E L+DY Y++++R+E PLY+FD KF +K P LG+DY VP F +DLFSVLG+ +RPD+RW+I GPA SGSSFH+DPN TSAWNA I G KKWV+FPP PPGVHPS DG ++A+PVS++EWF+NFY + + RP+ECV AGEV+FVP GWWH V+NLE S+AITQNFVSR NL +V+ FL L+SG R +L ++F +A+ A P
Sbjct: 231 SWPALEKWNRDYLAEECGDVKFSVGPVEMKLEDYFSYSDQAREEKPLYLFDPKFAEKVPQLGKDYDVPMYFNEDLFSVLGN-ERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVHPSPDGAEVASPVSIIEWFMNFYNATKNWKK--RPIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKKPNACTLVSGT--SDRVNLHDKFKNAIEAYLP 473 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49178.12101.1 >prot_H-elongata_contig49178.12101.1 ID=prot_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp IVSCPRSLSWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRback to top mRNA from alignment at H-elongata_contig49178:761..4116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49178.12101.1 ID=mRNA_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3356bp|location=Sequence derived from alignment at H-elongata_contig49178:761..4116- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49178:761..4116- >mRNA_H-elongata_contig49178.12101.1 ID=mRNA_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2148bp|location=Sequence derived from alignment at H-elongata_contig49178:761..4116- (Himanthalia elongata Himel1 dioecious)back to top |