mRNA_H-elongata_contig4908.12085.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: D7FHW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHW3_ECTSI) HSP 1 Score: 493 bits (1269), Expect = 1.250e-150 Identity = 361/851 (42.42%), Postives = 441/851 (51.82%), Query Frame = 2
Query: 920 ALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQLDIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFLGQRYDWAKKCPDVVVAIRENKRRQRESPTALSTKAVLDALCEARAEDKLVGSPLDPATADDLAYELGVTAESLVRSVHRRTLELIRERGTRGRLRGIGSSIRGFGRAGGDPQVSRPGRFLGN-MEGKGGSG-----------------------------------------------VSAGGSSFSTLGRDSSAN----------LCLDSDRSSSSIDSPPPLTV----AYAQGESRDVAPLATVGDRANGTSSAVTGPGKSKSISNGMGKTNNQRQEVLGGNFKAFTSSSG-SRRRVVEISTPVKLTPHKRRGEKKSSQIKRHGSG------------------------------------REDALRLALARAEPPDTTADTKAATT---HKNAPMLDTLSTSSPNL---------MTECCRSGDRRAACSPSRSNEGASTXXXXXSSQRETDKNL-----------TLLETRKRSVRAVFEVADEMKAQIKVRDRVYRFRVYPDCFSGREAVQWMLDRCHASSVDEAEKLGNEMMRASVFQHILNSQVFEDSALYYQFTDGVTPPPPAKGGRRLRQVARVWGGHVARKFVQNGGAGSGSGGMLEPRVLQKINTANSTSASKRFPAARERVAIVGEGGGDSSKATIMSSFQIPVDMSVKNLPKLPKSSSTDRKKHRRSRRHSTGKCKGQLRRFSSSVSTVTAPETPH 3106
ALDF+H+ GRVHRDVKPAN+LITR GD+KLGDFGAAGVENSSRMVGTQRFMAPERLKGHRA+ QSDLWSLGLSLATAA GD FISQ +N+F QLD+A R L++ TT+S EL +FLH CLSRDPARRPALR+LMKHPFL QR +W KCP+V +A+++ KR Q +A+ + VLDALC RAE+ L+G+ DPATA DLAYELGVT +SLVR VHRRTLE IRERG G G G VS G G+ M + G V GG R+ S + D + ++D P T + + + PL T DR T TG G G GG SS+ SRRR +E+S VKLTPHKRRGE+K+SQ KR+GS +E A + A AE + T H+ + + P +G A PS + T S +R+ +N + + R RS+R VF++ADEMKAQI VRDRV+R RVYP CFSGREAVQWMLD CHASSV EAE +GNEMM+ASVFQHILNS VFEDS++YYQFTDG TPPPP++G RRLRQ+ARV GGHVAR+ V +GG G+GG+ + + N + + + A+R G SK RRSR + QLRRFSSS+ST+T PETP+
Sbjct: 2 ALDFVHSCGRVHRDVKPANLLITRNGDLKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRATAQSDLWSLGLSLATAAFGDDFISQGSNQFVQLDMACRVRRRLSKTTTLSAELMDFLHSCLSRDPARRPALRDLMKHPFLSQRQNWQAKCPEVALAMQDRKRLQSGDVSAI--EEVLDALCHVRAEENLIGTSFDPATAADLAYELGVTTDSLVRDVHRRTLEFIRERGG-----GSGXXXXXSGSLSSSGGVSDSGDENGDEMRSRDSDGGEDRWRTISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTREERPVHRGGEGR----REESCSPRXXXXXXXXXXXXXDALTLAMDMIPTATREGDGSIPRSGGNNAYPLVTPRDRP--TRGGATG---------GAG---------FGGRHSTVVSSNTRSRRRALEMSPAVKLTPHKRRGERKASQTKRNGSSCVANGTRRAGRGXXXXXXXXXXXXXTEPETSISGSPQEQATEVVTAAAETAVEGLYARVTGTDRDHQRFREAGAATVAGPGAGHVGAAAXXXXXXXSAGITAADGLPSCRDNLVHTAACRRSWERKCKRNSRPRTASSRTLPSRADVRTRSMRGVFQLADEMKAQIAVRDRVHRLRVYPRCFSGREAVQWMLDGCHASSVMEAENIGNEMMKASVFQHILNSHVFEDSSVYYQFTDGDTPPPPSRGSRRLRQIARVVGGHVARRLVPSGG---GAGGIGAADCICPVAPGNGSGLANQHQASRP--------GDRGSKVK------------------------------RRSRGRGSQSVL-QLRRFSSSMSTLTVPETPY 779
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: D7FHW2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW2_ECTSI) HSP 1 Score: 262 bits (669), Expect = 5.900e-76 Identity = 151/217 (69.59%), Postives = 170/217 (78.34%), Query Frame = 2
Query: 338 PRALNERRATGPPT----------AEQTGMA---ILGSLDSALPPKSERRVSLRKPPRQLSLGQDPLPASPLISTRNLVPGLSYSVVKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPRIVDFYGSTVQENGNACIAVEYVAGGSLGSWLD-SGCE-CPEAWIAHIAHQALEALD-FLHT 940
PR + R PPT AE+ G+ +LGS+DS LPPKS RR SLR+P RQLSLG+ PLPASPLISTRNLVPGLS SVV+LD+LGKGATSNVF AVH A+LKMVALKEV VS DA R AVRTEMRAL+TQRSPLLNSTFTT+L CPRIVD+YGS V+ENGNACIAVEYVAGGSL +WL+ SG CPE W AHI HQALE+ D ++HT
Sbjct: 18 PRRSSSRLDFNPPTSAQRRGQLAAAEERGVGTTMLLGSMDSCLPPKS-RRTSLRRPLRQLSLGE-PLPASPLISTRNLVPGLSESVVQLDILGKGATSNVFLAVHAATLKMVALKEVTVSNDADRWAVRTEMRALKTQRSPLLNSTFTTKLASCPRIVDYYGSVVRENGNACIAVEYVAGGSLENWLENSGASVCPEPWFAHITHQALESGDLWMHT 232
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A836C8E3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E3_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.070e-75 Identity = 136/262 (51.91%), Postives = 179/262 (68.32%), Query Frame = 2
Query: 557 VKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPRIVDFYGSTVQENGNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQLDIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFL 1342
+KL LGKGA+S+V+ AV +L +VALKE + T A R AVR+E++ALRTQRSPL++ +F + P IV FYG + + A +AVE VAGGSL +++D G PE W+AH+AH L AL LH GR HRD+KPAN LIT +GD KL DFG A + RMVGT+R++ PE LKG P+SD+WS GL++A AA D ++QA NEFEQL A RT +AQ ISP+LR+FL CL +P+ R ++ EL++HPFL
Sbjct: 1 LKLQRLGKGASSSVYMAVCVRTLAVVALKESPIRTAADRDAVRSELQALRTQRSPLMDRSFVGDDTASPHIVRFYGGVMLQERTAVLAVELVAGGSLQAFIDRGSPAPEPWLAHVAHSCLLALQTLHENGRTHRDIKPANCLITCEGDAKLADFGCASGDLGRRMVGTRRYLPPEVLKGEAVLPKSDVWSFGLTMAAAACADPPVAQAQNEFEQLQAAERVRTTIAQLHNISPQLRDFLSLCLVVNPSERASIAELLEHPFL 262
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A6H5L7B9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B9_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.660e-73 Identity = 137/175 (78.29%), Postives = 151/175 (86.29%), Query Frame = 2
Query: 401 ILGSLDSALPPKSERRVSLRKPPRQLSLGQDPLPASPLISTRNLVPGLSYSVVKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPRIVDFYGSTVQENGNACIAVEYVAGGSLGSWLD-SGCE-CPEAWIAHIAHQALE 919
+LGS+DS LPPKS +R SLR+P RQLSLG+ PLPASPLISTRNLVPGLS SVV+LD+LGKGATSNVF AVH A+LKMVALKEV VS DA R AVRTEMRAL+TQRSPLLNS FTT+L CPRIVD+YGS V+ENGNACIAVEYVAGGSL +WL+ SG CPE W AHI HQALE
Sbjct: 2 LLGSMDSCLPPKSRKR-SLRRPLRQLSLGE-PLPASPLISTRNLVPGLSESVVQLDILGKGATSNVFLAVHAATLKMVALKEVTVSNDADRWAVRTEMRALKTQRSPLLNSAFTTKLASCPRIVDYYGSVVRENGNACIAVEYVAGGSLENWLENSGASVCPEPWFAHITHQALE 174
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A835Z6W9_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W9_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.430e-55 Identity = 99/193 (51.30%), Postives = 131/193 (67.88%), Query Frame = 2
Query: 767 IVDFYGSTVQENGNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAAGVENSSRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQLDIAGSARTMLA-QATTISPELRNFLHRCLSRDPARRPALRELMKHPFL 1342
IV FYG C+A+EYV GGSL +W+D PE W+AHI+HQ L AL +LH+ GR H DVKPAN+L+TR+GD KL DFG A + M+GT+R+MAPERLKG + P+SD+WS GL++A AAL + ++QA+NEF+Q+ R +A Q +SPELR+FL CL DPA R + L++HPFL
Sbjct: 1 IVKFYGCYTPVAHTVCLAMEYVGGGSLQAWIDRHAAAPEPWLAHISHQCLLALQYLHSCGRAHCDVKPANVLVTREGDAKLADFGCASSSVARTMLGTRRYMAPERLKGEQVVPESDVWSFGLAMAAAALAECPVAQAHNEFDQVHEGERVRGFIAAQHGALSPELRDFLCACLEPDPAARAGVAALLRHPFL 193
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: F0WJK7_9STRA (Serine/threonine protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJK7_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.220e-39 Identity = 101/273 (37.00%), Postives = 153/273 (56.04%), Query Frame = 2
Query: 557 VKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTE---LKPCPRIVDFYGSTVQEN-GNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAA-----GVENSSRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQLDIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFLGQ 1348
+KL +LG+GA+ V + +H SL +VA+K++ V A R + TE++ L S L + + T L PCP IV Y + + N G I VEY+ GGSL +DSG E +A+IA L L LH ++HRD+KP+N+LI G+VK+ DFG A + ++ VGT +M+PER+ S +SD+WSLGLSL T ALG+ S N +E L + + + S R+F+ +CL+++ R +++L+ HPF+ Q
Sbjct: 102 IKLSVLGRGASGVVHKVIHLPSLMLVAIKDIPVYECAKRHQLITEIKTLYNNLSTLSDESTTKAPRTLAPCPEIVCLYDAFMNPNEGYVSIVVEYMDGGSLQDIVDSGGCKSERVLANIAQCVLRGLSHLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREMEDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSLLTCALGEFPYSSRNGYWELLHKIRNEPPPILPRGSFSVTFRDFMEKCLAKNEVERWNVKQLLDHPFIKQ 374
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A485LIV7_9STRA (Aste57867_21936 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIV7_9STRA) HSP 1 Score: 162 bits (410), Expect = 4.470e-37 Identity = 104/272 (38.24%), Postives = 159/272 (58.46%), Query Frame = 2
Query: 554 VVKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPRIVDFYGSTVQEN-GNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAAG-VENS----SRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQL-DIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFLGQ 1348
++KL +LGKGA+ V +A+H SL +VA+K + V + R + EM+ L + L + ++ CP IV Y + + N GN I VEY+ GGSL +D+G E+ +A+I+++ L+ L +LH ++HRD+KP+N+LI GDVK+ DFG A +ENS + VGT +M+PER+ S +SD+WS GLS+ T ALG +Q +E L I + L T S E R+FL +CL +D R +++EL++H FL +
Sbjct: 344 LIKLGVLGKGASGVVHKALHVPSLLLVAVKVIPVFENEKRHQLIAEMKTLYNNLASLSDEAERRKVA-CPEIVCLYDAFMNPNEGNVSIVVEYMDGGSLQDIVDTGGCTSESVLANISYRVLKGLRYLHEIHQLHRDIKPSNLLINHFGDVKVSDFGIAKEMENSIAKATTFVGTLTYMSPERIASEAYSYKSDVWSFGLSIMTCALGHYPYTQRGGYWELLHSIRNESPPKLPTDTDFSSEFRDFLAKCLIKDQNERWSVKELLEHDFLRE 614
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A024G2F5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2F5_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.500e-36 Identity = 100/273 (36.63%), Postives = 155/273 (56.78%), Query Frame = 2
Query: 557 VKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELK---PCPRIVDFYGSTVQEN-GNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAA-----GVENSSRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQLDIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFLGQ 1348
+KL +LG+GA+ V +A+H SL +VA+K++ V A R + E++ L S L + T L+ PCP I+ Y + + N G I VEY+ GGSL +DSG E +A+IA L+ L +LH ++HRD+KP+N+LI G+VK+ DFG A + ++ VGT +M+PER+ S +SD+WSLGLS+ T ALG S N +E L + + + S R+F+ +CL+++ A R +++L+ HPF+ Q
Sbjct: 591 LKLGVLGRGASGVVHKAIHLPSLMLVAIKDIPVYECAKRHQLIAEIKTLYDNLSTLSDDNTTKALRTLAPCPEILCLYDAYMNPNEGYVSIVVEYMDGGSLQDIVDSGGCNSELVLANIARCVLKGLSYLHNKHQLHRDIKPSNLLINHFGEVKISDFGIAREMEDSMAKATTFVGTLTYMSPERIASEEYSYKSDVWSLGLSILTCALGKFPYSSKNGYWELLHKIRNEPPPMLPKDSFSNTFRDFMAKCLAKNEAERWTVQQLLLHPFVRQ 863
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: W4GT93_9STRA (STE/STE7 protein kinase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GT93_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.340e-36 Identity = 102/272 (37.50%), Postives = 157/272 (57.72%), Query Frame = 2
Query: 554 VVKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPRIVDFYGSTVQEN-GNACIAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFGAAG-VENS----SRMVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFISQANNEFEQL-DIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFLGQ 1348
++KL +LGKGA+ V +A+H SL +VA+K + V + R + EM+ L + L + ++ CP IV Y + + N GN I VEY+ GGSL +D+G E +A+I+++ L+ L +LH ++HRD+KP+N+LI GDVK+ DFG A +ENS + VGT +M+PER+ S +SD+WS GLS+ T ALG + +E L I L T SP+ ++FL +CL +D R +++EL++H FL +
Sbjct: 350 LIKLGVLGKGASGVVHKALHVPSLLLVAVKVIPVFENDKRHQLIAEMKTLYNNLASLSDDAERRKVA-CPEIVCLYDAFMNPNEGNVSIVVEYMDGGSLQDIVDTGGCTSEPVLANISYRVLKGLRYLHEIHQLHRDIKPSNLLINHFGDVKVSDFGIAKEMENSIAKATTFVGTLTYMSPERIASEAYSYKSDVWSFGLSIMTCALGHYPYTSKGGYWELLHSIRNEQPPKLPLGTDFSPDFQDFLAKCLIKDQNERWSVKELLEHDFLRE 620
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Match: A0A835YL65_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL65_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.610e-35 Identity = 103/288 (35.76%), Postives = 153/288 (53.12%), Query Frame = 2
Query: 542 LSYSVVKLDMLGKGATSNVFRAVHTASLKMVALKEVIVSTDAGRKAVRTEMRALRTQRSPLLNSTFTTELKPCPR-----------IVDFYGSTVQENGNAC-IAVEYVAGGSLGSWLDSGCECPEAWIAHIAHQALEALDFLHTGGRVHRDVKPANILITRKGDVKLGDFG------AAGVENSSR--MVGTQRFMAPERLKGHRASPQSDLWSLGLSLATAALGDGFIS-QANNEFEQLDIAGSARTMLAQATTISPELRNFLHRCLSRDPARRPALRELMKHPFL 1342
+S ++V+L LG GA+ V++ VH +L+++A+KEV V R+ + E+RAL + +V F+ + +G A I +EY AGGSL + A +A +A AL L +H G +HRD+KP+N+L+ +G VKL DFG AA +E ++ VGT +M+PERL+G S SD+WSLGLSL T ALG ++ +N + L + + A +SP LR+FL L RDPARRP++ +L+ HPFL
Sbjct: 1 MSGNIVRLGDLGHGASGAVYKGVHACTLRLLAVKEVPVRDKGQRQQIGAEIRALSSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVAFHDAFTSADGGAVSIVMEYCAGGSLQDVAAAAGALDAATLASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPLNVPKSNLYWHL-----MKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4908.12085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4908.12085.1 >prot_H-elongata_contig4908.12085.1 ID=prot_H-elongata_contig4908.12085.1|Name=mRNA_H-elongata_contig4908.12085.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=905bp MAILGSLDSALPPKSERRVSLRKPPRQLSLGQDPLPASPLISTRNLVPGLback to top mRNA from alignment at H-elongata_contig4908:1797..11225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4908.12085.1 ID=mRNA_H-elongata_contig4908.12085.1|Name=mRNA_H-elongata_contig4908.12085.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9429bp|location=Sequence derived from alignment at H-elongata_contig4908:1797..11225+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4908:1797..11225+ >mRNA_H-elongata_contig4908.12085.1 ID=mRNA_H-elongata_contig4908.12085.1|Name=mRNA_H-elongata_contig4908.12085.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5430bp|location=Sequence derived from alignment at H-elongata_contig4908:1797..11225+ (Himanthalia elongata Himel1 dioecious)back to top |